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Dietary iron intake predicts all-cause and cardiovascular mortality in patients with diabetes. 膳食铁摄入量可预测糖尿病患者的全因死亡率和心血管死亡率。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-23 DOI: 10.1038/s41387-024-00286-2
Chenchen Yang, Tingting Hu, Chenglin Li, Aifeng Gong

Background: Limited data exists on the link between dietary iron intake and mortality in diabetes. Our investigation aimed to explore how dietary iron intake correlates with overall and cause-specific mortality in diabetic individuals.

Methods: This analysis encompassed 5970 participants with diabetes from the National Health and Nutrition Examination Survey spanning 1999 to 2014. Baseline data were collected through surveys and examinations, with mortality status tracked via National Death Index records until December 31, 2015. Cox proportional hazard models were utilized to calculate hazard ratios (HR) and 95% confidence intervals (CI) for mortality from various causes, including cardiovascular disease (CVD) and cancer.

Results: The average iron intake among the cohort was 14.1 ± 7.4 mg daily, with an average participant age of 61.3 and 3059 (51.3%) male adults. Over 41,425 person-years of follow-up, 1497 deaths were recorded. Following adjustments for multiple variables, an iron intake between 11.1 and 14.4 mg was associated with the lowest risk of all-cause mortality (HR 0.83 [0.70, 0.99], P < 0.05) compared to the reference group (<8.3 mg). Analysis of dose-response curves revealed an L-shaped pattern in men and a J-shaped pattern in women concerning the relationship between iron intake and all-cause mortality.

Conclusions: Our findings suggest a nonlinear association between dietary iron intake and all-cause mortality in individuals with diabetes. Specifically, higher iron intake may increase all-cause mortality risk in men, while potentially exert a protective effect in women.

背景:有关糖尿病患者膳食铁摄入量与死亡率之间关系的数据有限。我们的调查旨在探讨膳食铁摄入量与糖尿病患者总体死亡率和特定病因死亡率之间的相关性:这项分析涵盖了 5970 名糖尿病患者,这些患者来自 1999 年至 2014 年的全国健康与营养调查(National Health and Nutrition Examination Survey)。基线数据是通过调查和检查收集的,死亡状况则通过国家死亡指数记录追踪至 2015 年 12 月 31 日。研究采用 Cox 比例危险模型来计算各种原因(包括心血管疾病和癌症)导致的死亡率的危险比 (HR) 和 95% 置信区间 (CI):队列中的平均铁摄入量为每天 14.1 ± 7.4 毫克,参与者平均年龄为 61.3 岁,男性成年人为 3059 人(51.3%)。在 41425 人年的跟踪调查中,有 1497 人死亡。在对多种变量进行调整后,铁的摄入量在 11.1 至 14.4 毫克之间与最低的全因死亡风险相关(HR 0.83 [0.70, 0.99],P 结论):我们的研究结果表明,糖尿病患者的膳食铁摄入量与全因死亡率之间存在非线性关系。具体来说,铁的摄入量越高,男性的全因死亡风险就越高,而女性则可能具有保护作用。
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引用次数: 0
Correction: The effects of gut microbiome manipulation on glycemic indices in patients with non-alcoholic fatty liver disease: a comprehensive umbrella review. 更正:肠道微生物组操作对非酒精性脂肪肝患者血糖指数的影响:全面综述。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-20 DOI: 10.1038/s41387-024-00327-w
Azin Vakilpour, Ehsan Amini-Salehi, Arman Soltani Moghadam, Mohammad-Hossein Keivanlou, Negin Letafatkar, Arman Habibi, Mohammad Hashemi, Narges Eslami, Reza Zare, Naeim Norouzi, Hamed Delam, Farahnaz Joukar, Fariborz Mansour-Ghanaei, Soheil Hassanipour, Sandeep Samethadka Nayak
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引用次数: 0
A potential therapeutic strategy of an innovative probiotic formulation toward topical treatment of diabetic ulcer: an in vivo study. 创新益生菌制剂用于局部治疗糖尿病溃疡的潜在治疗策略:一项体内研究。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-20 DOI: 10.1038/s41387-024-00320-3
Farkhonde Karimi, Nima Montazeri-Najafabady, Fatemeh Mohammadi, Amir Azadi, Farhad Koohpeyma, Ahmad Gholami

Background: The probiotic potential of Lacticacid bacteria has been studied in various medical complications, from gastrointestinal diseases to antibiotic resistance infections recently. Moreover, diabetic ulcer (DU) is known as one of the most significant global healthcare concerns, which comprehensively impacts the quality of life for these patients. Given that the conventional treatments of DUs have failed to prevent later complications completely, developing alternative therapies seems to be crucial.

Methods: We designed the stable oleogel-based formulation of viable probiotic cells, including Lactobacillus rhamnosus (L. rhamnosus), Lactobacillus casei (L. casei), Lactobacillus fermentum (L. fermentum), and Lactobacillus acidophilus (L. acidophilus) individually to investigate their effect on wound healing process as an in vivo study. The wound repair process was closely monitored regarding morphology, biochemical, and histopathological changes over two weeks and compared it with the effects of topical tetracycline as an antibiotic approach. Furthermore, the antibiofilm activity of probiotic bacteria was assessed against some common pathogens.

Results: The findings indicated that all tested lactobacillus groups (excluded L. casei) included in the oleogel-based formulation revealed a high potential for repairing damaged skin due to the considerably more levels of hydroxyproline content of tissue samples along with the higher numerical density of mature fibroblasts cell and volume density of hair follicles, collagen fibrils, and neovascularization in comparison with antibiotic and control groups. L. acidophilus and L. rhamnosus showed the best potential of wound healing among all lactobacillus species, groups treated by tetracycline and control groups. Besides, L. rhamnosus showed a significant biofilm inhibition activity against tested pathogens.

Conclusions: This experiment demonstrated that the designed formulations containing probiotics, particularly L. acidophilus and L. rhamnosus, play a central role in manipulating diabetic wound healing. It could be suggested as an encouraging nominee for diabetic wound-healing alternative approaches, though further studies in detailed clinical trials are needed.

背景:最近,乳酸菌的益生潜能已被用于研究从胃肠道疾病到抗生素耐药性感染等各种医疗并发症。此外,众所周知,糖尿病溃疡(DU)是全球最重要的医疗保健问题之一,全面影响着这些患者的生活质量。鉴于糖尿病溃疡的传统治疗方法无法完全预防后期并发症,开发替代疗法似乎至关重要:方法:我们设计了基于油凝胶的稳定益生菌细胞制剂,包括鼠李糖乳杆菌(L. rhamnosus)、干酪乳杆菌(L. casei)、发酵乳杆菌(L. fermentum)和嗜酸乳杆菌(L. acidophilus),作为一项体内研究来探讨它们对伤口愈合过程的影响。研究人员密切监测了两周内伤口修复过程中的形态、生化和组织病理学变化,并将其与局部使用四环素作为抗生素的效果进行了比较。此外,还评估了益生菌对一些常见病原体的抗生物膜活性:结果:研究结果表明,与抗生素组和对照组相比,油凝胶配方中的所有受试乳酸菌组(不包括干酪乳杆菌)都具有修复受损皮肤的巨大潜力,因为组织样本中的羟脯氨酸含量更高,成熟成纤维细胞的数量密度更高,毛囊、胶原纤维和新生血管的体积密度也更高。嗜酸乳杆菌和鼠李糖杆菌在所有乳酸杆菌种类、四环素治疗组和对照组中显示出最佳的伤口愈合潜力。此外,鼠李糖杆菌对测试病原体具有显著的生物膜抑制活性:本实验表明,所设计的含有益生菌(尤其是嗜酸乳杆菌和鼠李糖杆菌)的配方在控制糖尿病伤口愈合方面发挥了重要作用。尽管还需要在详细的临床试验中进行进一步的研究,但它可以作为糖尿病伤口愈合替代方法的一个令人鼓舞的提名。
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引用次数: 0
Ginger essential oil prevents NASH progression by blocking the NLRP3 inflammasome and remodeling the gut microbiota-LPS-TLR4 pathway in mice. 生姜精油通过阻断小鼠体内的 NLRP3 炎性体和重塑肠道微生物群-LPS-TLR4 通路来预防 NASH 的发展。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-16 DOI: 10.1038/s41387-024-00306-1
Suraphan Panyod, Wei-Kai Wu, Ya-Chi Hsieh, Yea-Jing Tseng, Sin-Yi Peng, Rou-An Chen, Huai-Syuan Huang, Yi-Hsun Chen, Ting-Chin David Shen, Chi-Tang Ho, Chun-Jen Liu, Hsiao-Li Chuang, Chi-Chang Huang, Ming-Shiang Wu, Lee-Yan Sheen

Background: Diet and gut microbiota contribute to non-alcoholic steatohepatitis (NASH) progression. High-fat diets (HFDs) change gut microbiota compositions, induce gut dysbiosis, and intestinal barrier leakage, which facilitates portal influx of pathogen-associated molecular patterns including lipopolysaccharides (LPS) to the liver and triggers inflammation in NASH. Current therapeutic drugs for NASH have adverse side effects; however, several foods and herbs that exhibit hepatoprotection could be an alternative method to prevent NASH.

Methods: We investigated ginger essential oil (GEO) against palm oil-containing HFDs in LPS-injected murine NASH model.

Results: GEO reduced plasma alanine aminotransferase levels and hepatic pro-inflammatory cytokine levels; and increased antioxidant catalase, glutathione reductase, and glutathione levels to prevent NASH. GEO alleviated hepatic inflammation through mediated NLR family pyrin domain-containing 3 (NLRP3) inflammasome and LPS/Toll-like receptor four (TLR4) signaling pathways. GEO further increased beneficial bacterial abundance and reduced NASH-associated bacterial abundance.

Conclusion: This study demonstrated that GEO prevents NASH progression which is probably associated with the alterations of gut microbiota and inhibition of the LPS/TLR4/NF-κB pathway. Hence, GEO may offer a promising application as a dietary supplement for the prevention of NASH.

背景:饮食和肠道微生物群对非酒精性脂肪性肝炎(NASH)的发展起着重要作用。高脂饮食(HFDs)会改变肠道微生物群的组成,诱发肠道菌群失调和肠道屏障渗漏,这有利于包括脂多糖(LPS)在内的病原体相关分子模式进入肝脏,并引发非酒精性脂肪性肝炎的炎症。目前治疗 NASH 的药物有不良副作用;然而,一些具有保肝作用的食物和草药可作为预防 NASH 的替代方法:方法:我们研究了生姜精油(GEO)与含棕榈油的高密度脂蛋白胆固醇(HFDs)在LPS注射小鼠NASH模型中的作用:结果:GEO降低了血浆丙氨酸氨基转移酶水平和肝脏促炎细胞因子水平;提高了抗氧化剂过氧化氢酶、谷胱甘肽还原酶和谷胱甘肽水平,从而预防了NASH。GEO 通过介导 NLR 家族含吡咯啉结构域 3(NLRP3)炎性体和 LPS/Toll-like receptor four(TLR4)信号通路缓解肝脏炎症。GEO进一步增加了有益细菌的数量,降低了NASH相关细菌的数量:本研究表明,GEO 可预防 NASH 的发展,这可能与肠道微生物群的改变和 LPS/TLR4/NF-κB 通路的抑制有关。因此,GEO可作为预防NASH的膳食补充剂,具有广阔的应用前景。
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引用次数: 0
Loss of Cldn5 -and increase in Irf7-in the hippocampus and cerebral cortex of diabetic mice at the early symptomatic stage. 糖尿病小鼠早期症状阶段海马和大脑皮层中 Cldn5 的缺失和 Irf7 的增加。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-15 DOI: 10.1038/s41387-024-00325-y
Marta Carús-Cadavieco, Sandra González de la Fuente, Inés Berenguer López, Miguel A Serrano-Lope, Begoña Aguado, Francesc Guix, Ernest Palomer, Carlos G Dotti

Analyzing changes in gene expression within specific brain regions of individuals with Type 2 Diabetes (T2DM) who do not exhibit significant cognitive deficits can yield valuable insights into the mechanisms underlying the progression towards a more severe phenotype. In this study, transcriptomic analysis of the cortex and hippocampus of mice with long-term T2DM revealed alterations in the expression of 28 genes in the cerebral cortex and 15 genes in the hippocampus. Among these genes, six displayed consistent changes in both the cortex and hippocampus: Interferon regulatory factor 7 (Irf7), Hypoxia-inducible factor 3 alpha (Hif-3α), period circadian clock 2 (Per2), xanthine dehydrogenase (Xdh), and Transforming growth factor β-stimulated clone 22/TSC22 (Tsc22d3) were upregulated, while Claudin-5 (Cldn5) was downregulated. Confirmation of these changes was achieved through RT-qPCR. At the protein level, CLDN5 and IRF7 exhibited similar alterations, with CLDN5 being downregulated and IRF7 being upregulated. In addition, the hippocampus and cortex of the T2DM mice showed decreased levels of IκBα, implying the involvement of NF-κB pathways as well. Taken together, these results suggest that the weakening of the blood-brain barrier and an abnormal inflammatory response via the Interferon 1 and NF-κB pathways underlie cognitive impairment in individuals with long-standing T2DM.

2型糖尿病(T2DM)患者如果没有表现出明显的认知障碍,对其特定脑区基因表达的变化进行分析,可以帮助我们深入了解其向更严重表型发展的机制。在这项研究中,对长期患有 T2DM 的小鼠大脑皮层和海马的转录组分析显示,大脑皮层有 28 个基因的表达发生了改变,海马有 15 个基因的表达发生了改变。在这些基因中,有六个基因在大脑皮层和海马中的表达发生了一致的变化:干扰素调节因子7(Irf7)、缺氧诱导因子3α(Hif-3α)、昼夜节律周期时钟2(Per2)、黄嘌呤脱氢酶(Xdh)和转化生长因子β刺激克隆22/TSC22(Tsc22d3)上调,而Claudin-5(Cldn5)下调。这些变化通过 RT-qPCR 得到了证实。在蛋白质水平上,CLDN5 和 IRF7 表现出类似的变化,CLDN5 下调,IRF7 上调。此外,T2DM 小鼠海马和皮层中的 IκBα 水平下降,这意味着 NF-κB 通路也参与其中。综上所述,这些结果表明,血脑屏障的减弱以及通过干扰素1和NF-κB途径产生的异常炎症反应是长期患有T2DM的个体出现认知障碍的原因。
{"title":"Loss of Cldn5 -and increase in Irf7-in the hippocampus and cerebral cortex of diabetic mice at the early symptomatic stage.","authors":"Marta Carús-Cadavieco, Sandra González de la Fuente, Inés Berenguer López, Miguel A Serrano-Lope, Begoña Aguado, Francesc Guix, Ernest Palomer, Carlos G Dotti","doi":"10.1038/s41387-024-00325-y","DOIUrl":"10.1038/s41387-024-00325-y","url":null,"abstract":"<p><p>Analyzing changes in gene expression within specific brain regions of individuals with Type 2 Diabetes (T2DM) who do not exhibit significant cognitive deficits can yield valuable insights into the mechanisms underlying the progression towards a more severe phenotype. In this study, transcriptomic analysis of the cortex and hippocampus of mice with long-term T2DM revealed alterations in the expression of 28 genes in the cerebral cortex and 15 genes in the hippocampus. Among these genes, six displayed consistent changes in both the cortex and hippocampus: Interferon regulatory factor 7 (Irf7), Hypoxia-inducible factor 3 alpha (Hif-3α), period circadian clock 2 (Per2), xanthine dehydrogenase (Xdh), and Transforming growth factor β-stimulated clone 22/TSC22 (Tsc22d3) were upregulated, while Claudin-5 (Cldn5) was downregulated. Confirmation of these changes was achieved through RT-qPCR. At the protein level, CLDN5 and IRF7 exhibited similar alterations, with CLDN5 being downregulated and IRF7 being upregulated. In addition, the hippocampus and cortex of the T2DM mice showed decreased levels of IκBα, implying the involvement of NF-κB pathways as well. Taken together, these results suggest that the weakening of the blood-brain barrier and an abnormal inflammatory response via the Interferon 1 and NF-κB pathways underlie cognitive impairment in individuals with long-standing T2DM.</p>","PeriodicalId":19339,"journal":{"name":"Nutrition & Diabetes","volume":"14 1","pages":"64"},"PeriodicalIF":4.6,"publicationDate":"2024-08-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11327336/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141988475","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Association between fast eating speed and metabolic dysfunction-associated steatotic liver disease: a multicenter cross-sectional study and meta-analysis. 快速进食与代谢功能障碍相关性脂肪肝之间的关系:一项多中心横断面研究和荟萃分析。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-14 DOI: 10.1038/s41387-024-00326-x
Miao Zhang, Xiaoyang Sun, Xiaopeng Zhu, Lili Zheng, Yufang Bi, Qiang Li, Lirong Sun, Fusheng Di, Yushan Xu, Dalong Zhu, Yanyan Gao, Yuqian Bao, Yao Wang, Lanjie He, Chenmin Fan, Xin Gao, Jian Gao, Mingfeng Xia, Hua Bian

Background: With the fast pace of modern life, people have less time for meals, but few studies have examined the association between the habit of fast eating and metabolic diseases.

Objective: Combining the results of the current study and the prior ones, we aimed to investigate the possible relationship between fast eating and the risk of metabolic dysfunction-associated steatotic liver disease (MASLD).

Methods: This is a sub-analysis of a multicenter cross-sectional study of 1965 participants investigated the association between fast eating and MASLD in Chinese. Fast eating was defined as meal time less than five minutes and participants were divided into three categories based on their self-reported frequency of fast eating: ≤1 time/month, ≤1 time/week and ≥2 times/week. We further conducted a literature search for available studies published before November, 2023 as well as a meta-analysis to investigate the association between fast eating and MASLD.

Results: The proportion of MASLD was 59.3%, 50.5%, and 46.2% in participants with fast eating ≥2 times/week, ≤1 time/week and ≤1 time/month, respectively (P for trend <0.001). The frequency of fast eating was independently associated with risk of MASLD after multiple adjustment for sex, age, demographics, smoking and drinking status, BMI and clinical metabolic parameters (OR, 1.29; 95%CI, 1.09-1.53). Participants who ate fast frequently (≥2 times/week) had 81% higher risk of MASLD (P = 0.011). A meta-analysis of five eligible studies confirmed that frequent fast eating was associated with increased risk of MASLD (pooled OR, 1.22; 95%CI, 1.07-1.39).

Conclusions: Frequent fast eating was associated with an increased risk of MASLD.

背景:随着现代生活节奏的加快,人们吃饭的时间越来越少:随着现代生活节奏的加快,人们吃饭的时间越来越少,但很少有研究探讨快餐习惯与代谢性疾病之间的关系:结合本次研究和之前研究的结果,我们旨在调查快餐与代谢功能障碍相关性脂肪性肝病(MASLD)风险之间可能存在的关系:这是对一项多中心横断面研究的子分析,该研究调查了中国人快餐与脂肪肝之间的关系。快餐的定义是进餐时间少于5分钟,根据参与者自我报告的快餐频率将其分为三类:≤1次/月、≤1次/周和≥2次/周。我们还对2023年11月之前发表的研究进行了文献检索和荟萃分析,以研究快餐与MASLD之间的关系:结果:在快餐≥2次/周、≤1次/周和≤1次/月的参与者中,MASLD的比例分别为59.3%、50.5%和46.2%(P为趋势性结论):经常快餐与罹患MASLD的风险增加有关。
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引用次数: 0
Identification of interactions between genetic risk scores and dietary patterns for personalized prevention of kidney dysfunction in a population-based cohort. 确定遗传风险评分与饮食模式之间的相互作用,在人群队列中个性化预防肾功能障碍。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-14 DOI: 10.1038/s41387-024-00316-z
Min-Jae Jang, Li-Juan Tan, Min Young Park, Sangah Shin, Jun-Mo Kim

Background & aim: Chronic kidney disease (CKD) is a heterogeneous disorder that affects the kidney structure and function. This study investigated the effect of the interaction between genetic factors and dietary pattern on kidney dysfunction in Korean adults.

Methods: Baseline data were obtained from the Ansan and Ansung Study of the Korean Genome and Epidemiology Study involving 8230 participants aged 40-69 years. Kidney dysfunction was defined as an estimated glomerular filtration rate < 90 mL/minute/1.73 m2. Genomic DNAs genotyped on the Affymetrix® Genome-Wide Human SNP array 5.0 were isolated from peripheral blood. A genome-wide association study using a generalized linear model was performed on 1,590,162 single-nucleotide polymorphisms (SNPs). To select significant SNPs, the threshold criterion was set at P-value < 5 × 10-8. Linkage disequilibrium clumping was performed based on the R2 value, and 94 SNPs had a significant effect. Participants were divided into two groups based on their generic risk score (GRS): the low-GR group had GRS > 0, while the high-GR group had GRS ≤ 0.

Results: Three distinct dietary patterns were extracted, namely, the "prudent pattern," "flour-based and animal food pattern," and "white rice pattern," to analyze the effect of dietary pattern on kidney function. In the "flour-based and animal food pattern," higher pattern scores were associated with a higher prevalence of kidney dysfunction in both the low and high GR groups (P for trend < 0.0001 in the low-, high-GR groups of model 1; 0.0050 and 0.0065 in the low-, high-GR groups of model 2, respectively).

Conclusions: The results highlight a significant association between the 'flour-based and animal food pattern' and higher kidney dysfunction prevalence in individuals with both low and high GR. These findings suggest that personalized nutritional interventions based on GR profiles may become the basis for presenting GR-based individual dietary patterns for kidney dysfunction.

背景和目的:慢性肾脏病(CKD)是一种影响肾脏结构和功能的异质性疾病。本研究调查了遗传因素和饮食模式之间的相互作用对韩国成年人肾功能障碍的影响:基线数据来自韩国基因组与流行病学研究的安山和安城研究,共有 8230 名参与者,年龄在 40-69 岁之间。肾功能障碍的定义是估计肾小球滤过率为 2。从外周血中分离出在 Affymetrix® Genome-Wide Human SNP array 5.0 上进行基因分型的基因组 DNA。利用广义线性模型对 1,590,162 个单核苷酸多态性(SNPs)进行了全基因组关联研究。为了选择有意义的 SNPs,阈值标准设定为 P 值 -8。根据 R2 值进行了连锁不平衡聚类,结果有 94 个 SNPs 有显著影响。根据通用风险评分(GRS)将参与者分为两组:低GR组的GRS>0,而高GR组的GRS≤0:提取了三种不同的膳食模式,即 "谨慎模式"、"面粉和动物性食物模式 "和 "白米饭模式",以分析膳食模式对肾功能的影响。在 "以面粉和动物性食物为主的膳食模式 "中,较高的模式得分与低GR组和高GR组较高的肾功能障碍患病率相关(P为趋势性结论):研究结果表明,"以面粉和动物性食物为主的食物模式 "与低GR和高GR人群中较高的肾功能障碍患病率之间存在明显关联。这些研究结果表明,基于 GR 图谱的个性化营养干预可能成为针对肾功能障碍提出基于 GR 的个人饮食模式的基础。
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引用次数: 0
Optimization of diabetes prediction methods based on combinatorial balancing algorithm. 基于组合平衡算法的糖尿病预测方法优化。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-14 DOI: 10.1038/s41387-024-00324-z
HuiZhi Shao, Xiang Liu, DaShuai Zong, QingJun Song

Background: Diabetes, as a significant disease affecting public health, requires early detection for effective management and intervention. However, imbalanced datasets pose a challenge to accurate diabetes prediction. This imbalance often results in models performing poorly in predicting minority classes, affecting overall diagnostic performance.

Objectives: To address this issue, this study employs a combination of Synthetic Minority Over-sampling Technique (SMOTE) and Random Under-Sampling (RUS) for data balancing and uses Optuna for hyperparameter optimization of machine learning models. This approach aims to fill the gap in current research concerning data balancing and model optimization, thereby improving prediction accuracy and computational efficiency.

Methods: First, the study uses SMOTE and RUS methods to process the imbalanced diabetes dataset, balancing the data distribution. Then, Optuna is utilized to optimize the hyperparameters of the LightGBM model to enhance its performance. During the experiment, the effectiveness of the proposed methods is evaluated by comparing the training results of the dataset before and after balancing.

Results: The experimental results show that the enhanced LightGBM-Optuna model improves the accuracy from 97.07% to 97.11%, and the precision from 97.17% to 98.99%. The time required for a single search is only 2.5 seconds. These results demonstrate the superiority of the proposed method in handling imbalanced datasets and optimizing model performance.

Conclusions: The study indicates that combining SMOTE and RUS data balancing algorithms with Optuna for hyperparameter optimization can effectively enhance machine learning models, especially in dealing with imbalanced datasets for diabetes prediction.

背景:糖尿病是影响公众健康的重大疾病,需要及早发现以进行有效管理和干预。然而,不平衡的数据集给准确预测糖尿病带来了挑战。这种不平衡往往会导致模型在预测少数群体类别时表现不佳,从而影响整体诊断性能:为解决这一问题,本研究采用合成少数群体过度采样技术(SMOTE)和随机欠采样技术(RUS)相结合的方法进行数据平衡,并使用 Optuna 对机器学习模型进行超参数优化。这种方法旨在填补目前有关数据平衡和模型优化研究的空白,从而提高预测准确性和计算效率:首先,研究使用 SMOTE 和 RUS 方法处理不平衡的糖尿病数据集,平衡数据分布。然后,利用 Optuna 优化 LightGBM 模型的超参数,以提高其性能。在实验过程中,通过比较平衡前后数据集的训练结果来评估所提出方法的有效性:实验结果表明,增强型 LightGBM-Optuna 模型的准确率从 97.07% 提高到 97.11%,精度从 97.17% 提高到 98.99%。单次搜索所需的时间仅为 2.5 秒。这些结果证明了所提出的方法在处理不平衡数据集和优化模型性能方面的优越性:研究表明,将 SMOTE 和 RUS 数据平衡算法与 Optuna 超参数优化相结合,可以有效增强机器学习模型,尤其是在处理糖尿病预测的不平衡数据集时。
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引用次数: 0
Pathogenic gene connections in type 2 diabetes and non-alcoholic fatty liver disease: a bioinformatics analysis and mouse model investigations experiments. 2 型糖尿病和非酒精性脂肪肝的致病基因联系:生物信息学分析和小鼠模型调查实验。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-06 DOI: 10.1038/s41387-024-00323-0
Chao Chen, Kunhuan Yang, Yuhan Zhang, Meiqi Lu, Xiaoyan Zhao, Zheng Wan

Background: Type 2 diabetes (T2D) and non-alcoholic fatty liver disease (NAFLD) are prevalent metabolic disorders with overlapping pathophysiological mechanisms. A comprehensive understanding of the shared molecular pathways involved in these conditions can advance the development of effective therapeutic interventions.

Methods: We used two datasets sourced from the Gene Expression Omnibus (GEO) database to identify common differentially expressed genes (DEGs) between T2D and NAFLD. Subsequently, we conducted Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses to identify the enriched biological processes and signaling pathways. In addition, we performed a protein-protein interaction (PPI) network analysis to identify hub genes with pivotal roles. To validate our findings, we established a type 2 diabetic mouse model with NAFLD.

Results: Our analysis identified 53 DEGs shared between T2D and NAFLD. Enrichment analysis revealed their involvement in signal transduction, transcriptional regulation, and cell proliferation as well as in the ferroptosis signaling pathways. PPI network analysis identified ten hub genes, namely CD44, CASP3, FYN, KLF4, HNRNPM, HNRNPU, FUBP1, RUNX1, NOTCH3, and ANXA2. We validated the differential expression of FYN, HNRNPU, and FUBP1 in liver tissues of a type 2 diabetic mouse model with NAFLD.

Conclusions: Our study offers valuable insights into the shared molecular mechanisms underlying T2D and NAFLD. The identified hub genes and pathways present promising prospects as therapeutic targets to address these prevalent metabolic disorders.

背景:2型糖尿病(T2D)和非酒精性脂肪肝(NAFLD)是普遍存在的代谢性疾病,其病理生理机制相互重叠。全面了解这些疾病所涉及的共同分子通路可促进有效治疗干预措施的开发:我们利用基因表达总库(GEO)数据库中的两个数据集来识别 T2D 和非酒精性脂肪肝之间常见的差异表达基因(DEGs)。随后,我们进行了基因本体(GO)和京都基因与基因组百科全书(KEGG)分析,以确定富集的生物过程和信号通路。此外,我们还进行了蛋白质-蛋白质相互作用(PPI)网络分析,以确定具有关键作用的枢纽基因。为了验证我们的研究结果,我们建立了一个患有非酒精性脂肪肝的2型糖尿病小鼠模型:结果:我们的分析发现了53个T2D和NAFLD共有的DEGs。富集分析显示,这些基因参与了信号转导、转录调控、细胞增殖以及铁蛋白沉积信号通路。PPI网络分析发现了十个枢纽基因,即CD44、CASP3、FYN、KLF4、HNRNPM、HNRNPU、FUBP1、RUNX1、NOTCH3和ANXA2。我们验证了 FYN、HNRNPU 和 FUBP1 在 2 型糖尿病小鼠非酒精性脂肪肝模型肝组织中的差异表达:我们的研究为了解 T2D 和非酒精性脂肪肝的共同分子机制提供了有价值的见解。结论:我们的研究对 T2D 和非酒精性脂肪肝的共同分子机制提供了有价值的见解,所发现的枢纽基因和通路有望成为治疗目标,以解决这些普遍存在的代谢性疾病。
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引用次数: 0
Global prevalence of diet low in calcium and the disease burden: results from the Global Burden of Disease Study 2019. 全球低钙饮食流行率与疾病负担:2019 年全球疾病负担研究结果。
IF 4.6 2区 医学 Q1 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-08-03 DOI: 10.1038/s41387-024-00321-2
Gang Ti, Yuan He, Youde Xiao, Jiyuan Yan, Rong Ding, Pengfei Cheng, Wei Wu, Dawei Ye, Jinxi Wang, Lili Li

Background: Due to the essential role of calcium in vital biological functions, diet low in calcium (DLC) is associated with various diseases. However, there is a lack of study about the current prevalence and health burden due to DLC using reliable data sources.

Methods: We used data from the Global Burden of Disease study 2019 (GBD 2019) to estimate the prevalence and health burden of DLC in 204 countries from 1990 to 2019, by age, sex, and sociodemographic index (SDI). The estimates were produced in DisMod-MR 2.1, a Bayesian meta-regression tool. Summary exposure value (SEV) was used to show the prevalence of DLC, while diseases adjusted life year (DALY) was used to represent the disease burden. The disease burden was estimated for DLC-induced colorectal cancer. Spearman Rank Order correlation was used for correlation analysis, and estimated annual percentage (EAPC) was used to reflect the temporal trends.

Results: From 1990 to 2019, the global prevalence of DLC decreased (EAPC of SEV, -0.47; 95% CI, -0.5 to -0.43), but have increased in Oceania region and in many countries, such as United Arab Emirates, New Zealand, Japan, and France. The global DALYs associated with low in calcium were estimated to be 3.14 million (95% uncertainty interval (UI), 2.25-4.26 million) in 2019, with an age standardized rate of 38.2 (95% UI, 27.2-51.8) per 100,000. Unlike the prevalence, the global age standardized DALY rates has remained unchanged (EAPC, -0.03; 95% CI, -0.12 to 0.07), but has increased in over 80 of the 204 countries, located mainly in Asia, Africa, and South America. In all years and regions, the age standardized SEV and DALY rates were higher in male people than that in female people. The prevalence (rho = -0.823; P < 0.001) and disease burden (rho = -0.433; P < 0.001) associated with diet in low calcium were strongly correlated to SDI. The prevalence decreased with age, but the DALY rates increased with age and peaked at about 90 years. The prevalence of DLC has decreased worldwide and in most countries, but the disease burden of DLC induced colorectal cancer has increased in over 40% of countries worldwide.

Conclusion: Countries with low sociodemographic level and male people are more likely to experience the risk of DLC and related disease burden. Related measures in improve dietary calcium intake are in need to address diet in low calcium related health problems.

背景:由于钙在重要的生物功能中起着至关重要的作用,低钙饮食(DLC)与各种疾病相关。然而,目前缺乏利用可靠数据来源对低钙饮食的流行率和健康负担的研究:我们利用 2019 年全球疾病负担研究(GBD 2019)的数据,按年龄、性别和社会人口指数(SDI)估算了 1990 年至 2019 年期间 204 个国家的 DLC 患病率和健康负担。估算结果由贝叶斯元回归工具 DisMod-MR 2.1 生成。摘要暴露值(SEV)用于显示 DLC 的患病率,疾病调整生命年(DALY)用于表示疾病负担。对 DLC 引发的结直肠癌的疾病负担进行了估算。相关性分析采用斯皮尔曼等级相关性(Spearman Rank Order correlation),估计年百分比(EAPC)用于反映时间趋势:从 1990 年到 2019 年,DLC 的全球患病率有所下降(SEV 的 EAPC,-0.47;95% CI,-0.5 至 -0.43),但大洋洲地区和许多国家(如阿拉伯联合酋长国、新西兰、日本和法国)的患病率有所上升。据估计,2019 年全球与低钙有关的残疾调整寿命年数为 314 万(95% 不确定区间(UI),225 万-426 万),年龄标准化比率为每 10 万人 38.2(95% UI,27.2-51.8)。与患病率不同,全球年龄标准化残疾调整寿命年数率保持不变(EAPC,-0.03;95% CI,-0.12 至 0.07),但在 204 个国家中,有 80 多个国家的年龄标准化残疾调整寿命年数率有所上升,这些国家主要位于亚洲、非洲和南美洲。在所有年份和地区,男性的年龄标准化 SEV 和 DALY 率均高于女性。发病率(rho = -0.823;P 结论:男性发病率高于女性:社会人口水平较低的国家和男性更有可能面临 DLC 风险和相关疾病负担。需要采取相关措施提高膳食中钙的摄入量,以解决膳食中与低钙相关的健康问题。
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引用次数: 0
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Nutrition & Diabetes
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