Plants, unlike animals, cannot move from one place to another and have to face different climatic disturbances wherever they are growing. So, they have innumerable built-in mechanisms to adapt to various abiotic stressful conditions like drought, heat, cold, and salinity. The changing environmental conditions influence the expression patterns of genes. Epigenetics involves heritable changes in DNA bases or histone proteins, which ultimately create different conformational states of chromatin. The regulatory enzymes of epigenetic modifications are grouped as writers, readers and erasers, which add, recognize and remove the epigenetic marks, respectively. Here, we provide a comprehensive overview of the mechanism of DNA methylation by the RdDM pathway, its maintenance and removal, and different histone modification categories like acetylation, methylation, phosphorylation and ubiquitination. This review further discusses in detail the crucial role these modifications play in adapting to major abiotic stresses and how plants preserve these experiences as stress memory to respond to recurring stresses. It emphasizes the role of epigenetic modifications as a crucial mechanism for building plant’s tolerance and how it can be an important research priority to improve plant growth and development under abiotic stress conditions.
植物与动物不同,不能从一个地方移动到另一个地方,无论在哪里生长,都必须面对不同的气候干扰。因此,植物有无数的内在机制来适应各种非生物压力条件,如干旱、炎热、寒冷和盐度。不断变化的环境条件会影响基因的表达模式。表观遗传学涉及 DNA 碱基或组蛋白的遗传变化,这些变化最终会形成染色质的不同构象状态。表观遗传修饰的调控酶分为写入器、读取器和擦除器,它们分别负责添加、识别和去除表观遗传标记。在此,我们将全面概述 RdDM 途径的 DNA 甲基化机制、其维持和去除,以及不同的组蛋白修饰类别,如乙酰化、甲基化、磷酸化和泛素化。本综述进一步详细讨论了这些修饰在适应主要非生物胁迫中的关键作用,以及植物如何将这些经验作为胁迫记忆保存下来,以应对反复出现的胁迫。它强调了表观遗传修饰作为建立植物耐受性的关键机制的作用,以及如何将其作为改善非生物胁迫条件下植物生长和发育的重要研究重点。
{"title":"Broadening the epigenetic horizon of abiotic stress response in plants","authors":"Himani Chhatwal, Jogindra Naik, Ashutosh Pandey, Prabodh Kumar Trivedi","doi":"10.1007/s10725-024-01152-y","DOIUrl":"https://doi.org/10.1007/s10725-024-01152-y","url":null,"abstract":"<p>Plants, unlike animals, cannot move from one place to another and have to face different climatic disturbances wherever they are growing. So, they have innumerable built-in mechanisms to adapt to various abiotic stressful conditions like drought, heat, cold, and salinity. The changing environmental conditions influence the expression patterns of genes. Epigenetics involves heritable changes in DNA bases or histone proteins, which ultimately create different conformational states of chromatin. The regulatory enzymes of epigenetic modifications are grouped as writers, readers and erasers, which add, recognize and remove the epigenetic marks, respectively. Here, we provide a comprehensive overview of the mechanism of DNA methylation by the RdDM pathway, its maintenance and removal, and different histone modification categories like acetylation, methylation, phosphorylation and ubiquitination. This review further discusses in detail the crucial role these modifications play in adapting to major abiotic stresses and how plants preserve these experiences as stress memory to respond to recurring stresses. It emphasizes the role of epigenetic modifications as a crucial mechanism for building plant’s tolerance and how it can be an important research priority to improve plant growth and development under abiotic stress conditions.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"17 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-05-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140931758","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-09DOI: 10.1007/s10725-024-01147-9
Siyao Tong, Yi Chen, Yingying Wei, Shu Jiang, Jianfen Ye, Feng Xu, Xingfeng Shao
TIFY protein is a plant-specific transcription factor widely found in land plants and plays an important role in plant growth and development, signal transduction and stress response. Although many TIFY gene families have been identified and studied in plants, they have not been well described in octaploid strawberry. In this study, 54 TIFY family genes in strawberry were identified and their biological information was analyzed. The phylogenetic tree showed that FaTIFY genes were divided into four subfamilies: TIFY, JAZ, ZML and PPD. The JAZ subfamily was the largest and can be further divided into five groups. These genes are located on six chromosomes and exhibit a motif range of 3 to 8. Promoter cis-element analysis showed that most FaTIFY genes contain cis-elements associated with plant hormones responses. Real-time quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis showed that FaTIFY genes had different expression patterns under methyl jasmonate (MeJA), and salicylic acid (SA) treatments. At the same time, we also examined the expression pattern of TIFY gene after boea mold infection and predicted the binding of TIFY protein to WRKY transcription factor, providing a theoretical basis for exploring the role of TIFY gene in hormone delivery and plant defense in strawberry.
{"title":"Genome-wide identification and response to exogenous hormones and pathogens of the TIFY gene family in Fragaria ananassa","authors":"Siyao Tong, Yi Chen, Yingying Wei, Shu Jiang, Jianfen Ye, Feng Xu, Xingfeng Shao","doi":"10.1007/s10725-024-01147-9","DOIUrl":"https://doi.org/10.1007/s10725-024-01147-9","url":null,"abstract":"<p>TIFY protein is a plant-specific transcription factor widely found in land plants and plays an important role in plant growth and development, signal transduction and stress response. Although many TIFY gene families have been identified and studied in plants, they have not been well described in octaploid strawberry. In this study, 54 TIFY family genes in strawberry were identified and their biological information was analyzed. The phylogenetic tree showed that <i>FaTIFY</i> genes were divided into four subfamilies: TIFY, JAZ, ZML and PPD. The JAZ subfamily was the largest and can be further divided into five groups. These genes are located on six chromosomes and exhibit a motif range of 3 to 8. Promoter cis-element analysis showed that most <i>FaTIFY</i> genes contain cis-elements associated with plant hormones responses. Real-time quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis showed that <i>FaTIFY</i> genes had different expression patterns under methyl jasmonate (MeJA), and salicylic acid (SA) treatments. At the same time, we also examined the expression pattern of TIFY gene after boea mold infection and predicted the binding of TIFY protein to WRKY transcription factor, providing a theoretical basis for exploring the role of TIFY gene in hormone delivery and plant defense in strawberry.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"156 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140931757","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-08DOI: 10.1007/s10725-024-01140-2
Chung-Ting Kao, Ya-Wen Huang, Jia-Cheng Lin, Tsai-Pin Chou, Chang-Hung Chen, Shang-Che Kuo, Cho-Chun Huang, Gui-Jun Li, Jhong-He Yu, Ying-Lan Chen, Kai Xia, Ying-Chung Jimmy Lin
Plant lodging severely reduced crop yield and quality. Different plant growth regulators (PGRs) have been applied to improve lodging resistance through the regulation of physiological changes, especially on the increase of stem thickness and strength. Melatonin is a pleiotropic PGR for the regulation of plant growth and development. In this study, we demonstrated that the exogenous treatment of melatonin to Glycine max significantly enhanced plant lateral growth by increasing stem diameter. In addition to the stem thickness, secondary cell wall (SCW) deposition acts as another critical factor for stem rigidity for lodging resistance. To understand whether exogenous treatment of melatonin would regulate SCW biosynthesis genes, we performed transcriptomic analyses on the stems of Glycine max with or without melatonin treatment. Through the differentially-expressed-genes (DEGs) analyses, many SCW biosynthesis genes were found to be regulated by melatonin, including the cellulose, hemicellulose and lignin biosynthesis enzymes. We also found that the two known master regulators, NAC and MYB, of SCW biosynthesis genes were induced under melatonin treatment, which further supported our observation on the differential expression of SCW biosynthesis genes. Our study highlighted the improvement of lodging resistance by the exogenous treatment of melatonin through the increase of plant stem thickness and the regulation of SCW biosynthesis genes and their upstream TFs in Glycine max.
{"title":"Induction of secondary cell wall biosynthesis genes and their regulators by melatonin in Glycine max","authors":"Chung-Ting Kao, Ya-Wen Huang, Jia-Cheng Lin, Tsai-Pin Chou, Chang-Hung Chen, Shang-Che Kuo, Cho-Chun Huang, Gui-Jun Li, Jhong-He Yu, Ying-Lan Chen, Kai Xia, Ying-Chung Jimmy Lin","doi":"10.1007/s10725-024-01140-2","DOIUrl":"https://doi.org/10.1007/s10725-024-01140-2","url":null,"abstract":"<p>Plant lodging severely reduced crop yield and quality. Different plant growth regulators (PGRs) have been applied to improve lodging resistance through the regulation of physiological changes, especially on the increase of stem thickness and strength. Melatonin is a pleiotropic PGR for the regulation of plant growth and development. In this study, we demonstrated that the exogenous treatment of melatonin to <i>Glycine max</i> significantly enhanced plant lateral growth by increasing stem diameter. In addition to the stem thickness, secondary cell wall (SCW) deposition acts as another critical factor for stem rigidity for lodging resistance. To understand whether exogenous treatment of melatonin would regulate SCW biosynthesis genes, we performed transcriptomic analyses on the stems of <i>Glycine max</i> with or without melatonin treatment. Through the differentially-expressed-genes (DEGs) analyses, many SCW biosynthesis genes were found to be regulated by melatonin, including the cellulose, hemicellulose and lignin biosynthesis enzymes. We also found that the two known master regulators, NAC and MYB, of SCW biosynthesis genes were induced under melatonin treatment, which further supported our observation on the differential expression of SCW biosynthesis genes. Our study highlighted the improvement of lodging resistance by the exogenous treatment of melatonin through the increase of plant stem thickness and the regulation of SCW biosynthesis genes and their upstream TFs in <i>Glycine max</i>.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"31 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140889366","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Forsythia suspensa (Thunb.) Vahl is a self-incompatible, heterostylous plant with style-length dimorphism. Heterostyly is a unique flower polymorphism in dioecious angiosperms. Previous research has demonstrated that in heterostylous species like Primula and Turnera, brassinosteroids (BRs) regulate style length. However, the regulatory mechanism of F. suspensa heterostyly remains poorly understood. In this study, we investigated the morphological and cytological differences between the long (L) and short (S) morphs of F. suspensa. We measured the amounts of Teasterone (TE), Typhasterol (TY), Castasterone (CS), and Brassinolide (BL) in the styles. Furthermore, we used topical treatment of the BR inhibitor propiconazole (PPZ) to investigate its impact on style elongation. To clarify the function of BRs in controlling style length, we identified key genes and evaluated their expression levels by analyzing the transcriptome data of F. suspensa. Our findings show that, in contrast to the S-morph, the L-morph shows significant elongation from the flower bud scale abscission phase to the dew corolla phase. L-morph styles have a much higher castasterone level than S-morph styles, and treatment with propiconazole, an inhibitor of BR production, prevents style elongation in the L-morph. Furthermore, transcriptome analysis revealed that the putative orthologous gene of TCH4, a BR-responsive gene, exhibits higher expression in the L-morph compared to S-morph. These findings support the role of BRs as regulators of distinct style lengths in F. suspensa. Additionally, we found that EVM0011396 gene (annotated as FsCYP749A22), encoding a putative BR-degrading enzyme, shows increased expression during S-morph style development, with significantly higher expression in S-morph styles compared to L-morph styles. In contrast, the expression level of EVM0028947 (annotated as FsCYP90D1) coding for a BR biosynthesis gene, is higher in L-morph styles compared to S-morph styles. The expression patterns of EVM0028947 and EVM0011396 suggest their involvement in BR homeostasis in F. suspensa styles. This study provides insight into the molecular mechanism underlying the heterostyly of F. suspensa and lays the foundation for further exploration of this phenomenon.
Forsythia suspensa (Thunb.) Vahl 是一种自交不亲和的异柄植物,具有花柱长度二态性。异柱花是雌雄异株被子植物中一种独特的花多态性。以往的研究表明,在报春花和葑草等异柱植物中,铜绿素类固醇(BR)可调节花柱长度。然而,人们对悬铃木异型花柱的调控机制仍然知之甚少。在本研究中,我们研究了悬铃木长(L)和短(S)形态之间的形态和细胞学差异。我们测量了花柱中 Teasterone(TE)、Typhasterol(TY)、Castasterone(CS)和 Brassinolide(BL)的含量。此外,我们还使用BR抑制剂丙环唑(PPZ)进行局部处理,以研究其对花柱伸长的影响。为了明确BR在控制花柱长度方面的功能,我们通过分析悬铃木的转录组数据,确定了关键基因并评估了其表达水平。我们的研究结果表明,与 S-形态不同,L-形态的花柱从花蕾鳞片脱落期到花冠露珠期有明显的伸长。L 形态花柱的蓖麻酮含量远高于 S 形态花柱,用抑制 BR 生成的丙环唑处理可阻止 L 形态花柱的伸长。此外,转录组分析表明,与 S 形态相比,BR 响应基因 TCH4 的推测同源基因在 L 形态中的表达量更高。这些发现证明了 BRs 在悬铃木中作为不同花柱长度调节因子的作用。此外,我们还发现,编码一种假定的 BR 降解酶的 EVM0011396 基因(注释为 FsCYP749A22)在 S 形态花柱发育过程中的表达量增加,S 形态花柱中的表达量显著高于 L 形态花柱中的表达量。相比之下,编码 BR 生物合成基因的 EVM0028947(注释为 FsCYP90D1)在 L 形态花柱中的表达水平高于 S 形态花柱。EVM0028947 和 EVM0011396 的表达模式表明,它们参与了悬铃木花柱中的 BR 平衡。本研究深入揭示了悬铃木异型花柱的分子机制,为进一步探讨这一现象奠定了基础。
{"title":"Study on the brassinosteroids modulated regulation of the style growth in Forsythia suspensa (Thunb.) Vahl","authors":"Yun Song, Zheng Li, Xiaorong Du, Aoxuan Li, Yaping Cao, Mengjun Jia, Yanbing Niu, Yonggang Qiao","doi":"10.1007/s10725-024-01149-7","DOIUrl":"https://doi.org/10.1007/s10725-024-01149-7","url":null,"abstract":"<p><i>Forsythia suspensa</i> (Thunb.) Vahl is a self-incompatible, heterostylous plant with style-length dimorphism. Heterostyly is a unique flower polymorphism in dioecious angiosperms. Previous research has demonstrated that in heterostylous species like <i>Primula</i> and <i>Turnera</i>, brassinosteroids (BRs) regulate style length. However, the regulatory mechanism of <i>F. suspensa</i> heterostyly remains poorly understood. In this study, we investigated the morphological and cytological differences between the long (L) and short (S) morphs of <i>F. suspensa</i>. We measured the amounts of Teasterone (TE), Typhasterol (TY), Castasterone (CS), and Brassinolide (BL) in the styles. Furthermore, we used topical treatment of the BR inhibitor propiconazole (PPZ) to investigate its impact on style elongation. To clarify the function of BRs in controlling style length, we identified key genes and evaluated their expression levels by analyzing the transcriptome data of <i>F. suspensa</i>. Our findings show that, in contrast to the S-morph, the L-morph shows significant elongation from the flower bud scale abscission phase to the dew corolla phase. L-morph styles have a much higher castasterone level than S-morph styles, and treatment with propiconazole, an inhibitor of BR production, prevents style elongation in the L-morph. Furthermore, transcriptome analysis revealed that the putative orthologous gene of <i>TCH4</i>, a BR-responsive gene, exhibits higher expression in the L-morph compared to S-morph. These findings support the role of BRs as regulators of distinct style lengths in <i>F. suspensa.</i> Additionally, we found that <i>EVM0011396</i> gene (annotated as <i>FsCYP749A22</i>), encoding a putative BR-degrading enzyme, shows increased expression during S-morph style development, with significantly higher expression in S-morph styles compared to L-morph styles. In contrast, the expression level of <i>EVM0028947</i> (annotated as <i>FsCYP90D1</i>) coding for a BR biosynthesis gene, is higher in L-morph styles compared to S-morph styles. The expression patterns of <i>EVM0028947</i> and <i>EVM0011396</i> suggest their involvement in BR homeostasis in <i>F. suspensa</i> styles. This study provides insight into the molecular mechanism underlying the heterostyly of <i>F. suspensa</i> and lays the foundation for further exploration of this phenomenon.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"49 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-05-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140889350","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.1007/s10725-024-01145-x
Janaína Piza Ferreira, Daniele Maria Marques, Décio Karam, Emerson Borghi, Paulo César Magalhães, Kamila Rezende Dázio de Souza, Sara Dousseau Arantes, Thiago Corrêa de Souza
Defoliation is a type of mechanical stress, and few studies have investigated this process in the early stages of maize development. Pest attacks, hail and machinery traffic have increased in recent decades, thus increasing this stress and potentially leading to losses. Furthermore, there are corn production systems in Brazil where early defoliation naturally occurs. Thus, the objective of this study was to determine the morphophysiological and biochemical changes in maize subjected to early defoliation and their effects on recovery from this stress. The experiment was performed in pots, and the plants were subjected to two treatments at the four fully expanded leaf stage: without defoliation (control) and with defoliation. Morphometric parameters, such as gas exchange, leaf pigment and biomolecule content, phytohormone content, root morphology and leaf anatomy, were evaluated at seven and fourteen days after defoliation. Compared with the control plants, the defoliated corn plants were shorter in height, stem diameter, length, surface area, root diameter and volume, dry biomass and leaf anatomy. However, photosynthesis, chlorophyll content and nutrient content were similar in both treatments. After seven days of treatment, the amino acid content increased in the defoliated plants, and after fourteen days, the reducing sugars, amino acids and proteins decreased in these plants. The levels of gibberellins and salicylic acid were greater in plants subjected to defoliation. The reestablishment of corn plants after defoliation occurred through the action of gibberellins and salicylic acid, which promoted the growth of aboveground biomass, maintenance of chlorophylls and gas exchange. The reallocation of amino acids and reducing sugars also contributes to the formation of new leaf primordia in defoliated plants.
{"title":"How does early defoliation influence the morphophysiology and biochemical characteristics of maize?","authors":"Janaína Piza Ferreira, Daniele Maria Marques, Décio Karam, Emerson Borghi, Paulo César Magalhães, Kamila Rezende Dázio de Souza, Sara Dousseau Arantes, Thiago Corrêa de Souza","doi":"10.1007/s10725-024-01145-x","DOIUrl":"https://doi.org/10.1007/s10725-024-01145-x","url":null,"abstract":"<p>Defoliation is a type of mechanical stress, and few studies have investigated this process in the early stages of maize development. Pest attacks, hail and machinery traffic have increased in recent decades, thus increasing this stress and potentially leading to losses. Furthermore, there are corn production systems in Brazil where early defoliation naturally occurs. Thus, the objective of this study was to determine the morphophysiological and biochemical changes in maize subjected to early defoliation and their effects on recovery from this stress. The experiment was performed in pots, and the plants were subjected to two treatments at the four fully expanded leaf stage: without defoliation (control) and with defoliation. Morphometric parameters, such as gas exchange, leaf pigment and biomolecule content, phytohormone content, root morphology and leaf anatomy, were evaluated at seven and fourteen days after defoliation. Compared with the control plants, the defoliated corn plants were shorter in height, stem diameter, length, surface area, root diameter and volume, dry biomass and leaf anatomy. However, photosynthesis, chlorophyll content and nutrient content were similar in both treatments. After seven days of treatment, the amino acid content increased in the defoliated plants, and after fourteen days, the reducing sugars, amino acids and proteins decreased in these plants. The levels of gibberellins and salicylic acid were greater in plants subjected to defoliation. The reestablishment of corn plants after defoliation occurred through the action of gibberellins and salicylic acid, which promoted the growth of aboveground biomass, maintenance of chlorophylls and gas exchange. The reallocation of amino acids and reducing sugars also contributes to the formation of new leaf primordia in defoliated plants.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"8 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140889367","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.1007/s10725-024-01144-y
Chengxin Li, Baicui Chen, Fanshan Bu, Liang Li, Qingtao Yu
Main Conclusion: The major QTL qATS1 for rice seedling alkali tolerance was identified by QTL-seq and QTL mapping, and further confirmed that OsMYB305 regulates plant alkali tolerance by affecting the transport of Na+ and K+ in roots and seedlings through qRT-PCR and functional characterization. Rice is a crop sensitive to saline and alkaline stress. However, the scarcity of alkali tolerance genes in rice has resulted in a large number of cultivated rice or germplasm resources that are difficult to cultivate in saline fields. To clone new alkali tolerance genes, we systematically characterized the number of days of seedling survival and sodium and potassium ion concentrations under alkali stress using 840 F2:3 individuals generated from a cross between Hajingdao8 and Tengxi144. Using QTL-seq technology and QTL mapping based on KASP markers, qATS1 was localized to the 77.15 Kb interval on chromosome 1. A MYB gene, OsMYB305, was identified to strongly respond to alkali stress by gene function annotation, mutation detection, and qRT-PCR analysis of this interval. Knockdown of OsMYB305 in HJD8 resulted in a massive transfer of Na+ and K+ from the mutant roots to the leaves, leading to the death of osmyb305 leaves after 18 days of alkali stress. In conclusion, this study identified OsMYB305 as an alkali tolerance gene, and the variation of 19 SNPs in the promoter region of OsMYB305 and 4 SNPs on exons can provide a theoretical basis for future search of molecular mechanisms upstream and downstream of OsMYB305 to regulate alkali tolerance and molecular design breeding.
{"title":"OsMYB305 on qATS1 positively regulates alkalinity tolerance at the seedling stage in japonica rice","authors":"Chengxin Li, Baicui Chen, Fanshan Bu, Liang Li, Qingtao Yu","doi":"10.1007/s10725-024-01144-y","DOIUrl":"https://doi.org/10.1007/s10725-024-01144-y","url":null,"abstract":"<p>Main Conclusion: The major QTL <i>qATS1</i> for rice seedling alkali tolerance was identified by QTL-seq and QTL mapping, and further confirmed that <i>OsMYB305</i> regulates plant alkali tolerance by affecting the transport of Na<sup>+</sup> and K<sup>+</sup> in roots and seedlings through qRT-PCR and functional characterization. Rice is a crop sensitive to saline and alkaline stress. However, the scarcity of alkali tolerance genes in rice has resulted in a large number of cultivated rice or germplasm resources that are difficult to cultivate in saline fields. To clone new alkali tolerance genes, we systematically characterized the number of days of seedling survival and sodium and potassium ion concentrations under alkali stress using 840 F<sub>2:3</sub> individuals generated from a cross between Hajingdao8 and Tengxi144. Using QTL-seq technology and QTL mapping based on KASP markers, <i>qATS1</i> was localized to the 77.15 Kb interval on chromosome 1. A <i>MYB</i> gene, <i>OsMYB305</i>, was identified to strongly respond to alkali stress by gene function annotation, mutation detection, and qRT-PCR analysis of this interval. Knockdown of <i>OsMYB305</i> in HJD8 resulted in a massive transfer of Na<sup>+</sup> and K<sup>+</sup> from the mutant roots to the leaves, leading to the death of <i>osmyb305</i> leaves after 18 days of alkali stress. In conclusion, this study identified <i>OsMYB305</i> as an alkali tolerance gene, and the variation of 19 SNPs in the promoter region of <i>OsMYB305</i> and 4 SNPs on exons can provide a theoretical basis for future search of molecular mechanisms upstream and downstream of <i>OsMYB305</i> to regulate alkali tolerance and molecular design breeding.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"42 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140889215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.1007/s10725-024-01130-4
Ambrose Okem, Wendy A. Stirk, Jeffrey F. Finnie, Johannes van Staden
Hypoxis hemerocallidea is a medicinal plant containing hypoxoside (a pharmacologically active phytosterol diglucoside). This study evaluated the elemental composition in leaves of H. hemerocallidea treated with cadmium (Cd) and aluminium (Al) using scanning electron microscopy (SEM) combined with energy-dispersive X-ray spectroscopy (EDX). The impact of Cd and Al on photosynthetic pigments and performance, antioxidant activities and ultrastructure were also assessed. Corms of H. hemerocallidea were micropropagated, rooted and then exposed to varying concentrations of Cd, Al, and Cd + Al for six weeks. The SEM/EDX analysis indicated a two-fold increase in carbon content across all treated plants compared to the control. No/little Cd was detected in the leaves compared to a progressive increase in Al concentration with increasing Al treatment levels. This indicted that Al is more readily translocated to the shoots compared to Cd. Plants treated with Cd exhibited a significant decrease in total chlorophyll content accompanied by reduced photosynthetic performance and lower relative electron transport rates. Cd and Al exposure led to higher carotenoid, superoxide dismutase and malondialdehyde levels, indicating oxidative stress. Cd-treated plants displayed increased amylase activity and decreased carbohydrates content. Ultrastructural alterations occurred with exposure to Cd and Al, including abnormal swelling or disintegration of chloroplasts and thylakoid degeneration. An increase in starch grains and a decrease in plastoglobuli were also noted. In conclusion, this investigation provides evidence that both Cd and higher concentrations of Al exert detrimental effects on the ultrastructure, metabolism and photosynthetic performance of H. hemerocallidea, contributing to reduced growth and biological activity when stressed.
Hypoxis hemerocallidea 是一种药用植物,含有 hypoxoside(一种具有药理活性的植物甾醇二葡萄糖苷)。本研究使用扫描电子显微镜(SEM)结合能量色散 X 射线光谱(EDX)评估了经镉(Cd)和铝(Al)处理的 H. hemerocallidea 叶子中的元素组成。此外,还评估了镉和铝对光合色素和性能、抗氧化活性和超微结构的影响。H. hemerocallidea的球茎经微繁殖后生根,然后暴露于不同浓度的镉、铝和镉+铝中六周。SEM/EDX 分析表明,与对照组相比,所有处理过的植株的碳含量都增加了两倍。叶片中未检测到/几乎检测不到镉,而随着铝处理水平的提高,铝浓度逐渐增加。这表明,与镉相比,铝更容易转移到芽中。用镉处理过的植物叶绿素总含量显著下降,同时光合作用性能降低,相对电子传输速率降低。接触镉和铝会导致类胡萝卜素、超氧化物歧化酶和丙二醛水平升高,表明存在氧化应激。镉处理的植物淀粉酶活性增加,碳水化合物含量降低。接触镉和铝后,植物的超微结构发生了改变,包括叶绿体异常肿胀或解体以及类木质变性。此外,还发现淀粉粒增加,质粒减少。总之,这项研究提供的证据表明,镉和较高浓度的铝都会对 H. hemerocallidea 的超微结构、新陈代谢和光合作用性能产生不利影响,导致其在受到胁迫时生长和生物活性降低。
{"title":"Stress-related physiological responses and ultrastructural changes in Hypoxis hemerocallidea leaves exposed to cadmium and aluminium","authors":"Ambrose Okem, Wendy A. Stirk, Jeffrey F. Finnie, Johannes van Staden","doi":"10.1007/s10725-024-01130-4","DOIUrl":"https://doi.org/10.1007/s10725-024-01130-4","url":null,"abstract":"<p><i>Hypoxis hemerocallidea</i> is a medicinal plant containing hypoxoside (a pharmacologically active phytosterol diglucoside). This study evaluated the elemental composition in leaves of <i>H. hemerocallidea</i> treated with cadmium (Cd) and aluminium (Al) using scanning electron microscopy (SEM) combined with energy-dispersive X-ray spectroscopy (EDX). The impact of Cd and Al on photosynthetic pigments and performance, antioxidant activities and ultrastructure were also assessed. Corms of <i>H. hemerocallidea</i> were micropropagated, rooted and then exposed to varying concentrations of Cd, Al, and Cd + Al for six weeks. The SEM/EDX analysis indicated a two-fold increase in carbon content across all treated plants compared to the control. No/little Cd was detected in the leaves compared to a progressive increase in Al concentration with increasing Al treatment levels. This indicted that Al is more readily translocated to the shoots compared to Cd. Plants treated with Cd exhibited a significant decrease in total chlorophyll content accompanied by reduced photosynthetic performance and lower relative electron transport rates. Cd and Al exposure led to higher carotenoid, superoxide dismutase and malondialdehyde levels, indicating oxidative stress. Cd-treated plants displayed increased amylase activity and decreased carbohydrates content. Ultrastructural alterations occurred with exposure to Cd and Al, including abnormal swelling or disintegration of chloroplasts and thylakoid degeneration. An increase in starch grains and a decrease in plastoglobuli were also noted. In conclusion, this investigation provides evidence that both Cd and higher concentrations of Al exert detrimental effects on the ultrastructure, metabolism and photosynthetic performance of <i>H. hemerocallidea</i>, contributing to reduced growth and biological activity when stressed.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"28 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140889299","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-04DOI: 10.1007/s10725-024-01138-w
Shuhui Xu, Shuting Wang, Zhichao Wang, Yue Lu, Tianyun Tao, Qianfeng Huang, Zhou Lu, Hanyao Wang, Yanze Su, Ahmed Gharib, Yong Zhou, Yan Xu, Pengcheng Li, Rujia Chen, Zefeng Yang
Melatonin is an important phytohormone influencing plant growth and defense responses. However, the mechanism mediating the regulatory effects of melatonin on the salt tolerance of germinating maize seeds remains unexplored. In this study, the application of exogenous melatonin enhanced the salt tolerance of germinating maize seeds. A transcriptome analysis indicated that complex regulatory pathways may be associated with the melatonin-mediated salt tolerance. Remarkably, antioxidant activities, transcriptional regulation, and phytohormone (e.g., cytokinin and auxin) pathways were induced following the exogenous application of melatonin. The microRNA (miRNA)-seq analysis result indicated that exogenous melatonin obviously altered the expression of a set of miRNAs. Notably, many differentially expressed miRNAs and their target genes, including several transcription factor genes, were revealed to contribute to salt stress responses. According to metabolite profiles, the abundance of diverse metabolites, like secondary metabolites, nucleotides, cofactors, and vitamins, increased significantly after using exogenous melatonin. The combined analysis of the transcriptome and metabolome indicated that several gene–metabolite networks related to amino acid metabolism and secondary metabolite biosynthetic pathways are essential for melatonin-mediated maize tolerance to salt stress. Consistent with these findings, exogenously applied melatonin altered the phytohormone levels and increased the antioxidant enzyme activities and energy supply. Our results reflect the significance of melatonin for enhancing the salt tolerance of germinating maize seeds, which is achieved through the regulation of antioxidant capacity, phytohormone content, and metabolic adaptation.
{"title":"Integrative analyses of transcriptome, microRNA-seq and metabolome reveal insights into exogenous melatonin-mediated salt tolerance during seed germination of maize","authors":"Shuhui Xu, Shuting Wang, Zhichao Wang, Yue Lu, Tianyun Tao, Qianfeng Huang, Zhou Lu, Hanyao Wang, Yanze Su, Ahmed Gharib, Yong Zhou, Yan Xu, Pengcheng Li, Rujia Chen, Zefeng Yang","doi":"10.1007/s10725-024-01138-w","DOIUrl":"https://doi.org/10.1007/s10725-024-01138-w","url":null,"abstract":"<p>Melatonin is an important phytohormone influencing plant growth and defense responses. However, the mechanism mediating the regulatory effects of melatonin on the salt tolerance of germinating maize seeds remains unexplored. In this study, the application of exogenous melatonin enhanced the salt tolerance of germinating maize seeds. A transcriptome analysis indicated that complex regulatory pathways may be associated with the melatonin-mediated salt tolerance. Remarkably, antioxidant activities, transcriptional regulation, and phytohormone (e.g., cytokinin and auxin) pathways were induced following the exogenous application of melatonin. The microRNA (miRNA)-seq analysis result indicated that exogenous melatonin obviously altered the expression of a set of miRNAs. Notably, many differentially expressed miRNAs and their target genes, including several transcription factor genes, were revealed to contribute to salt stress responses. According to metabolite profiles, the abundance of diverse metabolites, like secondary metabolites, nucleotides, cofactors, and vitamins, increased significantly after using exogenous melatonin. The combined analysis of the transcriptome and metabolome indicated that several gene–metabolite networks related to amino acid metabolism and secondary metabolite biosynthetic pathways are essential for melatonin-mediated maize tolerance to salt stress. Consistent with these findings, exogenously applied melatonin altered the phytohormone levels and increased the antioxidant enzyme activities and energy supply. Our results reflect the significance of melatonin for enhancing the salt tolerance of germinating maize seeds, which is achieved through the regulation of antioxidant capacity, phytohormone content, and metabolic adaptation.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"25 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140571678","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-03-29DOI: 10.1007/s10725-024-01139-9
Hosakatte Niranjana Murthy, Kadanthottu Sebastian Joseph, Kee Yoeup Paek, So Young Park
Currently, in vitro cell, tissue, and organ cultures are used to produce plant secondary metabolites that are used as natural coloring agents, nutraceuticals, and medications. Various strategies have been applied for the hyperaccumulation of biomass and bioactive secondary compounds in vitro. The elicitation of cultured cells and organs with biotic and abiotic elicitors is an excellent strategy that has yielded promising results. Among various abiotic elicitors, light parameters such as light quality, intensity, and photoperiod have evolved as biotechnological tools to elicit cultures. Of the various light sources tested, ultraviolet (UV) lights, particularly UV-B, red, blue, and a mixture of light emitted by fluorescent light or light-emitting diodes, have yielded outstanding results and boosted the accumulation of bioactive compounds in cultured cells and organs. The objective of the current study was to evaluate light as an elicitor source and summarize the advantages and limitations of various light sources as elicitors for the bioaccumulation of secondary metabolites in vitro. The mechanism of the elicitation of secondary metabolism by UV and spectral light is discussed in this review.
{"title":"Light as an elicitor for enhanced production of secondary metabolites in plant cell, tissue, and organ cultures","authors":"Hosakatte Niranjana Murthy, Kadanthottu Sebastian Joseph, Kee Yoeup Paek, So Young Park","doi":"10.1007/s10725-024-01139-9","DOIUrl":"https://doi.org/10.1007/s10725-024-01139-9","url":null,"abstract":"<p>Currently, in vitro cell, tissue, and organ cultures are used to produce plant secondary metabolites that are used as natural coloring agents, nutraceuticals, and medications. Various strategies have been applied for the hyperaccumulation of biomass and bioactive secondary compounds in vitro. The elicitation of cultured cells and organs with biotic and abiotic elicitors is an excellent strategy that has yielded promising results. Among various abiotic elicitors, light parameters such as light quality, intensity, and photoperiod have evolved as biotechnological tools to elicit cultures. Of the various light sources tested, ultraviolet (UV) lights, particularly UV-B, red, blue, and a mixture of light emitted by fluorescent light or light-emitting diodes, have yielded outstanding results and boosted the accumulation of bioactive compounds in cultured cells and organs. The objective of the current study was to evaluate light as an elicitor source and summarize the advantages and limitations of various light sources as elicitors for the bioaccumulation of secondary metabolites in vitro. The mechanism of the elicitation of secondary metabolism by UV and spectral light is discussed in this review.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"39 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-03-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140322414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-03-22DOI: 10.1007/s10725-024-01131-3
Ruixin Nie, Xiaoli Wei, Nianqing Jin, Shicheng Su, Xinyu Chen
To reveal responses of photosynthetic physiological characteristics in Phoebe bournei seedlings to different light qualities and provide a basis for light environment regulation in seedling cultivation and under-canopy regeneration, we analyzed the photosynthetic physiological characteristics of P. bournei seedlings under five types of light qualities (white, red, blue, green, red: blue = 1:1) with the same photosynthetic photon flux density of 100 ± 5 μmol·m−2·s−1. The results showed that blue light significantly promoted chlorophyll content, Rubisco, RCA and photosynthetic rate (Pn), but water use efficiency (WUE) was reduced by blue light. The red light treatment exhibited the highest initial fluorescence (Fo), but wasn't conducive to the accumulation of photosynthetic pigments and had the lowest maximum photochemical efficiency (Fv/Fm) and potential photochemical efficiency (Fv/Fo). The seedlings treated by green light showed the lowest Pn, Tr, WUE, rubisco, with the highest Fv/Fm and Fv/Fo. Red-blue light significantly increased WUE, photosynthetic electron transfer rate (ETR), actual photosynthetic efficiency Y(II), and quantum yield of regulated energy dissipation Y(NPQ) in PSII of P. bournei seedlings, with the second highest Pn across treatments. In conclusion, the effects of single light quality on photosynthetic characteristics of P. bournei seedlings exhibited both advantages and disadvantages. The combination of red and blue light, which integrated the advantages of single light quality, enhanced the photosynthetic performance and photoprotective ability of P. bournei seedlings. It promoted the energy conversion and utilization efficiency of PSII, resulting in the best carbon assimilation efficiency. Therefore, red-blue light promoted the growth and development of Phoebe bournei seedlings.
{"title":"Response of photosynthetic pigments, gas exchange and chlorophyll fluorescence parameters to light quality in Phoebe bournei seedlings","authors":"Ruixin Nie, Xiaoli Wei, Nianqing Jin, Shicheng Su, Xinyu Chen","doi":"10.1007/s10725-024-01131-3","DOIUrl":"https://doi.org/10.1007/s10725-024-01131-3","url":null,"abstract":"<p>To reveal responses of photosynthetic physiological characteristics in <i>Phoebe bournei</i> seedlings to different light qualities and provide a basis for light environment regulation in seedling cultivation and under-canopy regeneration, we analyzed the photosynthetic physiological characteristics of <i>P. bournei</i> seedlings under five types of light qualities (white, red, blue, green, red: blue = 1:1) with the same photosynthetic photon flux density of 100 ± 5 μmol·m<sup>−2</sup>·s<sup>−1</sup>. The results showed that blue light significantly promoted chlorophyll content, Rubisco, RCA and photosynthetic rate (<i>P</i>n), but water use efficiency (WUE) was reduced by blue light. The red light treatment exhibited the highest initial fluorescence (<i>F</i>o), but wasn't conducive to the accumulation of photosynthetic pigments and had the lowest maximum photochemical efficiency (<i>F</i>v/<i>F</i>m) and potential photochemical efficiency (<i>F</i>v/<i>F</i>o). The seedlings treated by green light showed the lowest <i>P</i>n, <i>T</i>r, WUE, rubisco, with the highest <i>F</i>v<i>/F</i>m and <i>F</i>v<i>/F</i>o. Red-blue light significantly increased WUE, photosynthetic electron transfer rate (ETR), actual photosynthetic efficiency Y(II), and quantum yield of regulated energy dissipation Y(NPQ) in PSII of <i>P. bournei</i> seedlings, with the second highest <i>Pn</i> across treatments. In conclusion, the effects of single light quality on photosynthetic characteristics of <i>P. bournei</i> seedlings exhibited both advantages and disadvantages. The combination of red and blue light, which integrated the advantages of single light quality, enhanced the photosynthetic performance and photoprotective ability of <i>P. bournei</i> seedlings. It promoted the energy conversion and utilization efficiency of PSII, resulting in the best carbon assimilation efficiency. Therefore, red-blue light promoted the growth and development of <i>Phoebe bournei</i> seedlings.</p>","PeriodicalId":20412,"journal":{"name":"Plant Growth Regulation","volume":"1 1","pages":""},"PeriodicalIF":4.2,"publicationDate":"2024-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140200490","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}