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Suspensaditerpenes A–Q, anti-inflammatory labdane and nor-labdane diterpenoids from the seeds of Forsythia suspensa 连翘种子中悬浮液萜类A-Q、抗炎液丹和非悬浮液丹二萜类。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-26 DOI: 10.1016/j.phytochem.2025.114688
Hui-Ying Li , Meng-Yu Bao , Hao-Ming Xiong , Can-Can Wang , Li-Ping Bai , Wei Zhang , Cheng-Yu Chen , Zhi-Hong Jiang , Guo-Yuan Zhu
Phytochemical investigation of the seeds of Forsythia suspensa resulted in the isolation and characterization of 17 undescribed labdane and nor-labdane diterpenoids, named suspensaditerpenes A−Q (117), along with 13 known ones (1830). Their structures were elucidated by a combination of NMR, HR-MS, and X-ray diffraction analyses. Structurally, 5, 10, and 13 are labdane diterpenoids featuring a lactone ring at the side chain, marking their first description in F. suspensa. Compounds 4, 14, 15, and 25 are 14,15-dinor-diterpenoids, among which 14 and 15 have a rare 6/6/5 ring skeleton. Furthermore, all known compounds were isolated from F. suspensa for the first time. The in vitro anti-inflammatory activities assay showed that 5, 8, 13, and 14 significantly inhibited the LPS-induced NO production at 20 μM in LPS-induced RAW264.7 cells, while the remaining 24 compounds demonstrated slight NO inhibitory activity. Further studies showed that 5 suppressed the LPS-induced expression of iNOS, p-p65, and NLRP3 proteins as well as NF-κB nuclear translocation in RAW264.7 cells.
对连翘(Forsythia suspensa)种子进行了植物化学研究,分离并鉴定了17种未描述的双萜和非双萜,命名为suspensaditerpenes A-Q(1-17),以及13种已知的双萜(18-30)。通过核磁共振、质谱和x射线衍射分析对其结构进行了鉴定。从结构上看,5、10和13是在侧链上有一个内酯环的唇丹二萜,这是它们在悬钩子中首次被描述。化合物4、14、15和25为14,15-二萜,其中14和15具有罕见的6/6/5环骨架。所有已知化合物均为首次从该菌中分离得到。体外抗炎活性实验结果显示,5、8、13和14明显抑制lps诱导的RAW264.7细胞20 μM的NO生成,其余24个化合物表现出轻微的NO抑制活性。进一步研究表明,5抑制lps诱导的RAW264.7细胞中iNOS、p-p65、NLRP3蛋白的表达以及NF-κB核易位。
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引用次数: 0
Isolation, characterization, and anti-neuroinflammatory activity of sesquiterpenoids from Pogostemon esquirolii 广藿香倍半萜类化合物的分离、表征及抗神经炎活性研究。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-25 DOI: 10.1016/j.phytochem.2025.114685
Yebi Qin , Xinyan Shao , Yinzheng Xie , Hailin Lu , Kaien Chen , Xi Zheng , Guodong Chen , Lishe Gan , Song Ang , Dongli Li
The phytochemical assessment of Pogostemon esquirolii resulted in the isolation and identification of sixteen sesquiterpenoids, including eudesmane-type (16, 9, and 11), bisabolane-type (8 and 10), caryolane-type (1314), guaiacane-type (1516), and other types (7 and 12). Of them, compounds 110, namely pogostesquines A–J, are ten previously undescribed ones. Compound 7 possessed an unusual backbone with the isopropyl group substituted at C-8 instead of C-7. Their structures were confirmed by extensive spectroscopic analysis, single-crystal X-ray diffraction analysis, and ECD calculations. All the compounds were reported from this plant for the first time. Biological evaluation revealed that compound 4 exhibited the most anti-neuroinflammatory activity by inhibiting NO production in LPS-induced BV2 mouse microglial cells. Subsequently, network pharmacology analyses indicated that compound 4 primarily alleviated neuroinflammation-induced cognitive dysfunction through the TNF signaling pathway. Molecular docking studies, molecular dynamics simulations techniques, and western blotting analysis further clarified that compound 4 could downregulate the expression of TNF-α and IL-6, and inhibit the activity of inflammation-associated inducible enzymes iNOS and COX-2. Concurrently, it was further demonstrated that compound 4 could inhibit the activation of NF-κB and MAPK signaling pathways via the TNF pathway.
对大藿香进行植物化学鉴定,分离鉴定出16种倍半萜类化合物,其中尤达木烷型(1-6、9和11)、双abolane型(8和10)、卡萝烷型(13-14)、愈创木烷型(15-16)和其他类型(7和12)。其中,化合物1-10,即pogostesquines A-J,是以前描述过的10种化合物。化合物7具有一个不寻常的主链,在C-8取代了异丙基而不是C-7。通过广泛的光谱分析、单晶x射线衍射分析和ECD计算证实了它们的结构。所有化合物均为首次从该植物中分离得到。生物学评价表明,化合物4通过抑制lps诱导的BV2小鼠小胶质细胞NO的产生,表现出最强的抗神经炎活性。随后,网络药理学分析表明,化合物4主要通过TNF信号通路缓解神经炎症诱导的认知功能障碍。分子对接研究、分子动力学模拟技术和western blotting分析进一步证实,化合物4可以下调TNF-α和IL-6的表达,抑制炎症相关诱导酶iNOS和COX-2的活性。同时,进一步证明化合物4可以通过TNF途径抑制NF-κB和MAPK信号通路的激活。
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引用次数: 0
Phytochemical and biological studies on rare and endangered plants endemic to China. Part XLVII. Sesquiterpene lactones from the leaves of Michelia opipara and their anti-inflammation effects 中国特有珍稀濒危植物的植物化学生物学研究。因一部分。含笑叶倍半萜内酯及其抗炎作用。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-25 DOI: 10.1016/j.phytochem.2025.114687
Jiang Wan , Xin Chen , Can Wang , Ying-Peng Tong , Yeun-Mun Choo , Xiao-Fei Shen , Yu-Feng Wang , Chun-Xiao Jiang , Jin-Feng Hu
Six previously undescribed mono-acetylated sesquiterpene lactones (named opiparolides A‒F, 16, resp.), along with five structurally related known compounds, were isolated and characterized from the renewable leaves of the endangered Chinese endemic plant Michelia opipara (family Magnoliaceae) using an LC-MS/MS-based Ion Identity Molecular Networking (IIMN) strategy in combination with conventional chromatographic techniques. The chemical structures and absolute configurations of the compounds were unambiguously determined through comprehensive analyses, including NMR spectroscopy, high-resolution electrospray ionization mass spectrometry (HRESIMS), GIAO-based NMR calculations with DP4+ analysis, and electronic circular dichroism (ECD) spectroscopy. Opiparolides A (1) and B (2) were identified as germacrane-type sesquiterpene lactones characterized by a typical α-methylene-γ-lactone moiety, while opiparolides C–F (36) are classified as C-15-functionalized eudesmane-type sesquiterpene lactones containing an α,β-unsaturated pentatomic lactone ring. Compounds 16 were evaluated for their inhibitory activity against LPS-induced nitric oxide (NO) production in RAW 264.7 macrophages, exhibiting IC50 values ranging from 8.6 to 16.8 μM. The interactions of sesquiterpene lactones 1 and 6 with the NO signaling pathway were examined through molecular docking studies. Moreover, molecular dynamics simulations further explored the structure and molecular properties of compound 6-iNOS complex. The findings highlight the critical importance of preserving plant species diversity as a reservoir for chemically diverse natural products with potential therapeutic applications in inflammation treatment.
采用LC-MS/MS-based离子识别分子网络(IIMN)技术,结合传统色谱技术,从中国濒危特有植物木兰花(木兰科)可再生叶片中分离鉴定了6个先前未被描述的单乙酰化倍半萜内酯(命名为opiparolides A-F, 1-6, resp.)和5个结构相关的已知化合物。通过核磁共振光谱、高分辨率电喷雾质谱(hresms)、基于giao的核磁共振计算(DP4+分析)和电子圆二色性(ECD)光谱等综合分析,明确了化合物的化学结构和绝对构型。经鉴定,Opiparolides A(1)和B(2)为典型的α-亚甲基-γ-内酯型倍半萜内酯,而Opiparolides C-F(3-6)为含有α,β-不饱和五原子内酯环的c -15功能化的eudesmane型倍半萜内酯。化合物1-6对lps诱导的RAW 264.7巨噬细胞产生一氧化氮(NO)的抑制活性进行了评价,其IC50值为8.6 ~ 16.8 μM。通过分子对接研究,研究倍半萜内酯1和6与NO信号通路的相互作用。此外,分子动力学模拟进一步探讨了化合物6-iNOS配合物的结构和分子性质。这些发现强调了保护植物物种多样性作为化学多样性天然产物的储存库的重要性,这些天然产物在炎症治疗中具有潜在的治疗应用。
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引用次数: 0
Hop bitter acids from the pistillate flower of Humulus lupulus L. and their anti-inflammatory and anti-dengue virus activities 葎草雌蕊花啤酒花苦酸及其抗炎和抗登革病毒活性。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-25 DOI: 10.1016/j.phytochem.2025.114689
Biao Sun , Yun-Lin Ao , Xia Cao , Jia-Bing Zhang , Xia Zhang , Dong-Hao Lu , Man Lin , Jun-Shan Liu , Xiao-Qi Zhang
Nine undescribed hop bitter acids, humulupulones A–I (19), along with three known ones (1012) were isolated from the pistillate flower of Humulus lupulus L. (hops). Structurally, compounds 1 and 2 possess an unprecedented nitrogen-containing skeleton in α-acids, and this is the first time that nitrogen has replaced oxygen at the same position, thereby forming a new skeleton consisting of a fused α-acid and a dimethyl-substituted pyridine. Compound 3 is a rare pyridine-2,4-dione derivative simultaneously incorporating prenyl and isopropyl moieties. Compounds 710 were separated into four pairs of enantiomers by chiral HPLC separation. Their structures were unambiguously established by comprehensive spectroscopic analysis, X-ray crystallography, and ECD calculations. Moreover, compounds 2, 4, and 7 exhibited significant anti-inflammatory activities in the CuSO4-induced zebrafish inflammation model. Compounds 4, 5, 710 and 12 possessed significant anti-dengue virus (DENV) activities at the viral adsorption and entry stages with IC50 values ranging from 0.29 μM to 70.09 μM, while compounds 7, 10, and 11 exerted anti-DENV activities at the viral replication stage with IC50 values of 71.47 ± 7.30, 19.36 ± 6.77, and 16.18 ± 3.49 μM, respectively.
从葎草(Humulus lupulus L.,啤酒花)的雌蕊花中分离出九种未描述的啤酒花苦味酸,humulupulones A-I(1-9)和三种已知的啤酒花苦味酸(10-12)。在结构上,化合物1和2具有α-酸中前所未有的含氮骨架,这是氮首次在同一位置取代氧,从而形成由融合α-酸和二甲基取代吡啶组成的新骨架。化合物3是一种罕见的吡啶-2,4-二酮衍生物,同时含有戊烯基和异丙基。化合物7 ~ 10通过手性高效液相色谱分离成4对对映体。通过全面的光谱分析、x射线晶体学和ECD计算,明确了它们的结构。此外,化合物2、4和7在cuso4诱导的斑马鱼炎症模型中表现出显著的抗炎活性。化合物4、5、7-10和12在病毒吸附和进入阶段具有较强的DENV活性,IC50值为0.29 ~ 70.09 μM;化合物7、10和11在病毒复制阶段具有较强的DENV活性,IC50值分别为71.47±7.30、19.36±6.77和16.18±3.49 μM。
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引用次数: 0
Bioactive specialized metabolites of Trochila sp., an endophytic fungus of Lilium carniolicum 百合内生真菌Trochila sp.的生物活性特化代谢产物。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-24 DOI: 10.1016/j.phytochem.2025.114684
Mostafa Alilou , Yun Liu , Magdalena Steixner , Isidor Happacher , Sigrid Beate Abt , Ursula Fürnkranz , Fabio Gsaller , Ursula Peintner , Hubertus Haas
Bioprospecting of a rice culture of Trochila sp. BGP15P7IS3, an undescribed endophytic fungus from Lilium carniolicum, resulted in isolation and identification of eleven specialized metabolites, of which four pyridone alkaloid derivatives (1, 2, 4, and 5) and a biphenyl derivative (8) were identified as previously undescribed natural products. Moreover, two dibenzofuran derivatives, isousnic acid and usnic acid (9 and 10) with S absolute configuration were reported for the first time from an endophytic fungus. Additionally, the absolute stereochemistry of the previously described compound 7 was determined. The structure of the compounds isolated was established by means of HR-ESI-MS, 1- and 2D NMR, and ECD calculations, as well as utilizing previously published data. All isolates available in sufficient quantities were evaluated for their antimicrobial activity against a plant pathogen, Botrytis cinerea, and four human pathogens, Aspergillus fumigatus, Aspergillus flavus, Candida albicans, and Cryptococcus neoformans, as well as a human sextually transmitted parasite, Trichomonas vaginalis. Compound 3 displayed antifungal activity only against C. neoformans with an MIC value of 12.5 μg/mL, and compound 6 exhibited promising antifungal activity with MIC values of 0.39–3.25 μg/mL against all the aforementioned fungal pathogens, and a concentration-dependent growth inhibitory property against T. vaginalis. Based on the identification of derivatives, a revised biosynthetic pathway for pyridone-type alkaloids was proposed.
对一种未被描述的百合内生真菌Trochila sp. BGP15P7IS3的水稻培养物进行了生物检测,分离并鉴定了11种特殊代谢物,其中4种吡啶酮生物碱衍生物(1、2、4和5)和1种联苯衍生物(8)被鉴定为先前未被描述的天然产物。此外,首次从内生真菌中分离到S绝对构型的二苯并呋喃衍生物异音酸和音酸(9和10)。此外,测定了上述化合物7的绝对立体化学性质。通过HR-ESI-MS, 1-和2D NMR, ECD计算以及利用先前发表的数据确定了分离化合物的结构。所有获得的足够数量的分离株都被评估了它们对植物病原体灰霉病菌、四种人类病原体烟曲霉、黄曲霉、白色念珠菌和新型隐球菌以及人类性传播寄生虫阴道毛滴虫的抗菌活性。化合物3仅对新生弧菌具有抑制活性,MIC值为12.5 μg/mL;化合物6对上述真菌病原菌均具有抑制活性,MIC值为0.39 ~ 3.25 μg/mL,对阴道T.具有浓度依赖性的生长抑制作用。在衍生物鉴定的基础上,提出了一种改进的吡酮类生物碱生物合成途径。
{"title":"Bioactive specialized metabolites of Trochila sp., an endophytic fungus of Lilium carniolicum","authors":"Mostafa Alilou ,&nbsp;Yun Liu ,&nbsp;Magdalena Steixner ,&nbsp;Isidor Happacher ,&nbsp;Sigrid Beate Abt ,&nbsp;Ursula Fürnkranz ,&nbsp;Fabio Gsaller ,&nbsp;Ursula Peintner ,&nbsp;Hubertus Haas","doi":"10.1016/j.phytochem.2025.114684","DOIUrl":"10.1016/j.phytochem.2025.114684","url":null,"abstract":"<div><div>Bioprospecting of a rice culture of <em>Trochila</em> sp. BGP15P7IS3, an undescribed endophytic fungus from <em>Lilium carniolicum</em>, resulted in isolation and identification of eleven specialized metabolites, of which four pyridone alkaloid derivatives (<strong>1</strong>, <strong>2</strong>, <strong>4,</strong> and <strong>5</strong>) and a biphenyl derivative (<strong>8</strong>) were identified as previously undescribed natural products. Moreover, two dibenzofuran derivatives, isousnic acid and usnic acid (<strong>9</strong> and <strong>10</strong>) with <em>S</em> absolute configuration were reported for the first time from an endophytic fungus. Additionally, the absolute stereochemistry of the previously described compound <strong>7</strong> was determined. The structure of the compounds isolated was established by means of HR-ESI-MS, 1- and 2D NMR, and ECD calculations, as well as utilizing previously published data. All isolates available in sufficient quantities were evaluated for their antimicrobial activity against a plant pathogen, <em>Botrytis cinerea</em>, and four human pathogens, <em>Aspergillus fumigatus</em>, <em>Aspergillus flavus</em>, <em>Candida albicans</em>, and <em>Cryptococcus neoformans</em>, as well as a human sextually transmitted parasite, <em>Trichomonas vaginalis</em>. Compound <strong>3</strong> displayed antifungal activity only against <em>C. neoformans</em> with an MIC value of 12.5 μg/mL, and compound <strong>6</strong> exhibited promising antifungal activity with MIC values of 0.39–3.25 μg/mL against all the aforementioned fungal pathogens, and a concentration-dependent growth inhibitory property against <em>T. vaginalis</em>. Based on the identification of derivatives, a revised biosynthetic pathway for pyridone-type alkaloids was proposed.</div></div>","PeriodicalId":20170,"journal":{"name":"Phytochemistry","volume":"242 ","pages":"Article 114684"},"PeriodicalIF":3.4,"publicationDate":"2025-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145177481","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Highly oxidized germacrane-type sesquiterpenoid dimers from Elephantopus tomentosus L.: Structural characterization, DFT calculation and anti-hepatoma potential 毛毛象高氧化型倍半萜类二聚体:结构表征、DFT计算和抗肝癌潜能
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-24 DOI: 10.1016/j.phytochem.2025.114686
Zi-Hao Ge , Si-Hui Mi , Wen-Long Kou , Guo-Dong Yao , Bin Lin , Jian Wang , Ming Bai , Xiao-Xiao Huang , Shao-Jiang Song
Four previously undescribed highly oxidized germacrane-type sesquiterpenoid dimers were isolated from Elephantopus tomentosus. Their planar structures and absolute configurations were unequivocally elucidated through comprehensive spectroscopic analysis, combined with experimental electronic circular dichroism (ECD) and time-dependent density functional theory (TDDFT) calculations. These dimers, characterized by an O-ether linkage, represent the first reported examples of such derivatives from the genus Elephantopus. The structural validity was verified by performing Hartree-Fock energy calculations within the quantum mechanical (QM) framework. All isolated sesquiterpenoid dimers exhibited moderate inhibitory activity against human hepatocellular carcinoma cell lines (HepG2 and Hep3B). Notably, compound 4 demonstrated the most significant cytotoxicity, with IC50 values of 1.64 μM (HepG2) and 4.85 μM (Hep3B). Furthermore, compound 4 markedly reduced mitochondrial membrane potential (MMP), indicating its role in inducing apoptosis via mitochondrial dysfunction. Network pharmacology and molecular docking further indicated that compound 4 could interact with HSP90AA1 by binding to key amino acid residues, potentially explaining its pharmacological activity.
从毛毛象中分离出四种先前描述过的高度氧化的德曼烷型倍半萜类二聚体。通过综合光谱分析,结合实验电子圆二色性(ECD)和时变密度泛函理论(TDDFT)计算,明确了它们的平面结构和绝对构型。这些二聚体以o -醚键为特征,代表了首次报道的大象属衍生物的例子。在量子力学(QM)框架内进行Hartree-Fock能量计算,验证了结构的有效性。所有分离的倍半萜类二聚体对人肝癌细胞株HepG2和Hep3B均表现出中等抑制活性。其中化合物4的细胞毒性最强,IC50值分别为1.64 μM (HepG2)和4.85 μM (Hep3B)。此外,化合物4显著降低线粒体膜电位(MMP),表明其通过线粒体功能障碍诱导细胞凋亡。网络药理学和分子对接进一步表明,化合物4可能通过结合关键氨基酸残基与HSP90AA1相互作用,可能解释其药理活性。
{"title":"Highly oxidized germacrane-type sesquiterpenoid dimers from Elephantopus tomentosus L.: Structural characterization, DFT calculation and anti-hepatoma potential","authors":"Zi-Hao Ge ,&nbsp;Si-Hui Mi ,&nbsp;Wen-Long Kou ,&nbsp;Guo-Dong Yao ,&nbsp;Bin Lin ,&nbsp;Jian Wang ,&nbsp;Ming Bai ,&nbsp;Xiao-Xiao Huang ,&nbsp;Shao-Jiang Song","doi":"10.1016/j.phytochem.2025.114686","DOIUrl":"10.1016/j.phytochem.2025.114686","url":null,"abstract":"<div><div>Four previously undescribed highly oxidized germacrane-type sesquiterpenoid dimers were isolated from <em>Elephantopus tomentosus</em>. Their planar structures and absolute configurations were unequivocally elucidated through comprehensive spectroscopic analysis, combined with experimental electronic circular dichroism (ECD) and time-dependent density functional theory (TDDFT) calculations. These dimers, characterized by an <em>O</em>-ether linkage, represent the first reported examples of such derivatives from the genus <em>Elephantopus</em>. The structural validity was verified by performing Hartree-Fock energy calculations within the quantum mechanical (QM) framework. All isolated sesquiterpenoid dimers exhibited moderate inhibitory activity against human hepatocellular carcinoma cell lines (HepG2 and Hep3B). Notably, compound <strong>4</strong> demonstrated the most significant cytotoxicity, with IC<sub>50</sub> values of 1.64 μM (HepG2) and 4.85 μM (Hep3B). Furthermore, compound <strong>4</strong> markedly reduced mitochondrial membrane potential (MMP), indicating its role in inducing apoptosis via mitochondrial dysfunction. Network pharmacology and molecular docking further indicated that compound <strong>4</strong> could interact with HSP90AA1 by binding to key amino acid residues, potentially explaining its pharmacological activity.</div></div>","PeriodicalId":20170,"journal":{"name":"Phytochemistry","volume":"241 ","pages":"Article 114686"},"PeriodicalIF":3.4,"publicationDate":"2025-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145158445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Wine-red lignin revisited, dirigent proteins, and native lignin macromolecular configuration 酒红木质素重访,直接蛋白,和天然木质素大分子结构。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-20 DOI: 10.1016/j.phytochem.2025.114683
Dhrubojyoti D. Laskar , Michaël Jourdes , Gregory L. Helms , Qingyan Meng , Nancy A. Somerville , John R. Cort , Laurence B. Davin , Norman G. Lewis
The wine-red coloration of xylem in antisense cinnamyl alcohol dehydrogenase (CAD) down-regulated tobacco (Nicotiana tabacum) has long been reported as due to wine-red colored lignin. To investigate validity of the wine-red lignin report, both wild type (WT) and anti-sense CAD down-regulated tobacco stem xylem tissues were examined, with the red pigment found to be facilely removed by treatment with an 0.5 % HCl in MeOH solution at 4 °C. The red pigment in the xylem tissues was rapidly reconstituted in both pre-treated antisense CAD and WT xylem tissues by incubation with sinapyl aldehyde in MeOH solution, and then facilely removed by subsequent 0.5 % HCl in MeOH treatment. Only sinapyl aldehyde was demonstrated as contributing to the red pigmentation, this being consistent with its anionic quinone methide canonical form. No evidence was obtained for a wine-red lignin. Additionally, lignin-derived isolates from both antisense CAD and WT lines essentially differed only in presence of small amounts (ca. 1.41 %) of 8–O–4′ linked sinapyl aldehyde end groups and a slightly smaller molecular weight distribution (MWD) of the lignin from the antisense CAD line. No evidence was obtained that poly-hydroxycinnamyl aldehydes contributed to bulk lignification; the slightly lower MWD may result from hydroxycinnamyl aldehydes functioning as terminators of polymerization during lignification. More importantly, these findings are placed in context of what is now known about 1) lignin macromolecular assembly proper in planta, 2) dirigent protein functions, 3D structures, and active sites as entry points to distinct plant phenol metabolic classes, including lignins, 3) AlphaFold2 modeling of Dir-e subfamily proteins involved in lignification, and 4) what urgently remains to be done in the study of lignification.
反义肉桂醇(CAD)下调烟草(Nicotiana tabacum)木质部的酒红色一直被报道是由于酒红色木质素。为了验证酒红色木质素报告的有效性,对野生型(WT)和反义CAD下调的烟草茎木质部组织进行了检测,发现在4°C的MeOH溶液中用0.5% HCl处理可以很容易地去除红色木质素。经过预处理的反义CAD木质部组织和WT木质部组织中,红色素在甲醇溶液中与sinapyl醛孵育后迅速重建,随后用0.5% HCl在甲醇溶液中迅速去除。只有sinapyl醛被证明有助于红色色素沉着,这是一致的阴离子醌的典型形式。没有证据表明存在酒红色木质素。此外,来自反义CAD系和WT系的木质素来源分离物本质上仅存在少量(约1.41%)的8-O-4'连接的sinapyl醛端基,并且来自反义CAD系的木质素分子量分布略小。没有证据表明聚羟基肉桂酰醛有助于散装木质化;稍低的分子量分布(MWD)可能是由于羟基肉桂基醛在木质素化过程中起聚合终止剂的作用。更重要的是,这些发现是在以下方面的背景下进行的:1)植物中木质素大分子组装;2)直接蛋白功能、3D结构和活性位点作为不同植物酚代谢类(包括木质素)的入口点;3)参与木质素的Dir-e亚家族蛋白的AlphaFold2建模;4)木质素研究中迫切需要做的工作。
{"title":"Wine-red lignin revisited, dirigent proteins, and native lignin macromolecular configuration","authors":"Dhrubojyoti D. Laskar ,&nbsp;Michaël Jourdes ,&nbsp;Gregory L. Helms ,&nbsp;Qingyan Meng ,&nbsp;Nancy A. Somerville ,&nbsp;John R. Cort ,&nbsp;Laurence B. Davin ,&nbsp;Norman G. Lewis","doi":"10.1016/j.phytochem.2025.114683","DOIUrl":"10.1016/j.phytochem.2025.114683","url":null,"abstract":"<div><div>The wine-red coloration of xylem in antisense cinnamyl alcohol dehydrogenase (CAD) down-regulated tobacco (<em>Nicotiana tabacum</em>) has long been reported as due to wine-red colored lignin. To investigate validity of the wine-red lignin report, both wild type (WT) and anti-sense CAD down-regulated tobacco stem xylem tissues were examined, with the red pigment found to be facilely removed by treatment with an 0.5 % HCl in MeOH solution at 4 °C. The red pigment in the xylem tissues was rapidly reconstituted in both pre-treated antisense CAD and WT xylem tissues by incubation with sinapyl aldehyde in MeOH solution, and then facilely removed by subsequent 0.5 % HCl in MeOH treatment. Only sinapyl aldehyde was demonstrated as contributing to the red pigmentation, this being consistent with its anionic quinone methide canonical form. No evidence was obtained for a wine-red lignin. Additionally, lignin-derived isolates from both antisense CAD and WT lines essentially differed only in presence of small amounts (<em>ca.</em> 1.41 %) of 8–<em>O</em>–4′ linked sinapyl aldehyde end groups and a slightly smaller molecular weight distribution (MWD) of the lignin from the antisense CAD line. No evidence was obtained that poly-hydroxycinnamyl aldehydes contributed to bulk lignification; the slightly lower MWD may result from hydroxycinnamyl aldehydes functioning as terminators of polymerization during lignification. More importantly, these findings are placed in context of what is now known about 1) lignin macromolecular assembly proper <em>in planta</em>, 2) dirigent protein functions, 3D structures, and active sites as entry points to distinct plant phenol metabolic classes, including lignins, 3) AlphaFold2 modeling of Dir-e subfamily proteins involved in lignification, and 4) what urgently remains to be done in the study of lignification.</div></div>","PeriodicalId":20170,"journal":{"name":"Phytochemistry","volume":"242 ","pages":"Article 114683"},"PeriodicalIF":3.4,"publicationDate":"2025-09-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145113907","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Clavatol derivatives from the endophytic fungus Penicillium commune XL-0473 Clavatol源自内生真菌青霉菌公社XL-0473。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-16 DOI: 10.1016/j.phytochem.2025.114679
Liangxiu Liao , Tao Zhu , Shan Ran , Yizhou Bian , Ming Yao , Qingpei Liu , Wenjing Wang , Xiaolong Yang
Thirteen previously undescribed clavatol derivatives (1, 2, 3a, 3b, and 412), along with thirteen known compounds were isolated from the endophytic fungus Penicillium commune XL-0473. Their structures were established through comprehensive spectroscopic analyses, quantum chemical electronic circular dichroism calculations, single-crystal X-ray diffraction, and chemical synthesis experiment. Notably, compounds 1 and 2 represent the first reported clavatol dimers conjugated with amino acids. Compounds 811 are unprecedented derivatives containing a 1,6-dioxaspiro[4.4]nonane framework. Compound 16 demonstrated potent antibacterial activity against multidrug-resistant pathogens, with MIC values ranging from 3.13 to 6.25 μg/mL. A plausible nonenzymatic self-assembly mechanism involving ortho-quinone methide intermediates was proposed to explain their biosynthesis pathway.
从内生真菌青霉菌公社XL-0473中分离出13个先前未被描述的克拉瓦托醇衍生物(1、2、3a、3b和4-12)以及13个已知化合物。通过综合光谱分析、量子化学电子圆二色性计算、单晶x射线衍射和化学合成实验确定了它们的结构。值得注意的是,化合物1和2是首次报道的与氨基酸偶联的克拉瓦醇二聚体。化合物8-11是前所未有的含有1,6-二恶螺[4.4]壬烷骨架的衍生物。化合物16对多重耐药病原菌具有较强的抗菌活性,其MIC值为3.13 ~ 6.25 μg/mL。提出了一种涉及对醌类中间体的非酶自组装机制来解释其生物合成途径。
{"title":"Clavatol derivatives from the endophytic fungus Penicillium commune XL-0473","authors":"Liangxiu Liao ,&nbsp;Tao Zhu ,&nbsp;Shan Ran ,&nbsp;Yizhou Bian ,&nbsp;Ming Yao ,&nbsp;Qingpei Liu ,&nbsp;Wenjing Wang ,&nbsp;Xiaolong Yang","doi":"10.1016/j.phytochem.2025.114679","DOIUrl":"10.1016/j.phytochem.2025.114679","url":null,"abstract":"<div><div>Thirteen previously undescribed clavatol derivatives (<strong>1</strong>, <strong>2</strong>, <strong>3a</strong>, <strong>3b</strong>, and <strong>4</strong>−<strong>12)</strong>, along with thirteen known compounds were isolated from the endophytic fungus <em>Penicillium commune</em> XL-0473. Their structures were established through comprehensive spectroscopic analyses, quantum chemical electronic circular dichroism calculations, single-crystal X-ray diffraction, and chemical synthesis experiment. Notably, compounds <strong>1</strong> and <strong>2</strong> represent the first reported clavatol dimers conjugated with amino acids. Compounds <strong>8</strong>–<strong>11</strong> are unprecedented derivatives containing a 1,6-dioxaspiro[4.4]nonane framework. Compound <strong>16</strong> demonstrated potent antibacterial activity against multidrug-resistant pathogens, with MIC values ranging from 3.13 to 6.25 μg/mL. A plausible nonenzymatic self-assembly mechanism involving <em>ortho</em>-quinone methide intermediates was proposed to explain their biosynthesis pathway.</div></div>","PeriodicalId":20170,"journal":{"name":"Phytochemistry","volume":"241 ","pages":"Article 114679"},"PeriodicalIF":3.4,"publicationDate":"2025-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145086781","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Eleven previously undescribed sesquiterpenoids with anti-inflammatory activity isolated from the cultures of basidiomycete Marasmiellus candidus 11个先前描述的具有抗炎活性的倍半萜类化合物从担子菌中分离出来。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-16 DOI: 10.1016/j.phytochem.2025.114678
Lan Yao , Shiyu Li , Jinxiu Zhang , Zhuang Li , Jianhua Lv
In this study, eleven undescribed sesquiterpenoids, named marasmiellolides A−K (111), were isolated from the rice-fermented mycelia of the basidiomycete Marasmiellus candidus. Their structures were established through extensive spectroscopic analyses including HR-ESI-MS, 1D and 2D NMR. The absolute configurations of compounds 1−3 and 5−8 were assigned based on the comparison of the experimental and calculated ECD data. In addition, compounds 111 were tested for anti-inflammatory activity against lipopolysaccharide (LPS)-induced nitric oxide (NO) production in RAW264.7 macrophages. Compounds 13 exhibited significant anti-inflammatory activity with IC50 values ranging from 7.2 to 13.2 μM.
本研究从担子菌白僵菌的大米发酵菌丝中分离得到11个未被描述的倍半萜类化合物,命名为马拉斯米ellolides A-K(1-11)。通过广泛的光谱分析,包括HR-ESI-MS, 1D和2D NMR,确定了它们的结构。化合物1-3和5-8的绝对构型是通过对比实验和计算ECD得到的。此外,我们还测试了化合物1-11对脂多糖(LPS)诱导的RAW264.7巨噬细胞一氧化氮(NO)产生的抗炎活性。化合物1 ~ 3具有显著的抗炎活性,IC50值在7.2 ~ 13.2 μM之间。
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引用次数: 0
Nor-halimane and spiro-labdane diterpenoids with anti-inflammatory activity from Leucas ciliata Benth 毛缕木中具有抗炎活性的非halimane和spirolabdane二萜。
IF 3.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-09-16 DOI: 10.1016/j.phytochem.2025.114681
Jia-Cai Kuang , Fu-Ling Cen , Xuan Zhang , Xu-Hua Nong , Xue-Ming Zhou , Xiao-Bao Li , Zhang-Xin Yu , Guang-Ying Chen
Eleven previously undescribed diterpenoids, cilileucapenoids A–K (110 and 12), comprising two halimane diterpenoids (1 and 12) and nine spiro-labdane diterpenoids (210), along with one known analogue (11), were isolated from the whole plant of Leucas ciliata. The structures and absolute configurations were determined through the analysis of their HR-ESI-MS, 1D/2D NMR, electronic circular dichroism (ECD) calculations, Mosher's esterification, and single-crystal X-ray diffraction. Notably, 1 represents the first reported aromatic halimane diterpenoid, while 2 features as a rare dispiro-tetrahydrofuran-labdane skeleton. Compounds 310 uniformly incorporate a spiro-tetrahydrofuran moiety. In bioactivity assessments, compounds 1, 3, 4, and 7 demonstrated significant anti-inflammatory effects by inhibiting nitric oxide (NO) production in LPS-stimulated RAW264.7 macrophages, with IC50 values ranging from 9.13 to 25.94 μM. Structure-activity relationship (SAR) analysis further established that the Z-configuration of these diterpenoids confers markedly enhanced anti-inflammatory efficacy relative to the E-configuration.
11个先前未被描述的二萜,cilileucapenoids A-K(1-10和12),包括2个halimane二萜(1和12)和9个spirorolabdane二萜(2-10),以及一个已知的类似物(11),从Leucas ciliata整个植物中分离出来。通过HR-ESI-MS, 1D/2D NMR,电子圆二色性(ECD)计算,Mosher酯化反应和单晶x射线衍射分析确定了它们的结构和绝对构型。值得注意的是,1是首次报道的芳香卤烷二萜,而2是罕见的双螺-四氢呋喃-labdane骨架。化合物3-10均匀地加入螺-四氢呋喃部分。在生物活性评估中,化合物1、3、4和7通过抑制lps刺激的RAW264.7巨噬细胞一氧化氮(NO)的产生而表现出显著的抗炎作用,IC50值在9.13 ~ 25.94 μM之间。构效关系(SAR)分析进一步证实,相对于e构型,这些二萜类化合物的z构型具有明显增强的抗炎作用。
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Phytochemistry
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