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Biological, prognostic, and therapeutic impact of the epigenome in CLL 表观基因组对慢性淋巴细胞白血病的生物学、预后和治疗影响
IF 5 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-06-01 DOI: 10.1053/j.seminhematol.2023.11.005
Alba Maiques-Diaz , Jose Ignacio Martin-Subero

Chronic lymphocytic leukemia (CLL) is characterized by widespread alterations in the genetic and epigenetic landscapes which seem to underlie the variable clinical manifestations observed in patients. Over the last decade, epigenomic studies have described the whole-genome maps of DNA methylation and chromatin features of CLL and normal B cells, identifying distinct epigenetic mechanisms operating in tumoral cells. DNA methylation analyses have identified that the CLL methylome contains imprints of the cell of origin, as well as of the proliferative history of the tumor cells, with both being strong independent prognostic predictors. Moreover, single-cell analysis revealed a higher degree of DNA methylation noise in CLL cells, which associates with transcriptional plasticity and disease aggressiveness. Integrative analysis of chromatin has uncovered chromatin signatures, as well as regulatory regions specifically active in each CLL subtype or in Richter transformed samples. Unique transcription factor (TF) binding motifs are overrepresented on those regions, suggesting that altered TF networks operate from disease initiation to progression as nongenetic factors mediating the oncogenic transcriptional profiles. Multiomics analysis has identified that response to treatment is modulated by an epigenetic imprint, and that treatments affect chromatin through the activity of particular set of TFs. Additionally, the epigenome is an axis of therapeutic vulnerability in CLL, as it can be targeted by inhibitors of histone modifying enzymes, that have shown promising preclinical results. Altogether, this review aims at summarizing the major findings derived from published literature to distill how altered epigenomic mechanisms contribute to CLL origin, evolution, clinical behavior, and response to treatment.

慢性淋巴细胞白血病(CLL)的特点是遗传和表观遗传景观的广泛改变,这似乎是患者观察到的不同临床表现的基础。在过去的十年中,表观基因组研究描述了CLL和正常B细胞的DNA甲基化和染色质特征的全基因组图谱,确定了肿瘤细胞中不同的表观遗传机制。DNA甲基化分析已经确定,CLL甲基组包含起源细胞的印记,以及肿瘤细胞的增殖史,两者都是强大的独立预后预测因子。此外,单细胞分析显示,CLL细胞中存在较高程度的DNA甲基化噪声,这与转录可塑性和疾病侵袭性有关。染色质的综合分析揭示了染色质特征,以及在每个CLL亚型或Richter转化样品中特异性活跃的调控区域。独特的转录因子(TF)结合基序在这些区域中被过度代表,这表明改变的TF网络作为介导致癌转录谱的非遗传因素从疾病开始到进展起作用。多组学分析已经确定,对治疗的反应是由表观遗传印记调节的,并且治疗通过一组特定的tf的活性影响染色质。此外,表观基因组是CLL治疗脆弱性的一个轴,因为它可以被组蛋白修饰酶抑制剂靶向,这已经显示出有希望的临床前结果。总之,本综述旨在总结从已发表的文献中得出的主要发现,以提炼出改变的表观基因组机制如何促进CLL的起源、进化、临床行为和对治疗的反应。
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引用次数: 0
Updates on the biology of chronic lymphocytic leukemia: introductory editorial 慢性淋巴细胞白血病生物学的最新进展:介绍性社论。
IF 5 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-06-01 DOI: 10.1053/j.seminhematol.2024.06.001
Elisa ten Hacken PhD , Barbara Eichhorst MD
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引用次数: 0
Lessons learned from the Eµ-TCL1 mouse model of CLL 从 Eµ-TCL1 CLL 小鼠模型中汲取的经验教训
IF 5 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-06-01 DOI: 10.1053/j.seminhematol.2024.05.002
Alessia Floerchinger , Martina Seiffert

The Eµ-TCL1 mouse model has been used for over 20 years to study the pathobiology of chronic lymphocytic leukemia (CLL) and for preclinical testing of novel therapies. A CLL-like disease develops with increasing age in these mice due to a B cell specific overexpression of human TCL1. The reliability of this model to mirror human CLL is controversially discussed, as none of the known driver mutations identified in patients are found in Eµ-TCL1 mice. It has to be acknowledged that this mouse model was key to develop targeted therapies that aim at inhibiting the constitutive B cell receptor (BCR) signaling, a main driver of CLL. Inhibitors of BCR signaling became standard-of-care for a large proportion of patients with CLL as they are highly effective. The Eµ-TCL1 model further advanced our understanding of CLL biology owed to studies that crossed this mouse line with various transgenic mouse models and demonstrated the relevance of CLL-cell intrinsic and -extrinsic drivers of disease. These studies were instrumental in showing the relevance of the tumor microenvironment in the lymphoid tissues for disease progression and immune escape in CLL. It became clear that CLL cells shape and rely on stromal and immune cells, and that immune suppressive mechanisms and T cell exhaustion contribute to CLL progression. Based on this knowledge, new immunotherapy strategies were clinically tested for CLL, but so far with disappointing results. As some of these therapies were effective in the Eµ-TCL1 mouse model, the question arose concerning the translatability of preclinical studies in these mice. The aim of this review is to summarize lessons we have learnt over the last decades by studying CLL-like disease in the Eµ-TCL1 mouse model. The article focuses on pitfalls and limitations of the model, as well as the gained knowledge and potential of using this model for the development of novel treatment strategies to achieve the goal of curing patients with CLL.

20 多年来,Eµ-TCL1 小鼠模型一直被用于研究慢性淋巴细胞白血病(CLL)的病理生物学以及新型疗法的临床前测试。由于人类 TCL1 的 B 细胞特异性过表达,这些小鼠随着年龄的增长会出现类似 CLL 的疾病。由于在 Eµ-TCL1 小鼠中没有发现在患者身上发现的已知驱动突变,因此该模型反映人类 CLL 的可靠性备受争议。必须承认的是,这种小鼠模型是开发靶向疗法的关键,这些疗法旨在抑制构成型 B 细胞受体(BCR)信号传导,这是导致 CLL 的主要驱动因素。BCR信号抑制剂由于疗效显著,已成为大部分 CLL 患者的标准疗法。Eµ-TCL1模型进一步推进了我们对CLL生物学的了解,这归功于将该小鼠品系与各种转基因小鼠模型进行交叉研究,并证明了CLL细胞内在和外在疾病驱动因素的相关性。这些研究有助于显示淋巴组织中的肿瘤微环境与 CLL 疾病进展和免疫逃逸的相关性。人们清楚地认识到,CLL 细胞塑造并依赖于基质细胞和免疫细胞,免疫抑制机制和 T 细胞衰竭导致了 CLL 的进展。基于这一认识,针对 CLL 的新免疫疗法策略开始进行临床试验,但迄今为止结果令人失望。由于其中一些疗法在 Eµ-TCL1 小鼠模型中有效,因此出现了在这些小鼠中进行临床前研究的可转化性问题。本综述旨在总结我们过去几十年在 Eµ-TCL1 小鼠模型中研究 CLL 类疾病的经验教训。文章的重点是该模型的缺陷和局限性,以及利用该模型开发新型治疗策略以实现治愈 CLL 患者的目标所获得的知识和潜力。
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引用次数: 0
The complexities of T-cell dysfunction in chronic lymphocytic leukemia 慢性淋巴细胞白血病中 T 细胞功能障碍的复杂性。
IF 5 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-06-01 DOI: 10.1053/j.seminhematol.2024.04.001
Elena Camerini , Derk Amsen , Arnon P. Kater , Fleur S. Peters

Chronic lymphocytic leukemia (CLL) is a B-cell malignancy characterized by profound alterations and defects in the T-cell compartment. This observation has gained renewed interest as T-cell treatment strategies, which are successfully applied in more aggressive B-cell malignancies, have yielded disappointing results in CLL. Despite ongoing efforts to understand and address the observed T-cell defects, the exact mechanisms and nature underlying this dysfunction remain largely unknown. In this review, we examine the supporting signals from T cells to CLL cells in the lymph node niche, summarize key findings on T-cell functional defects, delve into potential underlying causes, and explore novel strategies for reversing these deficiencies. Our goal is to identify strategies aimed at resolving CLL-induced T-cell dysfunction which, in the future, will enhance the efficacy of autologous T-cell-based therapies for CLL patients.

慢性淋巴细胞白血病(CLL)是一种 B 细胞恶性肿瘤,其特点是 T 细胞区发生深刻的改变和缺陷。T细胞治疗策略成功地应用于侵袭性更强的B细胞恶性肿瘤,但在CLL中的治疗效果却令人失望,因此这一观察结果再次引起了人们的兴趣。尽管人们一直在努力了解和解决所观察到的 T 细胞缺陷,但这种功能障碍的确切机制和性质在很大程度上仍不为人所知。在这篇综述中,我们研究了淋巴结龛中从 T 细胞到 CLL 细胞的支持信号,总结了有关 T 细胞功能缺陷的主要发现,深入探讨了潜在的根本原因,并探索了逆转这些缺陷的新策略。我们的目标是找出旨在解决CLL诱导的T细胞功能障碍的策略,从而在未来提高CLL患者自体T细胞疗法的疗效。
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引用次数: 0
Metabolic reprogramming in the CLL TME; potential for new therapeutic targets CLL TME 中的代谢重编程;新治疗靶点的潜力
IF 5 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-06-01 DOI: 10.1053/j.seminhematol.2024.02.001
Helga Simon-Molas , Chiara Montironi , Anna Kabanova , Eric Eldering

Chronic lymphocytic leukemia (CLL) cells circulate between peripheral (PB) blood and lymph node (LN) compartments, and strictly depend on microenvironmental factors for proliferation, survival and drug resistance. All cancer cells display metabolic reprogramming and CLL is no exception – though the inert status of the PB CLL cells has hampered detailed insight into these processes. We summarize previous work on reactive oxygen species (ROS), oxidative stress, and hypoxia, as well as the important roles of Myc, and PI3K/Akt/mTor pathways. In vitro co-culture systems and gene expression analyses have provided a partial picture of CLL LN metabolism. New broad omics techniques allow to obtain molecular and also single-cell level understanding of CLL plasticity and metabolic reprogramming. We summarize recent developments and describe the new concept of glutamine addiction for CLL, which may hold therapeutic promise.

慢性淋巴细胞白血病(CLL)细胞在外周血(PB)和淋巴结(LN)之间循环,其增殖、存活和耐药性严格依赖于微环境因素。所有癌细胞都会进行代谢重编程,CLL 也不例外--尽管 PB CLL 细胞的惰性状态阻碍了对这些过程的详细了解。我们总结了以前在活性氧(ROS)、氧化应激和缺氧方面的工作,以及 Myc 和 PI3K/Akt/mTor 通路的重要作用。体外共培养系统和基因表达分析提供了 CLL LN 代谢的部分情况。新的全息技术可从分子和单细胞层面了解 CLL 的可塑性和代谢重编程。我们总结了最近的研究进展,并描述了CLL谷氨酰胺成瘾的新概念,这可能具有治疗前景。
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引用次数: 0
Targeting the B cell receptor signaling pathway in chronic lymphocytic leukemia 靶向慢性淋巴细胞白血病中的 B 细胞受体信号通路
IF 3.6 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-04-01 DOI: 10.1053/j.seminhematol.2024.04.002
John T. Patton, Jennifer A. Woyach

Aberrant signal transduction through the B cell receptor (BCR) plays a critical role in the pathogenesis of chronic lymphocytic leukemia (CLL)/small lymphocytic lymphoma (SLL). BCR-dependent signaling is necessary for the growth and survival of neoplastic cells, making inhibition of down-stream pathways a logical therapeutic strategy. Indeed, selective inhibitors against Bruton's tyrosine kinase (BTK) and phosphoinositide 3-kinase (PI3K) have been shown to induce high rates of response in CLL and other B cell lymphomas. In particular, the development of BTK inhibitors revolutionized the treatment approach to CLL, demonstrating long-term efficacy. While BTK inhibitors are widely used for multiple lines of treatment, PI3K inhibitors are much less commonly utilized, mainly due to toxicities. CLL remains an incurable disease and effective treatment options after relapse or development of TKI resistance are greatly needed. This review provides an overview of BCR signaling, a summary of the current therapeutic landscape, and a discussion of the ongoing trials targeting BCR-associated kinases.

通过 B 细胞受体(BCR)的异常信号转导在慢性淋巴细胞白血病(CLL)/小淋巴细胞淋巴瘤(SLL)的发病机制中起着至关重要的作用。依赖 BCR 的信号传导是肿瘤细胞生长和存活的必要条件,因此抑制下游通路成为一种合理的治疗策略。事实上,针对布鲁顿酪氨酸激酶(BTK)和磷酸肌酸 3-激酶(PI3K)的选择性抑制剂已被证明能在 CLL 和其他 B 细胞淋巴瘤中产生高应答率。特别是 BTK 抑制剂的开发彻底改变了 CLL 的治疗方法,并显示出长期疗效。虽然 BTK 抑制剂被广泛用于多线治疗,但 PI3K 抑制剂的使用却少得多,主要原因是其毒性。CLL仍是一种无法治愈的疾病,复发或出现TKI耐药后亟需有效的治疗方案。本综述概述了 BCR 信号传导,总结了当前的治疗方案,并讨论了正在进行的针对 BCR 相关激酶的试验。
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引用次数: 0
B-cell receptor immunoglobulin stereotypy in chronic lymphocytic leukemia: Key to understanding disease biology and stratifying patients 慢性淋巴细胞白血病的 B 细胞受体免疫球蛋白定型:了解疾病生物学和对患者进行分层的关键
IF 3.6 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-04-01 DOI: 10.1053/j.seminhematol.2023.12.005
Andreas Agathangelidis , Thomas Chatzikonstantinou , Kostas Stamatopoulos

Sequence convergence, otherwise stereotypy, of B-cell receptor immunoglobulin (BcR IG) from unrelated patients is a distinctive feature of the IG gene repertoire in chronic lymphocytic leukemia (CLL) whereby patients expressing a particular BcR IG archetype are classified into groups termed stereotyped subsets. From a biological perspective, the fact that a considerable fraction (∼41%) of patients with CLL express (quasi)identical or stereotyped BcR IG underscores the key role of antigen selection in the natural history of CLL. From a clinical perspective, at odds with the pronounced heterogeneity of CLL at large, patients belonging to the same stereotyped subset display consistent clinical presentation and outcome, including response to treatment, likely as a reflection of consistent biological background. Many major stereotyped subsets were recently shown to have satellites, that is, smaller subsets that are immunogenetically similar. Preliminary evidence supports that this similarity extends to shared biological and even clinical features, with important implications for patient stratification. Consequently, BcR IG stereotypy emerges as a powerful tool for dissecting the heterogeneity of CLL toward refined risk stratification and, eventually, more precise therapeutic interventions.

来自非亲属患者的 B 细胞受体免疫球蛋白(BcR IG)的序列趋同(或称为定型)是慢性淋巴细胞白血病(CLL)IG 基因组的一个显著特点,表达特定 BcR IG 原型的患者被归入称为定型亚组的群体。从生物学角度看,相当一部分(41%)CLL 患者表达(准)相同或定型的 BcR IG,这一事实强调了抗原选择在 CLL 自然史中的关键作用。从临床角度看,与整个 CLL 的明显异质性不同,属于同一定型亚组的患者显示出一致的临床表现和结果,包括对治疗的反应,这可能是一致的生物学背景的反映。最近的研究表明,许多主要的定型亚群都有卫星群,即免疫原性相似的较小亚群。初步证据表明,这种相似性延伸到了共同的生物学甚至临床特征,对患者分层具有重要意义。因此,BcR IG定型成为一种强大的工具,可用于剖析CLL的异质性,从而进行精细的风险分层,最终实现更精确的治疗干预。
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引用次数: 0
Therapeutic targeting of apoptosis in chronic lymphocytic leukemia 针对慢性淋巴细胞白血病细胞凋亡的治疗方法
IF 3.6 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-04-01 DOI: 10.1053/j.seminhematol.2024.01.015
Inhye E. Ahn, Matthew S. Davids

Therapeutic targeting of apoptosis with small molecule B-cell lymphoma 2 (BCL-2) inhibition with venetoclax is highly efficacious in CLL, leading to sustained deep responses, particularly among patients with treatment-naïve disease with favorable prognostic markers. Patients with unfavorable genetic characteristics such as TP53 aberration and unmutated IGHV may also derive durable benefits, but their remission duration after time-limited venetoclax-containing combination therapy is shorter, particularly in patients with relapsed/refractory disease. Emerging data indicate that the context of disease progression after initial treatment with venetoclax may define the success of re-treatment with venetoclax. Specifically, continuous venetoclax exposure may select for resistant disease due to genetic mechanisms such as BCL2 mutations and functional resistance mechanisms such as hyperphosphorylation of BCL-2 family proteins, which decrease the affinity of venetoclax binding to the target or lead to increased MCL-1 dependence and concomitant decrease in BCL-2 dependence. These patients may be best served by switching to a different class of targeted agents at the time of progression. In contrast, relapsed CLL that arises while being off therapy after a period of time-limited venetoclax-based regimens maintains sensitivity to re-treatment with venetoclax for the majority of patients. Novel strategies related to therapeutic targeting of apoptosis include next-generation BCL-2 inhibitors with improved potency and pharmacokinetic profiles, direct targeting of anti-apoptotic BH3 family proteins beyond BCL-2 such as MCL-1, and indirect targeting of MCL-1 through mechanisms such as small molecule cyclin-dependent kinase 9 inhibitors.

用小分子 B 细胞淋巴瘤 2(BCL-2)抑制剂 Venetoclax 靶向治疗细胞凋亡对 CLL 非常有效,可产生持续的深度反应,尤其是在预后指标良好的治疗无效患者中。具有TP53畸变和IGHV未突变等不利遗传特征的患者也可能获得持久的疗效,但他们在接受含venetoclax的限时联合疗法后的缓解持续时间较短,尤其是在复发/难治性疾病患者中。新的数据表明,首次使用文尼氯雷治疗后疾病进展的情况可能决定了再次使用文尼氯雷治疗的成功与否。具体来说,由于BCL2突变等遗传机制和BCL-2家族蛋白过度磷酸化等功能性耐药机制降低了venetoclax与靶点结合的亲和力,或导致MCL-1依赖性增加,同时BCL-2依赖性降低,因此持续暴露于venetoclax可能会选择耐药疾病。这些患者最好在病情进展时换用另一类靶向药物。与此相反,对于大多数患者来说,在停用基于 Venetoclax 的限时治疗方案一段时间后复发的 CLL 仍能保持对 Venetoclax 再治疗的敏感性。与针对细胞凋亡的治疗相关的新策略包括:药效和药代动力学特征得到改善的新一代 BCL-2 抑制剂;直接针对 BCL-2 以外的抗凋亡 BH3 家族蛋白(如 MCL-1);以及通过小分子细胞周期蛋白依赖性激酶 9 抑制剂等机制间接针对 MCL-1。
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引用次数: 0
Prognostication in chronic lymphocytic leukemia 慢性淋巴细胞白血病的预后
IF 3.6 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-04-01 DOI: 10.1053/j.seminhematol.2024.02.002
Riccardo Moia, Gianluca Gaidano

Chronic lymphocytic leukemia (CLL) is the most common type of leukemia in Western countries. CLL is a highly heterogeneous disease: some patients may never require therapy and others relapse several times after different therapeutic strategies. Therefore, in CLL, prognostic markers are essential to capture high-risk patients for different clinical endpoints including early treatment requirement, early progression after BTK or BCL2 inhibitors and Richter transformation. In early stage CLL, different biological and clinical biomarkers have been identified to predict time to treatment requirement that could be used to identify the most appropriate population for early intervention clinical trial. However, at the moment, the standard of care for early stage CLL remains watch & wait since no survival benefit has been identified in clinical trials with chemoimmunotherapy and with BTK inhibitors. In patients requiring treatment TP53 disruptions identify high-risk patients who benefit the most from long-term continuous therapy with BTKi. On the opposite side of the spectrum, IGHV mutated patients devoid of TP53 disruption benefit the most from fixed-duration therapy with venetoclax-obinutuzumab. In between, the highly heterogenous subgroup of patients with IGHV unmutated genes represents the group in which further efforts are needed to identify additional prognostic biomarkers aimed at selecting patients who can benefit from fixed-duration and patients who can benefit from long term BTKi therapy. In the context of the aggressive transformation of CLL, namely Richter syndrome, the clonal relationship to the CLL counterpart represents the strongest prognostic biomarker. Clonally related Richter syndrome still represents an unmet clinical need which requires further efforts to identify new therapeutic strategies.

慢性淋巴细胞白血病(CLL)是西方国家最常见的白血病类型。慢性淋巴细胞白血病是一种高度异质性疾病:一些患者可能永远不需要治疗,而另一些患者则会在不同的治疗策略后多次复发。因此,在 CLL 中,预后标志物对于捕捉不同临床终点(包括早期治疗需求、BTK 或 BCL2 抑制剂后的早期进展以及里氏转化)的高危患者至关重要。
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引用次数: 0
Vaccinations in patients with chronic lymphocytic leukemia 慢性淋巴细胞白血病患者的疫苗接种
IF 3.6 3区 医学 Q1 HEMATOLOGY Pub Date : 2024-04-01 DOI: 10.1053/j.seminhematol.2024.01.003
Elizabeth R. Francis , Jennifer Vu , Catherine Ostos Perez , Clare Sun

Chronic lymphocytic leukemia (CLL) is characterized by immune dysfunction resulting in heightened susceptibility to infections and elevated rates of morbidity and mortality. A key strategy to mitigate infection-related complications has been immunization against common pathogens. However, the immunocompromised status of CLL patients poses challenges in eliciting an adequate humoral and cellular immune response to vaccination. Most CLL-directed therapy disproportionately impairs humoral immunity. Vaccine responsiveness also depends on the phase and type of immune response triggered by immunization. In this review, we discuss the immune dysfunction, vaccine responsiveness, and considerations for optimizing vaccine response in patients with CLL.

慢性淋巴细胞白血病(CLL)的特点是免疫功能失调,导致感染易感性增加,发病率和死亡率升高。减轻感染相关并发症的关键策略是对常见病原体进行免疫接种。然而,CLL 患者的免疫功能低下状况给疫苗接种引起足够的体液和细胞免疫反应带来了挑战。大多数慢性淋巴细胞白血病的定向治疗会不成比例地损害体液免疫。疫苗反应性还取决于免疫接种引发的免疫反应的阶段和类型。在本综述中,我们将讨论免疫功能障碍、疫苗反应性以及优化 CLL 患者疫苗反应的注意事项。
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引用次数: 0
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Seminars in hematology
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