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Combatting extensively drug-resistant Salmonella: a global perspective on outbreaks, impacts, and control strategies. 抗击广泛耐药沙门氏菌:从全球角度看疫情爆发、影响和控制策略。
IF 2.5 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-10-01 Epub Date: 2024-11-07 DOI: 10.1080/20477724.2024.2416864
Aisha Bisola Bello, Ridwan Olamilekan Adesola, Ibrahim Idris, Godfred Yawson Scott, Suleiman Alfa, Favour Akinfemi Ajibade

Antibiotic resistance in typhoid fever poses a critical public health problem due to the emergence of extensively drug-resistant (XDR) Salmonella, resulting in prolonged illness and treatment failure. Salmonella enterica serovar Typhi is the most predominant among all serotypes and can acquire resistance. The emergence of XDR Salmonella in various regions globally, particularly Pakistan, presents a concerning trend. However, limited data availability impedes a comprehensive understanding of the outbreaks and hinders the development of real-time solutions. Here, we have provided an updated overview of the current outbreaks of XDR Salmonella in epidemic and endemic regions. Treatments of XDR Salmonella infections are challenging, as there are records of treatment failure in humans and animals. However, intensive prevention techniques can be implemented pending the advent of novel antibiotics. Emphasis on antimicrobial stewardship and frequent surveillance of the pathogen should be made to keep track of potential outbreaks in both human and animal populations. Although progress is being made to combat XDR Salmonella within some regions, a unified and efficient effort on an international scale is required to curtail the XDR outbreak before it escalates and leads us back to the pre-antibiotic era.

由于广泛耐药(XDR)沙门氏菌的出现,伤寒中的抗生素耐药性已成为一个严重的公共卫生问题,导致病程延长和治疗失败。伤寒肠炎沙门氏菌是所有血清型中最主要的一种,可产生耐药性。XDR 沙门氏菌在全球各地区(尤其是巴基斯坦)的出现呈现出令人担忧的趋势。然而,数据的有限性妨碍了对疫情的全面了解,也阻碍了实时解决方案的开发。在此,我们提供了当前流行病和地方病地区 XDR 沙门氏菌爆发的最新概况。治疗 XDR 沙门氏菌感染具有挑战性,因为在人类和动物身上都有治疗失败的记录。不过,在新型抗生素出现之前,可以采用强化预防技术。应重视抗菌药物管理并经常对病原体进行监测,以跟踪人类和动物群体中可能爆发的疫情。尽管一些地区在抗击 XDR 沙门氏菌方面取得了进展,但仍需要在国际范围内开展统一、高效的工作,以遏制 XDR 的爆发,避免其升级并导致我们回到前抗生素时代。
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引用次数: 0
Genetic diversity, variation and recombination among the human papillomaviruses (HPVs) genomes isolated in China: a comparative genomic and phylogenetic analysis 中国分离的人乳头瘤病毒(HPV)基因组的遗传多样性、变异和重组:基因组和系统发育比较分析
IF 3.4 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-09-12 DOI: 10.1080/20477724.2024.2401273
Pir Tariq Shah, Zhenyong Wu, Ruilan Ma, Chengjun Wu
Human papillomaviruses (HPVs) are widespread, sexually transmitted group of viruses that infect most individuals at some stage, causing genital warts and cancers. They are members of the Papillomav...
人类乳头瘤病毒(HPV)是一种广泛传播的性传播病毒,大多数人都会在某个阶段感染这种病毒,导致生殖器疣和癌症。它们是乳头状瘤病毒(Papillomavir...
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引用次数: 0
The first molecular record of Borrelia afzelii, B. garinii, B. valaisiana, B. burgdorferi s.s. and B. bavariensis in Bosnia and Herzegovina 在波斯尼亚和黑塞哥维那首次发现阿夫泽尔氏包柔氏菌、加里宁氏包柔氏菌、瓦莱西亚氏包柔氏菌、勃氏包柔氏杆菌和巴伐利亚氏包柔氏菌的分子记录
IF 3.4 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-09-10 DOI: 10.1080/20477724.2024.2399380
Lejla Ušanović, Lejla Lasić, Naris Pojskić, Dalila Destanović, Jasna Hanjalić Kurtović, Belma Kalamujić Stroil
Borrelia burgdorferi sensu lato complex comprises 20 species, from which B. afzelii, B. garinii, B. burgdorferi sensu stricto, B. bavariensis, and B. spielmanii are directly associated with Lyme bo...
严格意义上的勃氏包柔氏菌、巴伐利亚包柔氏菌和斯皮尔曼包柔氏菌与莱姆病直接相关。
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引用次数: 0
Evaluation of the relationship between YKL-40 level and clinical severity in patients with Crimean-Congo hemorrhagic fever. 评估克里米亚-刚果出血热患者的 YKL-40 水平与临床严重程度之间的关系。
IF 2.5 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-09-01 Epub Date: 2024-08-14 DOI: 10.1080/20477724.2024.2392225
Murat Aydin, Nurten Nur Aydin, Esra Laloğlu

Crimean-Congo hemorrhagic fever (CCHF) is a widespread tick-borne viral disease. YKL-40 (also known as chitinase-3-like-1 protein) is an acute phase protein released by various immune cells. The purpose of this study was to investigate the relationship between YKL-40 level and the clinical course and prognosis of CCHF. The study included 78 patients who were admitted to our hospital between April 15 and 30 August 2022 and had a positive polymerase chain reaction test result for CCHF. The patients were divided into two groups, severe and non-severe. In addition, a control group consisting of 22 healthy people was established. Mean serum YKL-40 levels were significantly higher in patients than controls (106.8 ng/mL ± 91.2 and 47.1 ng/mL ± 35.3, respectively; p < 0.001). However, mean YKL-40 levels were also significantly higher in patients with severe CCHF compared to non-severe cases (173.3 ± 112.3 and 67.5 ± 41.7, respectively; p < 0.001). A comparison of the 10 exitus patients and the 68 survivors revealed significantly higher YKL-40 levels in the exitus group (mean: 214.0 ± 139.0 and 92.8 ± 73.6, respectively; p = 0.001). A receiver operating characteristic analysis for YKL-40 levels to distinguish between severe and non-severe patients found an area under the curve of 0.925. YKL-40 levels were measured with a sensitivity of 97% and a specificity of 84% with a cutoff value of 90.7 ng/mL. YKL-40 levels measured at the time of hospital presentation in patients with CCHF can be used as a biomarker for clinical course and prognosis.

克里米亚-刚果出血热(CCHF)是一种广泛传播的蜱媒病毒性疾病。YKL-40(又称几丁质酶-3-样-1蛋白)是由各种免疫细胞释放的一种急性期蛋白。本研究旨在探讨YKL-40水平与CCHF临床病程和预后之间的关系。研究纳入了我院 2022 年 4 月 15 日至 8 月 30 日期间收治的 78 名聚合酶链反应检测结果呈阳性的慢性阻塞性肺疾病患者。患者被分为严重和非严重两组。此外,还设立了由 22 名健康人组成的对照组。患者血清中 YKL-40 的平均水平明显高于对照组(分别为 106.8 ng/mL ± 91.2 和 47.1 ng/mL ± 35.3;p p = 0.001)。对 YKL-40 水平进行接收器操作特征分析后发现,区分重度和非重度患者的曲线下面积为 0.925。以 90.7 纳克/毫升为临界值,YKL-40 水平的灵敏度为 97%,特异度为 84%。在CCHF患者入院时测量的YKL-40水平可作为临床病程和预后的生物标志物。
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引用次数: 0
Global and regional mortality statistics of nipah virus from 1994 to 2023: a comprehensive systematic review and meta-analysis. 1994 年至 2023 年全球和地区尼帕病毒死亡率统计:全面系统回顾和荟萃分析。
IF 4.9 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-09-01 Epub Date: 2024-07-20 DOI: 10.1080/20477724.2024.2380131
Srivatsa Surya Vasudevan, Arun Subash, Fena Mehta, Tiba Yamin Kandrikar, Rupak Desai, Kaif Khan, Sneha Khanduja, Aakanksha Pitliya, Lekhya Raavi, Sai Gautham Kanagala, Piyush Gondaliya

The mortality rate of Nipah virus (NiV) can vary in different regions, and its pattern across timelines has yet to be assessed. The primary objective is to perform a comparative analysis of mortality rates across different timelines and countries. Articles reporting NiV mortality from inception to November 2023 were analyzed in PubMed, Ovid Embase, Scopus, and Web of Science databases. A meta-analysis utilizing random-effects models determined the mortality rate secondary to NiV complications. The initial search strategy yielded 1213 records, of which 36 articles met the inclusion criteria, comprising 2736 NiV patients. The Global mortality rate of the Nipah virus in the 2014-2023 decade was 80.1% (CI: 68.7-88.1%), indicating a significant 24% increase compared to the preceding decade (2004-2013) with a mortality rate of 54.1% (CI: 35.5-71.6%). Among the countries analyzed for overall mortality from 1994-2023, India experienced the highest mortality rate at 82.7% (CI: 74.6-88.6%), followed by Bangladesh at 62.1% (CI: 45.6-76.2%), Philippines at 52.9% (CI: 30-74.5%), Malaysia at 28.9% (CI: 21.4-37.9%), and Singapore at 21% (CI: 8-45%). Subgroup analysis revealed that India consistently had the highest mortality rate for the past two decades (91.7% and 89.3%). The primary complication leading to mortality was encephalitis, accounting for 95% of cases. This systematic review and meta-analysis revealed a noteworthy surge in NiV mortality rates, particularly in the current decade (2014-2023). The escalation, with India reporting a concerning level of mortality of 89.3-91.7% in the past decades, signifies a pressing public health challenge.

尼帕病毒(NiV)的死亡率在不同地区会有所不同,其在不同时间段的模式也有待评估。本研究的主要目的是对不同时间段和不同国家的死亡率进行比较分析。我们在 PubMed、Ovid Embase、Scopus 和 Web of Science 数据库中分析了从开始到 2023 年 11 月期间报告 NiV 死亡率的文章。利用随机效应模型进行的荟萃分析确定了继发于NiV并发症的死亡率。最初的搜索策略产生了 1213 条记录,其中 36 篇文章符合纳入标准,包括 2736 名 NiV 患者。2014-2023年十年间,尼帕病毒的全球死亡率为80.1%(CI:68.7-88.1%),与前十年(2004-2013年)54.1%(CI:35.5-71.6%)的死亡率相比,显著增加了24%。在 1994-2023 年总体死亡率分析国家中,印度的死亡率最高,为 82.7%(CI:74.6-88.6%),其次是孟加拉国的 62.1%(CI:45.6-76.2%)、菲律宾的 52.9%(CI:30-74.5%)、马来西亚的 28.9%(CI:21.4-37.9%)和新加坡的 21%(CI:8-45%)。分组分析显示,在过去二十年中,印度的死亡率一直最高(91.7% 和 89.3%)。导致死亡的主要并发症是脑炎,占 95% 的病例。这项系统回顾和荟萃分析显示,尼罗河病毒死亡率显著上升,尤其是在当前十年(2014-2023 年)。在过去几十年中,印度报告的死亡率为 89.3%-91.7%,令人担忧。
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引用次数: 0
JN.1 and the ongoing battle: unpacking the characteristics of a new dominant COVID-19 variant. JN.1 和正在进行的战斗:解读 COVID-19 新变种的特征。
IF 4.9 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-09-01 Epub Date: 2024-06-17 DOI: 10.1080/20477724.2024.2369378
Reza Eshraghi, Ashkan Bahrami, Motahare Karimi Houyeh, Maryam Nasr Azadani

In the fourth year of the COVID-19 occurrence, a new COVID-19 variant, JN.1, has emerged and spread globally and become the dominant strain in several regions. It has some specific mutations in its spike proteins, empowering it with higher transmissibility. Regarding the significance of the issue, understanding the clinical and immunological traits of JN.1 is critical for enhancing health strategies and vaccination efforts globally, with the ultimate goal of bolstering our collective response to the pandemic. In this study, we take a look at the latest findings of JN.1 characteristics and mutations as well as its consequences on bypassing immune system. We demonstrate the importance of continual surveillance and strategic adaptation within healthcare frameworks along with the significance of wastewater sampling for the rapid identification of emerging SARS-CoV-2 variants.

在 COVID-19 出现的第四年,一种新的 COVID-19 变异株 JN.1 出现并在全球范围内传播,并成为多个地区的优势菌株。它的尖峰蛋白有一些特殊的突变,使其具有更高的传播性。就这一问题的意义而言,了解 JN.1 的临床和免疫学特征对于在全球范围内加强卫生策略和疫苗接种工作至关重要,其最终目标是加强我们对这一流行病的集体应对。在本研究中,我们探讨了有关 JN.1 特征和突变的最新发现,以及它对绕过免疫系统的影响。我们证明了在医疗保健框架内进行持续监控和战略调整的重要性,以及废水采样对快速识别新出现的 SARS-CoV-2 变异体的重要意义。
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引用次数: 0
Malaria diagnosis challenges and pfhrp2 and pfhrp3 gene deletions using pregnant women as sentinel population in Nanoro region, Burkina Faso. 以布基纳法索纳诺罗地区的孕妇为哨点人群进行疟疾诊断的挑战与 pfhrp2 和 pfhrp3 基因缺失。
IF 2.5 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-09-01 Epub Date: 2024-08-14 DOI: 10.1080/20477724.2024.2388489
Irene Molina-de la Fuente, Marc Christian Tahita, Kabore Bérenger, Thuy Huong Ta Tang, Luz García, Vicenta González, Agustín Benito, Judith M Hübschen, Halidou Tinto, Pedro Berzosa

Malaria in pregnancy causes adverse consequences and prompt and accurate diagnosis is essential for case management. In malaria endemic countries, diagnosis is mainly based on rapid diagnostic tests (RDT) and microscopy. However, increasing reports of false negatives caused by low parasitemia and pfhrp2/3 deletions raise concerns about HRP2-based RDT usefulness. This study aimed to assess RDT and microscopy performance and to describe pfhrp2/3 deletions in a cohort of 418 pregnant women in Burkina Faso. Malaria was diagnosed using RDT and microscopy and blood samples were collected during antenatal care visits. Diagnostic results were compared to PCR as gold standard. Pfhrp2 and pfhrp3 deletions were characterized for patients with confirmed P. falciparum infection. RDT had better sensitivity (76%) but lower specificity (83%) than microscopy (sensitivity = 57%; specificity = 98%). Low parasitemia (<150 parasites/µL), especially in multigravidae, was the principal factor causing false negatives by both methods. Moreover, pfhrp2 deletion frequency among overall false negatives by RDT was 21.43%. Higher frequency of deletions was found among all samples, independently of RDT result, for example around 2% of samples had double deletions meaning that the majority of deletions had no effect on RDT testing. Finally, it was found higher pfhrp2 deletion in women with lower uterine height during the first trimester. Wider and National surveillance study of deletions is recommended among pregnant women and in Burkina Faso.

妊娠期疟疾会造成不良后果,及时准确的诊断对病例管理至关重要。在疟疾流行的国家,诊断主要基于快速诊断检测(RDT)和显微镜检查。然而,越来越多关于低寄生虫血症和 pfhrp2/3 基因缺失导致假阴性的报道引起了人们对基于 HRP2 的 RDT 是否有用的担忧。这项研究旨在评估 RDT 和显微镜检查的性能,并描述布基纳法索 418 名孕妇队列中 pfhrp2/3 基因缺失的情况。疟疾诊断采用 RDT 和显微镜检查,血样在产前检查时采集。诊断结果与作为金标准的 PCR 进行了比较。对确诊感染恶性疟原虫的患者进行了 Pfhrp2 和 pfhrp3 基因缺失鉴定。与显微镜检查(灵敏度 = 57%;特异性 = 98%)相比,RDT 的灵敏度更高(76%),但特异性更低(83%)。寄生虫血症(pfhrp2 基因缺失)较低,RDT 的假阴性率为 21.43%。在所有样本中都发现了较高的缺失频率,这与 RDT 结果无关,例如约 2% 的样本有双重缺失,这意味着大多数缺失对 RDT 检测没有影响。最后,在怀孕头三个月子宫高度较低的妇女中,pfhrp2 基因缺失率较高。建议在布基纳法索对孕妇进行更广泛的缺失监测研究。
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引用次数: 0
Electrochemical biosensors for the detection of protozoan parasite: a scoping review. 用于检测原生动物寄生虫的电化学生物传感器:范围综述。
IF 4.9 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-09-01 Epub Date: 2024-07-20 DOI: 10.1080/20477724.2024.2381402
Syahrul Amin Sa'adon, Nur Hana Jasni, Hairul Hisham Hamzah, Nurulhasanah Othman

The development of rapid, accurate, and efficient detection methods for protozoan parasites can substantially control the outbreak of protozoan parasites infection, which poses a threat to global public health. Idealistically, electrochemical biosensors would be able to overcome the limitations of current detection methods due to their simplified detection procedure, on-site quantitative analysis, rapid detection time, high sensitivity, and portability. The objective of this scoping review is to evaluate the current state of electrochemical biosensors for detecting protozoan parasites. This review followed the most recent Preferred Reporting Items for Systematic Review and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) recommendations. Using electrochemical biosensor and protozoan parasite keywords, a literature search was conducted in PubMed, Scopus, Web of Science, and ScienceDirect on journals published between January 2014 and January 2022. Of the 52 studies, 19 were evaluated for eligibility, and 11 met the review's inclusion criteria to evaluate the effectiveness and limitations of the developed electrochemical biosensor platforms for detecting protozoan parasite including information about the samples, biomarkers, bioreceptors, detection system platform, nanomaterials used in fabrication, and limit of detection (LoD). Most electrochemical biosensors were fabricated using conventional electrodes rather than screen-printed electrodes (SPE). The range of the linear calibration curves for the developed electrochemical biosensors was between 200 ng/ml and 0.77 pM. The encouraging detection performance of the electrochemical biosensors demonstrate their potential as a superior alternative to existing detection techniques. On the other hand, more study is needed to determine the sensitivity and specificity of the electrochemical sensing platform for protozoan parasite detection.

开发快速、准确、高效的原生动物寄生虫检测方法,可有效控制威胁全球公共卫生的原生动物寄生虫感染疫情。理想情况下,电化学生物传感器因其检测程序简化、可现场定量分析、检测时间短、灵敏度高和便携性强等优点,能够克服现有检测方法的局限性。本次范围界定审查的目的是评估用于检测原生动物寄生虫的电化学生物传感器的现状。本综述遵循了最新的系统综述和元分析首选报告项目扩展范围综述(PRISMA-ScR)建议。利用电化学生物传感器和原生寄生虫关键词,在 PubMed、Scopus、Web of Science 和 ScienceDirect 上对 2014 年 1 月至 2022 年 1 月间发表的期刊进行了文献检索。在 52 项研究中,19 项进行了资格评估,11 项符合综述的纳入标准,以评估所开发的电化学生物传感器平台在检测原生动物寄生虫方面的有效性和局限性,包括有关样本、生物标记物、生物受体、检测系统平台、制造中使用的纳米材料和检测限(LoD)的信息。大多数电化学生物传感器都是使用传统电极而不是丝网印刷电极(SPE)制造的。所开发的电化学生物传感器的线性校准曲线范围在 200 ng/ml 至 0.77 pM 之间。电化学生物传感器令人鼓舞的检测性能表明,它们有潜力成为现有检测技术的一种优越替代品。另一方面,要确定电化学传感平台检测原生动物寄生虫的灵敏度和特异性,还需要进行更多的研究。
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引用次数: 0
Capacity building for infectious disease control in Sub-Saharan Africa. 撒哈拉以南非洲传染病控制能力建设。
IF 4.9 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-09-01 Epub Date: 2023-10-18 DOI: 10.1080/20477724.2023.2272363
William C Lieber, Faraan O Rahim, Henry S Q Lartey, Devesh Shah, Blandina T Mmbaga, Nathan M Thielman, Julian T Hertz
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引用次数: 0
Immunization of laboratory animal workers: occupational health and safety aspects. 实验动物工作人员的免疫接种:职业健康与安全问题。
IF 4.9 4区 医学 Q1 PARASITOLOGY Pub Date : 2024-07-01 Epub Date: 2024-03-20 DOI: 10.1080/20477724.2024.2329376
Laxit K Bhatt, Jitendra H Patel, Chitrang R Shah, Sudhir R Patel, Shital D Patel, Vipul A Patel, Rajesh Sundar, Mukul R Jain

Occupational immunization is an integral part of institutional occupational safety and health (OSH) programs. Laboratory animal workers (LAWs) are personnel working with various small and large vertebrate animals. LAWs are at the risk of contracting a myriad of zoonotic infections as they are occupationally exposed to animals and their biological products. Immunizing employees against such zoonotic pathogens is the best way to prevent disease transmission. This review provides information on various zoonotic diseases, vaccines available to protect against such infections, and vaccination schedules. Certain sections of institutional occupational immunization programs such as risk evaluation, immunizing special categories of personnel and exemption from immunization among others are also described. Additionally, the authors have discussed various probable modes of impact through which occupational immunization of laboratory animal workers fulfills different United Nations Sustainable Development Goals.

职业免疫是机构职业安全与健康(OSH)计划的一个组成部分。实验动物工作人员(LAWs)是指与各种大小脊椎动物打交道的人员。由于实验室动物工作人员在工作中会接触到动物及其生物制品,因此存在感染各种人畜共患病的风险。为员工接种人畜共患病病原体疫苗是预防疾病传播的最佳方法。本综述介绍了各种人畜共患病、可用于预防此类感染的疫苗以及疫苗接种计划。还介绍了机构职业免疫计划的某些部分,如风险评估、特殊类别人员的免疫接种和免疫豁免等。此外,作者还讨论了实验动物工作人员职业免疫实现联合国可持续发展目标的各种可能影响模式。
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引用次数: 0
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Pathogens and Global Health
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