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Structural comparison of unconventional G protein YchF with heterotrimeric G protein and small G protein. 非常规G蛋白YchF与异三聚体G蛋白和小G蛋白的结构比较。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 Epub Date: 2022-02-08 DOI: 10.1080/15592324.2021.2024405
Maozhen Luo, Zhiwei Han, Guoye Huang, Rongfang Li, Yi Liu, Junjie Lu, Lin Liu, Rui Miao

Guanine nucleotide-binding (G) proteins, namely, phosphate-binding (P) loop GTPases, play a critical role in life processes among different species. Based on the structural characteristics, G proteins can be divided into heterotrimeric G proteins, small G proteins and multiple unique unconventional G proteins. The highly conserved unconventional G protein YchF is composed of a core G domain, an inserted coiled-coil domain, and a TGS domain from the N-terminus to the C-terminus. In this review, we compared the structural characteristics of the G domain in rice OsYchF1 with those of Rattus norvegicus heterotrimeric G protein α-subunit and human small G protein Ras-related G protein C and analyzed the binding modes of these G proteins with GTP or ATP by performing molecular dynamics simulations. In summary, it will provide new insights into the enormous diversity of biological function of G proteins.

鸟嘌呤核苷酸结合(G)蛋白,即磷酸结合(P)环gtp酶,在不同物种的生命过程中起着关键作用。根据结构特征,G蛋白可分为异源三聚体G蛋白、小G蛋白和多种独特的非常规G蛋白。高度保守的非常规G蛋白YchF由核心G结构域、插入的螺旋结构域和从n端到c端的TGS结构域组成。本文比较了水稻OsYchF1中G结构域与褐家鼠异三聚体G蛋白α-亚基和人小G蛋白ras相关的G蛋白C的结构特征,并通过分子动力学模拟分析了这些G蛋白与GTP或ATP的结合模式。总之,它将为G蛋白的巨大多样性的生物学功能提供新的见解。
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引用次数: 2
Functional characterization of C-TERMINALLY ENCODED PEPTIDE (CEP) family in Brassica rapa L. 油菜c端编码肽(CEP)家族的功能表征。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 Epub Date: 2021-12-30 DOI: 10.1080/15592324.2021.2021365
Ziwen Qiu, Keqing Zhuang, Yiting Liu, Xiaomin Ge, Chen Chen, Songping Hu, Huibin Han

The small regulatory C-TERMINALLY ENCODED PEPTIDE (CEP) peptide family plays crucial roles in plant growth and stress response. However, little is known about this peptide family in Brassica species. Here, we performed a systematic analysis to identify the putative Brassica rapa L. CEP (BrCEP) gene family. In total, 27 BrCEP genes were identified and they were classified into four subgroups based on the CEP motifs similarity. BrCEP genes displayed distinct expression patterns in response to both developmental and several environmental signals, suggesting their broad roles during Brassica rapa development. Furthuremore, the synthetic BrCEP3 peptide accelerated Brassica rapa primary root growth in a hydrogen peroxide (H2O2) and Ca2+ dependent manner. In summary, our work will provide fundamental insights into the physiological function of CEP peptides during Brassica rapa development.

c末端编码小肽(CEP)家族在植物生长和逆境响应中起着至关重要的作用。然而,对芸苔属植物的这一肽家族知之甚少。本文对油菜CEP (BrCEP)基因家族进行了系统分析。共鉴定出27个BrCEP基因,并根据CEP基序相似性将其分为4个亚群。BrCEP基因对发育信号和多种环境信号的响应表现出不同的表达模式,表明它们在油菜发育过程中发挥着广泛的作用。此外,合成的BrCEP3肽以过氧化氢(H2O2)和Ca2+依赖的方式加速了油菜初生根的生长。综上所述,我们的工作将为油菜发育过程中CEP肽的生理功能提供基础见解。
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引用次数: 1
Exogenous brassinosteroids promotes root growth, enhances stress tolerance, and increases yield in maize. 外源油菜素内酯促进玉米根系生长,增强抗逆性,提高产量。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2095139
Hao Zhang, Dan Zhao, Ziyan Tang, Ying Zhang, Ke Zhang, Jingao Dong, Fengru Wang

Brassinosteroids (BRs) regulate of maize (Zea mays L.) growth, but the underlying molecular mechanism remains unclear. In this study, we used a multi-disciplinary approach to determine how BRs regulate maize morphology and physiology during development. Treatment with the BRs promoted primary root the elongation and growth during germination, and the early development of lateral roots. BRs treatment during the middle growth stage increased the levels of various stress resistance factors, and enhanced resistance to lodging, likely by protecting the plant against stem rot and sheath rot. BRs had no significant effect on plant height during late growth, but it increased leaf angle and photosynthetic efficiency, as well as yield and quality traits. Our findings increase our understanding of the regulatory effects of BR on maize root growth and development and the mechanism by which BR improves disease resistance, which could further the potential for using BR to improve maize yield.

油菜素内酯(BRs)调节玉米(Zea mays L.)的生长,但其潜在的分子机制尚不清楚。在这项研究中,我们采用多学科方法来确定BRs如何调节玉米发育过程中的形态和生理。BRs处理促进了萌发期初生根的伸长和生长,促进了侧根的早期发育。在生育中期施用BRs提高了植株的各种抗逆性因子水平,并增强了抗倒伏能力,这可能是通过保护植株免受茎腐和鞘腐的影响。BRs对生育后期的株高没有显著影响,但增加了叶片角和光合效率,以及产量和品质性状。研究结果进一步揭示了BR对玉米根系生长发育的调控作用以及BR提高抗病性的机制,为利用BR提高玉米产量提供了新的思路。
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引用次数: 3
Molecular mechanisms of Piriformospora indica mediated growth promotion in plants. 梨形孢子菌促进植物生长的分子机制。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2096785
Anish Kundu, Jyothilakshmi Vadassery

Piriformospora indica is a root endophyte having a vast host range in plants. Plant growth promotion is a hallmark of the symbiotic interaction of P. indica with its hosts. As a plant growth-promoting microorganism, it is important to know the mechanisms involved in growth induction. Hitherto, multiple reports have demonstrated various molecular mechanisms of P. indica-mediated growth promotion, including protein kinase-mediated pathway, enhanced nutrient uptake and polyamine-mediated growth phytohormone elevation. Here, we briefly present a discussion on the state-of-the-art molecular mechanisms of P. indica-mediated growth promotion in host plants, in order to obtain a future prospect on utilization of this microorganism for sustainable agriculture.

Piriformospora indica是一种在植物中具有广泛寄主范围的根内生菌。促进植物生长是籼稻与寄主共生相互作用的一个标志。作为促进植物生长的微生物,了解其生长诱导机制具有重要意义。迄今为止,已有多篇报道证明了P. indica介导的促进生长的多种分子机制,包括蛋白激酶介导的途径、增强营养摄取和多胺介导的生长激素升高。在此,我们简要介绍了单孢霉在寄主植物中促进生长的最新分子机制,以期对该微生物在可持续农业中的应用前景进行展望。
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引用次数: 7
BTB and TAZ domain protein BT4 positively regulates the resistance to Botrytis cinerea in Arabidopsis. BTB和TAZ结构域蛋白BT4正调控拟南芥对灰霉病的抗性。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2104003
Fan Zhou, Kang Zhang, Xu Zheng, Guanyu Wang, Hongzhe Cao, Jihong Xing, Jingao Dong

BT4 gene was identified to play an important role in Arabidopsis resistance to pst DC3000 in preliminary studies. However, the specific function and molecular mechanism of BT4 gene in regulation of Arabidopsis resistance to Botrytis cinerea had not been described to date. In this study, we found that the expression of BT4 was induced by wounding and B. cinerea inoculation in Arabidopsis. After inoculated with B. cinerea, T-DNA insertion mutants of the BT4 gene, bt4, showed significant susceptibility symptoms, whereas no significant symptoms were found in wild-type (WT), the complemented transgenic plants (CE), and the overexpression transgenic plants (OE). After inoculated with B. cinerea, the expression levels of JAR1 and PDF1.2 genes in bt4 mutant were induced; however, the expression levels of these genes in bt4 mutant were significantly lower than those in the WT, CE, and OE. These results indicated that the BT4 positively regulate the expression of genes in JA/ET signaling pathways. Therefore, the BT4 may be involved in the regulation of JA/ET signaling pathways to affect Arabidopsis resistance to B. cinerea.

初步研究发现BT4基因在拟南芥对pst DC3000的抗性中起重要作用。然而,BT4基因调控拟南芥对灰霉病抗性的具体功能和分子机制尚未见报道。在本研究中,我们发现在拟南芥中,BT4的表达受到损伤和接种灰孢杆菌的诱导。接种灰孢杆菌后,BT4基因的T-DNA插入突变体BT4表现出明显的易感症状,而野生型(WT)、转基因植株(CE)和过表达转基因植株(OE)均未发现明显的易感症状。接种灰葡萄球菌后,诱导bt4突变体中JAR1和PDF1.2基因的表达水平;然而,这些基因在bt4突变体中的表达水平明显低于WT、CE和OE。这些结果表明,BT4正调控JA/ET信号通路中基因的表达。因此,BT4可能参与调控JA/ET信号通路,影响拟南芥对灰孢杆菌的抗性。
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引用次数: 0
Transcriptome-wide identification of WRKY transcription factors and their expression profiles in response to methyl jasmonate in Platycodon grandiflorus. 桔梗WRKY转录因子的全转录组鉴定及其对茉莉酸甲酯的表达谱。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2089473
Jing Li, Hanwen Yu, Mengli Liu, Bowen Chen, Nan Dong, Xiangwei Chang, Jutao Wang, Shihai Xing, Huasheng Peng, Liangping Zha, Shuangying Gui

Platycodon grandiflorus, a perennial flowering plant widely distributed in China and South Korea, is an excellent resource for both food and medicine. The main active compounds of P. grandiflorus are triterpenoid saponins. WRKY transcription factors (TFs) are among the largest gene families in plants and play an important role in regulating plant terpenoid accumulation, physiological metabolism, and stress response. Numerous studies have been reported on other medicinal plants; however, little is known about WRKY genes in P. grandiflorus. In this study, 27 PgWRKYs were identified in the P. grandiflorus transcriptome. Phylogenetic analysis showed that PgWRKY genes were clustered into three main groups and five subgroups. Transcriptome analysis showed that the PgWRKY gene expression patterns in different tissues differed between those in Tongcheng City (Southern Anhui) and Taihe County (Northern Anhui). Gene expression analysis based on RNA sequencing and qRT-PCR analysis showed that most PgWRKY genes were expressed after induction with methyl jasmonate (MeJA). Co-expressing PgWRKY genes with triterpenoid biosynthesis pathway genes revealed four PgWRKY genes that may have functions in triterpenoid biosynthesis. Additionally, functional annotation and protein-protein interaction analysis of PgWRKY proteins were performed to predict their roles in potential regulatory networks. Thus, we systematically analyzed the structure, evolution, and expression patterns of PgWRKY genes to provide an important theoretical basis for further exploring the molecular basis and regulatory mechanism of WRKY TFs in triterpenoid biosynthesis.

桔梗(Platycodon grandflorus)是一种多年生开花植物,广泛分布在中国和韩国,是一种极好的食品和药用资源。桔梗的主要活性成分为三萜皂苷。WRKY转录因子(WRKY transcription factors, TFs)是植物中最大的基因家族之一,在调控植物萜类物质积累、生理代谢和逆境反应等方面发挥着重要作用。对其他药用植物的大量研究已被报道;然而,对桔梗中WRKY基因的了解甚少。在本研究中,在桔梗的转录组中鉴定了27个PgWRKYs。系统发育分析表明,PgWRKY基因可聚为3个主群和5个亚群。转录组分析显示,皖南桐城市和皖北太和县不同组织中PgWRKY基因的表达模式存在差异。基于RNA测序和qRT-PCR分析的基因表达分析显示,大部分PgWRKY基因在茉莉酸甲酯(MeJA)诱导后表达。PgWRKY基因与三萜生物合成途径基因共表达,揭示了四个可能在三萜生物合成中起作用的PgWRKY基因。此外,还对PgWRKY蛋白进行了功能注释和蛋白-蛋白相互作用分析,以预测其在潜在调控网络中的作用。因此,我们系统地分析了PgWRKY基因的结构、进化和表达模式,为进一步探索WRKY TFs在三萜生物合成中的分子基础和调控机制提供了重要的理论依据。
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引用次数: 6
Effects of indirect plant-plant interaction via root exudate on growth and leaf chemical contents in Rumex obtusifolius. 植物与植物间通过根系分泌物间接相互作用对黑叶梅生长和叶片化学物质含量的影响。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2050628
Haruna Ohsaki, Akira Yamawo

Belowground plant-plant interactions can affect the concentrations of leaf chemicals, but the mechanism is not clear. Here, we investigated the effects of intra- and interspecific root exudates on the growth and leaf chemical content of Rumex obtusifolius. Seedlings of R. obtusifolius were grown with exposure to root exudates collected from other R. obtusifolius plants or from Trifolium repens, Festuca ovina, or Plantago asiatica plants, and the total phenolic, condensed tannin, dry biomass, and chlorophyll contents of the leaves were examined. The root exudates from conspecific plants had no effect on the total phenolic, condensed tannin, and chlorophyll contents of the leaves but did significantly reduce the dry leaf biomass. Root exudates from heterospecific plants had different effects depending on the species. These results were different from the results of a previous study that examined the effects of direct plant-plant interaction in R. obtusifolius. Thus, indirect interaction via root exudates induces different effects in leaves from direct interaction.

地下植物与植物之间的相互作用可以影响叶片化学物质的浓度,但其机制尚不清楚。本研究研究了种内和种间根分泌物对弯叶鲁墨生长和叶片化学物质含量的影响。将黑叶参幼苗与其他黑叶参植物、三叶草、羊茅和车前草的根系分泌物相接触,测定其叶片的总酚、浓缩单宁、干生物量和叶绿素含量。同生植物根系分泌物对叶片总酚、缩合单宁和叶绿素含量没有影响,但显著降低了干叶生物量。异种植物根系分泌物的影响因种而异。这些结果不同于先前的研究结果,研究了植物与植物之间直接相互作用对钝叶黄的影响。因此,通过根系分泌物的间接相互作用对叶片的影响不同于直接相互作用。
{"title":"Effects of indirect plant-plant interaction via root exudate on growth and leaf chemical contents in <i>Rumex obtusifolius</i>.","authors":"Haruna Ohsaki,&nbsp;Akira Yamawo","doi":"10.1080/15592324.2022.2050628","DOIUrl":"https://doi.org/10.1080/15592324.2022.2050628","url":null,"abstract":"<p><p>Belowground plant-plant interactions can affect the concentrations of leaf chemicals, but the mechanism is not clear. Here, we investigated the effects of intra- and interspecific root exudates on the growth and leaf chemical content of <i>Rumex obtusifolius</i>. Seedlings of <i>R. obtusifolius</i> were grown with exposure to root exudates collected from other <i>R. obtusifolius</i> plants or from <i>Trifolium repens, Festuca ovina</i>, or <i>Plantago asiatica</i> plants, and the total phenolic, condensed tannin, dry biomass, and chlorophyll contents of the leaves were examined. The root exudates from conspecific plants had no effect on the total phenolic, condensed tannin, and chlorophyll contents of the leaves but did significantly reduce the dry leaf biomass. Root exudates from heterospecific plants had different effects depending on the species. These results were different from the results of a previous study that examined the effects of direct plant-plant interaction in <i>R. obtusifolius</i>. Thus, indirect interaction via root exudates induces different effects in leaves from direct interaction.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959531/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40315797","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Moss PIEZO homologs have a conserved structure, are ubiquitously expressed, and do not affect general vacuole function. 苔藓 PIEZO 同源物具有保守的结构,普遍表达,并且不影响一般液泡功能。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 Epub Date: 2021-12-24 DOI: 10.1080/15592324.2021.2015893
Ivan Radin, Ryan A Richardson, Elizabeth S Haswell

The PIEZO protein family was first described in animals where these mechanosensitive calcium channels perform numerous essential functions, including the perception of light touch, shear, and compressive forces. PIEZO homologs are present in most eukaryotic lineages and recently we reported that two PIEZO homologs from moss Physcomitrium patens localize to the vacuolar membrane and modulate its morphology in tip-growing caulonemal cells. Here we show that predicted structures of both PpPIEZO1 and PpPIEZO2 are very similar to that of mouse Piezo2. Furthermore, we show that both moss PIEZO genes are ubiquitously expressed in moss vegetative tissues and that they are not required for normal vacuolar pH or intracellular osmotic potential. These results suggest that moss PIEZO proteins are widely expressed mechanosensory calcium channels that serve a signaling rather than maintenance role in vacuoles.

PIEZO 蛋白家族最早是在动物体内被描述的,这些机械敏感性钙通道具有许多基本功能,包括感知轻触力、剪切力和压缩力。PIEZO 同源物存在于大多数真核生物系中,最近我们报道了来自藓类 Physcomitrium patens 的两个 PIEZO 同源物定位在液泡膜上,并在顶端生长的茎基细胞中调节其形态。在这里,我们发现 PpPIEZO1 和 PpPIEZO2 的预测结构与小鼠 Piezo2 非常相似。此外,我们还发现这两个苔藓 PIEZO 基因在苔藓无性繁殖组织中普遍表达,而且它们不是正常液泡 pH 值或细胞内渗透势所必需的。这些结果表明,苔藓 PIEZO 蛋白是一种广泛表达的机械感觉钙通道,在液泡中起着信号传递而非维持的作用。
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引用次数: 0
Exogenous spermidine enhances the photosynthetic and antioxidant capacity of citrus seedlings under high temperature. 外源精胺可提高柑橘幼苗在高温条件下的光合作用和抗氧化能力
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2086372
Xu Chao, Tang Yuqing, Liu Xincheng, Yang Huidong, Wang Yuting, Hu Zhongdong, Hu Xinlong, Liu Buchun, Su Jing

Studies have not fully explained the underlying mechanism of spermidine-mediated heat tolerance. This study investigated the possible role of spermidine (Spd) in regulating citrus heat tolerance. The results showed that exogenous Spd effectively alleviated the limitation of high temperature (HT) on photosynthesis. Exogenous Spd increased the chlorophyll content, net photosynthetic rate, intercellular carbon dioxide concentration, stomatal conductance, maximum and effective quantum yield of PSII photochemistry, nonphotochemical quenching coefficient, and electron transport rate in citrus seedlings under HT stress, but declined the stomatal limitation value. In addition, Spd treatment promoted the dynamic balance of the citrus enzymatic and non-enzymatic antioxidants system. Spd application significantly increased the activity of superoxide dismutase, peroxidase, catalase, ascorbic acid, and glutathione and the expression level of corresponding genes at high temperature, while reducing the content of H2O2 and malondialdehyde. Therefore, our findings suggested exogenous Spd significantly ameliorated citrus physiological and photosynthetic adaptation under HT stress, thereby providing helpful guidance for citrus cultivation in HT events.

有关研究尚未完全解释精胺介导耐热性的内在机制。本研究探讨了亚精胺(Spd)在调节柑橘耐热性中可能发挥的作用。结果表明,外源 Spd 能有效缓解高温(HT)对光合作用的限制。外源Spd提高了高温胁迫下柑橘幼苗的叶绿素含量、净光合速率、细胞间二氧化碳浓度、气孔导度、PSII光化学最大量子产率和有效量子产率、非光化学淬灭系数和电子传递速率,但降低了气孔限制值。此外,Spd 处理促进了柑橘酶和非酶抗氧化剂系统的动态平衡。施用 Spd 能明显提高高温下超氧化物歧化酶、过氧化物酶、过氧化氢酶、抗坏血酸和谷胱甘肽的活性以及相应基因的表达水平,同时降低 H2O2 和丙二醛的含量。因此,我们的研究结果表明,外源Spd能显著改善柑橘在高温胁迫下的生理和光合适应性,从而为柑橘在高温条件下的栽培提供有益的指导。
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引用次数: 0
Gravity induces asymmetric Ca2+ spikes in the root cap in the early stage of gravitropism. 重力诱导根帽在重力生长早期出现不对称的 Ca2+ 尖峰。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 Epub Date: 2022-01-13 DOI: 10.1080/15592324.2021.2025325
Ruoxin Zhao, Zonghao Liu, Ziwei Li, Shi Xu, Xianyong Sheng

Gravitropism is an important strategy for the adaptation of plants to the changing environment. Previous reports indicated that Ca2+ participated in plant gravity response. However, present information on the functions of Ca2+ in plant gravitropism was obtained mainly on coleoptiles, hypocotyls, and petioles, little is known about the dynamic changes of Ca2+ during root gravitropism. In the present study, the transgenic Arabidopsis thaliana R-GECO1 was placed horizontally and subsequently vertically on a refitted Leica SP8 laser scanning confocal microscopy with a vertical stage. Real-time observations indicated that gravistimulation induced not only an increase in the Ca2+ concentration, but also an accelerated occurrence of Ca2+ sparks in the root cap, especially in the lower side of the lateral root cap, indicating a strong tie between Ca2+ dynamics and gravistimulation during the early stage of root gravity response.

引力是植物适应不断变化的环境的重要策略。之前的报道表明,Ca2+参与了植物重力反应。然而,目前有关 Ca2+ 在植物重力作用中的功能的信息主要是在叶柄、下胚轴和叶柄上获得的,对根系重力作用过程中 Ca2+ 的动态变化知之甚少。在本研究中,将转基因拟南芥 R-GECO1 水平放置,然后垂直放置在带垂直平台的改装 Leica SP8 激光扫描共聚焦显微镜上。实时观察结果表明,重力刺激不仅会引起 Ca2+ 浓度的增加,还会加速根帽中 Ca2+ 火花的出现,尤其是在侧根帽的下侧,这表明在根系重力反应的早期阶段,Ca2+ 动态与重力刺激之间存在密切联系。
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引用次数: 0
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Plant Signaling & Behavior
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