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Functional characterization of C-TERMINALLY ENCODED PEPTIDE (CEP) family in Brassica rapa L. 油菜c端编码肽(CEP)家族的功能表征。
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 Epub Date: 2021-12-30 DOI: 10.1080/15592324.2021.2021365
Ziwen Qiu, Keqing Zhuang, Yiting Liu, Xiaomin Ge, Chen Chen, Songping Hu, Huibin Han

The small regulatory C-TERMINALLY ENCODED PEPTIDE (CEP) peptide family plays crucial roles in plant growth and stress response. However, little is known about this peptide family in Brassica species. Here, we performed a systematic analysis to identify the putative Brassica rapa L. CEP (BrCEP) gene family. In total, 27 BrCEP genes were identified and they were classified into four subgroups based on the CEP motifs similarity. BrCEP genes displayed distinct expression patterns in response to both developmental and several environmental signals, suggesting their broad roles during Brassica rapa development. Furthuremore, the synthetic BrCEP3 peptide accelerated Brassica rapa primary root growth in a hydrogen peroxide (H2O2) and Ca2+ dependent manner. In summary, our work will provide fundamental insights into the physiological function of CEP peptides during Brassica rapa development.

c末端编码小肽(CEP)家族在植物生长和逆境响应中起着至关重要的作用。然而,对芸苔属植物的这一肽家族知之甚少。本文对油菜CEP (BrCEP)基因家族进行了系统分析。共鉴定出27个BrCEP基因,并根据CEP基序相似性将其分为4个亚群。BrCEP基因对发育信号和多种环境信号的响应表现出不同的表达模式,表明它们在油菜发育过程中发挥着广泛的作用。此外,合成的BrCEP3肽以过氧化氢(H2O2)和Ca2+依赖的方式加速了油菜初生根的生长。综上所述,我们的工作将为油菜发育过程中CEP肽的生理功能提供基础见解。
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引用次数: 1
Transcriptome-wide identification of WRKY transcription factors and their expression profiles in response to methyl jasmonate in Platycodon grandiflorus. 桔梗WRKY转录因子的全转录组鉴定及其对茉莉酸甲酯的表达谱。
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2089473
Jing Li, Hanwen Yu, Mengli Liu, Bowen Chen, Nan Dong, Xiangwei Chang, Jutao Wang, Shihai Xing, Huasheng Peng, Liangping Zha, Shuangying Gui

Platycodon grandiflorus, a perennial flowering plant widely distributed in China and South Korea, is an excellent resource for both food and medicine. The main active compounds of P. grandiflorus are triterpenoid saponins. WRKY transcription factors (TFs) are among the largest gene families in plants and play an important role in regulating plant terpenoid accumulation, physiological metabolism, and stress response. Numerous studies have been reported on other medicinal plants; however, little is known about WRKY genes in P. grandiflorus. In this study, 27 PgWRKYs were identified in the P. grandiflorus transcriptome. Phylogenetic analysis showed that PgWRKY genes were clustered into three main groups and five subgroups. Transcriptome analysis showed that the PgWRKY gene expression patterns in different tissues differed between those in Tongcheng City (Southern Anhui) and Taihe County (Northern Anhui). Gene expression analysis based on RNA sequencing and qRT-PCR analysis showed that most PgWRKY genes were expressed after induction with methyl jasmonate (MeJA). Co-expressing PgWRKY genes with triterpenoid biosynthesis pathway genes revealed four PgWRKY genes that may have functions in triterpenoid biosynthesis. Additionally, functional annotation and protein-protein interaction analysis of PgWRKY proteins were performed to predict their roles in potential regulatory networks. Thus, we systematically analyzed the structure, evolution, and expression patterns of PgWRKY genes to provide an important theoretical basis for further exploring the molecular basis and regulatory mechanism of WRKY TFs in triterpenoid biosynthesis.

桔梗(Platycodon grandflorus)是一种多年生开花植物,广泛分布在中国和韩国,是一种极好的食品和药用资源。桔梗的主要活性成分为三萜皂苷。WRKY转录因子(WRKY transcription factors, TFs)是植物中最大的基因家族之一,在调控植物萜类物质积累、生理代谢和逆境反应等方面发挥着重要作用。对其他药用植物的大量研究已被报道;然而,对桔梗中WRKY基因的了解甚少。在本研究中,在桔梗的转录组中鉴定了27个PgWRKYs。系统发育分析表明,PgWRKY基因可聚为3个主群和5个亚群。转录组分析显示,皖南桐城市和皖北太和县不同组织中PgWRKY基因的表达模式存在差异。基于RNA测序和qRT-PCR分析的基因表达分析显示,大部分PgWRKY基因在茉莉酸甲酯(MeJA)诱导后表达。PgWRKY基因与三萜生物合成途径基因共表达,揭示了四个可能在三萜生物合成中起作用的PgWRKY基因。此外,还对PgWRKY蛋白进行了功能注释和蛋白-蛋白相互作用分析,以预测其在潜在调控网络中的作用。因此,我们系统地分析了PgWRKY基因的结构、进化和表达模式,为进一步探索WRKY TFs在三萜生物合成中的分子基础和调控机制提供了重要的理论依据。
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引用次数: 6
Molecular mechanisms of Piriformospora indica mediated growth promotion in plants. 梨形孢子菌促进植物生长的分子机制。
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2096785
Anish Kundu, Jyothilakshmi Vadassery

Piriformospora indica is a root endophyte having a vast host range in plants. Plant growth promotion is a hallmark of the symbiotic interaction of P. indica with its hosts. As a plant growth-promoting microorganism, it is important to know the mechanisms involved in growth induction. Hitherto, multiple reports have demonstrated various molecular mechanisms of P. indica-mediated growth promotion, including protein kinase-mediated pathway, enhanced nutrient uptake and polyamine-mediated growth phytohormone elevation. Here, we briefly present a discussion on the state-of-the-art molecular mechanisms of P. indica-mediated growth promotion in host plants, in order to obtain a future prospect on utilization of this microorganism for sustainable agriculture.

Piriformospora indica是一种在植物中具有广泛寄主范围的根内生菌。促进植物生长是籼稻与寄主共生相互作用的一个标志。作为促进植物生长的微生物,了解其生长诱导机制具有重要意义。迄今为止,已有多篇报道证明了P. indica介导的促进生长的多种分子机制,包括蛋白激酶介导的途径、增强营养摄取和多胺介导的生长激素升高。在此,我们简要介绍了单孢霉在寄主植物中促进生长的最新分子机制,以期对该微生物在可持续农业中的应用前景进行展望。
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引用次数: 7
Effects of indirect plant-plant interaction via root exudate on growth and leaf chemical contents in Rumex obtusifolius. 植物与植物间通过根系分泌物间接相互作用对黑叶梅生长和叶片化学物质含量的影响。
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2050628
Haruna Ohsaki, Akira Yamawo

Belowground plant-plant interactions can affect the concentrations of leaf chemicals, but the mechanism is not clear. Here, we investigated the effects of intra- and interspecific root exudates on the growth and leaf chemical content of Rumex obtusifolius. Seedlings of R. obtusifolius were grown with exposure to root exudates collected from other R. obtusifolius plants or from Trifolium repens, Festuca ovina, or Plantago asiatica plants, and the total phenolic, condensed tannin, dry biomass, and chlorophyll contents of the leaves were examined. The root exudates from conspecific plants had no effect on the total phenolic, condensed tannin, and chlorophyll contents of the leaves but did significantly reduce the dry leaf biomass. Root exudates from heterospecific plants had different effects depending on the species. These results were different from the results of a previous study that examined the effects of direct plant-plant interaction in R. obtusifolius. Thus, indirect interaction via root exudates induces different effects in leaves from direct interaction.

地下植物与植物之间的相互作用可以影响叶片化学物质的浓度,但其机制尚不清楚。本研究研究了种内和种间根分泌物对弯叶鲁墨生长和叶片化学物质含量的影响。将黑叶参幼苗与其他黑叶参植物、三叶草、羊茅和车前草的根系分泌物相接触,测定其叶片的总酚、浓缩单宁、干生物量和叶绿素含量。同生植物根系分泌物对叶片总酚、缩合单宁和叶绿素含量没有影响,但显著降低了干叶生物量。异种植物根系分泌物的影响因种而异。这些结果不同于先前的研究结果,研究了植物与植物之间直接相互作用对钝叶黄的影响。因此,通过根系分泌物的间接相互作用对叶片的影响不同于直接相互作用。
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引用次数: 0
BTB and TAZ domain protein BT4 positively regulates the resistance to Botrytis cinerea in Arabidopsis. BTB和TAZ结构域蛋白BT4正调控拟南芥对灰霉病的抗性。
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2104003
Fan Zhou, Kang Zhang, Xu Zheng, Guanyu Wang, Hongzhe Cao, Jihong Xing, Jingao Dong

BT4 gene was identified to play an important role in Arabidopsis resistance to pst DC3000 in preliminary studies. However, the specific function and molecular mechanism of BT4 gene in regulation of Arabidopsis resistance to Botrytis cinerea had not been described to date. In this study, we found that the expression of BT4 was induced by wounding and B. cinerea inoculation in Arabidopsis. After inoculated with B. cinerea, T-DNA insertion mutants of the BT4 gene, bt4, showed significant susceptibility symptoms, whereas no significant symptoms were found in wild-type (WT), the complemented transgenic plants (CE), and the overexpression transgenic plants (OE). After inoculated with B. cinerea, the expression levels of JAR1 and PDF1.2 genes in bt4 mutant were induced; however, the expression levels of these genes in bt4 mutant were significantly lower than those in the WT, CE, and OE. These results indicated that the BT4 positively regulate the expression of genes in JA/ET signaling pathways. Therefore, the BT4 may be involved in the regulation of JA/ET signaling pathways to affect Arabidopsis resistance to B. cinerea.

初步研究发现BT4基因在拟南芥对pst DC3000的抗性中起重要作用。然而,BT4基因调控拟南芥对灰霉病抗性的具体功能和分子机制尚未见报道。在本研究中,我们发现在拟南芥中,BT4的表达受到损伤和接种灰孢杆菌的诱导。接种灰孢杆菌后,BT4基因的T-DNA插入突变体BT4表现出明显的易感症状,而野生型(WT)、转基因植株(CE)和过表达转基因植株(OE)均未发现明显的易感症状。接种灰葡萄球菌后,诱导bt4突变体中JAR1和PDF1.2基因的表达水平;然而,这些基因在bt4突变体中的表达水平明显低于WT、CE和OE。这些结果表明,BT4正调控JA/ET信号通路中基因的表达。因此,BT4可能参与调控JA/ET信号通路,影响拟南芥对灰孢杆菌的抗性。
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引用次数: 0
Exogenous brassinosteroids promotes root growth, enhances stress tolerance, and increases yield in maize. 外源油菜素内酯促进玉米根系生长,增强抗逆性,提高产量。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2095139
Hao Zhang, Dan Zhao, Ziyan Tang, Ying Zhang, Ke Zhang, Jingao Dong, Fengru Wang

Brassinosteroids (BRs) regulate of maize (Zea mays L.) growth, but the underlying molecular mechanism remains unclear. In this study, we used a multi-disciplinary approach to determine how BRs regulate maize morphology and physiology during development. Treatment with the BRs promoted primary root the elongation and growth during germination, and the early development of lateral roots. BRs treatment during the middle growth stage increased the levels of various stress resistance factors, and enhanced resistance to lodging, likely by protecting the plant against stem rot and sheath rot. BRs had no significant effect on plant height during late growth, but it increased leaf angle and photosynthetic efficiency, as well as yield and quality traits. Our findings increase our understanding of the regulatory effects of BR on maize root growth and development and the mechanism by which BR improves disease resistance, which could further the potential for using BR to improve maize yield.

油菜素内酯(BRs)调节玉米(Zea mays L.)的生长,但其潜在的分子机制尚不清楚。在这项研究中,我们采用多学科方法来确定BRs如何调节玉米发育过程中的形态和生理。BRs处理促进了萌发期初生根的伸长和生长,促进了侧根的早期发育。在生育中期施用BRs提高了植株的各种抗逆性因子水平,并增强了抗倒伏能力,这可能是通过保护植株免受茎腐和鞘腐的影响。BRs对生育后期的株高没有显著影响,但增加了叶片角和光合效率,以及产量和品质性状。研究结果进一步揭示了BR对玉米根系生长发育的调控作用以及BR提高抗病性的机制,为利用BR提高玉米产量提供了新的思路。
{"title":"Exogenous brassinosteroids promotes root growth, enhances stress tolerance, and increases yield in maize.","authors":"Hao Zhang, Dan Zhao, Ziyan Tang, Ying Zhang, Ke Zhang, Jingao Dong, Fengru Wang","doi":"10.1080/15592324.2022.2095139","DOIUrl":"10.1080/15592324.2022.2095139","url":null,"abstract":"<p><p>Brassinosteroids (BRs) regulate of maize (<i>Zea mays</i> L.) growth, but the underlying molecular mechanism remains unclear. In this study, we used a multi-disciplinary approach to determine how BRs regulate maize morphology and physiology during development. Treatment with the BRs promoted primary root the elongation and growth during germination, and the early development of lateral roots. BRs treatment during the middle growth stage increased the levels of various stress resistance factors, and enhanced resistance to lodging, likely by protecting the plant against stem rot and sheath rot. BRs had no significant effect on plant height during late growth, but it increased leaf angle and photosynthetic efficiency, as well as yield and quality traits. Our findings increase our understanding of the regulatory effects of BR on maize root growth and development and the mechanism by which BR improves disease resistance, which could further the potential for using BR to improve maize yield.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":" ","pages":"2095139"},"PeriodicalIF":2.8,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9255028/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40463076","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A glutamate receptor-like gene is involved in ABA-mediated growth control in Physcomitrium (Physcomitrella) patens. 一种谷氨酸受体样基因参与aba介导的小绒泡菌生长控制。
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2145057
Ya Wang, Dongsheng Yu, Hongmiao Zhao, Lanlan Jiang, Lei Gao, Yanan Song, Zebin Liu, Fang Bao, Congcong Hou, Yikun He, Chuanli Ju, Legong Li, Dongdong Kong

Plant glutamate receptor homologs (GLRs), which function as key calcium channels, play pivotal roles in various developmental processes as well as stress responses. The moss Physcomitrium patens, a representative of the earliest land plant lineage, possess multiple pathways of hormone signaling for coordinating growth and adaptation responses. However, it is not clear whether GLRs are connected to hormone-mediated growth control in the moss. In this study, we report that one of the two GLRs in P. patens, PpGLR1, involves in abscisic acid (ABA)-mediated growth regulation. ABA represses the growth of wild-type moss, and intriguingly, the PpGLR1 transcript levels are significantly increased in response to ABA treatment, based on both gene expression and the PpGLR1pro::GUS reporter results. Furthermore, the growth of Ppglr1 knockout moss mutants is hypersensitive to ABA treatment. These results suggest that PpGLR1 plays a critical role in ABA-mediated growth regulation, which provide useful information for our further investigation of the regulatory mechanism between Ca2+ signal and ABA in moss growth control.

植物谷氨酸受体同源物(GLRs)作为钙离子通道,在植物的各种发育过程和逆境反应中起着关键作用。作为最早的陆生植物谱系的代表,藓类Physcomitrium patens具有多种激素信号通路来协调生长和适应反应。然而,目前尚不清楚glr是否与苔藓中激素介导的生长控制有关。在这项研究中,我们报道了植物中两个glr之一PpGLR1参与脱落酸(ABA)介导的生长调节。ABA抑制野生型苔藓的生长,有趣的是,基于基因表达和PpGLR1pro::GUS报告结果,PpGLR1转录物水平在ABA处理下显著增加。此外,敲除Ppglr1的苔藓突变体的生长对ABA处理敏感。这些结果表明PpGLR1在ABA介导的生长调控中发挥了关键作用,为我们进一步研究Ca2+信号与ABA在苔藓生长调控中的调控机制提供了有用的信息。
{"title":"A glutamate receptor-like gene is involved in ABA-mediated growth control in <i>Physcomitrium</i> (<i>Physcomitrella) patens</i>.","authors":"Ya Wang,&nbsp;Dongsheng Yu,&nbsp;Hongmiao Zhao,&nbsp;Lanlan Jiang,&nbsp;Lei Gao,&nbsp;Yanan Song,&nbsp;Zebin Liu,&nbsp;Fang Bao,&nbsp;Congcong Hou,&nbsp;Yikun He,&nbsp;Chuanli Ju,&nbsp;Legong Li,&nbsp;Dongdong Kong","doi":"10.1080/15592324.2022.2145057","DOIUrl":"https://doi.org/10.1080/15592324.2022.2145057","url":null,"abstract":"<p><p>Plant glutamate receptor homologs (GLRs), which function as key calcium channels, play pivotal roles in various developmental processes as well as stress responses. The moss <i>Physcomitrium patens</i>, a representative of the earliest land plant lineage, possess multiple pathways of hormone signaling for coordinating growth and adaptation responses. However, it is not clear whether GLRs are connected to hormone-mediated growth control in the moss. In this study, we report that one of the two GLRs in <i>P. patens</i>, PpGLR1, involves in abscisic acid (ABA)-mediated growth regulation. ABA represses the growth of wild-type moss, and intriguingly, the <i>PpGLR1</i> transcript levels are significantly increased in response to ABA treatment, based on both gene expression and the <i>PpGLR1pro::GUS</i> reporter results. Furthermore, the growth of <i>Ppglr1</i> knockout moss mutants is hypersensitive to ABA treatment. These results suggest that PpGLR1 plays a critical role in ABA-mediated growth regulation, which provide useful information for our further investigation of the regulatory mechanism between Ca<sup>2+</sup> signal and ABA in moss growth control.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":"17 1","pages":"2145057"},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9677993/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10413523","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Silencing of δ-aminolevulinic acid dehydratase via virus induced gene silencing promotes callose deposition in plant phloem. 病毒诱导的δ-氨基乙酰丙酸脱水酶基因沉默促进植物韧皮部胼胝质沉积。
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2021.2024733
Nabil Killiny, Shelley E Jones, Pedro Gonzalez-Blanco

The δ-aminolevulinic acid dehydratase (ALAD) enzyme is an intermediate in the biosynthetic pathway of tetrapyrroles. It combines two δ-aminolevulinic acid (δ-ALA) molecules to form the pyrrole, porphobilinogen, an important precursor for plant pigments involved in photosynthesis, respiration, light-sensing, and nutrient uptake. Our recent efforts showed that, in citrus, silencing of ALAD gene via Citrus tristeza virus-induced gene silencing, caused yellow spots and necrosis in leaves and in developing new shoots. Silencing of ALAD gene reduced leaf pigments and altered leaf metabolites. Moreover, total phenolic content, H2O2, and reactive oxygen species (ROS) increased, indicating that silencing of ALAD induced severe stress. Herein, we hypothesized that conditions including lower sucrose, elevated ROS, alteration of microRNA involved in RNAi regulatory protein Argonaute 1 (AGO1) and ROS lead to higher deposition of callose in phloem tissues. Using aniline blue staining and gene expression analysis of callose synthases, we showed significant deposition of callose in ALAD-silenced citrus.

δ-氨基乙酰丙酸脱水酶(ALAD)是四吡啶生物合成途径中的中间体。它结合两个δ-氨基乙酰丙酸(δ-ALA)分子形成吡咯,即卟绿素原,是植物色素的重要前体,参与光合作用、呼吸作用、光感和营养吸收。我们最近的研究表明,在柑橘中,通过柑橘tristeza病毒诱导的基因沉默来沉默ALAD基因,导致叶片和新芽发育中的黄斑和坏死。ALAD基因的沉默减少了叶片色素,改变了叶片代谢产物。此外,总酚含量、H2O2和活性氧(ROS)增加,表明ALAD沉默诱导了严重的应激。在此,我们假设低蔗糖、ROS升高、参与RNAi调节蛋白Argonaute 1 (AGO1)和ROS的microRNA改变等条件导致韧皮部组织中胼胝质的沉积增加。通过苯胺蓝染色和胼胝质合成酶基因表达分析,我们发现alad沉默柑橘中胼胝质沉积显著。
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引用次数: 3
A DEK domain-containing protein GhDEK2D mediated Gossypium hirsutum enhanced resistance to Verticillium dahliae. 含有DEK结构域的蛋白GhDEK2D介导的棉花增强了对大丽花黄萎病的抗性。
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2021.2024738
Jinglong Zhou, Lihong Zhao, Yajie Wu, Xiaojian Zhang, Sheng Cheng, Feng Wei, Yalin Zhang, Heqin Zhu, Yi Zhou, Zili Feng, Hongjie Feng

DEK is associated with DNA replication and break repair, mRNA splicing, and transcriptional regulation, which had been studied in humans and mammals. The function of DEK in plants was poorly understood. In this study, GhDEK2D was identified in Gossypium hirsutum by genome-wide and post-translational modifications. GhDEK2D had been phosphorylated, acetylated and ubiquitylated under Verticillium dahliae (Vd) challenge. The GhDEK2D-silenced cotton decreased resistance against Vd. In GhDEK2D-silenced cotton plants, the reactive oxygen species was activated, the callose, xylogen, hypersensitive reaction (HR) and expression levels of defense-related genes were reduced. Homozygous overexpressing-GhDEK2D transgenic Arabidopsis lines were more resistant to Verticillium wilt (Vw). We propose that GhDEK2D was a potential molecular target for improving resistance to Vw in cotton.

DEK与DNA复制和断裂修复、mRNA剪接和转录调控有关,已在人类和哺乳动物中进行了研究。DEK在植物中的作用尚不清楚。在这项研究中,通过全基因组和翻译后修饰,在绵棉中鉴定出了GhDEK2D。GhDEK2D在大丽花黄萎病菌(Verticillium dahliae, Vd)侵染下发生磷酸化、乙酰化和泛素化。ghdek2d沉默棉降低了对Vd的抗性。在ghdek2d沉默的棉花植株中,活性氧被激活,胼胝质、木质、超敏反应(hypersensitive reaction, HR)和防御相关基因的表达水平降低。纯合子过表达ghdek2d转基因拟南芥株系对黄萎病(Verticillium wilt, Vw)的抗性更强。我们认为GhDEK2D是提高棉花对Vw抗性的潜在分子靶点。
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引用次数: 4
Relationship between reduction in rice (Nipponbare) leaf blade size under elevated CO2 and miR396-GRF module. CO2升高条件下水稻叶片大小减小与miR396-GRF模块的关系
IF 2.9 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2041280
Yonghyun Kim, Sumire Takahashi, Mitsue Miyao

Elevated CO2 (eCO2; 1000 ppm) influences developing rice leaf formation, reducing leaf blade length and width as compared to rice grown under ambient CO2 (aCO2; 400 ppm). Since micro RNAs (miRNAs) are known to play multiple roles in plant development, we hypothesized that miRNAs might be involved in modulating leaf size under eCO2 conditions. To identify miRNAs responding to eCO2, we profiled miRNA levels in developing rice leaves (P4; plastochron number of the fourth-youngest leaf) under eCO2 using small RNA-seq. We detected 18 mature miRNA sequences for which expression levels varied more than two-fold between the eCO2 and aCO2 conditions. Among them, only miR396e and miR396f significantly differed between the two conditions. Additionally, the expression of growth-regulating factors (GRFs), potential target mRNA of miR396s, were repressed under the eCO2 condition. We used an antisense oligonucleotide approach to confirm that single-strand DNA corresponding to the miR396e sequence effectively downregulated GRF expression in developing leaves, reducing the leaf blade length, such as for rice grown under eCO2. These results suggest that the miR396-GRF module is crucially relevant to controlling rice leaf blade length in eCO2 environments.

二氧化碳(eCO2)升高;与在环境CO2 (aCO2)下生长的水稻相比,1000 ppm的二氧化碳影响水稻叶片形成,减少叶片长度和宽度;400 ppm)。由于已知微rna (miRNAs)在植物发育中发挥多种作用,我们假设miRNAs可能参与了eCO2条件下叶片大小的调节。为了鉴定对eCO2有响应的miRNA,我们分析了发育中的水稻叶片中的miRNA水平(P4;利用小RNA-seq测定eCO2作用下第四年轻叶片的质体生成期数。我们检测到18个成熟的miRNA序列,其表达水平在eCO2和aCO2条件下变化超过两倍。其中,只有miR396e和miR396f在两种情况下存在显著差异。此外,在eCO2条件下,mir396的潜在靶mRNA——生长调节因子(GRFs)的表达受到抑制。我们使用反义寡核苷酸方法证实,miR396e序列对应的单链DNA在发育叶片中有效下调GRF表达,减少叶片长度,例如在eCO2下生长的水稻。这些结果表明,miR396-GRF模块在eCO2环境下对水稻叶片长度的控制至关重要。
{"title":"Relationship between reduction in rice (Nipponbare) leaf blade size under elevated CO<sub>2</sub> and miR396-<i>GRF</i> module.","authors":"Yonghyun Kim,&nbsp;Sumire Takahashi,&nbsp;Mitsue Miyao","doi":"10.1080/15592324.2022.2041280","DOIUrl":"https://doi.org/10.1080/15592324.2022.2041280","url":null,"abstract":"<p><p>Elevated CO<sub>2</sub> (eCO<sub>2</sub>; 1000 ppm) influences developing rice leaf formation, reducing leaf blade length and width as compared to rice grown under ambient CO<sub>2</sub> (aCO<sub>2</sub>; 400 ppm). Since micro RNAs (miRNAs) are known to play multiple roles in plant development, we hypothesized that miRNAs might be involved in modulating leaf size under eCO<sub>2</sub> conditions. To identify miRNAs responding to eCO<sub>2</sub>, we profiled miRNA levels in developing rice leaves (P4; plastochron number of the fourth-youngest leaf) under eCO<sub>2</sub> using small RNA-seq. We detected 18 mature miRNA sequences for which expression levels varied more than two-fold between the eCO<sub>2</sub> and aCO<sub>2</sub> conditions. Among them, only miR396e and miR396f significantly differed between the two conditions. Additionally, the expression of <i>growth-regulating factors</i> (<i>GRFs</i>), potential target mRNA of miR396s, were repressed under the eCO<sub>2</sub> condition. We used an antisense oligonucleotide approach to confirm that single-strand DNA corresponding to the miR396e sequence effectively downregulated <i>GRF</i> expression in developing leaves, reducing the leaf blade length, such as for rice grown under eCO<sub>2</sub>. These results suggest that the miR396-<i>GRF</i> module is crucially relevant to controlling rice leaf blade length in eCO<sub>2</sub> environments.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":" ","pages":"2041280"},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/31/08/KPSB_17_2041280.PMC8959511.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40314232","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
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Plant Signaling & Behavior
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