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Correction to: Adenosine-to-inosine RNA editing in cancer: molecular mechanisms and downstream targets. 更正:癌症中的腺苷转肌苷 RNA 编辑:分子机制和下游靶点。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-11-08 DOI: 10.1093/procel/pwae062
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引用次数: 0
p21/Zbtb18 repress the expression of cKit to regulate the self-renewal of hematopoietic stem cells. p21/Zbtb18 抑制 cKit 的表达,从而调节造血干细胞的自我更新。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-11-01 DOI: 10.1093/procel/pwae022
Nini Wang, Shangda Yang, Yu Li, Fanglin Gou, Yanling Lv, Xiangnan Zhao, Yifei Wang, Chang Xu, Bin Zhou, Fang Dong, Zhenyu Ju, Tao Cheng, Hui Cheng

The maintenance of hematopoietic stem cells (HSCs) is a complex process involving numerous cell-extrinsic and -intrinsic regulators. The first member of the cyclin-dependent kinase family of inhibitors to be identified, p21, has been reported to perform a wide range of critical biological functions, including cell cycle regulation, transcription, differentiation, and so on. Given the previous inconsistent results regarding the functions of p21 in HSCs in a p21-knockout mouse model, we employed p21-tdTomato (tdT) mice to further elucidate its role in HSCs during homeostasis. The results showed that p21-tdT+ HSCs exhibited increased self-renewal capacity compared to p21-tdT- HSCs. Zbtb18, a transcriptional repressor, was upregulated in p21-tdT+ HSCs, and its knockdown significantly impaired the reconstitution capability of HSCs. Furthermore, p21 interacted with ZBTB18 to co-repress the expression of cKit in HSCs and thus regulated the self-renewal of HSCs. Our data provide novel insights into the physiological role and mechanisms of p21 in HSCs during homeostasis independent of its conventional role as a cell cycle inhibitor.

造血干细胞(HSCs)的维持是一个复杂的过程,涉及众多细胞内外调控因子。据报道,细胞周期蛋白依赖性激酶抑制剂家族的第一个成员p21具有广泛的关键生物学功能,包括细胞周期调控、转录、分化等。鉴于之前在p21基因敲除小鼠模型中关于p21在造血干细胞中功能的结果不一致,我们采用了p21-tdTomato(tdT)小鼠来进一步阐明其在造血干细胞稳态过程中的作用。结果显示,与 p21-tdT- HSCs 相比,p21-tdT+ HSCs 表现出更强的自我更新能力。转录抑制因子Zbtb18在p21-tdT+造血干细胞中上调,敲除Zbtb18会显著削弱造血干细胞的重建能力。此外,p21与ZBTB18相互作用,共同抑制造血干细胞中cKit的表达,从而调控造血干细胞的自我更新。我们的数据为了解 p21 在造血干细胞平衡过程中的生理作用和机制提供了新的视角,而不局限于其作为细胞周期抑制剂的传统作用。
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引用次数: 0
Correction to: Oncogenic miR-19a and miR-19b co-regulate tumor suppressor MTUS1 to promote cell proliferation and migration in lung cancer. 更正为致癌 miR-19a 和 miR-19b 共同调节肿瘤抑制因子 MTUS1,促进肺癌细胞的增殖和迁移。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-11-01 DOI: 10.1093/procel/pwad062
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引用次数: 0
Syn3, a newly developed cyclic peptide and BDNF signaling enhancer, ameliorates retinal ganglion cell degeneration in diabetic retinopathy. Syn3 是一种新开发的环肽和 BDNF 信号增强剂,可改善糖尿病视网膜病变中视网膜神经节细胞的退化。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-11-01 DOI: 10.1093/procel/pwae028
Ke-Ran Li, Meng-Jia Huan, Jin Yao, Jia-Jun Li, Yuan Cao, Suyu Wang, Mandar T Naik, Yuan Fang, John Marshall, Chang-Gong Lan, Cong Cao
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引用次数: 0
Integrative analysis of transcriptome, DNA methylome, and chromatin accessibility reveals candidate therapeutic targets in hypertrophic cardiomyopathy. 转录组、DNA 甲基化组和染色质可及性的综合分析揭示了肥厚型心肌病的候选治疗靶点。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-11-01 DOI: 10.1093/procel/pwae032
Junpeng Gao, Mengya Liu, Minjie Lu, Yuxuan Zheng, Yan Wang, Jingwei Yang, Xiaohui Xue, Yun Liu, Fuchou Tang, Shuiyun Wang, Lei Song, Lu Wen, Jizheng Wang

Hypertrophic cardiomyopathy (HCM) is the most common inherited heart disease and is characterized by primary left ventricular hypertrophy usually caused by mutations in sarcomere genes. The mechanism underlying cardiac remodeling in HCM remains incompletely understood. An investigation of HCM through integrative analysis at multi-omics levels will be helpful for treating HCM. DNA methylation and chromatin accessibility, as well as gene expression, were assessed by nucleosome occupancy and methylome sequencing (NOMe-seq) and RNA-seq, respectively, using the cardiac tissues of HCM patients. Compared with those of the controls, the transcriptome, DNA methylome, and chromatin accessibility of the HCM myocardium showed multifaceted differences. At the transcriptome level, HCM hearts returned to the fetal gene program through decreased sarcomeric and metabolic gene expression and increased extracellular matrix gene expression. In the DNA methylome, hypermethylated and hypomethylated differentially methylated regions were identified in HCM. At the chromatin accessibility level, HCM hearts showed changes in different genome elements. Several transcription factors, including SP1 and EGR1, exhibited a fetal-like pattern of binding motifs in nucleosome-depleted regions in HCM. In particular, the inhibition of SP1 or EGR1 in an HCM mouse model harboring sarcomere mutations markedly alleviated the HCM phenotype of the mutant mice and reversed fetal gene reprogramming. Overall, this study not only provides a high-precision multi-omics map of HCM heart tissue but also sheds light on the therapeutic strategy by intervening in the fetal gene reprogramming in HCM.

肥厚型心肌病(HCM)是最常见的遗传性心脏病,其特点是原发性左心室肥厚,通常是由肌纤维基因突变引起的。HCM 的心脏重塑机制仍未完全明了。通过多组学水平的综合分析对 HCM 进行研究将有助于治疗 HCM。研究人员利用 HCM 患者的心脏组织,通过核糖体占位和甲基组测序(NOMe-seq)和 RNA-seq 分别评估了 DNA 甲基化和染色质可及性以及基因表达。与对照组相比,HCM 心肌的转录组、DNA 甲基化组和染色质可及性表现出多方面的差异。在转录组水平上,HCM 心脏通过减少肌纤维和代谢基因的表达以及增加细胞外基质基因的表达,恢复到胎儿时期的基因程序。在 DNA 甲基组中,发现了 HCM 中高甲基化和低甲基化的差异甲基化区域(DMR)。在染色质可及性水平上,HCM 心脏的不同基因组元素发生了变化。包括 SP1 和 EGR1 在内的几种转录因子(TFs)在 HCM 的核糖体缺失区(NDRs)表现出胎儿样的结合基序模式。特别是,在携带肌节突变的 HCM 小鼠模型中抑制 SP1 或 EGR1 能明显缓解突变小鼠的 HCM 表型,并逆转胎儿基因重编程。总之,这项研究不仅提供了高精度的 HCM 心脏组织多组学图谱,还揭示了通过干预 HCM 胎儿基因重编程的治疗策略。
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引用次数: 0
Antiviral activity of lipoxygenase against severe fever with thrombocytopenia syndrome virus. 脂氧合酶对严重发热伴血小板减少综合征病毒的抗病毒活性
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-10-29 DOI: 10.1093/procel/pwae061
Shuang Li, Xiaojie Zheng, Yunfa Zhang, Lingyu Zhang, Tong Yang, Hao Li, Caiyu Zhou, Xiao-Ai Zhang, Li-Zeng Gao, Wei Liu
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引用次数: 0
Microbiome, metabolome and transcriptome analyses in esophageal squamous cell carcinoma: Insights into immune modulation by F. nucleatum. 食管鳞状细胞癌的微生物组、代谢组和转录组分析:洞察核酸酵母菌的免疫调节作用。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-10-29 DOI: 10.1093/procel/pwae063
Xue Zhang, Jing Han, Yudong Wang, Li Feng, Zhisong Fan, Yu Su, Wenya Song, Lan Wang, Long Wang, Hui Jin, Jiayin Liu, Dan Li, Guiying Li, Yan Liu, Jing Zuo, Zhiyu Ni
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引用次数: 0
Skin organoid transplantation promotes tissue repair with scarless in frostbite. 皮肤类器官移植可促进冻伤组织的无疤痕修复。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-10-04 DOI: 10.1093/procel/pwae055
Wenwen Wang, Pu Liu, Wendi Zhu, Tianwei Li, Ying Wang, Yujie Wang, Jun Li, Jie Ma, Ling Leng

Frostbite is the most common cold injury and is caused by both immediate cold-induced cell death and the gradual development of localized inflammation and tissue ischemia. Delayed healing of frostbite often leads to scar formation, which not only causes psychological distress but also tends to result in the development of secondary malignant tumors. Therefore, a rapid healing method for frostbite wounds is urgently needed. Herein, we used a mouse skin model of frostbite injury to evaluate the recovery process after frostbite. Moreover, single-cell transcriptomics was used to determine the patterns of changes in monocytes, macrophages, epidermal cells and fibroblasts during frostbite. Most importantly, human-induced pluripotent stem cell (hiPSC) -derived skin organoids combining with gelatin-hydrogel were constructed for the treatment of frostbite. The results showed that skin organoid treatment significantly accelerated wound healing by reducing early inflammation after frostbite and increasing the proportions of epidermal stem cells. Moreover, in the later stage of wound healing, skin organoids reduced the overall proportions of fibroblasts, significantly reduced fibroblast-to-myofibroblast transition by regulating the integrin α5β1-FAK pathway, and remodeled the extracellular matrix (ECM) through degradation and reassembly mechanisms, facilitating the restoration of physiological ECM and reducing the abundance of ECM associated with abnormal scar formation. These results highlight the potential application of organoids for promoting the reversal of frostbite-related injury and the recovery of skin functions. This study provides a new therapeutic alternative for patients suffering from disfigurement and skin dysfunction caused by frostbite.

冻伤是最常见的冷伤,是由冷引起的细胞直接死亡以及局部炎症和组织缺血逐渐发展造成的。冻伤的延迟愈合往往会导致疤痕的形成,这不仅会造成心理上的痛苦,还容易导致继发性恶性肿瘤的发生。因此,冻伤伤口的快速愈合方法迫在眉睫。在此,我们使用冻伤小鼠皮肤模型来评估冻伤后的恢复过程。此外,我们还利用单细胞转录组学确定了冻伤过程中单核细胞、巨噬细胞、表皮细胞和成纤维细胞的变化规律。最重要的是,研究人员构建了结合明胶水凝胶的人类诱导多能干细胞(hiPSC)衍生皮肤类器官,用于治疗冻伤。结果表明,皮肤类器官治疗可减少冻伤后的早期炎症,增加表皮干细胞的比例,从而明显加速伤口愈合。此外,在伤口愈合后期,皮肤类器官降低了成纤维细胞的总体比例,通过调节整合素α5β1-FAK通路显著减少了成纤维细胞向肌成纤维细胞的转化,并通过降解和重组机制重塑了细胞外基质(ECM),促进了生理性ECM的恢复,减少了与异常疤痕形成相关的ECM的丰度。这些结果突显了有机体在促进冻伤相关损伤逆转和皮肤功能恢复方面的潜在应用。这项研究为冻伤导致的毁容和皮肤功能障碍患者提供了一种新的治疗方法。
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引用次数: 0
Engineered extracellular vesicles enable high-efficient delivery of intracellular therapeutic proteins. 经过设计的细胞外囊泡能够高效输送细胞内治疗蛋白。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-10-01 DOI: 10.1093/procel/pwae015
Ding Ma, An Xie, Jiahui Lv, Xiaolin Min, Xinye Zhang, Qian Zhou, Daxing Gao, Enyu Wang, Lei Gao, Linzhao Cheng, Senquan Liu

Developing an intracellular delivery system is of key importance in the expansion of protein-based therapeutics acting on cytosolic or nuclear targets. Recently, extracellular vesicles (EVs) have been exploited as next-generation delivery modalities due to their natural role in intercellular communication and biocompatibility. However, fusion of protein of interest to a scaffold represents a widely used strategy for cargo enrichment in EVs, which could compromise the stability and functionality of cargo. Herein, we report intracellular delivery via EV-based approach (IDEA) that efficiently packages and delivers native proteins both in vitro and in vivo without the use of a scaffold. As a proof-of-concept, we applied the IDEA to deliver cyclic GMP-AMP synthase (cGAS), an innate immune sensor. The results showed that cGAS-carrying EVs activated interferon signaling and elicited enhanced antitumor immunity in multiple syngeneic tumor models. Combining cGAS EVs with immune checkpoint inhibition further synergistically boosted antitumor efficacy in vivo. Mechanistically, scRNA-seq demonstrated that cGAS EVs mediated significant remodeling of intratumoral microenvironment, revealing a pivotal role of infiltrating neutrophils in the antitumor immune milieu. Collectively, IDEA, as a universal and facile strategy, can be applied to expand and advance the development of protein-based therapeutics.

开发细胞内递送系统对于扩大作用于细胞膜或细胞核靶点的蛋白质疗法至关重要。最近,细胞外囊泡(EVs)因其在细胞间通讯中的天然作用和生物相容性而被用作下一代递送模式。然而,将感兴趣的蛋白质融合到支架上是一种广泛使用的在EVs中富集货物的策略,这可能会损害货物的稳定性和功能性。在此,我们报告了通过基于 EV 的细胞内递送方法(IDEA),该方法无需使用支架即可在体外和体内有效地包装和递送原生蛋白质。作为概念验证,我们将 IDEA 用于递送先天性免疫传感器环 GMP-AMP 合成酶(cGAS)。结果表明,携带cGAS的EVs能激活干扰素信号传导,并在多种合成肿瘤模型中激发增强的抗肿瘤免疫力。将cGAS EVs与免疫检查点抑制剂相结合,可进一步协同提高体内抗肿瘤疗效。scRNA-seq从机制上证明,cGAS EVs介导了瘤内微环境的显著重塑,揭示了浸润中性粒细胞在抗肿瘤免疫环境中的关键作用。总之,IDEA 作为一种通用而简便的策略,可用于拓展和推进基于蛋白质的疗法的开发。
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引用次数: 0
Whole-exome sequencing identifies ECPAS as a novel potentially pathogenic gene in multiple hereditary families with nonsyndromic orofacial cleft. 全基因组测序发现,ECPAS 是多个非综合征口面裂遗传性家族中的一个新的潜在致病基因。
IF 13.6 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-10-01 DOI: 10.1093/procel/pwae021
Huaxiang Zhao, Wenjie Zhong, Wenbin Huang, Guozhu Ning, Jieni Zhang, Mengqi Zhang, Peiqi Meng, Yunfan Zhang, Qian Zhang, Hongping Zhu, Gulibaha Maimaitili, Yi Ding, Weiran Li, Wei Liang, Zhibo Zhou, Qiang Wang, Feng Chen, Jiuxiang Lin
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引用次数: 0
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Protein & Cell
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