首页 > 最新文献

Preparative Biochemistry & Biotechnology最新文献

英文 中文
Folic acid-conjugated biopolymeric nanoparticles for targeted delivery of ixabepilone in breast cancer. 叶酸缀合生物聚合物纳米颗粒靶向递送伊沙匹龙在乳腺癌。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-02-09 DOI: 10.1080/10826068.2026.2621868
Ayça Mehmetoğlu Al, İskender İnce, Erkan Kahraman, Erdem Göker, Yeliz Yıldırım

Ixabepilone (IXA) is an FDA-approved chemotherapeutic agent for metastatic breast cancer; however, its clinical use is limited by severe toxicity to healthy tissues. To improve its therapeutic index, tumor-targeted drug delivery systems are required. In this study, IXA was encapsulated for the first time into folic acid (FA)-functionalized biopolymeric nanoparticles (NPs) to promote preferential delivery to folate receptor (FR)-expressing breast cancer cells. Chitosan (CS) and alginate (ALG) were conjugated with FA to fabricate targeted NP systems, and IXA-loaded formulations were optimized in terms of encapsulation efficiency and particle size. The optimized IXA/FACS and IXA/FAALG NPs exhibited encapsulation efficiencies of 51.3 ± 4.6% and 47.6 ± 5.0%, with mean particle sizes of approximately 155 nm. In vitro release studies under physiological and tumor-mimicking pH conditions demonstrated pH-responsive behavior, with increased IXA release at acidic pH (5.5). Release kinetics analysis indicated diffusion-controlled and anomalous transport mechanisms according to the Higuchi and Korsmeyer-Peppas models. Cytotoxicity studies on MDA-MB-231 and MCF-7 breast cancer cell lines revealed enhanced cytotoxic effects of FA-conjugated IXA-loaded NPs in FR-positive MDA-MB-231 cells compared to MCF-7 cells, suggesting preferential FR-mediated cellular interaction. Overall, FA-functionalized CS and ALG NPs represent a promising in vitro platform for targeted IXA delivery in FR-expressing breast cancer therapy.

Ixabepilone (IXA)是fda批准的用于转移性乳腺癌的化疗药物;然而,由于对健康组织有严重毒性,其临床应用受到限制。为了提高其治疗指数,需要肿瘤靶向给药系统。在这项研究中,IXA首次被包裹在叶酸(FA)功能化的生物聚合物纳米颗粒(NPs)中,以促进优先递送到表达叶酸受体(FR)的乳腺癌细胞。将壳聚糖(CS)和海藻酸盐(ALG)与FA偶联制备靶向NP体系,并从包封效率和粒径两方面对ixa负载配方进行了优化。优化后的IXA/FACS和IXA/FAALG NPs包封效率分别为51.3±4.6%和47.6±5.0%,平均粒径约为155 nm。生理和肿瘤模拟pH条件下的体外释放研究显示出pH响应行为,酸性pH(5.5)下IXA释放增加。释放动力学分析表明扩散控制和异常转运机制符合Higuchi和Korsmeyer-Peppas模型。对MDA-MB-231和MCF-7乳腺癌细胞系的细胞毒性研究显示,与MCF-7细胞相比,fa偶联的ixa负载NPs在fr阳性的MDA-MB-231细胞中的细胞毒性作用增强,表明fr介导的细胞相互作用优先。总的来说,fa功能化的CS和ALG NPs代表了在表达fr的乳腺癌治疗中靶向IXA的体外平台。
{"title":"Folic acid-conjugated biopolymeric nanoparticles for targeted delivery of ixabepilone in breast cancer.","authors":"Ayça Mehmetoğlu Al, İskender İnce, Erkan Kahraman, Erdem Göker, Yeliz Yıldırım","doi":"10.1080/10826068.2026.2621868","DOIUrl":"https://doi.org/10.1080/10826068.2026.2621868","url":null,"abstract":"<p><p>Ixabepilone (IXA) is an FDA-approved chemotherapeutic agent for metastatic breast cancer; however, its clinical use is limited by severe toxicity to healthy tissues. To improve its therapeutic index, tumor-targeted drug delivery systems are required. In this study, IXA was encapsulated for the first time into folic acid (FA)-functionalized biopolymeric nanoparticles (NPs) to promote preferential delivery to folate receptor (FR)-expressing breast cancer cells. Chitosan (CS) and alginate (ALG) were conjugated with FA to fabricate targeted NP systems, and IXA-loaded formulations were optimized in terms of encapsulation efficiency and particle size. The optimized IXA/FACS and IXA/FAALG NPs exhibited encapsulation efficiencies of 51.3 ± 4.6% and 47.6 ± 5.0%, with mean particle sizes of approximately 155 nm. <i>In vitro</i> release studies under physiological and tumor-mimicking pH conditions demonstrated pH-responsive behavior, with increased IXA release at acidic pH (5.5). Release kinetics analysis indicated diffusion-controlled and anomalous transport mechanisms according to the Higuchi and Korsmeyer-Peppas models. Cytotoxicity studies on MDA-MB-231 and MCF-7 breast cancer cell lines revealed enhanced cytotoxic effects of FA-conjugated IXA-loaded NPs in FR-positive MDA-MB-231 cells compared to MCF-7 cells, suggesting preferential FR-mediated cellular interaction. Overall, FA-functionalized CS and ALG NPs represent a promising <i>in vitro</i> platform for targeted IXA delivery in FR-expressing breast cancer therapy.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-16"},"PeriodicalIF":1.9,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143259","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Selenopolysaccharides: advances in synthesis, structural characterization and biological applications. 硒多糖的合成、结构表征及生物应用研究进展。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-02-09 DOI: 10.1080/10826068.2026.2625195
Santhoshkumar Murali, Nallusamy Duraisamy, Mohammed Mujahid Alam, Abdullah G Al-Sehemi, Kuppusamy Sathishkumar

Selenopolysaccharides exhibit potent antioxidant, immunomodulatory and anticancer properties enhancing their biological effectiveness compared to non-selenium variants. Their therapeutic potential in oxidative stress-related disorders is highlighted by improved bioavailability and biocompatibility. This review evaluates selenopolysaccharide research, aiming to resolve issues related to extraction methods, structural characterization and mechanisms that limit their development. Key objectives include analyzing extraction techniques, structural characteristics, biological activities, mechanisms of action and challenges related to clinical applications. In this review, we highlighted the use of various extraction methods and employed spectroscopic and chromatographic analyses. Findings show that microwave-assisted chemical selenylation and nanoparticle synthesis enhance selenium incorporation and bioactivity. Advanced structural analyses revealed diverse selenium valence states affecting functional outcomes. Selenopolysaccharides have potent effects via the MAPK, NF-κB, and TLR signaling pathways, demonstrating synergistic interactions between selenium and polysaccharides. Despite better bioavailability and lower toxicity compared to inorganic selenium, variability in composition and lack of clinical validation hinder their potential. To fully leverage selenopolysaccharides as functional food ingredients and pharmacological agents, it is essential to optimize extraction, elucidate their structures and understand their mechanisms, while addressing concerns regarding standardization, safety and efficacy for their use in managing inflammation, cancer and metabolic disorders.

硒多糖表现出强大的抗氧化、免疫调节和抗癌特性,与非硒变体相比,其生物效应增强。它们在氧化应激相关疾病中的治疗潜力因其提高的生物利用度和生物相容性而得到强调。本文就硒多糖的提取方法、结构表征和作用机制等方面的研究进展进行综述。主要目标包括分析提取技术、结构特征、生物活性、作用机制和与临床应用相关的挑战。在这篇综述中,我们重点介绍了各种提取方法的使用,并采用光谱和色谱分析。结果表明,微波辅助的化学硒化和纳米颗粒合成提高了硒的掺入和生物活性。先进的结构分析揭示了不同的硒价态影响功能结果。硒多糖通过MAPK、NF-κB和TLR信号通路具有强大的作用,表明硒和多糖之间存在协同作用。尽管与无机硒相比,生物利用度更高,毒性更低,但成分的可变性和缺乏临床验证阻碍了它们的潜力。为了充分利用硒多糖作为功能性食品成分和药理制剂,必须优化提取、阐明其结构和了解其作用机制,同时解决其在治疗炎症、癌症和代谢紊乱方面的标准化、安全性和有效性问题。
{"title":"Selenopolysaccharides: advances in synthesis, structural characterization and biological applications.","authors":"Santhoshkumar Murali, Nallusamy Duraisamy, Mohammed Mujahid Alam, Abdullah G Al-Sehemi, Kuppusamy Sathishkumar","doi":"10.1080/10826068.2026.2625195","DOIUrl":"https://doi.org/10.1080/10826068.2026.2625195","url":null,"abstract":"<p><p>Selenopolysaccharides exhibit potent antioxidant, immunomodulatory and anticancer properties enhancing their biological effectiveness compared to non-selenium variants. Their therapeutic potential in oxidative stress-related disorders is highlighted by improved bioavailability and biocompatibility. This review evaluates selenopolysaccharide research, aiming to resolve issues related to extraction methods, structural characterization and mechanisms that limit their development. Key objectives include analyzing extraction techniques, structural characteristics, biological activities, mechanisms of action and challenges related to clinical applications. In this review, we highlighted the use of various extraction methods and employed spectroscopic and chromatographic analyses. Findings show that microwave-assisted chemical selenylation and nanoparticle synthesis enhance selenium incorporation and bioactivity. Advanced structural analyses revealed diverse selenium valence states affecting functional outcomes. Selenopolysaccharides have potent effects via the MAPK, NF-κB, and TLR signaling pathways, demonstrating synergistic interactions between selenium and polysaccharides. Despite better bioavailability and lower toxicity compared to inorganic selenium, variability in composition and lack of clinical validation hinder their potential. To fully leverage selenopolysaccharides as functional food ingredients and pharmacological agents, it is essential to optimize extraction, elucidate their structures and understand their mechanisms, while addressing concerns regarding standardization, safety and efficacy for their use in managing inflammation, cancer and metabolic disorders.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-14"},"PeriodicalIF":1.9,"publicationDate":"2026-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143188","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A state-of-the-art in exploring microalgal vitamins: Advancements in production, extraction, market potential, applications, and perspectives for a sustainable future. 探索微藻维生素的最新进展:生产、提取、市场潜力、应用和可持续未来的前景。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-02-07 DOI: 10.1080/10826068.2026.2625200
Sourav Maity, Alok Kumar Yadav

Microalgae offer a sustainable and adaptable source of essential vitamins, making them a promising alternative to traditional synthetic and plant-based sources. As natural and bioavailable nutrients become increasingly important, microalgae such as Chlorella, Spirulina, Dunaliella, and Haematococcus, known for their ability to synthesize a wide range of vitamins, including A, B, C, D, E, and K, are gaining more attention. The biosynthesis pathways of these vitamins are explored, with a focus on stress-induced techniques and the impact of genetic engineering on production yields. Recent innovations in photobioreactors and hybrid open-closed systems, as well as advanced extraction methods, are explored for their potential to enhance efficiency and sustainability in vitamin recovery. Their antioxidant, anti-inflammatory, and immune-boosting properties make microalgal vitamins valuable tools for addressing global nutritional deficiencies and improving overall health. Despite significant progress, challenges persist, including high production costs, scalability issues, and regulatory concerns. The review emphasizes the importance of developing cost-effective farming systems, advanced genetic engineering, and modern extraction technologies, and suggests directions for future research. Vitamins from microalgae hold great potential for transforming the global nutraceutical and pharmaceutical industries, fostering innovation, creating revenue opportunities, and promoting a more sustainable and eco-friendly future.

微藻提供了一种可持续和适应性强的必需维生素来源,使其成为传统合成和植物来源的有希望的替代品。随着天然和生物可利用的营养物质变得越来越重要,小球藻、螺旋藻、杜氏藻和红球藻等微藻因其能够合成多种维生素(包括a、B、C、D、E和K)而受到越来越多的关注。探索了这些维生素的生物合成途径,重点是应激诱导技术和基因工程对产量的影响。最近在光生物反应器和混合开闭系统的创新,以及先进的提取方法,探索其潜力,以提高效率和可持续性的维生素回收。微藻维生素具有抗氧化、抗炎和增强免疫力的特性,是解决全球营养缺乏和改善整体健康的宝贵工具。尽管取得了重大进展,但挑战依然存在,包括高生产成本、可扩展性问题和监管问题。这篇综述强调了开发具有成本效益的农业系统、先进的基因工程和现代提取技术的重要性,并提出了未来的研究方向。来自微藻的维生素在改变全球营养保健和制药行业、促进创新、创造收入机会以及促进更可持续和环保的未来方面具有巨大潜力。
{"title":"A state-of-the-art in exploring microalgal vitamins: Advancements in production, extraction, market potential, applications, and perspectives for a sustainable future.","authors":"Sourav Maity, Alok Kumar Yadav","doi":"10.1080/10826068.2026.2625200","DOIUrl":"https://doi.org/10.1080/10826068.2026.2625200","url":null,"abstract":"<p><p>Microalgae offer a sustainable and adaptable source of essential vitamins, making them a promising alternative to traditional synthetic and plant-based sources. As natural and bioavailable nutrients become increasingly important, microalgae such as <i>Chlorella</i>, <i>Spirulina</i>, <i>Dunaliella</i>, and <i>Haematococcus</i>, known for their ability to synthesize a wide range of vitamins, including A, B, C, D, E, and K, are gaining more attention. The biosynthesis pathways of these vitamins are explored, with a focus on stress-induced techniques and the impact of genetic engineering on production yields. Recent innovations in photobioreactors and hybrid open-closed systems, as well as advanced extraction methods, are explored for their potential to enhance efficiency and sustainability in vitamin recovery. Their antioxidant, anti-inflammatory, and immune-boosting properties make microalgal vitamins valuable tools for addressing global nutritional deficiencies and improving overall health. Despite significant progress, challenges persist, including high production costs, scalability issues, and regulatory concerns. The review emphasizes the importance of developing cost-effective farming systems, advanced genetic engineering, and modern extraction technologies, and suggests directions for future research. Vitamins from microalgae hold great potential for transforming the global nutraceutical and pharmaceutical industries, fostering innovation, creating revenue opportunities, and promoting a more sustainable and eco-friendly future.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-28"},"PeriodicalIF":1.9,"publicationDate":"2026-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146132603","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Natural pigments: recent advances and challenges in production and application. 天然色素:生产和应用的最新进展和挑战。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-02-05 DOI: 10.1080/10826068.2026.2625199
Mahiti Gupta, Anshika Bhardwaj, Bhupesh Gupta, Paavan Singhal, Soniya Goyal, Raman Kumar, Ahmad Umar, Tubia Almas, Sotirios Baskoutas

Natural pigments, derived from plants, animals, and microorganisms, offer numerous health benefits, including antioxidant, anticancer, and antimicrobial properties. Microbial sources, in particular, provide scalable, eco-friendly alternatives. However, production faces challenges such as low yield, high cultivation costs, and limited color diversity. Recent biotechnological advances-such as metabolic engineering, omics technologies, CRISPR/Cas9 genome editing, and synthetic biology-are addressing these hurdles by enhancing pigment biosynthesis and expanding pigment varieties. These innovations facilitate industrial-scale production while reducing environmental impact. Natural pigments now find applications in food, cosmetics, pharmaceuticals, and textiles, often replacing synthetic dyes. Continued interdisciplinary research and industrial collaboration are essential to overcome production constraints and meet market demand. This review aims to provide a comprehensive and critical synthesis of natural pigments derived from plant, animal, and microbial sources, with a particular focus on recent advances in sustainable extraction technologies and biotechnological innovations such as metabolic engineering, CRISPR/Cas9, and synthetic biology. It systematically compares the advantages and limitations of pigments from different biological origins and evaluates their expanding applications in the food, pharmaceutical, nutraceutical, and biomedical sectors. Furthermore, the review identifies key challenges in scaling production and proposes future research directions to facilitate the transition from laboratory-scale discoveries to industrial applications.

从植物、动物和微生物中提取的天然色素对健康有许多好处,包括抗氧化、抗癌和抗菌特性。特别是微生物源,提供了可扩展的、环保的替代品。然而,生产面临着产量低、种植成本高、颜色多样性有限等挑战。最近的生物技术进步——如代谢工程、组学技术、CRISPR/Cas9基因组编辑和合成生物学——正在通过增强色素生物合成和扩大色素品种来解决这些障碍。这些创新促进了工业规模的生产,同时减少了对环境的影响。天然色素现在用于食品、化妆品、药品和纺织品,经常取代合成染料。持续的跨学科研究和工业合作对于克服生产限制和满足市场需求至关重要。本文综述了从植物、动物和微生物中提取天然色素的综合和关键合成方法,重点介绍了可持续提取技术和生物技术创新的最新进展,如代谢工程、CRISPR/Cas9和合成生物学。它系统地比较了来自不同生物来源的色素的优点和局限性,并评估了它们在食品、制药、营养保健和生物医学领域的广泛应用。此外,该综述确定了规模化生产的关键挑战,并提出了未来的研究方向,以促进从实验室规模的发现向工业应用的过渡。
{"title":"Natural pigments: recent advances and challenges in production and application.","authors":"Mahiti Gupta, Anshika Bhardwaj, Bhupesh Gupta, Paavan Singhal, Soniya Goyal, Raman Kumar, Ahmad Umar, Tubia Almas, Sotirios Baskoutas","doi":"10.1080/10826068.2026.2625199","DOIUrl":"https://doi.org/10.1080/10826068.2026.2625199","url":null,"abstract":"<p><p>Natural pigments, derived from plants, animals, and microorganisms, offer numerous health benefits, including antioxidant, anticancer, and antimicrobial properties. Microbial sources, in particular, provide scalable, eco-friendly alternatives. However, production faces challenges such as low yield, high cultivation costs, and limited color diversity. Recent biotechnological advances-such as metabolic engineering, omics technologies, CRISPR/Cas9 genome editing, and synthetic biology-are addressing these hurdles by enhancing pigment biosynthesis and expanding pigment varieties. These innovations facilitate industrial-scale production while reducing environmental impact. Natural pigments now find applications in food, cosmetics, pharmaceuticals, and textiles, often replacing synthetic dyes. Continued interdisciplinary research and industrial collaboration are essential to overcome production constraints and meet market demand. This review aims to provide a comprehensive and critical synthesis of natural pigments derived from plant, animal, and microbial sources, with a particular focus on recent advances in sustainable extraction technologies and biotechnological innovations such as metabolic engineering, CRISPR/Cas9, and synthetic biology. It systematically compares the advantages and limitations of pigments from different biological origins and evaluates their expanding applications in the food, pharmaceutical, nutraceutical, and biomedical sectors. Furthermore, the review identifies key challenges in scaling production and proposes future research directions to facilitate the transition from laboratory-scale discoveries to industrial applications.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-20"},"PeriodicalIF":1.9,"publicationDate":"2026-02-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146126431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
1H NMR-based metabolomics reveals bioactive compounds from the diatom Halamphora sp. extracted with different solvents. 基于核磁共振的代谢组学揭示了不同溶剂提取硅藻Halamphora sp.的生物活性化合物。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-02-01 DOI: 10.1080/10826068.2026.2623109
Siti Zulaikha Abd-Ghafar, Nur Khaleeda Zulaikha Zolkeflee, Ninie Baharuddin, Rudiyanto R, Maulidiani M, Natrah Ikhsan, Faridah Abas

The effect of different solvent extractions on the metabolome of the diatom Halamphora sp. and their correlation with 2,2-diphenyl-1-picrylhydrazyl (DPPH) and nitric oxide (NO) free radical scavenging activities were investigated using proton nuclear magnetic resonance (1H NMR)-based metabolomics. Evaluation of the DPPH and NO scavenging activities of Halamphora sp. extracted with methanol, ethanol, acetone, chloroform or hexane revealed that the acetone and chloroform extracts exhibited the highest activities, with DPPH scavenging of 44.7% and NO scavenging of 107.5%, respectively. In total, 30 metabolites were putatively identified including amino acids, fatty acids, sugars, phenolics, carotenoids and pigments. According to the partial least square model, metabolites contributing to the observed bioactivities included valine, alanine, leucine, linoleic acid, palmitic acid, sucrose, glucose, astaxanthin, canthaxanthin, lutein, zeaxanthin, violaxanthin, fucoxanthin, fucoxanthinol, choline and cholesterol. These findings demonstrate that the acetone and chloroform extracts of Halamphora sp. can serve as source of bioactive metabolites with antioxidant potential. Moreover, the present 1H NMR metabolomics approach proved to be a valuable tool for metabolites identification in microalgae, further supporting the potential of Halamphora sp. as a sustainable and nutritionally rich source for aquafeed applications.

采用质子核磁共振(1H NMR)代谢组学技术研究了不同溶剂提取物对Halamphora sp.代谢组学的影响及其与2,2-二苯基-1-picrylhydrazyl (DPPH)和一氧化氮(NO)自由基清除能力的相关性。通过对甲醇、乙醇、丙酮、氯仿和正己烷提取物的DPPH和NO清除活性的评价,丙酮和氯仿提取物的DPPH和NO清除活性最高,分别为44.7%和107.5%。总共鉴定出30种代谢物,包括氨基酸、脂肪酸、糖、酚类物质、类胡萝卜素和色素。根据偏最小二乘法模型,影响生物活性的代谢产物包括缬氨酸、丙氨酸、亮氨酸、亚油酸、棕榈酸、蔗糖、葡萄糖、虾青素、角黄素、叶黄素、玉米黄质、紫黄质、岩藻黄质、岩藻黄醇、胆碱和胆固醇。上述结果表明,海棠的丙酮和氯仿提取物可作为具有抗氧化活性的生物活性代谢物来源。此外,目前的1H NMR代谢组学方法被证明是一种有价值的微藻代谢物鉴定工具,进一步支持了Halamphora sp.作为可持续和营养丰富的水产饲料来源的潜力。
{"title":"<sup>1</sup>H NMR-based metabolomics reveals bioactive compounds from the diatom <i>Halamphora</i> sp. extracted with different solvents.","authors":"Siti Zulaikha Abd-Ghafar, Nur Khaleeda Zulaikha Zolkeflee, Ninie Baharuddin, Rudiyanto R, Maulidiani M, Natrah Ikhsan, Faridah Abas","doi":"10.1080/10826068.2026.2623109","DOIUrl":"https://doi.org/10.1080/10826068.2026.2623109","url":null,"abstract":"<p><p>The effect of different solvent extractions on the metabolome of the diatom <i>Halamphora</i> sp. and their correlation with 2,2-diphenyl-1-picrylhydrazyl (DPPH) and nitric oxide (NO) free radical scavenging activities were investigated using proton nuclear magnetic resonance (<sup>1</sup>H NMR)-based metabolomics. Evaluation of the DPPH and NO scavenging activities of <i>Halamphora</i> sp. extracted with methanol, ethanol, acetone, chloroform or hexane revealed that the acetone and chloroform extracts exhibited the highest activities, with DPPH scavenging of 44.7% and NO scavenging of 107.5%, respectively. In total, 30 metabolites were putatively identified including amino acids, fatty acids, sugars, phenolics, carotenoids and pigments. According to the partial least square model, metabolites contributing to the observed bioactivities included valine, alanine, leucine, linoleic acid, palmitic acid, sucrose, glucose, astaxanthin, canthaxanthin, lutein, zeaxanthin, violaxanthin, fucoxanthin, fucoxanthinol, choline and cholesterol. These findings demonstrate that the acetone and chloroform extracts of <i>Halamphora</i> sp. can serve as source of bioactive metabolites with antioxidant potential. Moreover, the present <sup>1</sup>H NMR metabolomics approach proved to be a valuable tool for metabolites identification in microalgae, further supporting the potential of <i>Halamphora</i> sp. as a sustainable and nutritionally rich source for aquafeed applications.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-13"},"PeriodicalIF":1.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100449","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bioprocess optimization of L-glutaminase production by a novel Klebsiella pneumoniae strain SCPRC using response surface methodology. 利用响应面法优化新型肺炎克雷伯菌SCPRC生产l -谷氨酰胺酶的生物工艺。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-02-01 DOI: 10.1080/10826068.2025.2607434
Smitha Chacko, Emmanuel Simon, Denoj Sebastian

L-Glutaminase (EC 3.5.1.2) is an industrially and therapeutically relevant enzyme that hydrolyzes L-glutamine to L-glutamic acid and ammonia. In this study, a potent L-glutaminase-producing bacterium, Klebsiella pneumoniae strain SCPRC, was isolated from soil samples in Kerala, India, using Minimal Glutamine Agar medium with phenol red indicator. The strain was identified by biochemical characterization and 16S rRNA sequencing (GenBank Accession No. OQ338363). Under unoptimized conditions, enzyme activity was 67.18 U/mL. Optimization of culture parameters using Response Surface Methodology with Central Composite Design (RSM-CCD) identified ammonium sulfate, K2HPO4, and incubation time as critical factors. The optimized conditions yielded 131.77 U/mL, representing a nearly two-fold improvement compared to baseline production. ANOVA confirmed the model's significance (p < 0.01) with a non-significant lack of fit. These findings establish K. pneumoniae SCPRC as a novel source of L-glutaminase and demonstrate the utility of statistical optimization for enhancing enzyme yields, supporting its potential application in therapeutic and food biotechnology.

谷氨酰胺酶(EC 3.5.1.2)是一种与工业和治疗相关的酶,可将l -谷氨酰胺水解为l -谷氨酸和氨。在这项研究中,从印度喀拉拉邦的土壤样品中分离出一种有效的l -谷氨酰胺酶产生细菌,肺炎克雷伯菌SCPRC,使用含有酚红指示剂的Minimal Glutamine Agar培养基。菌株经生化鉴定和16S rRNA测序(GenBank Accession No.;OQ338363)。在非优化条件下,酶活为67.18 U/mL。利用响应面法和中心复合设计(RSM-CCD)优化培养参数,确定硫酸铵、K2HPO4和培养时间为关键因素。优化后的产率为131.77 U/mL,与基准产率相比提高了近两倍。方差分析证实了模型的显著性。作为l -谷氨酰胺酶的新来源,并证明了统计优化在提高酶产量方面的效用,支持其在治疗和食品生物技术方面的潜在应用。
{"title":"Bioprocess optimization of L-glutaminase production by a novel <i>Klebsiella pneumoniae</i> strain SCPRC using response surface methodology.","authors":"Smitha Chacko, Emmanuel Simon, Denoj Sebastian","doi":"10.1080/10826068.2025.2607434","DOIUrl":"https://doi.org/10.1080/10826068.2025.2607434","url":null,"abstract":"<p><p>L-Glutaminase (EC 3.5.1.2) is an industrially and therapeutically relevant enzyme that hydrolyzes L-glutamine to L-glutamic acid and ammonia. In this study, a potent L-glutaminase-producing bacterium, <i>Klebsiella pneumoniae</i> strain SCPRC, was isolated from soil samples in Kerala, India, using Minimal Glutamine Agar medium with phenol red indicator. The strain was identified by biochemical characterization and 16S rRNA sequencing (GenBank Accession No. OQ338363). Under unoptimized conditions, enzyme activity was 67.18 U/mL. Optimization of culture parameters using Response Surface Methodology with Central Composite Design (RSM-CCD) identified ammonium sulfate, K<sub>2</sub>HPO<sub>4</sub>, and incubation time as critical factors. The optimized conditions yielded 131.77 U/mL, representing a nearly two-fold improvement compared to baseline production. ANOVA confirmed the model's significance (p < 0.01) with a non-significant lack of fit. These findings establish <i>K. pneumoniae</i> SCPRC as a novel source of L-glutaminase and demonstrate the utility of statistical optimization for enhancing enzyme yields, supporting its potential application in therapeutic and food biotechnology.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-10"},"PeriodicalIF":1.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100454","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Green-synthesis of iron nanoparticles using wild cherry laurel (Prunus laurocerasus L.) fruit extract and their patulin and HMF adsorption capacities along with biological activities. 利用野生樱桃月桂果实提取物合成铁纳米颗粒及其对展霉素和HMF的吸附能力和生物活性。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-02-01 DOI: 10.1080/10826068.2026.2620808
Havva Nur Kobya, Esra Gül, Ömer Karpuz, Cemalettin Baltacı

In this study, iron nanoparticles (YBFeNPs) were green-synthesized using the aqueous extract (YB-E) of wild cherry laurel (Prunus laurocerasus L.) fruit to evaluate their potential applications in food safety. The synthesized YBFeNPs were investigated through Fourier-transform infrared spectroscopy, X-ray diffraction, scanning electron microscopy, transmission electron microscopy, and energy-dispersive X-ray spectroscopy analyses. YBFeNPs showed higher total phenolic content, total flavonoid content, and total antioxidant capacity compared to the original extract, suggesting that plant metabolites enhance NP bioactivity. Antioxidant capacity was further validated by DPPH, ABTS, and FRAP assays, which demonstrated strong radical scavenging and reducing power. The antibacterial activity of YBFeNPs was assessed against Escherichia coli, Pseudomonas aeruginosa, Staphylococcus aureus, and Enterococcus faecalis, revealing concentration-dependent effects with the highest inhibition zone of 14.5 ± 0.4 mm for E. coli. The chemical composition of the YB-E extract was analyzed using liquid chromatography-tandem mass spectrometry, identifying quinic acid, a polyol, and phenolic compounds such as chlorogenic acid (1.45 mg/g) and naringenin (0.02 mg/g). Additionally, the adsorption capacities of YBFeNPs were investigated against patulin and hydroxymethylfurfural (HMF), toxic compounds posing significant threats to food safety. The NPs demonstrated effective adsorption of both patulin and HMF, achieving maximum adsorption rates of 61.05% and 46.12%, respectively, at a concentration of 5.0 g/L after 240 min.

本研究以野生樱桃月桂果实水提物(YB-E)为原料,绿色合成铁纳米颗粒(ybbenps),以评价其在食品安全方面的潜在应用价值。通过傅里叶变换红外光谱、x射线衍射、扫描电镜、透射电镜和能量色散x射线能谱分析对合成的ybbenps进行了表征。与原提取物相比,ybbenps具有更高的总酚含量、总黄酮含量和总抗氧化能力,表明植物代谢物增强了NP的生物活性。通过DPPH、ABTS和FRAP实验进一步验证了其抗氧化能力,显示出强大的自由基清除和还原能力。ybbenps对大肠杆菌、铜绿假单胞菌、金黄色葡萄球菌和粪肠球菌的抑菌活性测定显示出浓度依赖性,对大肠杆菌的最高抑菌带为14.5±0.4 mm。采用液相色谱-串联质谱法分析YB-E提取物的化学成分,鉴定出奎宁酸、多元醇和酚类化合物,如绿原酸(1.45 mg/g)和柚皮素(0.02 mg/g)。此外,还研究了YBFeNPs对棒曲霉素和羟甲基糠醛(HMF)这两种对食品安全构成重大威胁的有毒化合物的吸附能力。NPs对展青霉素和HMF均有较好的吸附效果,在浓度为5.0 g/L时,吸附240 min,最大吸附率分别为61.05%和46.12%。
{"title":"Green-synthesis of iron nanoparticles using wild cherry laurel (<i>Prunus laurocerasus</i> L.) fruit extract and their patulin and HMF adsorption capacities along with biological activities.","authors":"Havva Nur Kobya, Esra Gül, Ömer Karpuz, Cemalettin Baltacı","doi":"10.1080/10826068.2026.2620808","DOIUrl":"https://doi.org/10.1080/10826068.2026.2620808","url":null,"abstract":"<p><p>In this study, iron nanoparticles (YBFeNPs) were green-synthesized using the aqueous extract (YB-E) of wild cherry laurel (<i>Prunus laurocerasus</i> L.) fruit to evaluate their potential applications in food safety. The synthesized YBFeNPs were investigated through Fourier-transform infrared spectroscopy, X-ray diffraction, scanning electron microscopy, transmission electron microscopy, and energy-dispersive X-ray spectroscopy analyses. YBFeNPs showed higher total phenolic content, total flavonoid content, and total antioxidant capacity compared to the original extract, suggesting that plant metabolites enhance NP bioactivity. Antioxidant capacity was further validated by DPPH, ABTS, and FRAP assays, which demonstrated strong radical scavenging and reducing power. The antibacterial activity of YBFeNPs was assessed against <i>Escherichia coli</i>, <i>Pseudomonas aeruginosa</i>, <i>Staphylococcus aureus</i>, and <i>Enterococcus faecalis</i>, revealing concentration-dependent effects with the highest inhibition zone of 14.5 ± 0.4 mm for <i>E. coli</i>. The chemical composition of the YB-E extract was analyzed using liquid chromatography-tandem mass spectrometry, identifying quinic acid, a polyol, and phenolic compounds such as chlorogenic acid (1.45 mg/g) and naringenin (0.02 mg/g). Additionally, the adsorption capacities of YBFeNPs were investigated against patulin and hydroxymethylfurfural (HMF), toxic compounds posing significant threats to food safety. The NPs demonstrated effective adsorption of both patulin and HMF, achieving maximum adsorption rates of 61.05% and 46.12%, respectively, at a concentration of 5.0 g/L after 240 min.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-23"},"PeriodicalIF":1.9,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100473","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phytochemical profile and multi-target biological activities of Sideritis lanata water extract: antioxidant, enzyme inhibition, and anti-inflammatory potential. 黄黄豆水提取物的植物化学特征和多靶点生物活性:抗氧化、酶抑制和抗炎潜力。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-01-30 DOI: 10.1080/10826068.2026.2620806
Nilay Isitez, Sevim Feyza Erdoğmuş, Fatma Ozlem Kargin Solmaz, Cengiz Sarikurkcu, Bulent Kirkan, Bektas Tepe

Sideritis lanata ("mountain tea") is widely consumed; however, its water-extractable chemotype and associated biological activities remain underdefined. In this study, an ultrasound-assisted aqueous extract was characterized to link chemical composition with biological function. The extract exhibited a moderate phenolic load, with a total phenolic content (TPC) of 22.27 mg gallic acid equivalents per gram (GAEs/g) and a total flavonoid content (TFC) of 7.50 mg rutin equivalents per gram (REs/g). Phenolic profiling by liquid chromatography-electrospray ionization-tandem mass spectrometry (LC-ESI-MS/MS) revealed a phenolic-acid-dominated signature, mainly hydroxycinnamic acids led by chlorogenic acid (691 µg/g), followed by caffeic acid (231 µg/g), p-coumaric acid (211 µg/g), and ferulic acid (50.4 µg/g), together with abundant hydroxybenzoic acids such as 3- and 4-hydroxybenzoic acids (188 and 183 µg/g, respectively). Antioxidant activity, evaluated using six complementary assays, was moderate and assay-dependent, with stronger metal-chelating activity (IC50 = 1.31 mg/mL) and ferric reducing antioxidant power (FRAP; EC50 = 1.38 mg/mL), followed by phosphomolybdenum (EC50 = 2.03 mg/mL), and weaker cupric reducing antioxidant capacity (CUPRAC; EC50 = 3.10 mg/mL), ABTS (IC50 = 3.64 mg/mL), and DPPH (IC50 = 5.13 mg/mL). The extract inhibited acetyl- and butyrylcholinesterase and tyrosinase with comparable potency (2.69, 2.53, and 2.64 mg/mL, respectively), while weaker inhibition was observed for α-glucosidase (10.63 mg/mL) and α-amylase (19.93 mg/mL). In A549 lung carcinoma cells, viability decreased concentration-dependently; at the half-maximal inhibitory concentration (IC50), tumor necrosis factor-alpha (TNF-α) increased to 26.73 ng/mL, whereas transforming growth factor-beta (TGF-β) and interleukin-1 beta (IL-1β) decreased to 9.4 and 10.83 pg/mL, respectively, while at ½ × IC50 TNF-α was 1.3 ng/mL and TGF-β reached 46.6 pg/mL. Overall, this hydroxycinnamate- and hydroxybenzoate-rich aqueous extract exhibits moderate, target-selective antioxidant and enzyme-inhibitory activities together with dose-dependent immunomodulatory effects.

山茶(Sideritis lanata)被广泛消费;然而,其水提取的化学型和相关的生物活性仍不清楚。在这项研究中,超声辅助水提取物的特征,化学成分和生物功能联系起来。提取物具有中等的酚负荷,总酚含量(TPC)为22.27 mg没食子酸当量/g (GAEs/g),总黄酮含量(TFC)为7.50 mg芦丁当量/g (REs/g)。液相色谱-电喷雾电离-串联质谱(hplc - esi -MS/MS)的酚类分析结果显示,酚类酸为主,以绿原酸为主(691µg/g),其次是咖啡酸(231µg/g)、对香豆酸(211µg/g)和阿威酸(50.4µg/g),还有丰富的羟基苯甲酸,如3-和4-羟基苯甲酸(分别为188和183µg/g)。通过6项互补试验评估,其抗氧化活性为中等且依赖于试验,具有较强的金属螯合活性(IC50 = 1.31 mg/mL)和铁还原抗氧化能力(FRAP, EC50 = 1.38 mg/mL),其次是磷钼(EC50 = 2.03 mg/mL),较弱的铜还原抗氧化能力(CUPRAC, EC50 = 3.10 mg/mL), ABTS (IC50 = 3.64 mg/mL)和DPPH (IC50 = 5.13 mg/mL)。对乙酰胆碱酯酶、丁胆碱酯酶和酪氨酸酶的抑制作用较弱(分别为2.69、2.53和2.64 mg/mL),对α-葡萄糖苷酶(10.63 mg/mL)和α-淀粉酶(19.93 mg/mL)的抑制作用较弱。在A549肺癌细胞中,细胞活力呈浓度依赖性下降;半最大抑制浓度(IC50)时,肿瘤坏死因子α (TNF-α)升高至26.73 ng/mL,转化生长因子β (TGF-β)和白细胞介素-1β (IL-1β)分别降低至9.4和10.83 pg/mL,½× IC50时TNF-α为1.3 ng/mL, TGF-β为46.6 pg/mL。总的来说,这种富含羟基肉桂酸和羟基苯甲酸盐的水提取物具有适度的、靶向选择性的抗氧化和酶抑制活性,以及剂量依赖性的免疫调节作用。
{"title":"Phytochemical profile and multi-target biological activities of <i>Sideritis lanata</i> water extract: antioxidant, enzyme inhibition, and anti-inflammatory potential.","authors":"Nilay Isitez, Sevim Feyza Erdoğmuş, Fatma Ozlem Kargin Solmaz, Cengiz Sarikurkcu, Bulent Kirkan, Bektas Tepe","doi":"10.1080/10826068.2026.2620806","DOIUrl":"https://doi.org/10.1080/10826068.2026.2620806","url":null,"abstract":"<p><p><i>Sideritis lanata</i> (\"mountain tea\") is widely consumed; however, its water-extractable chemotype and associated biological activities remain underdefined. In this study, an ultrasound-assisted aqueous extract was characterized to link chemical composition with biological function. The extract exhibited a moderate phenolic load, with a total phenolic content (TPC) of 22.27 mg gallic acid equivalents per gram (GAEs/g) and a total flavonoid content (TFC) of 7.50 mg rutin equivalents per gram (REs/g). Phenolic profiling by liquid chromatography-electrospray ionization-tandem mass spectrometry (LC-ESI-MS/MS) revealed a phenolic-acid-dominated signature, mainly hydroxycinnamic acids led by chlorogenic acid (691 µg/g), followed by caffeic acid (231 µg/g), <i>p</i>-coumaric acid (211 µg/g), and ferulic acid (50.4 µg/g), together with abundant hydroxybenzoic acids such as 3- and 4-hydroxybenzoic acids (188 and 183 µg/g, respectively). Antioxidant activity, evaluated using six complementary assays, was moderate and assay-dependent, with stronger metal-chelating activity (IC<sub>50</sub> = 1.31 mg/mL) and ferric reducing antioxidant power (FRAP; EC<sub>50</sub> = 1.38 mg/mL), followed by phosphomolybdenum (EC<sub>50</sub> = 2.03 mg/mL), and weaker cupric reducing antioxidant capacity (CUPRAC; EC<sub>50</sub> = 3.10 mg/mL), ABTS (IC<sub>50</sub> = 3.64 mg/mL), and DPPH (IC<sub>50</sub> = 5.13 mg/mL). The extract inhibited acetyl- and butyrylcholinesterase and tyrosinase with comparable potency (2.69, 2.53, and 2.64 mg/mL, respectively), while weaker inhibition was observed for α-glucosidase (10.63 mg/mL) and α-amylase (19.93 mg/mL). In A549 lung carcinoma cells, viability decreased concentration-dependently; at the half-maximal inhibitory concentration (IC<sub>50</sub>), tumor necrosis factor-alpha (TNF-α) increased to 26.73 ng/mL, whereas transforming growth factor-beta (TGF-β) and interleukin-1 beta (IL-1β) decreased to 9.4 and 10.83 pg/mL, respectively, while at ½ × IC<sub>50</sub> TNF-α was 1.3 ng/mL and TGF-β reached 46.6 pg/mL. Overall, this hydroxycinnamate- and hydroxybenzoate-rich aqueous extract exhibits moderate, target-selective antioxidant and enzyme-inhibitory activities together with dose-dependent immunomodulatory effects.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-8"},"PeriodicalIF":1.9,"publicationDate":"2026-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146086749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rapid alcoholic fermentation of Candida glycerinogenes under aerobic conditions. 有氧条件下产甘油假丝酵母的快速酒精发酵。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-01-30 DOI: 10.1080/10826068.2026.2620805
Mengying Wang, Xinke Wang, Dongqi Jiang, Hong Zong, Bin Zhuge

The toxicity of lignocellulosic hydrolysate has long plagued the alcoholic fermentation industry, whereas elevating dissolved oxygen concentrations can effectively enhance microbial tolerance and fermentation efficiency. This study further elucidates the rapid sugar metabolism mechanism of Candida glycerinogenes under aerobic conditions by examining its carbon flux allocation and sugar metabolic rates. C. glycerinogenes has an excellent performance on glycolytic rate and ethanol productivity compared to Saccharomyces cerevisiae under aerobic conditions. Unlike S. cerevisiae W303, C. glycerinogenes had an increasing NADH/NAD+ ratio and maintained high activities of glycolytic enzymes at high ATP levels. The maximum inhibitory effect of ATP on the relative activities of hexokinase (HXK), phosphofructose kinase (PFK), and pyruvate kinase (PYK) in S. cerevisiae W303 was 2.69, 1.35, and 1.41 fold that of C. glycerinogenes, respectively. Overexpression of PFK1 from C. glycerinogenes in S. cerevisiae W303 could increase the glycolytic rate, increasing the maximum glucose consumption rate by 14.48%. The high activities of glycolytic enzymes and their insensitivity to ATP inhibition may be key and prerequisite factors for the rapid fermentation of C. glycerinogenes. These results help understand the rapid fermentation from the perspectives of NAD(H) and ATP regulation, and provide new insights into the production of ethanol and other glycolytic products.

木质纤维素水解物的毒性一直困扰着酒精发酵工业,而提高溶解氧浓度可以有效地提高微生物的耐受性和发酵效率。本研究通过对产甘油假丝酵母碳通量分配和糖代谢率的检测,进一步阐明了产甘油假丝酵母在有氧条件下的快速糖代谢机制。在有氧条件下,与酿酒酵母相比,产甘油原菌在糖酵解率和乙醇产量方面表现优异。与酿酒酵母W303不同,产甘油C.在高ATP水平下,NADH/NAD+比值升高,糖酵解酶活性保持较高。ATP对酿酒酵母W303中己糖激酶(HXK)、磷酸果糖激酶(PFK)和丙酮酸激酶(PYK)相对活性的最大抑制作用分别是产甘油酵母的2.69倍、1.35倍和1.41倍。产甘油原C. PFK1在酿酒酵母W303中的过表达可提高糖酵解速率,使最大葡萄糖消耗速率提高14.48%。糖酵解酶的高活性和对ATP抑制的不敏感可能是产甘油原菌快速发酵的关键和前提因素。这些结果有助于从NAD(H)和ATP调控的角度了解快速发酵过程,并为乙醇和其他糖酵解产物的生产提供新的见解。
{"title":"Rapid alcoholic fermentation of <i>Candida glycerinogenes</i> under aerobic conditions.","authors":"Mengying Wang, Xinke Wang, Dongqi Jiang, Hong Zong, Bin Zhuge","doi":"10.1080/10826068.2026.2620805","DOIUrl":"https://doi.org/10.1080/10826068.2026.2620805","url":null,"abstract":"<p><p>The toxicity of lignocellulosic hydrolysate has long plagued the alcoholic fermentation industry, whereas elevating dissolved oxygen concentrations can effectively enhance microbial tolerance and fermentation efficiency. This study further elucidates the rapid sugar metabolism mechanism of <i>Candida glycerinogenes</i> under aerobic conditions by examining its carbon flux allocation and sugar metabolic rates. <i>C. glycerinogenes</i> has an excellent performance on glycolytic rate and ethanol productivity compared to <i>Saccharomyces cerevisiae</i> under aerobic conditions. Unlike <i>S. cerevisiae</i> W303<i>, C. glycerinogenes</i> had an increasing NADH/NAD<sup>+</sup> ratio and maintained high activities of glycolytic enzymes at high ATP levels. The maximum inhibitory effect of ATP on the relative activities of hexokinase (HXK), phosphofructose kinase (PFK), and pyruvate kinase (PYK) in <i>S. cerevisiae</i> W303 was 2.69, 1.35, and 1.41 fold that of <i>C. glycerinogenes</i>, respectively. Overexpression of <i>PFK1</i> from <i>C. glycerinogenes</i> in <i>S. cerevisiae</i> W303 could increase the glycolytic rate, increasing the maximum glucose consumption rate by 14.48%. The high activities of glycolytic enzymes and their insensitivity to ATP inhibition may be key and prerequisite factors for the rapid fermentation of <i>C. glycerinogenes</i>. These results help understand the rapid fermentation from the perspectives of NAD(H) and ATP regulation, and provide new insights into the production of ethanol and other glycolytic products.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-10"},"PeriodicalIF":1.9,"publicationDate":"2026-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146093863","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Deciphering the interactions of phytochemicals with alcohol dehydrogenase 1 (ADH1) in Saccharomyces cerevisiae: a molecular simulations study. 解读酿酒酵母中植物化学物质与酒精脱氢酶1 (ADH1)的相互作用:一项分子模拟研究。
IF 1.9 4区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Pub Date : 2026-01-29 DOI: 10.1080/10826068.2026.2620807
Umesh, Vijayanand Suryakant Moholkar

The present study has investigated the interactions of the phytochemicals present in sugarcane bagasse (SCB) with alcohol dehydrogenase (ADH1) enzyme in Saccharomyces cerevisiae using molecular simulations. ADH1 catalyzes the reduction of acetaldehyde to ethanol. The metabolic hindrance induced by phytochemicals can adversely affect kinetics and yield of ethanol fermentation. The phytochemicals in SCB biomass were detected using LC-ESI-MS/QTOF analysis after dilute acid/alkali pretreatment and extraction using methanol and acetonitrile. Molecular docking simulation revealed high binding affinity of four phytochemicals for ADH1 enzyme due to low binding energies and inhibition constants: chlorogenic acid (-8.64 kcal/mol, 0.464 μM), apigenin (-7.72 kcal/mol, 2.2 μM), diosmetin (-7.47 kcal/mol, 3.37 μM), and caffeic acid (-7.03 kcal/mol, 7.07 μM). The molecular dynamics simulations showed that root mean square deviation (RMSD) values of the complexes of chlorogenic acid (0.22 nm) and apigenin (0.27 nm) were significantly smaller than apoprotein (0.37 nm), which indicates their stability. The root mean square fluctuation (RMSF) value of active site residues of the phytochemical complexes (chlorogenic acid = 0.15 nm, apigenin = 0.13 nm) was also smaller than that of apoprotein (0.17 nm). These results clearly indicate that phytochemicals can hinder metabolic pathway of S. cerevisiae due to preferential binding to ADH1.

本研究采用分子模拟的方法研究了甘蔗渣(SCB)中植物化学物质与酿酒酵母(Saccharomyces cerevisiae)中醇脱氢酶(ADH1)酶的相互作用。ADH1催化乙醛还原为乙醇。植物化学物质引起的代谢障碍会影响乙醇发酵的动力学和产量。采用LC-ESI-MS/QTOF分析方法,经稀酸/碱预处理,甲醇和乙腈萃取后,测定了SCB生物质中的植物化学物质。分子对接模拟结果显示,绿原酸(-8.64 kcal/mol, 0.464 μM)、芹菜素(-7.72 kcal/mol, 2.2 μM)、硅油素(-7.47 kcal/mol, 3.37 μM)和咖啡酸(-7.03 kcal/mol, 7.07 μM) 4种植物化学物质对ADH1酶具有较低的结合能和抑制常数,具有较高的结合亲和力。分子动力学模拟结果表明,绿原酸(0.22 nm)与芹菜素(0.27 nm)配合物的均方根偏差(RMSD)值显著小于载脂蛋白(0.37 nm),表明它们的稳定性。植物化学复合物(绿原酸= 0.15 nm,芹菜素= 0.13 nm)活性位点残基的均方根波动(RMSF)值也小于载子蛋白(0.17 nm)。这些结果清楚地表明,植物化学物质可能通过优先结合ADH1而阻碍酿酒酵母的代谢途径。
{"title":"Deciphering the interactions of phytochemicals with alcohol dehydrogenase 1 (ADH1) in <i>Saccharomyces cerevisiae</i>: a molecular simulations study.","authors":"Umesh, Vijayanand Suryakant Moholkar","doi":"10.1080/10826068.2026.2620807","DOIUrl":"https://doi.org/10.1080/10826068.2026.2620807","url":null,"abstract":"<p><p>The present study has investigated the interactions of the phytochemicals present in sugarcane bagasse (SCB) with alcohol dehydrogenase (ADH1) enzyme in <i>Saccharomyces cerevisiae</i> using molecular simulations. ADH1 catalyzes the reduction of acetaldehyde to ethanol. The metabolic hindrance induced by phytochemicals can adversely affect kinetics and yield of ethanol fermentation. The phytochemicals in SCB biomass were detected using LC-ESI-MS/QTOF analysis after dilute acid/alkali pretreatment and extraction using methanol and acetonitrile. Molecular docking simulation revealed high binding affinity of four phytochemicals for ADH1 enzyme due to low binding energies and inhibition constants: chlorogenic acid (-8.64 kcal/mol, 0.464 μM), apigenin (-7.72 kcal/mol, 2.2 μM), diosmetin (-7.47 kcal/mol, 3.37 μM), and caffeic acid (-7.03 kcal/mol, 7.07 μM). The molecular dynamics simulations showed that root mean square deviation (RMSD) values of the complexes of chlorogenic acid (0.22 nm) and apigenin (0.27 nm) were significantly smaller than apoprotein (0.37 nm), which indicates their stability. The root mean square fluctuation (RMSF) value of active site residues of the phytochemical complexes (chlorogenic acid = 0.15 nm, apigenin = 0.13 nm) was also smaller than that of apoprotein (0.17 nm). These results clearly indicate that phytochemicals can hinder metabolic pathway of <i>S. cerevisiae</i> due to preferential binding to ADH1.</p>","PeriodicalId":20401,"journal":{"name":"Preparative Biochemistry & Biotechnology","volume":" ","pages":"1-10"},"PeriodicalIF":1.9,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146086767","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Preparative Biochemistry & Biotechnology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1