Phytohormones play crucial roles in fruit development and ripening. However, it is unclear the role of phytohormones in pear fruit quality, such as transverse and longitudinal diameters, fruit weight, soluble solid, titratable acid. In this study, four phytohormone treatments which included gibberellin (GA), Indole-3-acetic acid (IAA), abscisic acid (ABA), and ethylene (ETH) were performed to treat pear (Pyrus pyrifolia) fruit at different stages, including 30, 45, 60, 75 and 90 days after flower blooming (DAFB). As a result, exogenous GA treatment could promote fruit enlargement, reduce fruit firmness and inhibit the accumulation of titratable acid in ripening fruit (110DAFB). Both exogenous IAA and ABA treatments could also promote fruit enlargement. Moreover, both exogenous ABA and ETH treatment could promote the accumulation of soluble solids in 110DAFB, indicating the involvement of ABA and ETH in fruit ripening. Quantitative real-time PCR (qRT-PCR) analysis suggested that PbZEP1, PbNCED.B, PbSDR4 and PbAO3 are the crucial genes for ABA biosynthesis, PbACS1b and PbACO1 are crucial genes for ethylene biosynthesis in pear fruit. EMSA and Dual-luciferase assay suggested that PbABF.B and PbABF.C.2 directly bind to the promoter of PbACS1b, while PbABF.E.1 and PbABF.E.2 directly bind to the promoter of PbACO1 to enhance their activities. These results indicate that the four ABF proteins may be involved in ethylene biosynthesis during fruit ripening. Our study establishes the roles of GA, IAA, ABA and ethylene in pear fruit and finds the crosstalk between ABA and ETH during fruit ripening.
植物激素在果实发育和成熟过程中起着至关重要的作用。然而,植物激素对梨果实品质(如横径、纵径、果重、可溶性固形物、可滴定酸等)的影响尚不清楚。本研究采用赤霉素(GA)、吲哚-3-乙酸(IAA)、脱落酸(ABA)和乙烯(ETH)四种植物激素处理梨(Pyrus pyrifolia)果实的不同阶段,包括花后 30、45、60、75 和 90 天(DAFB)。结果表明,外源 GA 可促进果实增大,降低果实硬度,抑制成熟果实(110DAFB)中可滴定酸的积累。外源 IAA 和 ABA 处理也能促进果实增大。此外,外源 ABA 和 ETH 处理都能促进 110DAFB 中可溶性固形物的积累,表明 ABA 和 ETH 参与了果实成熟。实时定量 PCR(qRT-PCR)分析表明,PbZEP1、PbNCED.B、PbSDR4 和 PbAO3 是梨果中 ABA 生物合成的关键基因,PbACS1b 和 PbACO1 是乙烯生物合成的关键基因。EMSA和双荧光素酶分析表明,PbABF.B和PbABF.C.2直接与PbACS1b的启动子结合,而PbABF.E.1和PbABF.E.2直接与PbACO1的启动子结合,从而增强了它们的活性。这些结果表明,这四种 ABF 蛋白可能参与了果实成熟过程中的乙烯生物合成。我们的研究确定了 GA、IAA、ABA 和乙烯在梨果实中的作用,并发现了 ABA 和 ETH 在果实成熟过程中的相互影响。
{"title":"Effects of exogenous GA, IAA, ABA and ethylene on pear (Pyrus pyrifolia) fruit during different development stages","authors":"Zhi-Hua Guo, Hong Liu, Si-Qi Zheng, Xue-Ping Wang, Zhi-Hua Xie, Zheng-Mao Zhang, Jing-Rong Liu, Ji-Mei Li, Shao-Yan Lin, Chao Gu, Shao-Ling Zhang","doi":"10.1007/s10725-024-01182-6","DOIUrl":"https://doi.org/10.1007/s10725-024-01182-6","url":null,"abstract":"<p>Phytohormones play crucial roles in fruit development and ripening. However, it is unclear the role of phytohormones in pear fruit quality, such as transverse and longitudinal diameters, fruit weight, soluble solid, titratable acid. In this study, four phytohormone treatments which included gibberellin (GA), Indole-3-acetic acid (IAA), abscisic acid (ABA), and ethylene (ETH) were performed to treat pear (<i>Pyrus pyrifolia</i>) fruit at different stages, including 30, 45, 60, 75 and 90 days after flower blooming (DAFB). As a result, exogenous GA treatment could promote fruit enlargement, reduce fruit firmness and inhibit the accumulation of titratable acid in ripening fruit (110DAFB). Both exogenous IAA and ABA treatments could also promote fruit enlargement. Moreover, both exogenous ABA and ETH treatment could promote the accumulation of soluble solids in 110DAFB, indicating the involvement of ABA and ETH in fruit ripening. Quantitative real-time PCR (qRT-PCR) analysis suggested that <i>PbZEP1</i>, <i>PbNCED.B</i>, <i>PbSDR4</i> and <i>PbAO3</i> are the crucial genes for ABA biosynthesis, <i>PbACS1b</i> and <i>PbACO1</i> are crucial genes for ethylene biosynthesis in pear fruit. EMSA and Dual-luciferase assay suggested that PbABF.B and PbABF.C.2 directly bind to the promoter of <i>PbACS1b</i>, while PbABF.E.1 and PbABF.E.2 directly bind to the promoter of <i>PbACO1</i> to enhance their activities. These results indicate that the four ABF proteins may be involved in ethylene biosynthesis during fruit ripening. Our study establishes the roles of GA, IAA, ABA and ethylene in pear fruit and finds the crosstalk between ABA and ETH during fruit ripening.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"34 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-07-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141572810","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-08DOI: 10.1007/s10725-024-01179-1
Ke Fu, Yiting Chen, Yijing Wang, Xueliang Chen, Qiqi Gong, Yan Shi, Cong Li, Jinping Si, Donghong Chen, Zhigang Han
Main conclusion Freezing-tolerant Dendrobium catenatum cultivar responds to freezing stress by activating antioxidant enzyme systems and non-enzymatic systems including AsA and flavonoid biosynthetic pathways. Dendrobium catenatum (also named Dendrobium officinale) is a rare traditional Chinese medicinal plant, and has developed into 10 billion-grade industry by artificial breeding. Freezing stress is a devastating abiotic stress that hinders the growth and yield of D. catenatum. However, the cold response molecular mechanisms of D. catenatum are nearly unknown. Here, multi-omics including metabolomics, transcriptomics, and proteomics analyses were conducted under − 9 °C freezing stress using two varieties of D. catenatum, namely freezing-tolerant Jingpin Tianmushan (TMS) and freezing-sensitive Jingpin 6A2B (6A2B). TMS had significantly high levels of antioxidant enzymes including CAT, SOD, APX, and MDHAR, as well as high contents of the metabolites including quercetin, rutin, galacturonic acid, and ascorbic acid (AsA), compared to 6A2B. Rutin and AsA contents were positively related to the expression levels of the hub genes, including Dc4CL4/DcF3’H3 and DcGalUR1/DcGalUR2/DcGGP2/DcL-GalDH, which associate with freezing-responsive regulators comprising AP2/ERF, ARF, bHLH, bZIP, MYB, and ZF-HD members by co-expression network analysis. These results provide insights into the underlying freezing-tolerant molecular mechanism and promote freezing-resistant breeding of D. catenatum.
{"title":"Multi-omics reveal the regulation mechanism in response to freezing tolerance in Dendrobium catenatum","authors":"Ke Fu, Yiting Chen, Yijing Wang, Xueliang Chen, Qiqi Gong, Yan Shi, Cong Li, Jinping Si, Donghong Chen, Zhigang Han","doi":"10.1007/s10725-024-01179-1","DOIUrl":"https://doi.org/10.1007/s10725-024-01179-1","url":null,"abstract":"<p><i>Main conclusion</i> Freezing-tolerant <i>Dendrobium catenatum</i> cultivar responds to freezing stress by activating antioxidant enzyme systems and non-enzymatic systems including AsA and flavonoid biosynthetic pathways. <i>Dendrobium catenatum</i> (also named <i>Dendrobium officinale</i>) is a rare traditional Chinese medicinal plant, and has developed into 10 billion-grade industry by artificial breeding. Freezing stress is a devastating abiotic stress that hinders the growth and yield of <i>D. catenatum</i>. However, the cold response molecular mechanisms of <i>D. catenatum</i> are nearly unknown. Here, multi-omics including metabolomics, transcriptomics, and proteomics analyses were conducted under − 9 °C freezing stress using two varieties of <i>D. catenatum</i>, namely freezing-tolerant Jingpin Tianmushan (TMS) and freezing-sensitive Jingpin 6A2B (6A2B). TMS had significantly high levels of antioxidant enzymes including CAT, SOD, APX, and MDHAR, as well as high contents of the metabolites including quercetin, rutin, galacturonic acid, and ascorbic acid (AsA), compared to 6A2B. Rutin and AsA contents were positively related to the expression levels of the hub genes, including <i>Dc4CL4</i>/<i>DcF3’H3</i> and <i>DcGalUR1</i>/<i>DcGalUR2</i>/<i>DcGGP2</i>/<i>DcL-GalDH</i>, which associate with freezing-responsive regulators comprising AP2/ERF, ARF, bHLH, bZIP, MYB, and ZF-HD members by co-expression network analysis. These results provide insights into the underlying freezing-tolerant molecular mechanism and promote freezing-resistant breeding of <i>D. catenatum</i>.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"367 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-07-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141572808","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-08DOI: 10.1007/s10725-024-01172-8
Aliya Ayaz, Chunmei Hu, Ying Li
This opinion article offers a comprehensive analysis of recent developments in the exploration of endoplasmic reticulum (ER) stress signaling pathways and future opportunities for chemical mitigation strategies in plants. Encouraging results have been observed in the mitigation of ER stress in plants through the use of various chemical compounds commonly referred to as chemical chaperones; however, their mechanisms still require further exploration. The interconnectedness of stress responses is evident in the cross-talk between ER stress signaling and other stress signaling pathways. Additionally, the investigation of the role of ER stress signaling in plant defense and immunity has highlighted its significance in enhancing plant resistance. Looking ahead, future studies focusing on chemical mitigation of ER stress are positioned to provide valuable insights that can significantly expand our existing knowledge base. These advancements hold immense potential for enriching our understanding of ER stress signaling and facilitating the development of effective stress mitigation strategies in plants.
这篇观点性文章全面分析了植物内质网(ER)应激信号通路探索的最新进展以及化学缓解策略的未来机遇。通过使用通常被称为化学伴侣的各种化合物来缓解植物ER胁迫,已经取得了令人鼓舞的成果;然而,其机制仍需进一步探索。逆转录酶胁迫信号传导与其他胁迫信号传导途径之间的相互联系是显而易见的。此外,对ER胁迫信号在植物防御和免疫中作用的研究也凸显了其在增强植物抗性方面的重要意义。展望未来,以化学缓解 ER 胁迫为重点的未来研究将提供有价值的见解,极大地扩展我们现有的知识库。这些进展蕴含着巨大的潜力,可以丰富我们对 ER 胁迫信号的理解,并促进有效的植物胁迫缓解策略的开发。
{"title":"Current advances and future prospects of ER stress signaling and its chemical mitigation in plants","authors":"Aliya Ayaz, Chunmei Hu, Ying Li","doi":"10.1007/s10725-024-01172-8","DOIUrl":"https://doi.org/10.1007/s10725-024-01172-8","url":null,"abstract":"<p>This opinion article offers a comprehensive analysis of recent developments in the exploration of endoplasmic reticulum (ER) stress signaling pathways and future opportunities for chemical mitigation strategies in plants. Encouraging results have been observed in the mitigation of ER stress in plants through the use of various chemical compounds commonly referred to as chemical chaperones; however, their mechanisms still require further exploration. The interconnectedness of stress responses is evident in the cross-talk between ER stress signaling and other stress signaling pathways. Additionally, the investigation of the role of ER stress signaling in plant defense and immunity has highlighted its significance in enhancing plant resistance. Looking ahead, future studies focusing on chemical mitigation of ER stress are positioned to provide valuable insights that can significantly expand our existing knowledge base. These advancements hold immense potential for enriching our understanding of ER stress signaling and facilitating the development of effective stress mitigation strategies in plants.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"30 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-07-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141572812","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-04DOI: 10.1007/s10725-024-01186-2
Artem P. Gureev, Vera A. Kryukova, Anna A. Eremina, Alina A. Alimova, Marina. S. Kirillova, Olesya A. Filatova, Marina I. Moskvitina, Stanislav V. Kozin, Oxana M. Lyasota, Maria V. Gureeva
Currently, in agriculture, there is a tendency towards the partial replacement of chemical pesticides with microbiological plant protection products. In this work, we tested the ability of plant-growth promoting bacteria from the genus Azospirillum to reduce the negative effects of high concentrations of six different pesticides on wheat characteristics. Of the seven Azospirillum strains studied, five showed high resistance to at least one pesticide, and Niveispirillum irakense (formerly classified as Azospirillum until 2014) was one of the most resistant strains to all pesticides. In most cases, catalase activity increased in resistant strains in the presence of pesticides. Furthermore, we demonstrated that some of the most resistant Azospirillum strains (including N. irakense, A. brasilense, A. picis, A. thiophilum, and A. baldaniorum) can counteract pesticide-induced growth inhibition, suppress oxidative stress, as evidenced by a decrease in iron-induced chemiluminescence and the amount of oxidative damage to wheat seedling mtDNA in a pot experiment. However, the bacteria had no positive effect on the chlorophyll content of wheat seedlings. Azospirilla were found in the rhizosphere of wheat roots 3 months after a wheat planting in the field experiment. Pesticides led to a slight decrease in their quantity in the rhizosphere. Additionally, bacterial inoculation mitigated the pesticide-induced decrease in wheat biomass.
{"title":"Plant-growth promoting rhizobacteria Azospirillum partially alleviate pesticide-induced growth retardation and oxidative stress in wheat (Triticum aestivum L.)","authors":"Artem P. Gureev, Vera A. Kryukova, Anna A. Eremina, Alina A. Alimova, Marina. S. Kirillova, Olesya A. Filatova, Marina I. Moskvitina, Stanislav V. Kozin, Oxana M. Lyasota, Maria V. Gureeva","doi":"10.1007/s10725-024-01186-2","DOIUrl":"https://doi.org/10.1007/s10725-024-01186-2","url":null,"abstract":"<p>Currently, in agriculture, there is a tendency towards the partial replacement of chemical pesticides with microbiological plant protection products. In this work, we tested the ability of plant-growth promoting bacteria from the genus <i>Azospirillum</i> to reduce the negative effects of high concentrations of six different pesticides on wheat characteristics. Of the seven <i>Azospirillum</i> strains studied, five showed high resistance to at least one pesticide, and <i>Niveispirillum irakense</i> (formerly classified as <i>Azospirillum</i> until 2014) was one of the most resistant strains to all pesticides. In most cases, catalase activity increased in resistant strains in the presence of pesticides. Furthermore, we demonstrated that some of the most resistant <i>Azospirillum</i> strains (including <i>N. irakense, A. brasilense, A. picis, A. thiophilum,</i> and <i>A. baldaniorum</i>) can counteract pesticide-induced growth inhibition, suppress oxidative stress, as evidenced by a decrease in iron-induced chemiluminescence and the amount of oxidative damage to wheat seedling mtDNA in a pot experiment. However, the bacteria had no positive effect on the chlorophyll content of wheat seedlings. <i>Azospirilla</i> were found in the rhizosphere of wheat roots 3 months after a wheat planting in the field experiment. Pesticides led to a slight decrease in their quantity in the rhizosphere. Additionally, bacterial inoculation mitigated the pesticide-induced decrease in wheat biomass.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"9 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141551545","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-02DOI: 10.1007/s10725-024-01177-3
Nasir Iqbal, Yi Zhou, Matthew D. Denton, Victor O. Sadras
Chickpea (Cicer arietinum) establishes symbiotic relationships with several Mesorhizobium species and the three-way interaction between chickpea variety, Mesorhizobium strain, and environment, drives plant growth and nitrogen fixation. Here we quantified the phenotypic plasticity for shoot dry weight, nodule dry weight, nodules per plant, nodule colour, symbiotic effectiveness, and nitrogen cost in a factorial experiment combining five chickpea varieties, seven Mesorhizobium strains and three photothermal regimes. Plant growth and nitrogen fixation traits varied with variety, Mesorhizobium strain, photothermal environment and their interaction. Phenotypic plasticity was larger for nodules per plant (7.3-fold) than for shoot dry weight (2.7-fold), verifying a hierarchy of plasticities between these traits. Strain-driven plasticity of plant growth and nitrogen fixation traits was larger than variety-driven plasticity for our combination of varieties, strains, and photothermal environments, with strain-driven phenotypic plasticity being 2.7-fold vs 1.4-fold for shoot dry matter, 2.5-fold vs 1.7-fold for nodule dry weight, 7.3-fold vs 2.1-fold for nodules per plant, 3.7-fold vs 1.7-fold for nodule color, 2.9-fold vs 1.6-fold for symbiotic effectiveness, and 2.3-fold vs 1.6-fold for nitrogen cost. Our study provides insights on the phenotypic plasticity of the legume-rhizobia interaction by considering the plants as part of the rhizobia environment and vice-versa.
{"title":"Mesorhizobia strain and chickpea variety drive phenotypic plasticity of plant growth and nodulation","authors":"Nasir Iqbal, Yi Zhou, Matthew D. Denton, Victor O. Sadras","doi":"10.1007/s10725-024-01177-3","DOIUrl":"https://doi.org/10.1007/s10725-024-01177-3","url":null,"abstract":"<p>Chickpea (<i>Cicer arietinum</i>) establishes symbiotic relationships with several <i>Mesorhizobium</i> species and the three-way interaction between chickpea variety, M<i>esorhizobium</i> strain, and environment, drives plant growth and nitrogen fixation. Here we quantified the phenotypic plasticity for shoot dry weight, nodule dry weight, nodules per plant, nodule colour, symbiotic effectiveness, and nitrogen cost in a factorial experiment combining five chickpea varieties, seven <i>Mesorhizobium</i> strains and three photothermal regimes. Plant growth and nitrogen fixation traits varied with variety, <i>Mesorhizobium</i> strain, photothermal environment and their interaction. Phenotypic plasticity was larger for nodules per plant (7.3-fold) than for shoot dry weight (2.7-fold), verifying a hierarchy of plasticities between these traits. Strain-driven plasticity of plant growth and nitrogen fixation traits was larger than variety-driven plasticity for our combination of varieties, strains, and photothermal environments, with strain-driven phenotypic plasticity being 2.7-fold vs 1.4-fold for shoot dry matter, 2.5-fold vs 1.7-fold for nodule dry weight, 7.3-fold vs 2.1-fold for nodules per plant, 3.7-fold vs 1.7-fold for nodule color, 2.9-fold vs 1.6-fold for symbiotic effectiveness, and 2.3-fold vs 1.6-fold for nitrogen cost. Our study provides insights on the phenotypic plasticity of the legume-rhizobia interaction by considering the plants as part of the rhizobia environment and vice-versa.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"16 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-07-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141522094","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-01DOI: 10.1007/s10725-024-01176-4
Tao Tong, Yanli Zhang, Xueyi Zhou, Wei Jiang, Guang Chen, Fanrong Zeng, Dawei Xue, Zhong-Hua Chen, Yuan Qin, Fenglin Deng
The loss of crop productivity due to soil salinity is an increasing threat to agriculture worldwide. Calcium (Ca2+) plays vital roles in salt-responsive signaling through the perception of various calcium-binding proteins, such as Ca2+-dependent lipid-binding proteins (CaLBs). Here, CaLBs from barley (Hordeum vulgare), a moderate salt-tolerant crop, and other green plants were selected for evolutionary and bioinformatics analysis. The emergence of the CaLB1 and C2 domains could be traced back to green algae, such as the chlorophyte alga Uronema belka (Uronemataceae). The physiological roles of HvCaLB1 in the salt-tolerant barley accession CM72 were investigated through gene silencing induced by barley stripe mosaic virus. Knockdown of HvCaLB1 significantly and differentially impaired the performance of plant growth, photosynthetic, and chlorophyll fluorescence parameters under the treatments of 200 and 400 mM NaCl. Moreover, the knockdown of HvCaLB1 disrupted the homeostasis of essential elements, particularly in the significant decrease of root potassium (K+) and Ca2+ contents in HvCaLB1 silencing plants compared to the control plants in response to salt stress. Significantly increased accumulation of reactive oxygen species (ROS), reduced cytosolic Ca2+ levels, as well as the decreased expression of HvHVP10 (Vacuolar H+-pyrophosphatase 10) and HvCaM1 (Calmodulin 1), were observed in the roots of the HvCaLB1-silencing plants subjected to 400 mM NaCl treatment compared to those of control plants. Taken together, CaLBs represent an ancient group of Ca2+-binding domain-containing proteins, and HvCaLB1 regulates NaCl-induced ion, ROS homeostasis, and gene expression in barley roots, demonstrating the potential application of CaLBs for crop improvement with increased tolerance to salt stress.
{"title":"Molecular and physiological evidence of HvCaLB1 regulates calcium homeostasis and salt tolerance in Barley","authors":"Tao Tong, Yanli Zhang, Xueyi Zhou, Wei Jiang, Guang Chen, Fanrong Zeng, Dawei Xue, Zhong-Hua Chen, Yuan Qin, Fenglin Deng","doi":"10.1007/s10725-024-01176-4","DOIUrl":"https://doi.org/10.1007/s10725-024-01176-4","url":null,"abstract":"<p>The loss of crop productivity due to soil salinity is an increasing threat to agriculture worldwide. Calcium (Ca<sup>2+</sup>) plays vital roles in salt-responsive signaling through the perception of various calcium-binding proteins, such as Ca<sup>2+</sup>-dependent lipid-binding proteins (CaLBs). Here, CaLBs from barley (<i>Hordeum vulgare</i>), a moderate salt-tolerant crop, and other green plants were selected for evolutionary and bioinformatics analysis. The emergence of the CaLB1 and C2 domains could be traced back to green algae, such as the chlorophyte alga <i>Uronema belka</i> (Uronemataceae). The physiological roles of HvCaLB1 in the salt-tolerant barley accession CM72 were investigated through gene silencing induced by barley stripe mosaic virus. Knockdown of <i>HvCaLB1</i> significantly and differentially impaired the performance of plant growth, photosynthetic, and chlorophyll fluorescence parameters under the treatments of 200 and 400 mM NaCl. Moreover, the knockdown of <i>HvCaLB1</i> disrupted the homeostasis of essential elements, particularly in the significant decrease of root potassium (K<sup>+</sup>) and Ca<sup>2+</sup> contents in <i>HvCaLB1</i> silencing plants compared to the control plants in response to salt stress. Significantly increased accumulation of reactive oxygen species (ROS), reduced cytosolic Ca<sup>2+</sup> levels, as well as the decreased expression of <i>HvHVP10</i> (<i>Vacuolar H</i><sup><i>+</i></sup><i>-pyrophosphatase 10</i>) and <i>HvCaM1</i> (<i>Calmodulin 1</i>), were observed in the roots of the <i>HvCaLB1</i>-silencing plants subjected to 400 mM NaCl treatment compared to those of control plants. Taken together, CaLBs represent an ancient group of Ca<sup>2+</sup>-binding domain-containing proteins, and HvCaLB1 regulates NaCl-induced ion, ROS homeostasis, and gene expression in barley roots, demonstrating the potential application of CaLBs for crop improvement with increased tolerance to salt stress.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"21 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141502773","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-01DOI: 10.1007/s10725-024-01178-2
He Guoxin, Li Sujuan, Wang Jian, Li Yanjun, Tao Xiaoyuan, Ye Zihong, Chen Guang, Xu Shengchun
Nitrogen is a critical macro-nutrient for growth and development of soybeans (Glycine max L.). Improving nitrogen use efficiency and developing low nitrogen tolerance varieties are important approaches to mitigate excessive fertilization and maximize production benefits. Precise identification of low nitrogen tolerance germplasms serves as a crucial bridge for converting germplasm advantages into breeding advantages. In this study, we optimized a precise evaluation method for low-nitrogen tolerance in soybean seedlings based on Extreme Gradient Boosting (XGBoost) algorithm. Three hundred soybean germplasms were assessed for low-nitrogen tolerance under hydroponic conditions with normal (7.5 mM) and low (0.75 mM) nitrogen levels. Fourteen physiological traits related to low nitrogen tolerance, such as biomass, chlorophyll fluorescence, were measured. The XGBoost-based evaluation method was compared to a traditional fuzzy membership function comprehensive evaluation method for accuracy and applicability. Results showed that the XGBoost-based method ensured precision and reduced the number of determined physiological indicators compared to traditional methods. Furthermore, this approach reduces the number of traits required for precise identification, which reduces time and improves economic benefits. Consequently, the screening efficiency of soybean low nitrogen tolerance germplasms is improved, offering valuable insights for soybean breeding programs.
{"title":"Optimization of evaluation method for low nitrogen tolerance in soybean germplasm seedlings","authors":"He Guoxin, Li Sujuan, Wang Jian, Li Yanjun, Tao Xiaoyuan, Ye Zihong, Chen Guang, Xu Shengchun","doi":"10.1007/s10725-024-01178-2","DOIUrl":"https://doi.org/10.1007/s10725-024-01178-2","url":null,"abstract":"<p>Nitrogen is a critical macro-nutrient for growth and development of soybeans (<i>Glycine max</i> L.). Improving nitrogen use efficiency and developing low nitrogen tolerance varieties are important approaches to mitigate excessive fertilization and maximize production benefits. Precise identification of low nitrogen tolerance germplasms serves as a crucial bridge for converting germplasm advantages into breeding advantages. In this study, we optimized a precise evaluation method for low-nitrogen tolerance in soybean seedlings based on Extreme Gradient Boosting (XGBoost) algorithm. Three hundred soybean germplasms were assessed for low-nitrogen tolerance under hydroponic conditions with normal (7.5 mM) and low (0.75 mM) nitrogen levels. Fourteen physiological traits related to low nitrogen tolerance, such as biomass, chlorophyll fluorescence, were measured. The XGBoost-based evaluation method was compared to a traditional fuzzy membership function comprehensive evaluation method for accuracy and applicability. Results showed that the XGBoost-based method ensured precision and reduced the number of determined physiological indicators compared to traditional methods. Furthermore, this approach reduces the number of traits required for precise identification, which reduces time and improves economic benefits. Consequently, the screening efficiency of soybean low nitrogen tolerance germplasms is improved, offering valuable insights for soybean breeding programs.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"96 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141522095","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-25DOI: 10.1007/s10725-024-01171-9
Abdul Jalal, Daochen Zhu
The model showcases the capability of phytoremediation to address environmental pollution by utilizing particular plant species to reduce harmful contaminants in soil, water, and air, promoting sustainable agriculture.
{"title":"A hypothetical model of phytoremediation for bioremediation of heavy metals toxicity in agricultural system","authors":"Abdul Jalal, Daochen Zhu","doi":"10.1007/s10725-024-01171-9","DOIUrl":"https://doi.org/10.1007/s10725-024-01171-9","url":null,"abstract":"<p>The model showcases the capability of phytoremediation to address environmental pollution by utilizing particular plant species to reduce harmful contaminants in soil, water, and air, promoting sustainable agriculture.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"70 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141502816","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Base on atmosphere CO2 concentration increases and Cd pollution stress, the response mechanism of rice to environmental change was studied. To explore the changes of endogenous hormones and organic acids in rice roots under high CO2 and Cd stress, which provide the theoretical basis for future rice production under the double environmental impacts of atmospheric CO2 changes and Cd stress. Rice seedlings (Oryza sativa L., “Beijing No. 2”) were treated from two-leaf stage, with two CO2 concentrations (400 ± 20 μmol/mol and 800 ± 20 μmol/mol, controlled by an artificial climate chamber) and/or three CdCl2 concentrations (0, 50, 150 μmol/L) for 7 days. The growth parameters of rice seedlings were measured. The root endogenous hormones and organic acids contents were determined by high-performance liquid chromatography (HPLC). Results:(1) Increased CO2 concentration promoted the accumulation of aboveground dry weight by 45.6%. The IAA (Indole-3-acetic acid), GA3 (Gibberellins A3) and ZT (Zeatin) contents increased by 15.7%, 1.6% and 26.7%. Citric and fumaric acid contents in roots increased11.7 and 19.8 fold, malic acid secreted from roots decreased by 23.4%. (2) The growth was inhibited under Cd stress alone, including the fresh weight and dry weight of the aboveground part decreased by 48.5% and 15.4%, respectively. The IAA, GA3, ZT, ABA (Abscisic acid), SA (Salicylic acid) and JA (Jasmonic acid) contents increased in roots. The large accumulation of malic acid, lactic acid and citric acid under Cd stress. Tartaric acid content increased 87.5% in roots. (3) Compared with Cd stress, under high CO2 and Cd stress, IAA, ZT and GA3 contents and endogenous hormones ratios significantly increased, and root length and biomass of rice increased (29.9%, 34.1% under high CO2 concentration and heavy Cd stress). The total organic acids secretions decreased. In conclusion, Cd stress inhibited the rice growth, the more produced (such as SA, JA and ABA) and the secreted (as Cd chelation agents) by roots were involved in the defense mechanisms and produced a detoxification mechanism; High CO2 promoted the root growth and resistance to Cd stress by changing hormones and organic acids contents.
{"title":"Effects of high concentration of CO2 and/or Cd stress on endogenous hormones and organic acids contents in rice (Oryza sativaL.) seedling roots","authors":"Jinghui Cui, Wanting OuYang, Xuhao Wang, Zihan Luo, Xiaoyu Wang, Ziyuan Feng, Xiaohui Song, Lianju Ma, Yueying Li, Xuemei Li, Lanlan Wang","doi":"10.1007/s10725-024-01162-w","DOIUrl":"https://doi.org/10.1007/s10725-024-01162-w","url":null,"abstract":"<p>Base on atmosphere CO<sub>2</sub> concentration increases and Cd pollution stress, the response mechanism of rice to environmental change was studied. To explore the changes of endogenous hormones and organic acids in rice roots under high CO<sub>2</sub> and Cd stress, which provide the theoretical basis for future rice production under the double environmental impacts of atmospheric CO<sub>2</sub> changes and Cd stress. Rice seedlings (<i>Oryza sativa</i> L., “Beijing No. 2”) were treated from two-leaf stage, with two CO<sub>2</sub> concentrations (400 ± 20 μmol/mol and 800 ± 20 μmol/mol, controlled by an artificial climate chamber) and/or three CdCl<sub>2</sub> concentrations (0, 50, 150 μmol/L) for 7 days. The growth parameters of rice seedlings were measured. The root endogenous hormones and organic acids contents were determined by high-performance liquid chromatography (HPLC). Results:(1) Increased CO<sub>2</sub> concentration promoted the accumulation of aboveground dry weight by 45.6%. The IAA (Indole-3-acetic acid), GA<sub>3</sub> (Gibberellins A3) and ZT (Zeatin) contents increased by 15.7%, 1.6% and 26.7%. Citric and fumaric acid contents in roots increased11.7 and 19.8 fold, malic acid secreted from roots decreased by 23.4%. (2) The growth was inhibited under Cd stress alone, including the fresh weight and dry weight of the aboveground part decreased by 48.5% and 15.4%, respectively. The IAA, GA<sub>3</sub>, ZT, ABA (Abscisic acid), SA (Salicylic acid) and JA (Jasmonic acid) contents increased in roots. The large accumulation of malic acid, lactic acid and citric acid under Cd stress. Tartaric acid content increased 87.5% in roots. (3) Compared with Cd stress, under high CO<sub>2</sub> and Cd stress, IAA, ZT and GA<sub>3</sub> contents and endogenous hormones ratios significantly increased, and root length and biomass of rice increased (29.9%, 34.1% under high CO<sub>2</sub> concentration and heavy Cd stress). The total organic acids secretions decreased. In conclusion, Cd stress inhibited the rice growth, the more produced (such as SA, JA and ABA) and the secreted (as Cd chelation agents) by roots were involved in the defense mechanisms and produced a detoxification mechanism; High CO<sub>2</sub> promoted the root growth and resistance to Cd stress by changing hormones and organic acids contents.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"57 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141502815","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cinnamomum burmannii, a medicinal plant with a history of traditional use in Chinese folk medicine, utilizes various plant parts, including bark, root bark, leaves, and stems, for therapeutic purposes. Recent investigations into the essential oil extracted from the twigs and leaves of C. burmannii have revealed a notable abundance of volatile monoterpenes, especially D-borneol, α-pinene, and camphene. In this study, an extensive chemical profiling on the essential oil of the roots, stems, and leaves of C. burmannii was conducted. The analysis results indicated that the root and leaf components exhibit the most diverse and the most abundant of volatile monoterpenes, respectively. To elucidate the biosynthesis of monoterpenes in C. burmannii, candidate genes with monoterpene synthase activities were identified through transcriptome sequencing. Subsequently, function characterization on three mono-terpene synthases (TPSs), designated as CbTPS1, CbTPS2, and CbTPS3, were conducted using phylogenetic analysis and heterogeneous expression in Escherichia coli. The primary enzymatic products were identified as 3-carene, α-phellandrene, and bornyl diphosphate (BPP), respectively. Additionally, a confocal laser microscopy assay suggested the chloroplast localization of these mono-TPSs through transient expression in tobacco. Further validation of their functionality was confirmed through eukaryotic expression in tobacco. In conclusion, this study has unveiled critical enzymes responsible for the biosynthesis of major monoterpenes in C. burmannii. These findings provide essential elements for future studies in synthetic biology, facilitating a deep understanding of the biosynthetic pathways and potential applications in medicinal plant engineering.
肉桂(Cinnamomum burmannii)是一种药用植物,在中国民间医药中有着传统的使用历史,它的各种植物部分(包括树皮、根皮、叶和茎)都可用于治疗目的。最近对从毛地黄树枝和叶中提取的精油进行了研究,发现其中含有大量挥发性单萜,尤其是 D-龙脑、α-蒎烯和莰烯。本研究对 C. burmannii 的根、茎和叶的精油进行了广泛的化学分析。分析结果表明,根和叶的成分分别表现出最多样和最丰富的挥发性单萜烯。为了阐明 C. burmannii 中单萜烯的生物合成,通过转录组测序确定了具有单萜烯合成酶活性的候选基因。随后,利用系统进化分析和在大肠杆菌中的异构表达,对三个单萜烯合成酶(TPSs)进行了功能鉴定,分别命名为 CbTPS1、CbTPS2 和 CbTPS3。经鉴定,酶的主要产物分别为 3-蒈烯、α-黄柏烯和二磷酸硼酯(BPP)。此外,激光共聚焦显微分析表明,通过在烟草中的瞬时表达,这些单TPSs被定位在叶绿体中。通过在烟草中的真核表达,进一步验证了它们的功能。总之,本研究揭示了 C. burmannii 中负责主要单萜生物合成的关键酶。这些发现为今后的合成生物学研究提供了基本要素,有助于深入了解生物合成途径以及在药用植物工程中的潜在应用。
{"title":"Identification and functional characterization of three monoterpene synthases from the medicinal plant Cinnamomum burmanii","authors":"Jinqin Huang, Linhuan Li, Yunqi Li, Ting Zhan, Shuping Liu, Zerui Yang, Xiasheng Zheng","doi":"10.1007/s10725-024-01174-6","DOIUrl":"https://doi.org/10.1007/s10725-024-01174-6","url":null,"abstract":"<p><i>Cinnamomum burmannii</i>, a medicinal plant with a history of traditional use in Chinese folk medicine, utilizes various plant parts, including bark, root bark, leaves, and stems, for therapeutic purposes. Recent investigations into the essential oil extracted from the twigs and leaves of <i>C. burmannii</i> have revealed a notable abundance of volatile monoterpenes, especially D-borneol, α-pinene, and camphene. In this study, an extensive chemical profiling on the essential oil of the roots, stems, and leaves of <i>C. burmannii</i> was conducted. The analysis results indicated that the root and leaf components exhibit the most diverse and the most abundant of volatile monoterpenes, respectively. To elucidate the biosynthesis of monoterpenes in <i>C. burmannii</i>, candidate genes with monoterpene synthase activities were identified through transcriptome sequencing. Subsequently, function characterization on three mono-terpene synthases (TPSs), designated as CbTPS1, CbTPS2, and CbTPS3, were conducted using phylogenetic analysis and heterogeneous expression in <i>Escherichia coli</i>. The primary enzymatic products were identified as 3-carene, α-phellandrene, and bornyl diphosphate (BPP), respectively. Additionally, a confocal laser microscopy assay suggested the chloroplast localization of these mono-TPSs through transient expression in tobacco. Further validation of their functionality was confirmed through eukaryotic expression in tobacco. In conclusion, this study has unveiled critical enzymes responsible for the biosynthesis of major monoterpenes in <i>C. burmannii</i>. These findings provide essential elements for future studies in synthetic biology, facilitating a deep understanding of the biosynthetic pathways and potential applications in medicinal plant engineering.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"25 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141502774","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}