Seed dormancy is an important trait associated with pre-sprouting and malting quality in barley. Genome-wide association studies (GWASs) have been used to detect quantitative trait loci (QTLs) underlying complex traits in major crops. In the present study, we collected 295 barley (Hordeum vulgare L.) accessions from Australia, Europe, Canada and China. A total of 25,179 single nucleotide polymorphism (SNP)/diversity arrays technology sequence markers were used for population structure, linkage disequilibrium and GWAS analysis. Candidate genes within QTL regions were investigated, and their expression levels were analysed using RNAseq data. Five QTLs for seed dormancy were identified. One QTL was mapped on chromosome 1H, and one QTL was mapped on chromosome 4H, while three QTLs were located on chromosome 5H. This is the first report of a QTL on the short arm of chromosome 5H in barley. Molecular markers linked to the QTL can be used for marker-assisted selection in barley breeding programmes.
{"title":"Genome-wide association study on seed dormancy in barley","authors":"Gaofeng Zhou, Lee-Anne McFawn, Xiao-qi Zhang, Tefera Tolera Angessa, Sharon Westcott, Chengdao Li","doi":"10.1017/s0960258524000114","DOIUrl":"https://doi.org/10.1017/s0960258524000114","url":null,"abstract":"<p>Seed dormancy is an important trait associated with pre-sprouting and malting quality in barley. Genome-wide association studies (GWASs) have been used to detect quantitative trait loci (QTLs) underlying complex traits in major crops. In the present study, we collected 295 barley (<span>Hordeum vulgare</span> L.) accessions from Australia, Europe, Canada and China. A total of 25,179 single nucleotide polymorphism (SNP)/diversity arrays technology sequence markers were used for population structure, linkage disequilibrium and GWAS analysis. Candidate genes within QTL regions were investigated, and their expression levels were analysed using RNAseq data. Five QTLs for seed dormancy were identified. One QTL was mapped on chromosome 1H, and one QTL was mapped on chromosome 4H, while three QTLs were located on chromosome 5H. This is the first report of a QTL on the short arm of chromosome 5H in barley. Molecular markers linked to the QTL can be used for marker-assisted selection in barley breeding programmes.</p>","PeriodicalId":21711,"journal":{"name":"Seed Science Research","volume":"19 6 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-04-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140814794","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-24DOI: 10.1017/s0960258524000102
Emmanuel N. Chidumayo
Time-separated seed collections with a separation period of 12–18 years were used to study recent changes in germination traits and the role of climate factors in seven tropical dry forest (TDF) woody species in Zambia, southern Africa. In all the species, peak and final germination were lower in recent (2016–2021) seed collections than in historic (1998–2005) seed collections during the first germination season. However, in species with seed dormancy, both peak and final germination after one year burial were higher in recent seed collections than in historic seed collections. Three monthly climate factors had significant effects on final germination in the different species and the timing of most of these factors was during seed development and ripening that suggest that these factors operated through mother plants. In species with seed dormancy, post-first-year germination of buried seeds responded to climate factors in the regeneration niche. Climate factors that significantly affected germination included those that changed over the separation period between historic and recent seed collections. This indicates that short-time climatic changes may have the potential to impact germination in TDF woody species of southern Africa. The germination responses to climate factors were both positive and negative and it is not clear whether these are adaptations or not. Further research is required to assess the adaptive significance of these changes in germination traits in TDF species of southern Africa.
{"title":"Differences in germination traits of time-separated seed collections of dry forest species from Central Zambia and the potential role of climate","authors":"Emmanuel N. Chidumayo","doi":"10.1017/s0960258524000102","DOIUrl":"https://doi.org/10.1017/s0960258524000102","url":null,"abstract":"<p>Time-separated seed collections with a separation period of 12–18 years were used to study recent changes in germination traits and the role of climate factors in seven tropical dry forest (TDF) woody species in Zambia, southern Africa. In all the species, peak and final germination were lower in recent (2016–2021) seed collections than in historic (1998–2005) seed collections during the first germination season. However, in species with seed dormancy, both peak and final germination after one year burial were higher in recent seed collections than in historic seed collections. Three monthly climate factors had significant effects on final germination in the different species and the timing of most of these factors was during seed development and ripening that suggest that these factors operated through mother plants. In species with seed dormancy, post-first-year germination of buried seeds responded to climate factors in the regeneration niche. Climate factors that significantly affected germination included those that changed over the separation period between historic and recent seed collections. This indicates that short-time climatic changes may have the potential to impact germination in TDF woody species of southern Africa. The germination responses to climate factors were both positive and negative and it is not clear whether these are adaptations or not. Further research is required to assess the adaptive significance of these changes in germination traits in TDF species of southern Africa.</p>","PeriodicalId":21711,"journal":{"name":"Seed Science Research","volume":"21 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-04-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140640115","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-22DOI: 10.1017/s0960258524000096
Alexandra E. Seglias, Michelle DePrenger-Levin
Alpine plant species are particularly vulnerable to climate change. Temperature fluctuations are projected to be most severe at high elevations. Even small shifts in temperature have major consequences on phenology, reproduction, and community composition. Early life stages are arguably the most important processes in the fitness of an individual plant and the dynamics and persistence of plant populations. These initial developmental stages are expected to be more vulnerable to changes in climate than adult life stages. To understand how early life stages of alpine plant species will respond to warming temperatures, seeds and seedlings of two species were exposed to three different temperature regimes. Temperatures were based on current and projected conditions under low and high emission scenarios. Two rare alpine species performed better under warmer temperatures at both the germination and seedling stages. The results show that early life stages of alpine plants may not be at high risk from warming temperatures; however, there are many other shifting climatic factors to consider, resulting from climate change beyond temperature alone.
{"title":"Can alpine species take the heat? Impacts of increased temperatures on early life stages","authors":"Alexandra E. Seglias, Michelle DePrenger-Levin","doi":"10.1017/s0960258524000096","DOIUrl":"https://doi.org/10.1017/s0960258524000096","url":null,"abstract":"<p>Alpine plant species are particularly vulnerable to climate change. Temperature fluctuations are projected to be most severe at high elevations. Even small shifts in temperature have major consequences on phenology, reproduction, and community composition. Early life stages are arguably the most important processes in the fitness of an individual plant and the dynamics and persistence of plant populations. These initial developmental stages are expected to be more vulnerable to changes in climate than adult life stages. To understand how early life stages of alpine plant species will respond to warming temperatures, seeds and seedlings of two species were exposed to three different temperature regimes. Temperatures were based on current and projected conditions under low and high emission scenarios. Two rare alpine species performed better under warmer temperatures at both the germination and seedling stages. The results show that early life stages of alpine plants may not be at high risk from warming temperatures; however, there are many other shifting climatic factors to consider, resulting from climate change beyond temperature alone.</p>","PeriodicalId":21711,"journal":{"name":"Seed Science Research","volume":"114 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-04-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140632133","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-15DOI: 10.1017/s0960258524000011
David A. Guzmán-Hernández, Claudia Barbosa-Martínez, Juan M. Villa-Hernández, Laura J. Pérez-Flores
This work provides insights into the deterioration of cacti seeds of Escontria chiotilla (F.A.C. Weber ex K. Schum) and Stenocereus pruinosus (Otto ex Pfeiff.) Buxbaum stored ex situ at 25 °C, under dry and dark conditions or buried in situ conditions in a xerophytic shrubland. Viability, germination speed, electrolyte leakage and indicators of the redox balance including glutathione content, glutathione half-cell reduction potential (EGSSG/2GSH) and malondialdehyde (MDA), oxidized protein content, together with water-soluble antioxidant enzyme activity were assessed. Over a period of two years of storage, viability was maintained when seeds were stored ex situ at 7–9% water content compared to seeds buried in the soil. A second burial experiment showed that seeds of E. chiotilla maintained viability during a year of storage that included a rainy season followed by a dry season. Thereafter, they died rapidly during the second rainy season. In contrast, those of S. pruinosus started to lose viability after 6 months of burial at the end of the rainy season and were mostly dead at the end of the dry season. This difference in persistence between species was related to a difference in the glutathione content and antioxidant enzyme activities. In both storage experiments, the loss of viability of both species was associated to a EGSSG/2GSH shift to a more oxidative state during burial. Yet, contents in MDA and oxidized soluble proteins were not related to redox imbalance and loss of viability, indicating that these compounds are not good markers of oxidative stress in cacti seeds during storage.
这项研究深入探讨了仙人掌种子 Escontria chiotilla (F.A.C. Weber ex K. Schum) 和 Stenocereus pruinosus (Otto ex Pfeiff.) Buxbaum 在 25 °C、干燥和黑暗条件下原地贮藏或在干旱灌木林中原地埋藏的退化情况。评估了活力、发芽速度、电解质渗漏和氧化还原平衡指标,包括谷胱甘肽含量、谷胱甘肽半电池还原电位(ESSG/2GSH)和丙二醛(MDA)、氧化蛋白质含量以及水溶性抗氧化酶活性。与埋在土壤中的种子相比,在含水量为 7-9% 的条件下原地贮藏的种子在两年的贮藏期内保持了活力。第二次埋藏实验表明,蚕豆种子在包括雨季和旱季在内的一年贮藏期间保持了活力。此后,它们在第二个雨季迅速死亡。相比之下,S. pruinosus 的种子在雨季结束时埋藏 6 个月后开始失去活力,在旱季结束时大部分死亡。物种间存活率的差异与谷胱甘肽含量和抗氧化酶活性的差异有关。在两次贮藏实验中,两个物种活力的丧失都与掩埋过程中 EGSSG/2GSH 转向更氧化的状态有关。然而,MDA 和氧化可溶性蛋白的含量与氧化还原失衡和活力丧失无关,这表明这些化合物不是仙人掌种子在贮藏期间氧化应激的良好标记。
{"title":"Redox imbalance accompanies loss of viability in seeds of two cacti species buried in situ","authors":"David A. Guzmán-Hernández, Claudia Barbosa-Martínez, Juan M. Villa-Hernández, Laura J. Pérez-Flores","doi":"10.1017/s0960258524000011","DOIUrl":"https://doi.org/10.1017/s0960258524000011","url":null,"abstract":"<p>This work provides insights into the deterioration of cacti seeds of <span>Escontria chiotilla</span> (F.A.C. Weber ex K. Schum) and <span>Stenocereus pruinosus</span> (Otto ex Pfeiff.) Buxbaum stored <span>ex situ</span> at 25 °C, under dry and dark conditions or buried <span>in situ</span> conditions in a xerophytic shrubland. Viability, germination speed, electrolyte leakage and indicators of the redox balance including glutathione content, glutathione half-cell reduction potential (E<span>GSSG/2GSH</span>) and malondialdehyde (MDA), oxidized protein content, together with water-soluble antioxidant enzyme activity were assessed. Over a period of two years of storage, viability was maintained when seeds were stored <span>ex situ</span> at 7–9% water content compared to seeds buried in the soil. A second burial experiment showed that seeds of <span>E. chiotilla</span> maintained viability during a year of storage that included a rainy season followed by a dry season. Thereafter, they died rapidly during the second rainy season. In contrast, those of <span>S. pruinosus</span> started to lose viability after 6 months of burial at the end of the rainy season and were mostly dead at the end of the dry season. This difference in persistence between species was related to a difference in the glutathione content and antioxidant enzyme activities. In both storage experiments, the loss of viability of both species was associated to a E<span>GSSG/2GSH</span> shift to a more oxidative state during burial. Yet, contents in MDA and oxidized soluble proteins were not related to redox imbalance and loss of viability, indicating that these compounds are not good markers of oxidative stress in cacti seeds during storage.</p>","PeriodicalId":21711,"journal":{"name":"Seed Science Research","volume":"24 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-04-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140553481","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-15DOI: 10.1017/s0960258524000060
Chen Yin Peng, Yu Wu, Wen Hui Huang, Zhi Yun Deng, Xiao Rui Sun, Ming Zhu Wang, Hugh W. Pritchard, Yong Bao Shen, Jin Ya Xu, Xiang Yu Yu, Cong Cong Guo
The assessment of seed quality and physiological potential is essential in seed production and crop breeding. In the process of rapid detection of seed viability using tetrazolium (TZ) staining, it is necessary to spend a lot of labour and material resources to explore the pretreatment and staining methods of hard and solid seeds with physical barriers. This study explores the TZ staining methods of six hard seeds (Tilia miqueliana, Tilia henryana, Sassafras tzumu, Prunus subhirtella, Prunus sibirica, and Juglans mandshurica) and summarizes the TZ staining conditions required for hard seeds by combining the difference in fat content between seeds and the kinship between species, thus providing a rapid viability test method for the protection of germplasm resources of endangered plants and the optimization of seed bank construction. The TZ staining of six species of hard seeds requires a staining temperature above 35 °C and a TZ solution concentration higher than 1%. Endospermic seeds require shorter staining times than exalbuminous seeds. The higher the fat content of the seeds, the lower the required incubation temperature and TZ concentration for staining, and the longer the staining time. And the closer the relationship between the two species, the more similar their staining conditions become. The TZ staining method of similar species can be predicted according to the genetic distance between the phylogenetic trees, and the viability of new species can be detected quickly.
{"title":"Phylogenetic trends in TZ staining analysis of six deep dormancy seeds","authors":"Chen Yin Peng, Yu Wu, Wen Hui Huang, Zhi Yun Deng, Xiao Rui Sun, Ming Zhu Wang, Hugh W. Pritchard, Yong Bao Shen, Jin Ya Xu, Xiang Yu Yu, Cong Cong Guo","doi":"10.1017/s0960258524000060","DOIUrl":"https://doi.org/10.1017/s0960258524000060","url":null,"abstract":"<p>The assessment of seed quality and physiological potential is essential in seed production and crop breeding. In the process of rapid detection of seed viability using tetrazolium (TZ) staining, it is necessary to spend a lot of labour and material resources to explore the pretreatment and staining methods of hard and solid seeds with physical barriers. This study explores the TZ staining methods of six hard seeds (<span>Tilia miqueliana</span>, <span>Tilia henryana, Sassafras tzumu</span>, <span>Prunus subhirtella</span>, <span>Prunus sibirica</span>, and <span>Juglans mandshurica</span>) and summarizes the TZ staining conditions required for hard seeds by combining the difference in fat content between seeds and the kinship between species, thus providing a rapid viability test method for the protection of germplasm resources of endangered plants and the optimization of seed bank construction. The TZ staining of six species of hard seeds requires a staining temperature above 35 °C and a TZ solution concentration higher than 1%. Endospermic seeds require shorter staining times than exalbuminous seeds. The higher the fat content of the seeds, the lower the required incubation temperature and TZ concentration for staining, and the longer the staining time. And the closer the relationship between the two species, the more similar their staining conditions become. The TZ staining method of similar species can be predicted according to the genetic distance between the phylogenetic trees, and the viability of new species can be detected quickly.</p>","PeriodicalId":21711,"journal":{"name":"Seed Science Research","volume":"37 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-04-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140553647","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-02DOI: 10.1017/s0960258524000023
Yongha Rhie, Soyeon Lee, Hohsuk Noh
The germination percentage (GP) is commonly employed to estimate the viability of a seed population. Statistical methods such as analysis of variance (ANOVA) and logistic regression are frequently used to analyse GP data. While ANOVA has a long history of usage, logistic regression is considered more suitable for GP data due to its binomial nature. However, both methods have inherent issues that require attention. In this study, we address previously unexplored challenges associated with these methods and propose the utilization of a likelihood ratio test as a solution. We demonstrate the advantages of employing the likelihood ratio test for GP data analysis through simulations and real data analysis.
发芽率(GP)通常用于估算种子群体的存活率。方差分析 (ANOVA) 和逻辑回归等统计方法常用于分析 GP 数据。方差分析的使用历史悠久,而逻辑回归因其二项式性质被认为更适合 GP 数据。然而,这两种方法都有需要注意的固有问题。在本研究中,我们探讨了与这些方法相关的以前未曾探讨过的难题,并提出了使用似然比检验作为解决方案的建议。我们通过模拟和实际数据分析证明了在 GP 数据分析中使用似然比检验的优势。
{"title":"Likelihood ratio test for the analysis of germination percentages","authors":"Yongha Rhie, Soyeon Lee, Hohsuk Noh","doi":"10.1017/s0960258524000023","DOIUrl":"https://doi.org/10.1017/s0960258524000023","url":null,"abstract":"The germination percentage (GP) is commonly employed to estimate the viability of a seed population. Statistical methods such as analysis of variance (ANOVA) and logistic regression are frequently used to analyse GP data. While ANOVA has a long history of usage, logistic regression is considered more suitable for GP data due to its binomial nature. However, both methods have inherent issues that require attention. In this study, we address previously unexplored challenges associated with these methods and propose the utilization of a likelihood ratio test as a solution. We demonstrate the advantages of employing the likelihood ratio test for GP data analysis through simulations and real data analysis.","PeriodicalId":21711,"journal":{"name":"Seed Science Research","volume":"54 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-04-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140343176","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-03-25DOI: 10.1017/s0960258523000235
Fernanda C. Beveridge, Alwyn Williams, Robyn Cave, Sundaravelpandian Kalaipandian, Buddhi Dayananda, Steve W. Adkins
Climate variability is expected to increase due to climate change, with projected increases in temperature and erratic rainfall patterns. These changes will alter the environmental cues sensed by seeds, and therefore will impact plant recruitment. This study investigated the effects of seed functional traits (germinability, germination time, synchrony and seed mass) on germination responses of several sub-tropical native Australian plant species under different environmental factors (water stress, salinity and pH). The effect of a hot water pre-treatment was also tested on Fabaceae seeds with known physical dormancy. Seed traits, environmental factors and seed pre-treatments had significant effects on final germination percentage and germination time. Seed mass and time to 50% germination (t50) were also positively correlated. In contrast, pH did not affect germination and there was no interaction between pH and any of the measured seed functional traits. Some species showed a high thermal tolerance to germination and germination was indifferent to light conditions for all species. Results showed that certain seed functional traits interact with environmental factors to influence germination percentage and time. These findings highlight the importance of considering seed functional traits when determining a species germination response under a changing climate. In addition, the findings provide important knowledge to better guide seed-based land restoration programmes.
{"title":"Interactions between seed functional traits and environmental factors and their influence on germination performance of Australian native species","authors":"Fernanda C. Beveridge, Alwyn Williams, Robyn Cave, Sundaravelpandian Kalaipandian, Buddhi Dayananda, Steve W. Adkins","doi":"10.1017/s0960258523000235","DOIUrl":"https://doi.org/10.1017/s0960258523000235","url":null,"abstract":"<p>Climate variability is expected to increase due to climate change, with projected increases in temperature and erratic rainfall patterns. These changes will alter the environmental cues sensed by seeds, and therefore will impact plant recruitment. This study investigated the effects of seed functional traits (germinability, germination time, synchrony and seed mass) on germination responses of several sub-tropical native Australian plant species under different environmental factors (water stress, salinity and pH). The effect of a hot water pre-treatment was also tested on Fabaceae seeds with known physical dormancy. Seed traits, environmental factors and seed pre-treatments had significant effects on final germination percentage and germination time. Seed mass and time to 50% germination (<span>t</span><span>50</span>) were also positively correlated. In contrast, pH did not affect germination and there was no interaction between pH and any of the measured seed functional traits. Some species showed a high thermal tolerance to germination and germination was indifferent to light conditions for all species. Results showed that certain seed functional traits interact with environmental factors to influence germination percentage and time. These findings highlight the importance of considering seed functional traits when determining a species germination response under a changing climate. In addition, the findings provide important knowledge to better guide seed-based land restoration programmes.</p>","PeriodicalId":21711,"journal":{"name":"Seed Science Research","volume":"41 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140209683","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-03-01DOI: 10.1017/s0960258524000047
Naoto Sano, Jerome Verdier
Desiccation tolerance (DT) of seeds, one of the plant's environmental adaptation mechanisms, allows them to survive as seeds in a quiescent state under extremely water-deficient conditions during the plant's life cycle, followed by seed germination and seedling establishment under favourable water conditions. The seed-DT is lost after radicle emergence; however, there is a developmental period called the ‘DT window’ during which the germinating seeds can re-induce DT following a cue from their ambient low water potential (i.e. mild osmotic stress). The DT re-inducibility within the DT window has been used as a model biosystem for understanding molecular mechanisms that activate/supress DT in a number of plant species. However, the characteristics of the DT window for species particularly important to the agroindustry are still largely fragmented. Here, physiological analyses were performed, aiming to elucidate the properties of the DT window in tomato, a model species for Solanaceae, holding a key strategic position for the seed industry and commercial use around the world. We revealed that (i) the DT window of tomato seeds is closed when the developing radicle reaches about 4 mm after germination, (ii) the most effective ambient water potential to re-induce DT into seeds is about −1.5 MPa and (iii) there is organ specificity of DT re-induction with hypocotyls, showing a longer DT window than cotyledons and roots in post-germination seeds.
{"title":"The re-establishment of desiccation tolerance in germinated tomato (Solanum lycopersicum) seeds","authors":"Naoto Sano, Jerome Verdier","doi":"10.1017/s0960258524000047","DOIUrl":"https://doi.org/10.1017/s0960258524000047","url":null,"abstract":"<p>Desiccation tolerance (DT) of seeds, one of the plant's environmental adaptation mechanisms, allows them to survive as seeds in a quiescent state under extremely water-deficient conditions during the plant's life cycle, followed by seed germination and seedling establishment under favourable water conditions. The seed-DT is lost after radicle emergence; however, there is a developmental period called the ‘DT window’ during which the germinating seeds can re-induce DT following a cue from their ambient low water potential (i.e. mild osmotic stress). The DT re-inducibility within the DT window has been used as a model biosystem for understanding molecular mechanisms that activate/supress DT in a number of plant species. However, the characteristics of the DT window for species particularly important to the agroindustry are still largely fragmented. Here, physiological analyses were performed, aiming to elucidate the properties of the DT window in tomato, a model species for Solanaceae, holding a key strategic position for the seed industry and commercial use around the world. We revealed that (i) the DT window of tomato seeds is closed when the developing radicle reaches about 4 mm after germination, (ii) the most effective ambient water potential to re-induce DT into seeds is about −1.5 MPa and (iii) there is organ specificity of DT re-induction with hypocotyls, showing a longer DT window than cotyledons and roots in post-germination seeds.</p>","PeriodicalId":21711,"journal":{"name":"Seed Science Research","volume":"18 1","pages":""},"PeriodicalIF":2.1,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140000869","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-02-22DOI: 10.1017/s0960258523000193
Jerry M. Baskin, Carol C. Baskin
‘Seed heteromorphism’ is a broadly- and loosely-defined term used to describe differences in size/mass, morphology, position on mother plants and ecological function (e.g. dispersal, dormancy/germination) of two or more seeds or other diaspores produced by an individual plant. The primary aim of this review paper was to characterize via an in-depth classification scheme the physical structural design (‘architecture’) of diaspore monomorphism and diaspore heteromorphism in angiosperms. The diaspore classification schemes of Mandák and Barker were expanded/modified, and in doing so some of the terminology that Zohary, Ellner and Shmida, and van der Pijl used for describing diaspore dispersal were incorporated into our system. Based on their (relative) size, morphology and position on the mother plant, diaspores of angiosperms were divided into two divisions and each of these into several successively lower hierarchical layers. Thus, our classification scheme, an earlier version of which was published in the second edition of ‘Seeds’ by Baskin and Baskin, includes not only heteromorphic but also monomorphic diaspores, the Division to which the diaspores of the vast majority of angiosperms belong. The scheme will be useful in describing the ecology, biogeography and evolution of seed heteromorphism in flowering plants.
种子异形 "是一个广义和松散定义的术语,用于描述单株植物产生的两个或多个种子或其他二孢子在大小/质量、形态、在母株上的位置和生态功能(如传播、休眠/发芽)方面的差异。本综述论文的主要目的是通过深入的分类方案,描述被子植物中二孢子单形性和二孢子异形性的物理结构设计("结构")特征。本文对曼达克(Mandák)和巴克(Barker)的二孢子分类方案进行了扩展/修改,并将佐哈里(Zohary)、埃勒纳(Ellner)和什米达(Shmida)以及范德佩尔(van der Pijl)用于描述二孢子散布的一些术语纳入了我们的系统。根据其(相对)大小、形态和在母株上的位置,被子植物的二孢子被分为两个部分,每个部分又被分为几个连续的较低层次。因此,我们的分类方案(其早期版本发表在 Baskin 和 Baskin 合著的《种子》第二版中)不仅包括异形二孢体,还包括单形二孢体,绝大多数被子植物的二孢体都属于单形二孢体。该计划将有助于描述有花植物种子异形的生态学、生物地理学和进化。
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Pub Date : 2024-02-16DOI: 10.1017/s0960258524000035
Héctor E. Pérez
Statistical significance, or lack thereof, is often erroneously interpreted as a measure of the magnitude of effects, correlations between variables or practical relevance of research results. However, calculated P-values do not provide any information of this sort. Alternatively, effect sizes as measured by effect size indices provide complementary information to results of statistical hypothesis testing that is crucial and necessary to fully interpret data and then draw meaningful conclusions. Effect size indices have been used extensively for decades in the medical, psychological and social sciences but have received scant attention in the plant sciences. This Technical Update focuses on (1) raising awareness of these important statistical tools for seed science research, (2) providing additional resources useful for incorporating effect sizes into research programmes and (3) encouraging further applications of these tools in our discipline.
统计意义(或缺乏统计意义)常常被错误地解释为衡量研究结果的效果大小、变量之间的相关性或实际意义。然而,计算得出的 P 值并不能提供任何此类信息。相反,用效应大小指数衡量的效应大小为统计假设检验的结果提供了补充信息,这些信息对于充分解释数据并得出有意义的结论至关重要,也是必要的。数十年来,效应大小指数在医学、心理学和社会科学领域得到了广泛应用,但在植物科学领域却很少受到关注。本技术更新的重点是:(1) 提高对种子科学研究中这些重要统计工具的认识;(2) 提供更多有用的资源,将效应大小纳入研究计划;(3) 鼓励在本学科中进一步应用这些工具。
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