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The tumour ecology of quiescence: Niches across scales of complexity 静止的肿瘤生态学:跨越复杂尺度的生态位
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-07-01 DOI: 10.1016/j.semcancer.2023.04.004
Simon P. Castillo , Felipe Galvez-Cancino , Jiali Liu , Steven M. Pollard , Sergio A. Quezada , Yinyin Yuan

Quiescence is a state of cell cycle arrest, allowing cancer cells to evade anti-proliferative cancer therapies. Quiescent cancer stem cells are thought to be responsible for treatment resistance in glioblastoma, an aggressive brain cancer with poor patient outcomes. However, the regulation of quiescence in glioblastoma cells involves a myriad of intrinsic and extrinsic mechanisms that are not fully understood. In this review, we synthesise the literature on quiescence regulatory mechanisms in the context of glioblastoma and propose an ecological perspective to stemness-like phenotypes anchored to the contemporary concepts of niche theory. From this perspective, the cell cycle regulation is multiscale and multidimensional, where the niche dimensions extend to extrinsic variables in the tumour microenvironment that shape cell fate. Within this conceptual framework and powered by ecological niche modelling, the discovery of microenvironmental variables related to hypoxia and mechanosignalling that modulate proliferative plasticity and intratumor immune activity may open new avenues for therapeutic targeting of emerging biological vulnerabilities in glioblastoma.

静止是一种细胞周期停滞状态,使癌症细胞逃避抗增殖癌症治疗。静止的癌症干细胞被认为是胶质母细胞瘤治疗耐药性的原因,胶质母细胞癌是一种侵袭性癌症,患者预后不佳。然而,胶质母细胞瘤细胞静止期的调节涉及许多尚未完全理解的内在和外在机制。在这篇综述中,我们综合了胶质母细胞瘤背景下静止调节机制的文献,并根据生态位理论的当代概念,对干性样表型提出了生态学观点。从这个角度来看,细胞周期调控是多尺度和多维的,其中生态位维度延伸到肿瘤微环境中塑造细胞命运的外在变量。在这个概念框架内,在生态位建模的支持下,发现与缺氧和机械信号相关的微环境变量,调节增殖可塑性和肿瘤内免疫活性,可能为胶质母细胞瘤新出现的生物脆弱性的治疗靶向开辟新的途径。
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引用次数: 0
Excess body weight: Novel insights into its roles in obesity comorbidities 超重:对其在肥胖合并症中作用的新见解
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-07-01 DOI: 10.1016/j.semcancer.2023.03.008
Xiang Zhang, Suki Ha, Harry Cheuk-Hay Lau, Jun Yu

Excess body weight is a global health problem due to sedentary lifestyle and unhealthy diet, affecting 2 billion population worldwide. Obesity is a major risk factor for metabolic diseases. Notably, the metabolic risk of obesity largely depends on body weight distribution, of which visceral adipose tissues but not subcutaneous fats are closely associated with obesity comorbidities, including type 2 diabetes, non-alcoholic fatty liver disease, cardiovascular disease and certain types of cancer. Latest multi-omics and mechanistical studies reported the crucial involvement of genetic and epigenetic alterations, adipokines dysregulation, immunity changes, imbalance of white and brown adipose tissues, and gut microbial dysbiosis in mediating the pathogenic association between visceral adipose tissues and comorbidities. In this review, we explore the epidemiology of excess body weight and the up-to-date mechanism of how excess body weight and obesity lead to chronic complications. We also examine the utilization of visceral fat measurement as an accurate clinical parameter for risk assessment in healthy individuals and clinical outcome prediction in obese subjects. In addition, current approaches for the prevention and treatment of excess body weight and its related metabolic comorbidities are further discussed.

由于久坐不动的生活方式和不健康的饮食,超重是一个全球性的健康问题,影响着全球20亿人口。肥胖是代谢性疾病的主要危险因素。值得注意的是,肥胖的代谢风险在很大程度上取决于体重分布,其中内脏脂肪组织而非皮下脂肪与肥胖合并症密切相关,包括2型糖尿病、非酒精性脂肪性肝病、心血管疾病和某些类型的癌症。最新的多组学和机制研究报道了遗传和表观遗传学改变、脂肪因子失调、免疫变化、白色和棕色脂肪组织失衡以及肠道微生物失调在介导内脏脂肪组织和合并症之间的致病联系中的重要作用。在这篇综述中,我们探讨了超重的流行病学以及超重和肥胖如何导致慢性并发症的最新机制。我们还研究了内脏脂肪测量作为健康个体风险评估和肥胖受试者临床结果预测的准确临床参数的应用。此外,还进一步讨论了目前预防和治疗超重及其相关代谢合并症的方法。
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引用次数: 11
Epigenomic machinery regulating pediatric AML: Clonal expansion mechanisms, therapies, and future perspectives 调节儿童AML的表观基因组机制:克隆扩增机制、疗法和未来展望
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-07-01 DOI: 10.1016/j.semcancer.2023.03.009
Ugo Chianese , Chiara Papulino , Wout Megchelenbrink , Francesco Paolo Tambaro , Fortunato Ciardiello , Rosaria Benedetti , Lucia Altucci

Acute myeloid leukemia (AML) is a heterogeneous disease with a genetic, epigenetic, and transcriptional etiology mainly presenting somatic and germline abnormalities. AML incidence rises with age but can also occur during childhood. Pediatric AML (pAML) accounts for 15–20% of all pediatric leukemias and differs considerably from adult AML. Next-generation sequencing technologies have enabled the research community to “paint” the genomic and epigenomic landscape in order to identify pathology-associated mutations and other prognostic biomarkers in pAML. Although current treatments have improved the prognosis for pAML, chemoresistance, recurrence, and refractory disease remain major challenges. In particular, pAML relapse is commonly caused by leukemia stem cells that resist therapy. Marked patient-to-patient heterogeneity is likely the primary reason why the same treatment is successful for some patients but, at best, only partially effective for others. Accumulating evidence indicates that patient-specific clonal composition impinges significantly on cellular processes, such as gene regulation and metabolism. Although our understanding of metabolism in pAML is still in its infancy, greater insights into these processes and their (epigenetic) modulation may pave the way toward novel treatment options. In this review, we summarize current knowledge on the function of genetic and epigenetic (mis)regulation in pAML, including metabolic features observed in the disease. Specifically, we describe how (epi)genetic machinery can affect chromatin status during hematopoiesis, leading to an altered metabolic profile, and focus on the potential value of targeting epigenetic abnormalities in precision and combination therapy for pAML. We also discuss the possibility of using alternative epidrug-based therapeutic approaches that are already in clinical practice, either alone as adjuvant treatments and/or in combination with other drugs.

急性粒细胞白血病(AML)是一种异质性疾病,其病因包括遗传、表观遗传和转录,主要表现为体细胞和种系异常。AML的发病率随着年龄的增长而上升,但也可能发生在儿童时期。儿童AML(pAML)占所有儿童白血病的15-20%,与成人AML有很大不同。下一代测序技术使研究界能够“描绘”基因组和表观基因组景观,以识别pAML中的病理学相关突变和其他预后生物标志物。尽管目前的治疗已经改善了pAML的预后,但化疗耐药性、复发和难治性疾病仍然是主要的挑战。特别是,pAML复发通常是由白血病干细胞抵抗治疗引起的。显著的患者间异质性可能是相同治疗对某些患者成功,但对其他患者充其量只能部分有效的主要原因。越来越多的证据表明,患者特异性克隆组成显著影响细胞过程,如基因调节和代谢。尽管我们对pAML代谢的理解仍处于初级阶段,但对这些过程及其(表观遗传学)调节的深入了解可能会为新的治疗选择铺平道路。在这篇综述中,我们总结了目前关于pAML中遗传和表观遗传学(mis)调节功能的知识,包括在该疾病中观察到的代谢特征。具体而言,我们描述了(epi)遗传机制如何影响造血过程中的染色质状态,导致代谢谱的改变,并重点关注靶向表观遗传异常在pAML精准治疗和联合治疗中的潜在价值。我们还讨论了使用已经在临床实践中的替代表观药物治疗方法的可能性,无论是单独作为辅助治疗还是与其他药物联合使用。
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引用次数: 0
Insight into the transcription factors regulating Ischemic stroke and glioma in response to shared stimuli 转录因子调控缺血性脑卒中和胶质瘤对共同刺激的反应
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-07-01 DOI: 10.1016/j.semcancer.2023.04.006
Arshi Waseem , Summya Rashid , Khalid Rashid , Mohsin Ali Khan , Rehan Khan , Rizwanul Haque , Pankaj Seth , Syed Shadab Raza

Cerebral ischemic stroke and glioma are the two leading causes of patient mortality globally. Despite physiological variations, 1 in 10 people who have an ischemic stroke go on to develop brain cancer, most notably gliomas. In addition, glioma treatments have also been shown to increase the risk of ischemic strokes. Stroke occurs more frequently in cancer patients than in the general population, according to traditional literature. Unbelievably, these events share multiple pathways, but the precise mechanism underlying their co-occurrence remains unknown. Transcription factors (TFs), the main components of gene expression programmes, finally determine the fate of cells and homeostasis. Both ischemic stroke and glioma exhibit aberrant expression of a large number of TFs, which are strongly linked to the pathophysiology and progression of both diseases. The precise genomic binding locations of TFs and how TF binding ultimately relates to transcriptional regulation remain elusive despite a strong interest in understanding how TFs regulate gene expression in both stroke and glioma. As a result, the importance of continuing efforts to understand TF-mediated gene regulation is highlighted in this review, along with some of the primary shared events in stroke and glioma.

缺血性脑卒中和神经胶质瘤是全球患者死亡的两大主要原因。尽管存在生理变异,但每10名缺血性中风患者中就有1人会发展为癌症,尤其是胶质瘤。此外,神经胶质瘤治疗也被证明会增加缺血性中风的风险。根据传统文献,癌症患者中风的发生率高于普通人群。令人难以置信的是,这些事件有多种共同的途径,但它们共同发生的确切机制仍然未知。转录因子是基因表达程序的主要组成部分,最终决定细胞的命运和稳态。缺血性中风和神经胶质瘤都表现出大量TF的异常表达,这与这两种疾病的病理生理学和进展密切相关。尽管人们对了解转录因子如何调节中风和神经胶质瘤中的基因表达非常感兴趣,但转录因子的精确基因组结合位置以及转录因子结合最终如何与转录调控相关仍然难以捉摸。因此,本综述强调了继续努力了解TF介导的基因调控的重要性,以及中风和神经胶质瘤中的一些主要共同事件。
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引用次数: 2
Obesity and multiple myeloma: Emerging mechanisms and perspectives 肥胖与多发性骨髓瘤:新出现的机制和前景
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-07-01 DOI: 10.1016/j.semcancer.2023.04.003
Anastasios Tentolouris , Ioannis Ntanasis-Stathopoulos , Evangelos Terpos

Obesity is a global pandemic that has been associated with the development of breast, endometrial, large intestine, renal, esophageal, and pancreatic cancer. Obesity is also involved in the development of cardiovascular disease and type 2 diabetes mellitus. Recently, an increase in the incidence of obesity-related cancers has been reported. Multiple myeloma (MM) is the second most common hematological malignancy, after lymphoma. The aim of this review is to examine the epidemiological data on obesity and MM, assess the effect of obesity on MM outcomes, evaluate the possible mechanisms through which obesity might increase the incidence of MM and provide the effects of obesity management on MM. Current evidence indicates that obesity may have an impact on the progression of monoclonal gammopathy of undetermined significance (MGUS) to MM and increase the prevalence of MM. However, data regarding the effect of obesity on MGUS incidence are controversial; further studies are needed to examine whether obesity affects the development of MGUS or the progression of MGUS to MM. In addition, obesity affects MM outcomes. Increased BMI is associated with decreased survival in patients with MM, while data regarding the effect of obesity on newly diagnosed MM subjects and autologous stem cell transplantation are limited. Interestingly, the obesity paradox may also apply to patients with relapsed/refractory MM who are overweight or obese, because they may have a survival advantage. The pathophysiological pathways linking obesity to MM are very complicated and include bone marrow adipose tissue; adipokines, such as adiponectin, leptin, resistin, and visfatin; inflammatory cytokines and growth factors, such as TNF-α and IL-6; hormones including insulin and the insulin-like growth factor system as well as sex hormones. In terms of the effect of pharmacological management of obesity, orlistat has been shown to alter the proliferation of MM cells, whereas no data exist on glucagon‐like peptide‐1 receptor agonists, naltrexone/bupropion, or phentermine/topiramate. Bariatric surgery may be associated with a reduction in the incidence of MM, however, further studies are needed.

肥胖是一种全球性流行病,与乳腺癌、子宫内膜癌、大肠癌、肾脏癌、食道癌和胰腺癌癌症的发展有关。肥胖也与心血管疾病和2型糖尿病的发展有关。最近,有报道称肥胖相关癌症的发病率有所上升。多发性骨髓瘤(MM)是仅次于淋巴瘤的第二常见血液系统恶性肿瘤。这篇综述的目的是检查肥胖和MM的流行病学数据,评估肥胖对MM结果的影响,评估肥胖可能增加MM发病率的可能机制,并提供肥胖管理对MM的影响。目前的证据表明,肥胖可能会影响意义不明的单克隆免疫球蛋白病(MGUS)向MM的进展,并增加MM的患病率。然而,关于肥胖对MGUS发病率影响的数据存在争议;需要进一步研究肥胖是否会影响MGUS的发展或MGUS向MM的进展。此外,肥胖还会影响MM的预后。BMI的增加与MM患者的生存率下降有关,而关于肥胖对新诊断的MM受试者和自体干细胞移植的影响的数据有限。有趣的是,肥胖悖论也可能适用于超重或肥胖的复发/难治性MM患者,因为他们可能具有生存优势。将肥胖与MM联系起来的病理生理途径非常复杂,包括骨髓脂肪组织;脂肪因子,如脂联素、瘦素、抵抗素和内脂蛋白;炎性细胞因子和生长因子,如TNF-α和IL-6;包括胰岛素和胰岛素样生长因子系统以及性激素的激素。就肥胖的药理学治疗效果而言,奥利司他已被证明可以改变MM细胞的增殖,而关于胰高血糖素样肽-1受体激动剂、纳曲酮/安非他酮或苯妥明/托吡酯的数据尚不存在。减肥手术可能与MM发病率的降低有关,但还需要进一步的研究。
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引用次数: 1
Epigenetic programing of cancer stemness by transcription factors-non-coding RNAs interactions 转录因子与非编码RNA相互作用对癌症干性的表观遗传编程
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-07-01 DOI: 10.1016/j.semcancer.2023.04.005
Reem Khaled M.E. Alsayed , Khalid Sultan A.M. Sheikhan , Majid Ali Alam , Jorg Buddenkotte , Martin Steinhoff , Shahab Uddin , Aamir Ahmad

Cancer ‘stemness’ is fundamental to cancer existence. It defines the ability of cancer cells to indefinitely perpetuate as well as differentiate. Cancer stem cell populations within a growing tumor also help evade the inhibitory effects of chemo- as well as radiation-therapies, in addition to playing an important role in cancer metastases. NF-κB and STAT-3 are representative transcription factors (TFs) that have long been associated with cancer stemness, thus presenting as attractive targets for cancer therapy. The growing interest in non-coding RNAs (ncRNAs) in the recent years has provided further insight into the mechanisms by which TFs influence cancer stem cell characteristics. There is evidence for a direct regulation of TFs by ncRNAs, such as, microRNAs (miRNAs), long non-coding RNAs (lncRNAs) as well as circular RNAs (circRNAs), and vice versa. Additionally, the TF-ncRNAs regulations are often indirect, involving ncRNA-target genes or the sponging of other ncRNA species by individual ncRNAs. The information is rapidly evolving and this review provides a comprehensive review of TF-ncRNAs interactions with implications on cancer stemness and in response to therapies. Such knowledge will help uncover the many levels of tight regulations that control cancer stemness, providing novel opportunities and targets for therapy in the process.

癌症的“干性”是癌症存在的基础。它定义了癌症细胞无限期延续和分化的能力。生长肿瘤中的癌症干细胞群除了在癌症转移中发挥重要作用外,还有助于逃避化疗和放疗的抑制作用。NF-κB和STAT-3是长期以来与癌症干性相关的代表性转录因子(TF),因此是癌症治疗的有吸引力的靶点。近年来,人们对非编码RNA(ncRNA)的兴趣越来越大,这进一步深入了解了转录因子影响癌症干细胞特征的机制。有证据表明,ncRNA直接调节转录因子,如微小RNA(miRNA)、长非编码RNA(lncRNA)和环状RNA(circRNA),反之亦然。此外,TF ncRNA的调节通常是间接的,涉及ncRNA靶基因或个体ncRNA对其他ncRNA物种的吸收。信息正在迅速发展,这篇综述提供了TF-ncRNA相互作用的全面综述,对癌症干性的影响和对治疗的反应。这些知识将有助于揭示控制癌症干性的许多严格法规,为在此过程中的治疗提供新的机会和靶点。
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引用次数: 4
Predicting gene mutation status via artificial intelligence technologies based on multimodal integration (MMI) to advance precision oncology 利用基于多模态集成(MMI)的人工智能技术预测基因突变状态,推进精准肿瘤学
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-06-01 DOI: 10.1016/j.semcancer.2023.02.006
Jun Shao , Jiechao Ma , Qin Zhang , Weimin Li , Chengdi Wang

Personalized treatment strategies for cancer frequently rely on the detection of genetic alterations which are determined by molecular biology assays. Historically, these processes typically required single-gene sequencing, next-generation sequencing, or visual inspection of histopathology slides by experienced pathologists in a clinical context. In the past decade, advances in artificial intelligence (AI) technologies have demonstrated remarkable potential in assisting physicians with accurate diagnosis of oncology image-recognition tasks. Meanwhile, AI techniques make it possible to integrate multimodal data such as radiology, histology, and genomics, providing critical guidance for the stratification of patients in the context of precision therapy. Given that the mutation detection is unaffordable and time-consuming for a considerable number of patients, predicting gene mutations based on routine clinical radiological scans or whole-slide images of tissue with AI-based methods has become a hot issue in actual clinical practice. In this review, we synthesized the general framework of multimodal integration (MMI) for molecular intelligent diagnostics beyond standard techniques. Then we summarized the emerging applications of AI in the prediction of mutational and molecular profiles of common cancers (lung, brain, breast, and other tumor types) pertaining to radiology and histology imaging. Furthermore, we concluded that there truly exist multiple challenges of AI techniques in the way of its real-world application in the medical field, including data curation, feature fusion, model interpretability, and practice regulations. Despite these challenges, we still prospect the clinical implementation of AI as a highly potential decision-support tool to aid oncologists in future cancer treatment management.

癌症的个性化治疗策略通常依赖于通过分子生物学测定确定的基因改变的检测。从历史上看,这些过程通常需要有经验的病理学家在临床环境中对组织病理学切片进行单基因测序、下一代测序或目视检查。在过去的十年里,人工智能(AI)技术的进步在帮助医生准确诊断肿瘤图像识别任务方面显示出了巨大的潜力。与此同时,人工智能技术使整合放射学、组织学和基因组学等多模式数据成为可能,为精准治疗背景下的患者分层提供了重要指导。鉴于突变检测对相当多的患者来说是负担不起且耗时的,使用基于人工智能的方法基于常规临床放射学扫描或组织全玻片图像预测基因突变已成为实际临床实践中的热点问题。在这篇综述中,我们综合了分子智能诊断的多模式集成(MMI)的一般框架,超越了标准技术。然后,我们总结了人工智能在预测与放射学和组织学成像相关的常见癌症(肺癌、脑癌、乳腺癌和其他肿瘤类型)的突变和分子谱方面的新兴应用。此外,我们得出结论,人工智能技术在医学领域的实际应用确实存在多重挑战,包括数据管理、特征融合、模型可解释性和实践规则。尽管存在这些挑战,我们仍然展望人工智能的临床实施,将其作为一种极具潜力的决策支持工具,帮助肿瘤学家进行未来癌症治疗管理。
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引用次数: 7
Obesity and immune-checkpoint inhibitors in advanced melanoma: A meta-analysis of survival outcomes from clinical studies 肥胖和免疫检查点抑制剂治疗晚期黑色素瘤:临床研究生存结果的荟萃分析
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-06-01 DOI: 10.1016/j.semcancer.2023.02.010
Gabriele Roccuzzo , Giovenale Moirano , Paolo Fava , Milena Maule , Simone Ribero , Pietro Quaglino

Obesity is a chronic inflammatory condition that has been associated with different types of cancer. However, its role in melanoma incidence, progression, and response to immune-checkpoint-inhibitors (ICI) is still controversial. On the one hand, increased levels of lipids and adipokines can promote tumor proliferation and several genes associated with fatty acid metabolism have been found to be upregulated in melanomas. On the other hand, immunotherapy seems to be more effective in obese animal models, presumably due to an increase in CD8 + and subsequent decrease in PD-1 + T-cells in the tumor microenvironment. In humans, several studies have investigated the role of BMI (body mass index) and other adiposity-related parameters as potential prognostic markers of survival in advanced melanoma patients treated with ICI. The aim of this research has been to systematically review the scientific literature on studies evaluating the relationship between overweight/obesity and survival outcomes in patients with advanced melanoma treated with ICI and to perform a meta-analysis on those sharing common characteristics. After screening 1070 records identified through a literature search, 18 articles assessing the role of BMI-related exposure in relation to survival outcomes in ICI-treated patients with advanced melanoma were included in our review. In the meta-analysis of the association between overweight (defined as BMI>25 or BMI 25–30), overall survival (OS), and progression free survival (PFS), 7 studies were included, yielding a summary HR of 0.87 (95% CI: 0.74–1.03) and 0.96 (95% CI: 0.86–1.08), respectively. Our results show that, despite few suggestive findings, the use of BMI as a valuable predictor of melanoma patients’ survival in terms of PFS and OS should not be currently recommended, due to the limited evidence available.

肥胖是一种慢性炎症性疾病,与不同类型的癌症有关。然而,它在黑色素瘤发病率、进展和对免疫检查点抑制剂(ICI)的反应中的作用仍然存在争议。一方面,脂质和脂肪因子水平的增加可以促进肿瘤增殖,并且已经发现与脂肪酸代谢相关的几个基因在黑色素瘤中上调。另一方面,免疫疗法似乎在肥胖动物模型中更有效,可能是由于肿瘤微环境中CD8+的增加和随后PD-1+T细胞的减少。在人类中,几项研究调查了BMI(体重指数)和其他肥胖相关参数作为ICI治疗的晚期黑色素瘤患者生存的潜在预后标志物的作用。本研究的目的是系统地回顾有关评估ICI治疗的晚期黑色素瘤患者超重/肥胖与生存结果之间关系的研究的科学文献,并对具有共同特征的患者进行荟萃分析。在筛选了通过文献检索确定的1070份记录后,我们的综述中纳入了18篇文章,评估了ICI治疗的晚期黑色素瘤患者中BMI相关暴露与生存结果的关系。在超重(定义为BMI>25或BMI 25-30)、总生存期(OS)和无进展生存期(PFS)之间关系的荟萃分析中,纳入了7项研究,得出的总HR分别为0.87(95%CI:0.74-1.03)和0.96(95%CI:0.86-1.08)。我们的研究结果表明,尽管很少有提示性发现,但由于现有证据有限,目前不建议将BMI作为黑色素瘤患者PFS和OS生存率的有价值预测指标。
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引用次数: 3
Towards artificial intelligence to multi-omics characterization of tumor heterogeneity in esophageal cancer 从人工智能到食管癌肿瘤异质性的多组学表征
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-06-01 DOI: 10.1016/j.semcancer.2023.02.009
Junyu Li , Lin Li , Peimeng You , Yiping Wei , Bin Xu

Esophageal cancer is a unique and complex heterogeneous malignancy, with substantial tumor heterogeneity: at the cellular levels, tumors are composed of tumor and stromal cellular components; at the genetic levels, they comprise genetically distinct tumor clones; at the phenotypic levels, cells in distinct microenvironmental niches acquire diverse phenotypic features. This heterogeneity affects almost every process of esophageal cancer progression from onset to metastases and recurrence, etc. Intertumoral and intratumoral heterogeneity are major obstacles in the treatment of esophageal cancer, but also offer the potential to manipulate the heterogeneity themselves as a new therapeutic strategy. The high-dimensional, multi-faceted characterization of genomics, epigenomics, transcriptomics, proteomics, metabonomics, etc. of esophageal cancer has opened novel horizons for dissecting tumor heterogeneity. Artificial intelligence especially machine learning and deep learning algorithms, are able to make decisive interpretations of data from multi-omics layers. To date, artificial intelligence has emerged as a promising computational tool for analyzing and dissecting esophageal patient-specific multi-omics data. This review provides a comprehensive review of tumor heterogeneity from a multi-omics perspective. Especially, we discuss the novel techniques single-cell sequencing and spatial transcriptomics, which have revolutionized our understanding of the cell compositions of esophageal cancer and allowed us to determine novel cell types. We focus on the latest advances in artificial intelligence in integrating multi-omics data of esophageal cancer. Artificial intelligence-based multi-omics data integration computational tools exert a key role in tumor heterogeneity assessment, which will potentially boost the development of precision oncology in esophageal cancer.

癌症是一种独特而复杂的异质性恶性肿瘤,具有显著的肿瘤异质性:在细胞水平上,肿瘤由肿瘤和间质细胞成分组成;在遗传水平上,它们包括遗传上不同的肿瘤克隆;在表型水平上,处于不同微环境位的细胞获得不同的表型特征。这种异质性几乎影响了癌症从发病到转移和复发的每一个进展过程。肿瘤间和肿瘤内的异质性是食管癌症治疗的主要障碍,但也提供了将异质性本身作为一种新的治疗策略的潜力。癌症基因组学、表观基因组学、转录组学、蛋白质组学、代谢组学等的高维、多方面特征为剖析肿瘤异质性开辟了新的视野。人工智能,特别是机器学习和深度学习算法,能够对多组学层的数据做出决定性的解释。迄今为止,人工智能已成为一种很有前途的计算工具,用于分析和解剖食道患者特异性的多组学数据。这篇综述从多组学的角度对肿瘤异质性进行了全面的综述。特别是,我们讨论了单细胞测序和空间转录组学的新技术,这些技术彻底改变了我们对食管癌症细胞组成的理解,并使我们能够确定新的细胞类型。我们关注人工智能在整合癌症多组学数据方面的最新进展。基于人工智能的多组学数据集成计算工具在肿瘤异质性评估中发挥着关键作用,这将有可能促进癌症食管精确肿瘤学的发展。
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引用次数: 2
The role of exercise in obesity-related cancers: Current evidence and biological mechanisms 运动在肥胖相关癌症中的作用:目前的证据和生物学机制
IF 14.5 1区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-06-01 DOI: 10.1016/j.semcancer.2023.02.008
Elisabeth A. Larson , Maria Dalamaga , Faidon Magkos

Cancer ranks among the five leading causes of death in almost all countries and has important repercussions for individual and public health, the healthcare system, and society in general. Obesity increases the incidence of many types of cancer, but growing evidence suggests that physical activity may decrease risk for developing a variety of obesity-related cancer types, and, in some cases, may improve cancer prognosis and mortality rates. This review summarizes recent evidence on the effect of physical activity on obesity-related cancer prevention and survival. For some cancers, including breast, colorectal, and endometrial cancer, there is strong evidence for a preventative effect of exercise, but for many others, including gallbladder and kidney cancer, and multiple myeloma, evidence is inconsistent or largely lacking. Though many potential mechanisms have been proposed to explain the onco-protective effect of exercise, including improved insulin sensitivity, alterations in sex hormone availability, improved immune function and inflammation, myokine secretion, and modulation of intracellular signaling at the level of AMP kinase, the exact mechanism(s) of action within each cancer subtype remains poorly defined. Overall, a deeper understanding of how exercise can help against cancer and of the exercise parameters that can be altered to optimize exercise prescription is necessary and should be the subject of future investigation.

癌症是几乎所有国家的五大主要死因之一,对个人和公共健康、医疗系统和整个社会都有重要影响。肥胖会增加许多类型癌症的发病率,但越来越多的证据表明,体育活动可以降低患各种肥胖相关癌症类型的风险,在某些情况下,还可以改善癌症的预后和死亡率。这篇综述总结了最近关于体育活动对肥胖相关癌症预防和生存的影响的证据。对于一些癌症,包括乳腺癌、结直肠癌和子宫内膜癌症,有强有力的证据表明运动具有预防作用,但对于许多其他癌症,包括癌症胆囊和肾脏,以及多发性骨髓瘤,证据不一致或基本缺乏。尽管已经提出了许多潜在的机制来解释运动的肿瘤保护作用,包括改善胰岛素敏感性、性激素可用性的改变、改善免疫功能和炎症、肌细胞因子分泌以及在AMP激酶水平上调节细胞内信号,每个癌症亚型的确切作用机制仍不明确。总的来说,有必要更深入地了解运动如何帮助对抗癌症,以及可以改变以优化运动处方的运动参数,这应该是未来研究的主题。
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引用次数: 4
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Seminars in cancer biology
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