OBJECTIVE
To assess the diagnostic concordance between non-invasive preimplantation genetic testing for aneuploidy (niPGT-A) and standard PGT-A with trophectoderm biopsy in embryos previously diagnosed as aneuploid.
MATERIALS AND METHODS
Nineteen embryos from four patients previously diagnosed as aneuploid via PGT-A were re-evaluated using niPGT-A upon patient request. Embryos were thawed using the Ultrafast-Kitazato method and incubated in an Esco MIRI incubator. Laboratory preparation included particle reduction, disinfection, and use of DNA/RNA-free single-use materials. Embryologists wore sterile attire. Embryos were washed in four 30 μL drops and transferred to 12 μL culture dishes. Each dish contained three embryo-specific drops and one negative control drop. Incubation was 24 hours for D5 and 8 hours for D6/D7 embryos. Post-incubation, embryos were re-cryopreserved. Eight microliters of medium were collected per embryo into separate PCR tubes. Negative controls were similarly processed. Samples were stored at −20°C and sent to Igenomix TR via cold chain for analysis. Statistical analysis was conducted with a 2 × 2 contingency table.
RESULTS
Of the 19 embryos diagnosed as aneuploid by PGT-A, 18 were also found aneuploid by niPGT-A, 13 with perfect chromosomal match and 5 with minor differences. One embryo was classified as euploid by niPGT-A. This yielded an accuracy of 94.7% (95% CI: 73.9%–99.8%), specificity of 94.7% (95% CI: 73.9%–99.8%), and NPV of 100% (95% CI: 81.5%–100%) for euploidy. Sensitivity, PPV, Cohen’s Kappa, and McNemar’s test could not be calculated due to the absence of PGT-confirmed euploid embryos.
CONCLUSIONS
Our results show that NiPGT-A has very high NPV and specificity compared to the gold standard, PGT-A in aneuploid embryos. However, the small sample size and lack of euploid embryos by PGT limit the generalizability of findings. The euploid outcome may be associated of cumulus cell (CC) contamination, as morphological evaluation of the embryo revealed a greater abundance of CC compared to the others. Notably, 68.4% of embryos showed perfect qualitative agreement between methods. Although minor discrepancies were observed in 26.3% of embryos, all were still reported as aneuploid, suggesting limited clinical impact. Still, further validation with a larger, balanced dataset is necessary to establish the clinical reliability of the NiPGT-A.
IMPACT STATEMENT
niPGT-A offers high specificity and NPV relative to PGT-A in aneuploid embryos, supporting its potential as a non-invasive alternative.
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