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Green synthesis and characterization of Fe2O3, ZnO and TiO2 nanoparticles and searching for their potential use as biofertilizer on sunflower Fe2O3、ZnO 和 TiO2 纳米粒子的绿色合成和表征及其作为向日葵生物肥料的潜在用途探究
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-12 DOI: 10.1007/s12298-024-01508-8
Tuğba Özgören Can, Yıldız Aydin, Güldem Utkan, Ahu Altınkut Uncuoğlu

Nanoparticles, thanks to their superior properties such as large surface area and high reactivity, can be an alternative to traditional fertilizers for improving nutrient uptake. Furthermore, considering that chemical and physical synthesis methods require high energy consumption and cause environmental pollution, plant-mediated green synthesis of NPs has attracted great attention since it provides eco-friendly, biocompatible, and inexpensive solutions. In this present study, plant mediated green synthesis of Iron Oxide (Fe2O3), Zinc Oxide (ZnO) and Titanium Dioxide (TiO2) nanoparticles by using Laurus nobilis leaves (bay leaves) were carried out and their structural properties were characterized by UV visible spectra, Dynamic Light Scattering (DLS), Fourier Transform Infrared (FTIR), X-Ray Diffraction (XRD) and Transmission Electron Microscopy (TEM). UV spectrum and FTIR analysis exhibited characteristic peaks indicating the presence of the desired NPs, while DLS analysis and TEM images confirmed that synthesized particles are in nano-scale. The potential of nanoparticles as biofertilizer in agricultural uses were assessed by investigating their effects on sunflower growth in hydroponic system. TEM images of the NP applied plant tissues proved the uptake and translocation of NPs from root to leaf. Furthermore, Fe2O3, ZnO and TiO2 NP applications on sunflower up to 5 ppm generally improved physiological growth parameters such as root length, fresh weight and leaf surface area while 20 ppm of Fe2O3 and ZnO NPs application cause a significant decrease.

Graphical abstract

纳米粒子具有大表面积和高反应活性等优越性能,可以替代传统肥料,提高养分吸收率。此外,考虑到化学和物理合成方法需要消耗大量能源并造成环境污染,植物介导的纳米粒子绿色合成因其提供了生态友好、生物兼容和成本低廉的解决方案而备受关注。本研究利用月桂叶进行了植物介导的氧化铁(Fe2O3)、氧化锌(ZnO)和二氧化钛(TiO2)纳米粒子的绿色合成,并通过紫外可见光谱、动态光散射(DLS)、傅立叶变换红外(FTIR)、X 射线衍射(XRD)和透射电子显微镜(TEM)对其结构特性进行了表征。紫外光谱和傅立叶变换红外分析显示出特征峰,表明存在所需的纳米粒子,而 DLS 分析和 TEM 图像则证实合成的粒子为纳米级。通过研究纳米颗粒在水培系统中对向日葵生长的影响,评估了其作为生物肥料在农业方面的应用潜力。应用了纳米粒子的植物组织的 TEM 图像证明了纳米粒子从根部到叶片的吸收和转移。此外,在向日葵上施用 5ppm 以下的 Fe2O3、ZnO 和 TiO2 NP 普遍提高了生理生长参数,如根长、鲜重和叶表面积,而施用 20ppm 的 Fe2O3 和 ZnO NP 则会导致生理生长参数显著下降。
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引用次数: 0
Bryophyllum pinnatum (Lam.) Oken: unravelling therapeutic potential and navigating toxicity Bryophyllum pinnatum (Lam.) Oken:揭示治疗潜力并了解毒性
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-11 DOI: 10.1007/s12298-024-01509-7
Garima Sharma, Alka Jangra, Sonia Sihag, Siddhant Chaturvedi, Shalu Yadav, Vinod Chhokar

Bryophyllum pinnatum (Lam.) Oken, a multipurpose medicinal herb, has drawn much interest for its therapeutic qualities from both traditional and modern medicine systems. Many active secondary metabolites, such as bufadienolides, triterpenes, phenols, alkaloids, glycosides, lipids, flavonoids, and organic acids, are responsible for the plant's curative properties. B. pinnatum exhibits a noteworthy significance in oncological research by exhibiting its ability to modify numerous pathways, which may suggest a potential anticancer impact. The herb is recommended for treating lithiasis, a common cause of renal failure, due to its effectiveness in dissolving stones and avoiding crystal formation. The plant has a major impact on diabetes, especially type II diabetes. Moreover, the versatility of B. pinnatum extends to its examination in connection to COVID-19. However, caution is warranted, as B. pinnatum has been reported to possess toxicity attributed to the presence of bufadienolides in its metabolic profile. A comprehensive investigation is essential to thoroughly understand and confirm the synthesis of potentially hazardous compounds. This is crucial for minimizing their presence and ensuring the safe consumption of B. pinnatum among diverse populations of organisms. This review highlights the various medical uses of B. pinnatum, including its ability to effectively treat kidney and liver diseases, as well as its anti-leishmanial, neuropharmacological, antibacterial, immunosuppressive, anti-tumour, and cytotoxic effects. While extensively employed in both traditional and scientific domains, the plant's complete medicinal potential, molecular mechanisms, safety profile, and pharmacodynamics remain ambiguous, rendering it an ideal candidate for pioneering research endeavours.

欧建兰(Bryophyllum pinnatum (Lam.) Oken)是一种多用途药材,其治疗功效引起了传统和现代医学系统的极大兴趣。许多活性次生代谢物,如布瓦本内酯、三萜类、酚类、生物碱、苷类、脂类、黄酮类和有机酸等,都是该植物具有治疗功效的原因。羽扇豆在肿瘤学研究中具有重要意义,它能够改变许多途径,这可能表明它具有潜在的抗癌作用。这种草药被推荐用于治疗肾结石,这是导致肾功能衰竭的常见原因,因为它能有效溶解结石,避免晶体形成。这种植物对糖尿病,尤其是 II 型糖尿病有重大影响。此外,羽扇豆的多功能性还延伸到与 COVID-19 有关的检查。不过,由于羽扇豆的代谢概况中含有布法二烯醇内酯,因此有报告称羽扇豆具有毒性,因此必须谨慎。全面的调查对于彻底了解和确认潜在危险化合物的合成至关重要。这对于尽量减少其存在并确保不同生物群体安全食用羽扇豆至关重要。本综述强调了羽扇豆的各种医疗用途,包括其有效治疗肾脏和肝脏疾病的能力,以及其抗利什曼病、神经药理学、抗菌、免疫抑制、抗肿瘤和细胞毒性作用。虽然该植物在传统和科学领域都被广泛使用,但其完整的药用潜力、分子机制、安全性和药效学仍不明确,因此是开拓性研究工作的理想候选对象。
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引用次数: 0
Genome-wide analysis of long non-coding RNAs involved in the fruit development process of Cucumis melo Baogua 参与瓜果发育过程的长非编码 RNA 的全基因组分析
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-08 DOI: 10.1007/s12298-024-01507-9
Ya-hui Li, Chun Liu, Run-zhe Xu, Yu-peng Fan, Ji-yuan Wang, Hu Li, Jian Zhang, Hui-jun Zhang, Jing-jing Wang, Da-kui Li

Melon (Cucumis melo L.) is a horticultural crop that is planted globally. Cucumis melo L. cv. Baogua is a typical melon that is suitable for studying fruit development because of its ability to adapt to different climatic conditions. Long non-coding RNAs (lncRNAs) are a class of non-coding RNAs longer than 200 nucleotides, which play important roles in a wide range of biological processes by regulating gene expression. In this study, the transcriptome of the Baogua melon was sequenced at three stages of the process of fruit development (14 days, 21 days, and 28 days) to study the role of lncRNAs in fruit development. The cis and trans lncRNAs were subsequently predicted and identified to determine their target genes. Notably, 1716 high-confidence lncRNAs were obtained in the three groups. A subsequent differential expression analysis of the lncRNAs between the three groups revealed 388 differentially expressed lncRNAs. A total of 11 genes were analyzed further to validate the transcriptome sequencing results. Interestingly, the MELO3C001376.2 and MSTRG.571.2 genes were found to be significantly (P < 0.05) downregulated in the fruits. This study provides a basis to better understand the functions and regulatory mechanisms of lncRNAs during the development of melon fruit.

甜瓜(Cucumis melo L.)是一种全球种植的园艺作物。Cucumis melo L. cv. Baogua是一种典型的甜瓜,因其能够适应不同的气候条件而适合研究果实发育。长非编码 RNA(lncRNA)是一类长度超过 200 个核苷酸的非编码 RNA,通过调控基因表达在多种生物过程中发挥重要作用。本研究对宝瓜果实发育过程中三个阶段(14天、21天和28天)的转录组进行了测序,以研究lncRNA在果实发育过程中的作用。随后对顺式和反式 lncRNA 进行了预测和鉴定,以确定其靶基因。值得注意的是,三组共获得了1716个高置信度的lncRNA。随后对三组之间的 lncRNA 进行差异表达分析,发现了 388 个差异表达的 lncRNA。为验证转录组测序结果,共对11个基因进行了进一步分析。有趣的是,在果实中发现 MELO3C001376.2 和 MSTRG.571.2 基因被显著下调(P < 0.05)。这项研究为更好地理解lncRNA在甜瓜果实发育过程中的功能和调控机制提供了依据。
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引用次数: 0
Genome‑wide identification of the SWEET gene family in grape (Vitis vinifera L.) and expression analysis of VvSWEET14a in response to water stress 葡萄(Vitis vinifera L.)SWEET 基因家族的全基因组鉴定以及 VvSWEET14a 对水分胁迫响应的表达分析
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-07 DOI: 10.1007/s12298-024-01501-1
Kangqi Geng, Zhennan Zhan, Xiaobin Xue, Chenyang Hou, Dongmei Li, Zhenping Wang

Sugars are considered primary metabolites that determine the flavor and quality of grape berries, also playing a crucial role in the plants to resist stress. Sugars Will Eventually be Exported Transporters (SWEETs) gene family has been previously reported to be involved in the growth and development of grape, while the changes in transcriptional levels under water stress remain unclear. In this study, sixteen grape SWEETs members were identified and annotated based on their homologous genes in Arabidopsis and tomato, they were classified into four clades (Clades I to IV) with VvSWEETs by phylogenetic analysis. The highly conserved motifs and gene structures of VvSWEETs indicate that they are closely evolutionary conservation. Chromosomal localization and synteny analysis found that VvSWEETs were unevenly distributed on 11 chromosomes, and the VvSWEET5a, VvSWEET5b, VvSWEET14b and VvSWEET14c existed a relatively recent evolutionary relationship. Promoter cis-acting elements showed that the clade III has more ABRE motif, especially the VvSWEET14a. The regulation of VvSWEETs is mainly influenced by the Dof and MYB families, which are associated with grape ripening, while VvSWEET14a is closely related to the bHLH, MYB, NAC, and bZIP families. RT-qPCR data and subcellular localization show that VvSWEET14a was highly induced under early water stress and is located in the vacuole membrane. The instantaneous transformation assay identified that this gene could promote to transport hexose in the vacuole to maintain normal osmotic pressure. In summary, our study provides a basis for further research on SWEET genes function and regulatory mechanism in the future, and lays the foundation for stress resistance breeding of Vitis vinifera.

糖类被认为是决定葡萄果实风味和品质的主要代谢物,在植物抗逆中也起着至关重要的作用。据报道,糖类最终将被出口转运体(SWEETs)基因家族参与了葡萄的生长和发育,但其在水分胁迫下的转录水平变化仍不清楚。本研究根据拟南芥和番茄中的同源基因,鉴定并注释了 16 个葡萄 SWEETs 成员,并通过系统发育分析将它们与 VvSWEETs 分成四个支系(支系 I 至 IV)。VvSWEETs 的高度保守的基序和基因结构表明它们具有密切的进化保守性。染色体定位和同源关系分析发现,VvSWEETs在11条染色体上分布不均,VvSWEET5a、VvSWEET5b、VvSWEET14b和VvSWEET14c存在较近的进化关系。启动子顺式作用元件显示,支系 III 有较多的 ABRE motif,尤其是 VvSWEET14a。VvSWEETs 的调控主要受与葡萄成熟相关的 Dof 和 MYB 家族的影响,而 VvSWEET14a 则与 bHLH、MYB、NAC 和 bZIP 家族密切相关。RT-qPCR 数据和亚细胞定位显示,VvSWEET14a 在早期水分胁迫下被高度诱导,并位于液泡膜中。瞬时转化试验表明,该基因可促进液泡中己糖的运输,以维持正常的渗透压。综上所述,我们的研究为今后进一步研究 SWEET 基因的功能和调控机制提供了依据,为葡萄抗逆育种奠定了基础。
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引用次数: 0
Molecular cloning and functional characterization in response to saline-alkali stress of the MhZEP gene in Arabidopsis thaliana 拟南芥 MhZEP 基因对盐碱胁迫的分子克隆和功能鉴定
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-05 DOI: 10.1007/s12298-024-01495-w
Yongjuan Dong, Lei Du, Zhongxing Zhang, Jiao Cheng, Yanlong Gao, Xiaoya Wang, Yuxia Wu, Yanxiu Wang

Soil salinization is one of the major environmental factors that restrict plant growth and development. Zeaxanthin epoxidase (ZEP) functions in ABA biosynthesis and the xanthophyll cycle and has a vital role in plant responses to various environmental stresses. It was found by quantitative real-time PCR (qRT-PCR) that MhZEP responded to saline-alkali stress and showed the highest expression at 48 h of saline-alkali stress, which was 14.53-fold of 0 h. The MhZEP gene was cloned from the apple rootstock begonia (Malus halliana Koehne) and its protein physicochemical properties were analyzed. Subsequently, the functional characterization of MhZEP (ID: 103403091) was further investigated in Arabidopsis thaliana. The MhZEP contained a complete open reading frame with a length of 1998 bp, and encoded 665 amino acids with an isoelectric point of 7.18. Phylogenetic tree analysis showed that MhZEP was the most homologous and closely related to Glycine max. Compared with wild-type, transgenic plants grew better under saline-alkali stress and the MhZEP-OE line showed higher chlorophyll content, carotenoid content, enzyme activities (POD, SOD, CAT and APX) and K+ content, whereas they had lower chlorosis and Na+ content than the wild type (WT), which indicated that they had strong resistance to stress. The expression levels of saline-alkali stress-related genes in A. thaliana MhZEP-OE were examined by qRT-PCR, and it was found that the MhZEP improved the tolerance of A. thaliana to saline-alkali stress tolerance by regulating the expression of carotenoid synthesis genes (MhPSY, MhZDS, MhLYCB and MhVDE) and ABA biosynthesis genes (MhNCED5, MhABI1 and MhCYP707A2). And the potassium-sodium ratio in the cytoplasm was increased to maintain ionic homeostasis by modulating the expression of Na+ transporter genes (MhCHX15 and MhSOS1) and K+ transporter genes (MhHKT1;1, MhNHX1 and MhSKOR1). Moreover, the expression of H+-ATPase genes (MhAHA2 and MhAHA8) was increased to reduce the oxidative damage caused by saline-alkali stress. In summary, MhZEP acted as an essential role in plant resistance to saline-alkali stress, which lays the foundation for further studies on its function in apple.

土壤盐碱化是限制植物生长和发育的主要环境因素之一。玉米黄质环氧化物酶(ZEP)在 ABA 生物合成和黄绿素循环中发挥作用,在植物应对各种环境胁迫中起着重要作用。通过实时定量 PCR(qRT-PCR)研究发现,MhZEP 对盐碱胁迫有响应,在盐碱胁迫 48 h 时表达量最高,是 0 h 时的 14.53 倍。随后,在拟南芥中进一步研究了 MhZEP(ID:103403091)的功能特性。MhZEP 包含一个完整的开放阅读框,长度为 1998 bp,编码 665 个氨基酸,等电点为 7.18。系统发生树分析表明,MhZEP 与 Glycine max 的同源性最高,亲缘关系最密切。与野生型相比,转基因植株在盐碱胁迫下生长较好,MhZEP-OE品系的叶绿素含量、类胡萝卜素含量、酶活性(POD、SOD、CAT和APX)和K+含量均高于野生型,而叶绿素沉降和Na+含量低于野生型,表明其具有较强的抗逆性。通过qRT-PCR检测了MhZEP-OE中盐碱胁迫相关基因的表达水平,发现MhZEP通过调控类胡萝卜素合成基因(MhPSY、MhZDS、MhLYCB和MhVDE)和ABA生物合成基因(MhNCED5、MhABI1和MhCYP707A2)的表达,提高了大叶黄杨对盐碱胁迫的耐受性。通过调节 Na+转运体基因(MhCHX15 和 MhSOS1)和 K+转运体基因(MhHKT1;1、MhNHX1 和 MhSKOR1)的表达,增加细胞质中的钾钠比,以维持离子平衡。此外,H+-ATPase 基因(MhAHA2 和 MhAHA8)的表达也有所增加,从而减轻了盐碱胁迫造成的氧化损伤。总之,MhZEP在植物抵抗盐碱胁迫的过程中发挥了重要作用,这为进一步研究其在苹果中的功能奠定了基础。
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引用次数: 0
Comparative omics-based characterization, phylogeny and melatonin-mediated expression analyses of GDSL genes in pitaya (Selenicereus undatus L.) against multifactorial abiotic stresses 基于omics的番木瓜(Selenicereus undatus L.)抗多因素非生物胁迫的GDSL基因特征、系统发育和褪黑激素介导的表达比较分析
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-05 DOI: 10.1007/s12298-024-01506-w
Obaid Ullah Shah, Jiantao Peng, Lingling Zhou, Wasi Ullah Khan, Zhang Shanshan, Pan Zhuyu, Pingwu Liu, Latif Ullah Khan

The GDSL gene family plays diverse roles in plant growth and development. Despite its significance, the functions of the GDSL in the pitaya plant are still unknown. Pitaya (Selenicereus undatus L.) also called Hylocereus undatus (Hu), belongs to the family Cactaceae and is an important tropical plant that contains high dietary fibers and antioxidants. In the present investigation, we screened 91 HuGDSL genes in the pitaya genome by conducting a comprehensive computational analysis. The phylogenetic tree categorized HuGDSL genes into 9 distinct clades in combination with four other species. Further, 29 duplicate events were identified of which 12 were tandem, and 17 were segmental. The synteny analysis revealed that segmental duplication was more prominent than tandem duplication among these genes. The majority of duplicated gene pairs (95%) indicate their Ka/Ks ratios ranging from 0.1 to 0.3, which shows that maximum HuGDSL genes were under purifying selection pressure. The cis-acting element in the promotor region contains phytohormones such as auxin, gibberellin, jasmonic acid, and abscisic acid abundantly. Finally, the HuGDSL gene expression pattern under single and multiple stresses was analyzed via; RNA-seq. We select ten stress-responsive HuGDSL genes for RT-qPCR validation. After careful investigation, we identified five HuGDSL candidate genes (HuGDSL-1/3/55/59, and HuGDSL-78) based on RNA-seq, and RT-qPCR data that showed enhanced expression in stress and melatonin-applied seedlings. This study represents valuable insights into maintaining pitaya growth and development by preparing stress-resilient pitaya genotypes through modern biotechnological techniques.

GDSL 基因家族在植物生长和发育过程中发挥着多种作用。尽管意义重大,但 GDSL 在番木瓜植物中的功能仍然未知。番木瓜(Selenicereus undatus L.)又称 Hylocereus undatus(Hu),属于仙人掌科,是一种重要的热带植物,含有大量膳食纤维和抗氧化剂。在本研究中,我们通过综合计算分析筛选了番木瓜基因组中的 91 个 HuGDSL 基因。系统发生树将 HuGDSL 基因与其他 4 个物种划分为 9 个不同的支系。此外,还发现了 29 个重复事件,其中 12 个是串联的,17 个是片段的。同源关系分析表明,在这些基因中,节段重复比串联重复更为突出。大多数重复基因对(95%)的 Ka/Ks 比率在 0.1 至 0.3 之间,这表明 HuGDSL 基因最大程度地受到了纯化选择压力。启动子区域的顺式作用元件含有丰富的植物激素,如辅助素、赤霉素、茉莉酸和脱落酸等。最后,通过RNA-seq分析了单胁迫和多胁迫下HuGDSL基因的表达模式。我们选择了十个胁迫响应的 HuGDSL 基因进行 RT-qPCR 验证。经过仔细研究,我们根据 RNA-seq 和 RT-qPCR 数据确定了五个 HuGDSL 候选基因(HuGDSL-1/3/55/59 和 HuGDSL-78),这些基因在胁迫和施用褪黑激素的幼苗中表达增强。这项研究为通过现代生物技术制备抗逆性番木瓜基因型来维持番木瓜的生长和发育提供了宝贵的见解。
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引用次数: 0
PlPOD45 positively regulates high-temperature tolerance of herbaceous peony by scavenging reactive oxygen species PlPOD45 通过清除活性氧积极调节草本牡丹的耐高温性
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-28 DOI: 10.1007/s12298-024-01505-x
Yi Qian, Ziao Hu, Zhuoya Cheng, Jun Tao, Daqiu Zhao

Herbaceous peony (Paeonia lactiflora Pall.) is a widely used famous traditional flower in China. It prefers cold and cool climate, but is not resistant to high temperature during summer in the middle and lower reaches of the Yangtze River. Previously, we found peroxidase (POD) is an important antioxidant enzyme that played an important role in high-temperature tolerance of P. lactiflora. The present study isolated the candidate gene PlPOD45 and verified its function in resisting high-temperature stress. And the results showed that PlPOD45 had an open reading frame of 978 bp that encoded 325 amino acids. Its protein was localized to the cell membrane and cytoplasm. High-temperature stress induced PlPOD45 expression. Heterologous overexpression of PlPOD45 improved plant tolerance to high-temperature stress, decreased reactive oxygen species (ROS) accumulation, relative electrical conductivity and malondialdehyde content, and increased the ratio of variable fluorescence to highest fluorescence and POD activity. Conversely, silencing PlPOD45 in P. lactiflora could decrease POD activity, ROS scavenging capability and cell membrane stability when these plants were exposed to high-temperature stress. These results suggest that PlPOD45 positively regulates high-temperature tolerance through ROS scavenging, which would provide a theoretical basis for improving high-temperature tolerance in P. lactiflora.

草本牡丹(Paeonia lactiflora Pall.)它喜冷凉气候,但在长江中下游地区不耐夏季高温。此前,我们发现过氧化物酶(POD)是一种重要的抗氧化酶,在乳白花椰菜耐高温过程中发挥着重要作用。本研究分离了候选基因 PlPOD45,并验证了其在抗高温胁迫中的功能。结果表明,PlPOD45的开放阅读框为978 bp,编码325个氨基酸。其蛋白质定位于细胞膜和细胞质。高温胁迫诱导了 PlPOD45 的表达。异源过表达 PlPOD45 提高了植物对高温胁迫的耐受性,降低了活性氧(ROS)积累、相对电导率和丙二醛含量,增加了可变荧光与最高荧光的比率和 POD 活性。相反,当乳花草暴露于高温胁迫时,沉默 PlPOD45 可降低其 POD 活性、ROS 清除能力和细胞膜稳定性。这些结果表明,PlPOD45通过清除ROS对耐高温性具有正向调节作用,这将为提高乳花草的耐高温性提供理论依据。
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引用次数: 0
Genome-wide identification of bHLH transcription factors in Kenaf (Hibiscus cannabinus L.) and gene function analysis of HcbHLH88 Kenaf (Hibiscus cannabinus L.) 中 bHLH 转录因子的全基因组鉴定及 HcbHLH88 的基因功能分析
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-28 DOI: 10.1007/s12298-024-01504-y
Jiao Yue, Yuqi Tan, Rujian Wei, Xu Wang, Samavia Mubeen, Canni Chen, Shan Cao, Caijin Wang, Peng Chen

Among plants' transcription factor families, the bHLHs family has a significant influence on plant development processes and stress tolerance. However, there have been no relevant studies performed on the bHLHs family in kenaf (Hibiscus cannabinus L). Here, the bHLH transcription factors in kenaf were found using bioinformatics, and a total of 141 kenaf HcbHLH transcription factors were identified. Phylogenetic analysis revealed that these transcription factors were irregularly distributed on 18 chromosomes and separated into 20 subfamilies. Additionally, utilizing the transcriptome data under diverse abiotic pressures, the expression of HcbHLH members was analyzed under different stress conditions. A typical HcbHLH abiotic stress transcription factor, HcbHLH88, was exposed to salt, drought, heavy metals, and ABA. The findings revealed that HcbHLH88 might be activated under salt, drought, cadmium stress, and ABA conditions. Furthermore, HcbHLH88's function under salt stress conditions was studied after it was silenced using the virus-induced gene silencing (VIGS) technique. Reduced antioxidant enzyme activity and stunted plant development were seen in VIGS-silenced seedlings. Stress-related genes were shown to be considerably downregulated in the HcbHLH88-silenced kenaf plants, according to the qRT-PCR study. In conclusion, this study provides the first systematic gene family analysis of the kenaf bHLH gene family and provides a preliminary validation of the salt tolerance function of the HcbHLH88 gene. This study lays the foundation for future research on the regulatory mechanisms of bHLH genes in response to abiotic stresses.

在植物的转录因子家族中,bHLHs 家族对植物的发育过程和抗逆性有重要影响。然而,目前还没有关于剑麻(Hibiscus cannabinus L)中 bHLHs 家族的相关研究。在此,我们利用生物信息学方法发现了剑麻中的 bHLH 转录因子,共鉴定出 141 个剑麻 HcbHLH 转录因子。系统进化分析表明,这些转录因子不规则地分布在 18 条染色体上,并分成 20 个亚科。此外,利用不同非生物压力下的转录组数据,分析了不同胁迫条件下 HcbHLH 成员的表达情况。一个典型的 HcbHLH 非生物胁迫转录因子 HcbHLH88 暴露于盐、干旱、重金属和 ABA 的胁迫。研究结果表明,HcbHLH88可能在盐、干旱、镉胁迫和ABA条件下被激活。此外,还利用病毒诱导基因沉默(VIGS)技术研究了HcbHLH88在盐胁迫条件下的功能。在 VIGS 沉默的幼苗中,抗氧化酶活性降低,植株发育不良。qRT-PCR 研究表明,在 HcbHLH88 被沉默的剑麻植株中,应激相关基因被大大下调。总之,本研究首次对剑麻 bHLH 基因家族进行了系统的基因家族分析,并初步验证了 HcbHLH88 基因的耐盐功能。这项研究为今后研究 bHLH 基因对非生物胁迫的调控机制奠定了基础。
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引用次数: 0
Insights on physiological, antioxidant and flowering response to salinity stress of two candidate ornamental species: the native coastal geophytes Pancratium maritimum L. and Eryngium maritimum L 两个候选观赏物种对盐度胁迫的生理、抗氧化和开花反应的见解:原生沿海地生植物海洋蕨(Pancratium maritimum L.)和海洋柃(Eryngium maritimum L.
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-27 DOI: 10.1007/s12298-024-01502-0
Marcello Dante Cerrato, Pere Miquel Mir-Rosselló, Iván Cortés-Fernández, Arnau Ribas-Serra, Cyril Douthe, Carles Cardona, Antoni Sureda, Jaume Flexas, Lorenzo Gil Vives

Increasing seawater influence in coastal areas is an ongoing environmental issue. Gardening is a widespread activity mainly in touristic areas such as the Mediterranean coasts. However, the use of exotic species well adapted to salinity encompasses the risk of invasive species introduction. This study aimed to evaluate salinity tolerance of native geophytes, Pancratium maritimum L. and Eryngium maritimum L., to assess their use as ornamental species in salt affected coastal areas. Experiments were conducted using cultivated plants for flowering response and physiological and enzymatic antioxidant response. Six treatments were applied for two months, exposing plants to seawater (SW) dilutions (Tap-Water, 6.25%SW, 12.5%SW, 25%SW, 50%SW and 100%SW). Taxa decreased inflorescence production being this effect more architectonical in E. maritimum and affecting all inflorescence integrity in P. maritimum. Flowering time was strongly delayed and reduced in P. maritimum, while E. maritimum showed smaller effects among treatments. Physiological and biochemical response showed at moderate salinity levels (1/4SW) variation concomitant with late stress response and senescence in P. maritimum, with decreased water use efficiency, NPQ values, and enzymatic activity, and increased malondialdehyde (MDA) levels. In contrast, E. maritimum showed early stress response with steady gas exchange response, increasing NPQ values and catalase (CAT) and superoxide dimutase (SOD) activity, and decreasing MDA levels with salinity. Glutathione enzymes showed limited participation in both species. The results of this study suggest that neither species can be classified as halophytes, but they exhibit tolerance to low and moderate salinity levels, making them suitable for ornamental use.

海水对沿海地区的影响越来越大,这是一个持续存在的环境问题。园艺是一项广泛的活动,主要是在地中海沿岸等旅游区。然而,使用非常适应盐度的外来物种会带来物种入侵的风险。本研究旨在评估本地地生植物海洋蕨(Pancratium maritimum L.)和海洋苣苔(Eryngium maritimum L.)的耐盐性,以评估它们在受盐分影响的沿海地区作为观赏物种的用途。实验使用栽培植物进行开花反应以及生理和酶抗氧化反应的研究。将植物置于海水稀释液(自来水、6.25%SW、12.5%SW、25%SW、50%SW 和 100%SW)中,进行了为期两个月的六种处理。分类群降低了花序的产量,这种影响在 E. maritimum 中更多地表现为结构上的,而在 P. maritimum 中则影响到所有花序的完整性。海红花(P. maritimum)的花期明显推迟和缩短,而海白花(E. maritimum)在不同处理间的影响较小。在中等盐度水平(1/4SW)下,海红花(P. maritimum)的生理和生化反应随后期胁迫反应和衰老而变化,水分利用效率、NPQ 值和酶活性降低,丙二醛(MDA)水平升高。相比之下,E. maritimum 表现出早期应激反应,气体交换反应稳定,NPQ 值、过氧化氢酶(CAT)和超氧化物歧化酶(SOD)活性增加,MDA 水平随盐度降低。两种植物的谷胱甘肽酶参与程度有限。研究结果表明,这两个物种都不能被归类为盐生植物,但它们都表现出对低度和中度盐度的耐受性,因此适合用于观赏。
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引用次数: 0
Exploring novel SNPs and candidate genes associated with seed allometry in Pisum sativum L. 探索与 Pisum sativum L.种子异构相关的新型 SNPs 和候选基因
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-19 DOI: 10.1007/s12298-024-01499-6
Bhubneshwari Khajuria, Prakriti Rajput, Rehana Chowdhary, Mohammad Urfan, Shubham Sharma, Haroon Rashid Hakla, Sikander Pal Choudhary

Seed size is an important agronomic trait that indicates seed quality. In legumes, pods with equal and larger seeds remain the first preference of farmers and consumers. Genetic understanding related to seed size including seed allometric traits has been limited in the case of peas. To fill this void the findings presented here used the genome-wide association studies (GWAS) to identify novel candidate gene(s) putatively linked with seed size in Pisum sativum L. The study was conducted on 240 Pea Single Plant Plus Collection (PSPPC) panels of pea germplasm. Allometric traits measured included seed_length, seed_width, seed_thickness, seed_volume, seed_biomass, and seed_biomass by volume (SB_V). GWAS was performed using the Genome Association and Prediction Integrated Tool (GAPIT) on R-studio. The Bayesian information and Linkage-disequilibrium Iteratively Nested Keyway (BLINK) model provided significant single nucleotide polymorphisms (SNPs) linked with all the seed allometric traits. When analyzed the genomic regions of these SNPs provided a list of candidate genes that may be related to seed size. The present study thus provides a list of significant SNPs and relevant genes viz. Psat2g072000 for seed_length, Psat4g104320 for seed_width, Psat6g125800 and Psat6g125840 for seed_thickness, Psat6g228320 for seed_volume, Psat2g143920 for seed_biomass, and Psat2g120400 for SB_V which may prove useful in the improvement of pea seed size using breeding programs or CRISPR intervention. Understanding the genetic basis of seed size could lead to crop development with desirable seed characteristics, such as equal and larger-sized seeds with maximum yield and higher nutritional content.

种子大小是表示种子质量的一个重要农艺性状。在豆科植物中,荚果大小相等、种子更大的种子仍然是农民和消费者的首选。对豌豆种子大小(包括种子异速性状)的遗传学了解还很有限。为了填补这一空白,本文介绍的研究结果利用全基因组关联研究(GWAS)确定了与豌豆种子大小相关的新型候选基因。测量的异速性状包括种子长度、种子宽度、种子厚度、种子体积、种子生物量和种子体积生物量(SB_V)。利用 R-studio 上的基因组关联与预测集成工具(GAPIT)进行了 GWAS 分析。贝叶斯信息和连锁失衡迭代嵌套关键路径(BLINK)模型提供了与所有种子测定性状相关的重要单核苷酸多态性(SNPs)。对这些 SNP 的基因组区域进行分析后,提供了可能与种子大小有关的候选基因列表。因此,本研究提供了一个重要的 SNPs 和相关基因列表,即 Psat2g072000(种子长度)、Psat4g104320(种子宽度)、Psat6g125800 和 Psat6g125840(种子厚度)、Psat6g228320(种子体积)、Psat2g143920(种子生物量)和 Psat2g120400(SB_V)。了解种子大小的遗传基础可以培育出具有理想种子特性的作物,如具有最高产量和更高营养成分的等大种子。
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引用次数: 0
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Physiology and Molecular Biology of Plants
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