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Muscle injury-induced hypoxia alters the proliferation and differentiation potentials of muscle resident stromal cells. 肌肉损伤引起的缺氧改变了肌肉常驻间质细胞的增殖和分化潜能。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-06-19 DOI: 10.1186/s13395-019-0202-5
Geneviève Drouin, Vanessa Couture, Marc-Antoine Lauzon, Frédéric Balg, Nathalie Faucheux, Guillaume Grenier

Background: Trauma-induced heterotopic ossification (HO) is a complication that develops under three conditions: the presence of an osteogenic progenitor cell, an inducing factor, and a permissive environment. We previously showed that a mouse multipotent Sca1+ CD31- Lin- muscle resident stromal cell (mrSC) population is involved in the development of HO in the presence of inducing factors, members of the bone morphogenetic protein family. Interestingly, BMP9 unlike BMP2 causes HO only if the muscle is damaged by injection of cardiotoxin. Because acute trauma often results in blood vessel breakdown, we hypothesized that a hypoxic state in damaged muscles may foster mrSCs activation and proliferation and trigger differentiation toward an osteogenic lineage, thus promoting the development of HO.

Methods: Three- to - six-month-old male C57Bl/6 mice were used to induce muscle damage by injection of cardiotoxin intramuscularly into the tibialis anterior and gastrocnemius muscles. mrSCs were isolated from damaged (hypoxic state) and contralateral healthy muscles and counted, and their osteoblastic differentiation with or without BMP2 and BMP9 was determined by alkaline phosphatase activity measurement. The proliferation and differentiation of mrSCs isolated from healthy muscles was also studied in normoxic incubator and hypoxic conditions. The effect of hypoxia on BMP synthesis and Smad pathway activation was determined by qPCR and/or Western blot analyses. Differences between normally distributed groups were compared using a Student's paired t test or an unpaired t test.

Results: The hypoxic state of a severely damaged muscle increased the proliferation and osteogenic differentiation of mrSCs. mrSCs isolated from damaged muscles also displayed greater sensitivity to osteogenic signals, especially BMP9, than did mrSCs from a healthy muscle. In hypoxic conditions, mrSCs isolated from a control muscle were more proliferative and were more prone to osteogenic differentiation. Interestingly, Smad1/5/8 activation was detected in hypoxic conditions and was still present after 5 days, while Smad1/5/8 phosphorylation could not be detected after 3 h of normoxic incubator condition. BMP9 mRNA transcripts and protein levels were higher in mrSCs cultured in hypoxic conditions. Our results suggest that low-oxygen levels in damaged muscle influence mrSC behavior by facilitating their differentiation into osteoblasts. This effect may be mediated partly through the activation of the Smad pathway and the expression of osteoinductive growth factors such as BMP9 by mrSCs.

Conclusion: Hypoxia should be considered a key factor in the microenvironment of damaged muscle that triggers HO.

背景:创伤性异位骨化(HO)是一种在三种情况下发生的并发症:成骨祖细胞的存在、诱导因子和宽松的环境。我们之前的研究表明,小鼠多能Sca1+ CD31- Lin-肌间质细胞(mrSC)群在骨形态发生蛋白家族成员诱导因子的存在下参与了HO的发展。有趣的是,与BMP2不同,BMP9仅在心肌因注射心脏毒素而受损时才会引起HO。由于急性创伤通常会导致血管破裂,我们假设受损肌肉的缺氧状态可能会促进mrSCs的激活和增殖,并引发向成骨谱系的分化,从而促进HO的发展。方法:以3 ~ 6月龄雄性C57Bl/6小鼠为研究对象,采用胫前肌和腓肠肌肌内注射心脏毒素的方法诱导心肌损伤。从损伤(缺氧状态)和对侧健康肌肉中分离mrSCs并计数,通过碱性磷酸酶活性测定是否有BMP2和BMP9来测定其成骨细胞分化。我们还研究了从健康肌肉中分离的mrSCs在常氧培养箱和缺氧条件下的增殖和分化。缺氧对BMP合成和Smad通路激活的影响通过qPCR和/或Western blot分析确定。正态分布组之间的差异使用学生配对t检验或非配对t检验进行比较。结果:重度损伤肌肉缺氧状态使mrSCs增殖和成骨分化增强。与来自健康肌肉的mrSCs相比,从受损肌肉中分离出的mrSCs对成骨信号,尤其是BMP9表现出更大的敏感性。在缺氧条件下,从对照肌中分离的mrSCs具有更强的增殖能力,更容易发生成骨分化。有趣的是,Smad1/5/8在缺氧条件下被检测到激活,并且在5天后仍然存在,而Smad1/5/8在常氧培养条件下3小时后无法检测到磷酸化。在缺氧条件下培养的mrSCs中,BMP9 mRNA转录物和蛋白水平较高。我们的研究结果表明,受损肌肉中的低氧水平通过促进mrSC向成骨细胞的分化来影响其行为。这种作用可能部分通过激活Smad通路和mrsc表达骨诱导生长因子(如BMP9)来介导。结论:缺氧应被认为是损伤肌肉微环境中触发HO的关键因素。
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引用次数: 18
Culturing C2C12 myotubes on micromolded gelatin hydrogels accelerates myotube maturation. 微成型明胶水凝胶培养C2C12肌管加速肌管成熟。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-06-07 DOI: 10.1186/s13395-019-0203-4
Lance T Denes, Lance A Riley, Joseph R Mijares, Juan D Arboleda, Kendra McKee, Karyn A Esser, Eric T Wang

Background: Skeletal muscle contributes to roughly 40% of lean body mass, and its loss contributes to morbidity and mortality in a variety of pathogenic conditions. Significant insights into muscle function have been made using cultured cells, in particular, the C2C12 myoblast line. However, differentiation of these cells in vitro typically yields immature myotubes relative to skeletal muscles in vivo. While many efforts have attempted to improve the maturity of cultured myotubes, including the use of bioengineered substrates, lack of molecular characterization has precluded their widespread implementation. This study characterizes morphological, molecular, and transcriptional features of C2C12 myotubes cultured on crosslinked, micropatterned gelatin substrates fabricated using previously established methods and compares them to myotubes grown on unpatterned gelatin or traditional plasticware.

Methods: We used immunocytochemistry, SDS-PAGE, and RNAseq to characterize C2C12 myotubes grown on micropatterned gelatin hydrogels, unpatterned gelatin hydrogels, and typical cell culture substrates (i.e., plastic or collagen-coated glass) across a differentiation time course. The ability to form aligned sarcomeres and myofilament protein concentration was assessed. Additionally, the transcriptome was analyzed across the differentiation time course.

Results: C2C12 myotubes grown on micropatterned gelatin hydrogels display an increased ability to form aligned sarcomeres as well as increased contractile protein content relative to myotubes cultured on unpatterned gelatin and plastic. Additionally, genes related to sarcomere formation and in vivo muscle maturation are upregulated in myotubes grown on micropatterned gelatin hydrogels relative to control myotubes.

Conclusions: Our results suggest that growing C2C12 myotubes on micropatterned gelatin hydrogels accelerates sarcomere formation and yields a more fully matured myotube culture. Thus, the use of micropatterned hydrogels is a viable and simple approach to better model skeletal muscle biology in vitro.

背景:骨骼肌约占瘦体重的40%,在各种致病性疾病中,骨骼肌的丧失会导致发病率和死亡率。利用培养细胞,特别是C2C12成肌细胞系,对肌肉功能有了重要的了解。然而,这些细胞在体外的分化通常产生不成熟的肌管,相对于体内的骨骼肌。虽然许多努力都试图提高培养肌管的成熟度,包括使用生物工程基质,但缺乏分子表征阻碍了它们的广泛应用。本研究表征了用先前建立的方法在交联微图纹明胶基质上培养的C2C12肌管的形态、分子和转录特征,并将其与在无图纹明胶或传统塑料器皿上培养的肌管进行了比较。方法:我们使用免疫细胞化学、SDS-PAGE和RNAseq对生长在微图纹明胶水凝胶、无图纹明胶水凝胶和典型细胞培养基质(即塑料或胶原涂层玻璃)上的C2C12肌管进行了分化过程的表征。评估形成排列的肌节的能力和肌丝蛋白浓度。此外,转录组在分化时间过程中进行了分析。结果:与在无图案明胶和塑料上培养的肌管相比,在微图案明胶水凝胶上培养的C2C12肌管显示出更强的形成排列的肌节的能力,以及更高的收缩蛋白含量。此外,相对于对照肌管,在微图案明胶水凝胶上生长的肌管中,与肌节形成和体内肌肉成熟相关的基因上调。结论:我们的研究结果表明,在微图案明胶水凝胶上生长C2C12肌管加速了肌瘤的形成,并产生了更成熟的肌管培养。因此,使用微图案水凝胶是一种可行且简单的方法,可以更好地在体外模拟骨骼肌生物学。
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引用次数: 65
Congenital myopathy with hanging big toe due to homozygous myopalladin (MYPN) mutation. 纯合子myopalladin (MYPN)突变引起的先天性大脚趾悬垂性肌病。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-05-27 DOI: 10.1186/s13395-019-0199-9
Luciano Merlini, Patrizia Sabatelli, Manuela Antoniel, Valeria Carinci, Fabio Niro, Giuseppe Monetti, Annalaura Torella, Teresa Giugliano, Cesare Faldini, Vincenzo Nigro

Background: Myopalladin (MYPN) is a component of the sarcomere that tethers nebulin in skeletal muscle and nebulette in cardiac muscle to alpha-actinin at the Z lines. Autosomal dominant MYPN mutations cause hypertrophic, dilated, or restrictive cardiomyopathy. Autosomal recessive MYPN mutations have been reported in only six families showing a mildly progressive nemaline or cap myopathy with cardiomyopathy in some patients.

Case presentation: A consanguineous family with congenital to adult-onset muscle weakness and hanging big toe was reported. Muscle biopsy showed minimal changes with internal nuclei, type 1 fiber predominance, and ultrastructural defects of Z line. Muscle CT imaging showed marked hypodensity of the sartorius bilaterally and MRI scattered abnormal high-intensity areas in the internal tongue muscle and in the posterior cervical muscles. Cardiac involvement was demonstrated by magnetic resonance imaging and late gadolinium enhancement. Whole exome sequencing analysis identified a homozygous loss of function single nucleotide deletion in the exon 11 of the MYPN gene in two siblings. Full-length MYPN protein was undetectable on immunoblotting, and on immunofluorescence, its localization at the Z line was missed.

Conclusions: This report extends the phenotypic spectrum of recessive MYPN-related myopathies showing: (1) the two patients had hanging big toe and the oldest one developed spine and hand contractures, none of these signs observed in the previously reported patients, (2) specific ultrastructural changes consisting in Z line fragmentation, but (3) no nemaline or caps on muscle pathology.

背景:肌张力蛋白(Myopalladin, MYPN)是肌节的一种成分,它将骨骼肌中的星云蛋白和心肌中的星云蛋白连接到Z线上的α -肌动蛋白。常染色体显性MYPN突变引起肥厚性、扩张性或限制性心肌病。常染色体隐性MYPN突变仅在6个家族中报道,在一些患者中表现为轻度进行性线状或帽状肌病伴心肌病。病例介绍:我们报告了一个有先天性到成人发病的肌肉无力和大脚趾下垂的近亲家庭。肌肉活检显示微小改变,内核为主,1型纤维为主,Z线超微结构缺损。肌肉CT示双侧缝匠肌明显低密度,MRI示舌内肌及颈后肌散在异常高强度区。心脏受累表现为磁共振成像和晚期钆增强。全外显子组测序分析在两个兄弟姐妹中发现了MYPN基因外显子11的纯合功能缺失单核苷酸缺失。免疫印迹法未检测到全长MYPN蛋白,免疫荧光法未检测到其在Z线的定位。结论:本报告扩大了隐性mypn相关肌病的表型谱,显示:(1)2例患者有大脚趾下垂,最老的患者出现脊柱和手部挛缩,这些症状在先前报道的患者中均未观察到;(2)特定的超微结构变化,包括Z线断裂;但(3)肌肉病理无线状或帽状。
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引用次数: 7
A GDF11/myostatin inhibitor, GDF11 propeptide-Fc, increases skeletal muscle mass and improves muscle strength in dystrophic mdx mice. GDF11/肌肉生长抑制素抑制剂GDF11前肽- fc可增加营养不良mdx小鼠的骨骼肌质量并改善肌肉力量。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-05-27 DOI: 10.1186/s13395-019-0197-y
Quan Jin, Chunping Qiao, Jianbin Li, Bin Xiao, Juan Li, Xiao Xiao

Background: Growth differentiation factor 11 (GDF11) is a member of the transforming growth factor β superfamily. The GDF11 propeptide, which is derived from the GDF11 precursor protein, blocks the activity of GDF11 and its homolog, myostatin, which are both potent inhibitors of muscle growth. Thus, treatment with GDF11 propeptide may be a potential therapeutic strategy for diseases associated with muscle atrophy like sarcopenia and the muscular dystrophies. Here, we evaluate the impact of GDF11 propeptide-Fc (GDF11PRO-Fc) gene delivery on skeletal muscle in normal and dystrophic adult mice.

Methods: A pull-down assay was used to obtain physical confirmation of a protein-protein interaction between GDF11PRO-Fc and GDF11 or myostatin. Next, differentiated C2C12 myotubes were treated with AAV6-GDF11PRO-Fc and challenged with GDF11 or myostatin to determine if GDF11PRO-Fc could block GDF11/myostatin-induced myotube atrophy. Localized expression of GDF11PRO-Fc was evaluated via a unilateral intramuscular injection of AAV9-GDF11PRO-Fc into the hindlimb of C57BL/6J mice. In mdx mice, intravenous injection of AAV9-GDF11PRO-Fc was used to achieve systemic expression. The impact of GDF11PRO-Fc on muscle mass, function, and pathological features were assessed.

Results: GDF11PRO-Fc was observed to bind both GDF11 and myostatin. In C2C12 myotubes, expression of GDF11PRO-Fc was able to mitigate GDF11/myostatin-induced atrophy. Following intramuscular injection in C57BL/6J mice, increased grip strength and localized muscle hypertrophy were observed in the injected hindlimb after 10 weeks. In mdx mice, systemic expression of GDF11PRO-Fc resulted in skeletal muscle hypertrophy without a significant change in cardiac mass after 12 weeks. In addition, grip strength and rotarod latency time were improved. Intramuscular fibrosis was also reduced in treated mdx mice; however, there was no change seen in central nucleation, membrane permeability to serum IgG or serum creatine kinase levels.

Conclusions: GDF11PRO-Fc induces skeletal muscle hypertrophy and improvements in muscle strength via inhibition of GDF11/myostatin signaling. However, GDF11PRO-Fc does not significantly improve the dystrophic pathology in mdx mice.

背景:生长分化因子11 (GDF11)是转化生长因子β超家族的一员。GDF11前肽来源于GDF11前体蛋白,可阻断GDF11及其同源物肌肉生长抑制素的活性,这两种物质都是有效的肌肉生长抑制剂。因此,使用GDF11前肽治疗可能是与肌肉萎缩相关的疾病,如肌肉减少症和肌肉营养不良症的潜在治疗策略。在这里,我们评估了GDF11前肽- fc (GDF11PRO-Fc)基因传递对正常和营养不良成年小鼠骨骼肌的影响。方法:采用下拉法获得GDF11PRO-Fc与GDF11或肌生长抑制素之间蛋白相互作用的物理证实。接下来,用AAV6-GDF11PRO-Fc处理分化的C2C12肌管,并用GDF11或肌生长抑制素刺激,以确定GDF11PRO-Fc是否能阻断GDF11/肌生长抑制素诱导的肌管萎缩。通过在C57BL/6J小鼠后肢单侧肌内注射AAV9-GDF11PRO-Fc来评估GDF11PRO-Fc的局部表达。在mdx小鼠中,通过静脉注射AAV9-GDF11PRO-Fc实现全身表达。评估GDF11PRO-Fc对肌肉质量、功能和病理特征的影响。结果:观察到GDF11PRO-Fc结合GDF11和肌肉生长抑制素。在C2C12肌管中,GDF11PRO-Fc的表达能够减轻GDF11/肌生成抑制素诱导的萎缩。C57BL/6J小鼠肌内注射后,10周后观察到注射后后肢握力增加,局部肌肉肥大。在mdx小鼠中,GDF11PRO-Fc的全身表达导致骨骼肌肥大,12周后心脏质量没有明显变化。此外,握力和旋转杆潜伏期也有所提高。mdx治疗小鼠肌内纤维化也减少;然而,中央成核、膜通透性、血清IgG和血清肌酸激酶水平未见变化。结论:GDF11PRO-Fc通过抑制GDF11/肌生长抑制素信号传导诱导骨骼肌肥大和肌力改善。然而,GDF11PRO-Fc并没有显著改善mdx小鼠的营养不良病理。
{"title":"A GDF11/myostatin inhibitor, GDF11 propeptide-Fc, increases skeletal muscle mass and improves muscle strength in dystrophic mdx mice.","authors":"Quan Jin,&nbsp;Chunping Qiao,&nbsp;Jianbin Li,&nbsp;Bin Xiao,&nbsp;Juan Li,&nbsp;Xiao Xiao","doi":"10.1186/s13395-019-0197-y","DOIUrl":"https://doi.org/10.1186/s13395-019-0197-y","url":null,"abstract":"<p><strong>Background: </strong>Growth differentiation factor 11 (GDF11) is a member of the transforming growth factor β superfamily. The GDF11 propeptide, which is derived from the GDF11 precursor protein, blocks the activity of GDF11 and its homolog, myostatin, which are both potent inhibitors of muscle growth. Thus, treatment with GDF11 propeptide may be a potential therapeutic strategy for diseases associated with muscle atrophy like sarcopenia and the muscular dystrophies. Here, we evaluate the impact of GDF11 propeptide-Fc (GDF11PRO-Fc) gene delivery on skeletal muscle in normal and dystrophic adult mice.</p><p><strong>Methods: </strong>A pull-down assay was used to obtain physical confirmation of a protein-protein interaction between GDF11PRO-Fc and GDF11 or myostatin. Next, differentiated C2C12 myotubes were treated with AAV6-GDF11PRO-Fc and challenged with GDF11 or myostatin to determine if GDF11PRO-Fc could block GDF11/myostatin-induced myotube atrophy. Localized expression of GDF11PRO-Fc was evaluated via a unilateral intramuscular injection of AAV9-GDF11PRO-Fc into the hindlimb of C57BL/6J mice. In mdx mice, intravenous injection of AAV9-GDF11PRO-Fc was used to achieve systemic expression. The impact of GDF11PRO-Fc on muscle mass, function, and pathological features were assessed.</p><p><strong>Results: </strong>GDF11PRO-Fc was observed to bind both GDF11 and myostatin. In C2C12 myotubes, expression of GDF11PRO-Fc was able to mitigate GDF11/myostatin-induced atrophy. Following intramuscular injection in C57BL/6J mice, increased grip strength and localized muscle hypertrophy were observed in the injected hindlimb after 10 weeks. In mdx mice, systemic expression of GDF11PRO-Fc resulted in skeletal muscle hypertrophy without a significant change in cardiac mass after 12 weeks. In addition, grip strength and rotarod latency time were improved. Intramuscular fibrosis was also reduced in treated mdx mice; however, there was no change seen in central nucleation, membrane permeability to serum IgG or serum creatine kinase levels.</p><p><strong>Conclusions: </strong>GDF11PRO-Fc induces skeletal muscle hypertrophy and improvements in muscle strength via inhibition of GDF11/myostatin signaling. However, GDF11PRO-Fc does not significantly improve the dystrophic pathology in mdx mice.</p>","PeriodicalId":21747,"journal":{"name":"Skeletal Muscle","volume":"9 1","pages":"16"},"PeriodicalIF":4.9,"publicationDate":"2019-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s13395-019-0197-y","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37001830","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 28
Automated image-analysis method for the quantification of fiber morphometry and fiber type population in human skeletal muscle. 用于人体骨骼肌纤维形态测定和纤维类型种群定量的自动图像分析方法。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-05-27 DOI: 10.1186/s13395-019-0200-7
Perla C Reyes-Fernandez, Baptiste Periou, Xavier Decrouy, Fréderic Relaix, François Jérôme Authier

Background: The quantitative analysis of muscle histomorphometry has been growing in importance in both research and clinical settings. Accurate and stringent assessment of myofibers' changes in size and number, and alterations in the proportion of oxidative (type I) and glycolytic (type II) fibers is essential for the appropriate study of aging and pathological muscle, as well as for diagnosis and follow-up of muscle diseases. Manual and semi-automated methods to assess muscle morphometry in sections are time-consuming, limited to a small field of analysis, and susceptible to bias, while most automated methods have been only tested in rodent muscle.

Methods: We developed a new macro script for Fiji-ImageJ to automatically assess human fiber morphometry in digital images of the entire muscle. We tested the functionality of our method in deltoid muscle biopsies from a heterogeneous population of subjects with histologically normal muscle (male, female, old, young, lean, obese) and patients with dermatomyositis, necrotizing autoimmune myopathy, and anti-synthetase syndrome myopathy.

Results: Our macro is fully automated, requires no user intervention, and demonstrated improved fiber segmentation by running a series of image pre-processing steps before the analysis. Likewise, our tool showed high accuracy, as compared with manual methods, for identifying the total number of fibers (r = 0.97, p < 0.001), fiber I and fiber II proportion (r = 0.92, p < 0.001), and minor diameter (r = 0.86, p < 0.001) while conducting analysis in ~ 5 min/sample. The performance of the macro analysis was maintained in pectoral and deltoid samples from subjects of different age, gender, body weight, and muscle status. The output of the analyses includes excel files with the quantification of fibers' morphometry and color-coded maps based on the fiber's size, which proved to be an advantageous feature for the fast and easy visual identification of location-specific atrophy and a potential tool for medical diagnosis.

Conclusion: Our macro is reliable and suitable for the study of human skeletal muscle for research and for diagnosis in clinical settings providing reproducible and consistent analysis when the time is of the utmost importance.

背景:肌肉组织形态计量学的定量分析在研究和临床环境中都越来越重要。准确、严格地评估肌纤维大小和数量的变化,以及氧化(I型)和糖酵解(II型)纤维比例的变化,对于适当地研究衰老和病理肌肉,以及肌肉疾病的诊断和随访至关重要。人工和半自动化的方法来评估肌肉形态测量切片是耗时的,局限于一个小的分析领域,并且容易产生偏差,而大多数自动化方法只在啮齿动物肌肉中进行了测试。方法:我们开发了Fiji-ImageJ宏脚本,用于在全肌肉数字图像中自动评估人体纤维形态。我们测试了我们的方法在三角肌活检中的功能,这些活检来自组织学上正常肌肉的异质人群(男性、女性、老年、年轻、瘦弱、肥胖)和皮肌炎、坏死性自身免疫性肌病和抗合成酶综合征肌病患者。结果:我们的宏是完全自动化的,不需要用户干预,并通过在分析前运行一系列图像预处理步骤来改善纤维分割。同样,与手工方法相比,我们的工具在识别纤维总数方面显示出很高的准确性(r = 0.97, p)。结论:我们的宏是可靠的,适用于人类骨骼肌的研究和临床诊断,在时间至关重要的情况下提供可重复性和一致性的分析。
{"title":"Automated image-analysis method for the quantification of fiber morphometry and fiber type population in human skeletal muscle.","authors":"Perla C Reyes-Fernandez,&nbsp;Baptiste Periou,&nbsp;Xavier Decrouy,&nbsp;Fréderic Relaix,&nbsp;François Jérôme Authier","doi":"10.1186/s13395-019-0200-7","DOIUrl":"https://doi.org/10.1186/s13395-019-0200-7","url":null,"abstract":"<p><strong>Background: </strong>The quantitative analysis of muscle histomorphometry has been growing in importance in both research and clinical settings. Accurate and stringent assessment of myofibers' changes in size and number, and alterations in the proportion of oxidative (type I) and glycolytic (type II) fibers is essential for the appropriate study of aging and pathological muscle, as well as for diagnosis and follow-up of muscle diseases. Manual and semi-automated methods to assess muscle morphometry in sections are time-consuming, limited to a small field of analysis, and susceptible to bias, while most automated methods have been only tested in rodent muscle.</p><p><strong>Methods: </strong>We developed a new macro script for Fiji-ImageJ to automatically assess human fiber morphometry in digital images of the entire muscle. We tested the functionality of our method in deltoid muscle biopsies from a heterogeneous population of subjects with histologically normal muscle (male, female, old, young, lean, obese) and patients with dermatomyositis, necrotizing autoimmune myopathy, and anti-synthetase syndrome myopathy.</p><p><strong>Results: </strong>Our macro is fully automated, requires no user intervention, and demonstrated improved fiber segmentation by running a series of image pre-processing steps before the analysis. Likewise, our tool showed high accuracy, as compared with manual methods, for identifying the total number of fibers (r = 0.97, p < 0.001), fiber I and fiber II proportion (r = 0.92, p < 0.001), and minor diameter (r = 0.86, p < 0.001) while conducting analysis in ~ 5 min/sample. The performance of the macro analysis was maintained in pectoral and deltoid samples from subjects of different age, gender, body weight, and muscle status. The output of the analyses includes excel files with the quantification of fibers' morphometry and color-coded maps based on the fiber's size, which proved to be an advantageous feature for the fast and easy visual identification of location-specific atrophy and a potential tool for medical diagnosis.</p><p><strong>Conclusion: </strong>Our macro is reliable and suitable for the study of human skeletal muscle for research and for diagnosis in clinical settings providing reproducible and consistent analysis when the time is of the utmost importance.</p>","PeriodicalId":21747,"journal":{"name":"Skeletal Muscle","volume":"9 1","pages":"15"},"PeriodicalIF":4.9,"publicationDate":"2019-05-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s13395-019-0200-7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37015630","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 26
Targeted ablation of the cellular inhibitor of apoptosis 1 (cIAP1) attenuates denervation-induced skeletal muscle atrophy. 靶向消融细胞凋亡抑制剂1 (cIAP1)可减轻去神经支配诱导的骨骼肌萎缩。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-05-24 DOI: 10.1186/s13395-019-0201-6
Neena Lala-Tabbert, Rim Lejmi-Mrad, Kristen Timusk, Marina Fukano, Janelle Holbrook, Martine St-Jean, Eric C LaCasse, Robert G Korneluk

Background: Skeletal muscle atrophy is a pathological condition that contributes to morbidity in a variety of conditions including denervation, cachexia, and aging. Muscle atrophy is characterized as decreased muscle fiber cross-sectional area and protein content due, in part, to the proteolytic activities of two muscle-specific E3 ubiquitin ligases: muscle RING-finger 1 (MuRF1) and muscle atrophy F-box (MAFbx or Atrogin-1). The nuclear factor-kappa B (NF-κB) pathway has emerged as a critical signaling network in skeletal muscle atrophy and has become a prime therapeutic target for the treatment of muscle diseases. Unfortunately, none of the NF-κB targeting drugs are currently being used to treat these diseases, likely because of our limited knowledge and specificity, for muscle biology and disease. The cellular inhibitor of apoptosis 1 (cIAP1) protein is a positive regulator of tumor necrosis factor alpha (TNFα)-mediated classical NF-κB signaling, and cIAP1 loss has been shown to enhance muscle regeneration during acute and chronic injury.

Methods: Sciatic nerve transection in wild-type, cIAP1-null and Smac mimetic compound (SMC)-treated mice was performed to investigate the role of cIAP1 in denervation-induced atrophy. Genetic in vitro models of C2C12 myoblasts and primary myoblasts were also used to examine the role of classical NF-κB activity in cIAP1-induced myotube atrophy.

Results: We found that cIAP1 expression was upregulated in denervated muscles compared to non-denervated controls 14 days after denervation. Genetic and pharmacological loss of cIAP1 attenuated denervation-induced muscle atrophy and overexpression of cIAP1 in myotubes was sufficient to induce atrophy. The induction of myotube atrophy by cIAP1 was attenuated when the classical NF-κB signaling pathway was inhibited.

Conclusions: These results demonstrate the cIAP1 is an important mediator of NF-κB/MuRF1 signaling in skeletal muscle atrophy and is a promising therapeutic target for muscle wasting diseases.

背景:骨骼肌萎缩是一种病理状况,可导致多种疾病的发病,包括神经支配丧失、恶病质和衰老。肌肉萎缩的特征是肌纤维横截面积和蛋白质含量减少,部分原因是两种肌肉特异性E3泛素连接酶的蛋白水解活性:肌肉环指1 (MuRF1)和肌肉萎缩F-box (MAFbx或Atrogin-1)。核因子κB (NF-κB)通路已成为骨骼肌萎缩的关键信号网络,并已成为治疗肌肉疾病的主要靶点。不幸的是,目前没有NF-κB靶向药物用于治疗这些疾病,可能是因为我们对肌肉生物学和疾病的知识和特异性有限。细胞凋亡抑制剂1 (cIAP1)蛋白是肿瘤坏死因子α (TNFα)介导的经典NF-κB信号传导的正调节因子,并且在急性和慢性损伤中,cIAP1的丢失已被证明可以促进肌肉再生。方法:采用横断野生型、cIAP1缺失和SMC处理小鼠坐骨神经,研究cIAP1在去神经支配性萎缩中的作用。采用体外C2C12成肌细胞和原代成肌细胞遗传模型,研究经典NF-κB活性在ciap1诱导的肌管萎缩中的作用。结果:我们发现,在去神经支配后14天,与未去神经支配的对照组相比,去神经支配肌肉中的cIAP1表达上调。遗传和药理学上cIAP1的缺失减轻了去神经支配引起的肌肉萎缩,肌管中cIAP1的过表达足以诱导萎缩。当经典的NF-κB信号通路被抑制时,cIAP1对肌管萎缩的诱导作用减弱。结论:cIAP1是骨骼肌萎缩过程中NF-κB/MuRF1信号通路的重要调节因子,是骨骼肌萎缩疾病的重要治疗靶点。
{"title":"Targeted ablation of the cellular inhibitor of apoptosis 1 (cIAP1) attenuates denervation-induced skeletal muscle atrophy.","authors":"Neena Lala-Tabbert,&nbsp;Rim Lejmi-Mrad,&nbsp;Kristen Timusk,&nbsp;Marina Fukano,&nbsp;Janelle Holbrook,&nbsp;Martine St-Jean,&nbsp;Eric C LaCasse,&nbsp;Robert G Korneluk","doi":"10.1186/s13395-019-0201-6","DOIUrl":"https://doi.org/10.1186/s13395-019-0201-6","url":null,"abstract":"<p><strong>Background: </strong>Skeletal muscle atrophy is a pathological condition that contributes to morbidity in a variety of conditions including denervation, cachexia, and aging. Muscle atrophy is characterized as decreased muscle fiber cross-sectional area and protein content due, in part, to the proteolytic activities of two muscle-specific E3 ubiquitin ligases: muscle RING-finger 1 (MuRF1) and muscle atrophy F-box (MAFbx or Atrogin-1). The nuclear factor-kappa B (NF-κB) pathway has emerged as a critical signaling network in skeletal muscle atrophy and has become a prime therapeutic target for the treatment of muscle diseases. Unfortunately, none of the NF-κB targeting drugs are currently being used to treat these diseases, likely because of our limited knowledge and specificity, for muscle biology and disease. The cellular inhibitor of apoptosis 1 (cIAP1) protein is a positive regulator of tumor necrosis factor alpha (TNFα)-mediated classical NF-κB signaling, and cIAP1 loss has been shown to enhance muscle regeneration during acute and chronic injury.</p><p><strong>Methods: </strong>Sciatic nerve transection in wild-type, cIAP1-null and Smac mimetic compound (SMC)-treated mice was performed to investigate the role of cIAP1 in denervation-induced atrophy. Genetic in vitro models of C2C12 myoblasts and primary myoblasts were also used to examine the role of classical NF-κB activity in cIAP1-induced myotube atrophy.</p><p><strong>Results: </strong>We found that cIAP1 expression was upregulated in denervated muscles compared to non-denervated controls 14 days after denervation. Genetic and pharmacological loss of cIAP1 attenuated denervation-induced muscle atrophy and overexpression of cIAP1 in myotubes was sufficient to induce atrophy. The induction of myotube atrophy by cIAP1 was attenuated when the classical NF-κB signaling pathway was inhibited.</p><p><strong>Conclusions: </strong>These results demonstrate the cIAP1 is an important mediator of NF-κB/MuRF1 signaling in skeletal muscle atrophy and is a promising therapeutic target for muscle wasting diseases.</p>","PeriodicalId":21747,"journal":{"name":"Skeletal Muscle","volume":"9 1","pages":"13"},"PeriodicalIF":4.9,"publicationDate":"2019-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s13395-019-0201-6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36995343","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 17
Preclinical rationale for entinostat in embryonal rhabdomyosarcoma. 恩替诺斯他治疗胚胎横纹肌肉瘤的临床前原理。
IF 5.3 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-05-21 DOI: 10.1186/s13395-019-0198-x
Narendra Bharathy, Noah E Berlow, Eric Wang, Jinu Abraham, Teagan P Settelmeyer, Jody E Hooper, Matthew N Svalina, Zia Bajwa, Martin W Goros, Brian S Hernandez, Johannes E Wolff, Ranadip Pal, Angela M Davies, Arya Ashok, Darnell Bushby, Maria Mancini, Christopher Noakes, Neal C Goodwin, Peter Ordentlich, James Keck, Douglas S Hawkins, Erin R Rudzinski, Atiya Mansoor, Theodore J Perkins, Christopher R Vakoc, Joel E Michalek, Charles Keller

Background: Rhabdomyosarcoma (RMS) is the most common soft tissue sarcoma in the pediatric cancer population. Survival among metastatic RMS patients has remained dismal yet unimproved for years. We previously identified the class I-specific histone deacetylase inhibitor, entinostat (ENT), as a pharmacological agent that transcriptionally suppresses the PAX3:FOXO1 tumor-initiating fusion gene found in alveolar rhabdomyosarcoma (aRMS), and we further investigated the mechanism by which ENT suppresses PAX3:FOXO1 oncogene and demonstrated the preclinical efficacy of ENT in RMS orthotopic allograft and patient-derived xenograft (PDX) models. In this study, we investigated whether ENT also has antitumor activity in fusion-negative eRMS orthotopic allografts and PDX models either as a single agent or in combination with vincristine (VCR).

Methods: We tested the efficacy of ENT and VCR as single agents and in combination in orthotopic allograft and PDX mouse models of eRMS. We then performed CRISPR screening to identify which HDAC among the class I HDACs is responsible for tumor growth inhibition in eRMS. To analyze whether ENT treatment as a single agent or in combination with VCR induces myogenic differentiation, we performed hematoxylin and eosin (H&E) staining in tumors.

Results: ENT in combination with the chemotherapy VCR has synergistic antitumor activity in a subset of fusion-negative eRMS in orthotopic "allografts," although PDX mouse models were too hypersensitive to the VCR dose used to detect synergy. Mechanistic studies involving CRISPR suggest that HDAC3 inhibition is the primary mechanism of cell-autonomous cytoreduction in eRMS. Following cytoreduction in vivo, residual tumor cells in the allograft models treated with chemotherapy undergo a dramatic, entinostat-induced (70-100%) conversion to non-proliferative rhabdomyoblasts.

Conclusion: Our results suggest that the targeting class I HDACs may provide a therapeutic benefit for selected patients with eRMS. ENT's preclinical in vivo efficacy makes ENT a rational drug candidate in a phase II clinical trial for eRMS.

背景:横纹肌肉瘤(RMS横纹肌肉瘤(RMS)是儿童癌症中最常见的软组织肉瘤。多年来,转移性横纹肌肉瘤患者的生存率一直很低,而且没有改善。我们以前曾发现 I 类特异性组蛋白去乙酰化酶抑制剂恩替诺司他(ENT)是一种能转录抑制 PAX3:我们进一步研究了ENT抑制PAX3:FOXO1癌基因的机制,并在肺泡横纹肌肉瘤(aRMS)正位异位移植和患者衍生异种移植(PDX)模型中证实了ENT的临床前疗效。在本研究中,我们研究了 ENT 作为单药或与长春新碱(VCR)联用是否也能在融合阴性 eRMS 正位异位移植和 PDX 模型中发挥抗肿瘤活性:我们测试了ENT和VCR作为单药和联合用药在eRMS异位移植小鼠模型和PDX小鼠模型中的疗效。然后,我们进行了CRISPR筛选,以确定I类HDAC中哪种HDAC对eRMS中的肿瘤生长抑制起作用。为了分析ENT单药治疗或与VCR联合治疗是否会诱导肌源性分化,我们对肿瘤进行了苏木精和伊红(H&E)染色:结果:尽管PDX小鼠模型对VCR的剂量过于敏感,无法检测协同作用,但ENT与化疗药物VCR联合使用,对正位 "异位移植 "的融合阴性eRMS亚群具有协同抗肿瘤活性。涉及 CRISPR 的机制研究表明,HDAC3 抑制是 eRMS 细胞自主细胞还原的主要机制。在体内进行细胞减少后,接受化疗的异体移植模型中的残留肿瘤细胞会在恩替诺斯他的诱导下(70%-100%)急剧转化为非增殖性横纹肌母细胞:我们的研究结果表明,靶向 I 类 HDACs 可为选定的 eRMS 患者带来治疗益处。ENT 的临床前体内疗效使其成为治疗 eRMS 的 II 期临床试验的合理候选药物。
{"title":"Preclinical rationale for entinostat in embryonal rhabdomyosarcoma.","authors":"Narendra Bharathy, Noah E Berlow, Eric Wang, Jinu Abraham, Teagan P Settelmeyer, Jody E Hooper, Matthew N Svalina, Zia Bajwa, Martin W Goros, Brian S Hernandez, Johannes E Wolff, Ranadip Pal, Angela M Davies, Arya Ashok, Darnell Bushby, Maria Mancini, Christopher Noakes, Neal C Goodwin, Peter Ordentlich, James Keck, Douglas S Hawkins, Erin R Rudzinski, Atiya Mansoor, Theodore J Perkins, Christopher R Vakoc, Joel E Michalek, Charles Keller","doi":"10.1186/s13395-019-0198-x","DOIUrl":"10.1186/s13395-019-0198-x","url":null,"abstract":"<p><strong>Background: </strong>Rhabdomyosarcoma (RMS) is the most common soft tissue sarcoma in the pediatric cancer population. Survival among metastatic RMS patients has remained dismal yet unimproved for years. We previously identified the class I-specific histone deacetylase inhibitor, entinostat (ENT), as a pharmacological agent that transcriptionally suppresses the PAX3:FOXO1 tumor-initiating fusion gene found in alveolar rhabdomyosarcoma (aRMS), and we further investigated the mechanism by which ENT suppresses PAX3:FOXO1 oncogene and demonstrated the preclinical efficacy of ENT in RMS orthotopic allograft and patient-derived xenograft (PDX) models. In this study, we investigated whether ENT also has antitumor activity in fusion-negative eRMS orthotopic allografts and PDX models either as a single agent or in combination with vincristine (VCR).</p><p><strong>Methods: </strong>We tested the efficacy of ENT and VCR as single agents and in combination in orthotopic allograft and PDX mouse models of eRMS. We then performed CRISPR screening to identify which HDAC among the class I HDACs is responsible for tumor growth inhibition in eRMS. To analyze whether ENT treatment as a single agent or in combination with VCR induces myogenic differentiation, we performed hematoxylin and eosin (H&E) staining in tumors.</p><p><strong>Results: </strong>ENT in combination with the chemotherapy VCR has synergistic antitumor activity in a subset of fusion-negative eRMS in orthotopic \"allografts,\" although PDX mouse models were too hypersensitive to the VCR dose used to detect synergy. Mechanistic studies involving CRISPR suggest that HDAC3 inhibition is the primary mechanism of cell-autonomous cytoreduction in eRMS. Following cytoreduction in vivo, residual tumor cells in the allograft models treated with chemotherapy undergo a dramatic, entinostat-induced (70-100%) conversion to non-proliferative rhabdomyoblasts.</p><p><strong>Conclusion: </strong>Our results suggest that the targeting class I HDACs may provide a therapeutic benefit for selected patients with eRMS. ENT's preclinical in vivo efficacy makes ENT a rational drug candidate in a phase II clinical trial for eRMS.</p>","PeriodicalId":21747,"journal":{"name":"Skeletal Muscle","volume":"9 1","pages":"12"},"PeriodicalIF":5.3,"publicationDate":"2019-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6528217/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37262066","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exogenous expression of the glycosyltransferase LARGE1 restores α-dystroglycan matriglycan and laminin binding in rhabdomyosarcoma. 外源性糖基转移酶LARGE1的表达恢复了横纹肌肉瘤中α-糖基蛋白和层粘连蛋白的结合。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-05-04 DOI: 10.1186/s13395-019-0195-0
Daniel Beltrán, Mary E Anderson, Narendra Bharathy, Teagan P Settelmeyer, Matthew N Svalina, Zia Bajwa, John F Shern, Sakir H Gultekin, Marco A Cuellar, Takahiro Yonekawa, Charles Keller, Kevin P Campbell

Background: α-Dystroglycan is the highly glycosylated component of the dystrophin-glycoprotein complex (DGC) that binds with high-affinity to extracellular matrix (ECM) proteins containing laminin-G-like (LG) domains via a unique heteropolysaccharide [-GlcA-beta1,3-Xyl-alpha1,3-]n called matriglycan. Changes in expression of components of the DGC or in the O-glycosylation of α-dystroglycan result in muscular dystrophy but are also observed in certain cancers. In mice, the loss of either of two DGC proteins, dystrophin or α-sarcoglycan, is associated with a high incidence of rhabdomyosarcoma (RMS). In addition, glycosylation of α-dystroglycan is aberrant in a small cohort of human patients with RMS. Since both the glycosylation of α-dystroglycan and its function as an ECM receptor require over 18 post-translational processing enzymes, we hypothesized that understanding its role in the pathogenesis of RMS requires a complete analysis of the expression of dystroglycan-modifying enzymes and the characterization of α-dystroglycan glycosylation in the context of RMS.

Methods: A series of cell lines and biopsy samples from human and mouse RMS were analyzed for the glycosylation status of α-dystroglycan and for expression of the genes encoding the responsible enzymes, in particular those required for the addition of matriglycan. Furthermore, the glycosyltransferase LARGE1 was ectopically expressed in RMS cells to determine its effects on matriglycan modifications and the ability of α-dystroglycan to function as a laminin receptor.

Results: Immunohistochemistry and immunoblotting of a collection of primary RMS tumors show that although α-dystroglycan is consistently expressed and glycosylated in these tumors, α-dystroglycan lacks matriglycan and the ability to bind laminin. Similarly, in a series of cell lines derived from human and mouse RMS, α-dystroglycan lacks matriglycan modification and the ability to bind laminin. RNAseq data from RMS cell lines was analyzed for expression of the genes known to be involved in α-dystroglycan glycosylation, which revealed that, for most cell lines, the lack of matriglycan can be attributed to the downregulation of the dystroglycan-modifying enzyme LARGE1. Ectopic expression of LARGE1 in these cell cultures restored matriglycan to levels comparable to those in muscle and restored high-affinity laminin binding to α-dystroglycan.

Conclusions: Collectively, our findings demonstrate that a lack of matriglycan on α-dystroglycan is a common feature in RMS due to the downregulation of LARGE1, and that ectopic expression of LARGE1 can restore matriglycan modifications and the ability of α-dystroglycan to function as an ECM receptor.

背景:α-肌营养不良聚糖是肌营养不良蛋白-糖蛋白复合物(DGC)中高度糖基化的成分,它通过一种独特的异多糖[- glca -beta1,3- xyl -alpha1,3-]n与含有层粘连蛋白-g样(LG)结构域的细胞外基质(ECM)蛋白高亲和力结合。DGC成分的表达或α-糖营养不良的o -糖基化的变化导致肌肉营养不良,但在某些癌症中也观察到。在小鼠中,两种DGC蛋白(肌营养不良蛋白或α-肌聚糖)中的任何一种的缺失与横纹肌肉瘤(RMS)的高发有关。此外,在一小部分RMS患者中,α-糖基化异常。由于α-三磷酸腺苷的糖基化及其作为ECM受体的功能都需要超过18种翻译后加工酶,我们假设了解其在RMS发病机制中的作用需要完整分析RMS背景下α-三磷酸腺苷糖基化修饰酶的表达和表征。方法:对人类和小鼠RMS的一系列细胞系和活检样本进行分析,分析α-三聚糖聚糖的糖基化状态和编码相关酶的基因表达,特别是添加基质多糖所需的基因。此外,糖基转移酶LARGE1在RMS细胞中异位表达,以确定其对基质聚糖修饰的影响以及α-三聚糖聚糖作为层粘连蛋白受体的能力。结果:对原发RMS肿瘤的免疫组织化学和免疫印迹分析显示,尽管α-三磷酸腺苷在这些肿瘤中一致表达并糖基化,但α-三磷酸腺苷缺乏基质聚糖和结合层粘连蛋白的能力。同样,在一系列来源于人和小鼠RMS的细胞系中,α-三磷酸腺苷缺乏基质聚糖修饰和结合层粘连蛋白的能力。我们分析了RMS细胞系的RNAseq数据,分析了已知参与α-三磷酸腺苷糖基化的基因的表达,结果表明,对于大多数细胞系来说,缺乏基质聚糖可归因于三磷酸腺苷糖基化修饰酶LARGE1的下调。在这些细胞培养中,LARGE1的异位表达使基质聚糖恢复到与肌肉中的水平相当的水平,并恢复了高亲和力的层粘连蛋白与α-糖酐的结合。综上所述,我们的研究结果表明,由于LARGE1的下调,RMS中α-三磷酸腺苷缺乏基质蛋白是一个共同的特征,而LARGE1的异位表达可以恢复基质蛋白修饰和α-三磷酸腺苷作为ECM受体的能力。
{"title":"Exogenous expression of the glycosyltransferase LARGE1 restores α-dystroglycan matriglycan and laminin binding in rhabdomyosarcoma.","authors":"Daniel Beltrán,&nbsp;Mary E Anderson,&nbsp;Narendra Bharathy,&nbsp;Teagan P Settelmeyer,&nbsp;Matthew N Svalina,&nbsp;Zia Bajwa,&nbsp;John F Shern,&nbsp;Sakir H Gultekin,&nbsp;Marco A Cuellar,&nbsp;Takahiro Yonekawa,&nbsp;Charles Keller,&nbsp;Kevin P Campbell","doi":"10.1186/s13395-019-0195-0","DOIUrl":"https://doi.org/10.1186/s13395-019-0195-0","url":null,"abstract":"<p><strong>Background: </strong>α-Dystroglycan is the highly glycosylated component of the dystrophin-glycoprotein complex (DGC) that binds with high-affinity to extracellular matrix (ECM) proteins containing laminin-G-like (LG) domains via a unique heteropolysaccharide [-GlcA-beta1,3-Xyl-alpha1,3-]<sub>n</sub> called matriglycan. Changes in expression of components of the DGC or in the O-glycosylation of α-dystroglycan result in muscular dystrophy but are also observed in certain cancers. In mice, the loss of either of two DGC proteins, dystrophin or α-sarcoglycan, is associated with a high incidence of rhabdomyosarcoma (RMS). In addition, glycosylation of α-dystroglycan is aberrant in a small cohort of human patients with RMS. Since both the glycosylation of α-dystroglycan and its function as an ECM receptor require over 18 post-translational processing enzymes, we hypothesized that understanding its role in the pathogenesis of RMS requires a complete analysis of the expression of dystroglycan-modifying enzymes and the characterization of α-dystroglycan glycosylation in the context of RMS.</p><p><strong>Methods: </strong>A series of cell lines and biopsy samples from human and mouse RMS were analyzed for the glycosylation status of α-dystroglycan and for expression of the genes encoding the responsible enzymes, in particular those required for the addition of matriglycan. Furthermore, the glycosyltransferase LARGE1 was ectopically expressed in RMS cells to determine its effects on matriglycan modifications and the ability of α-dystroglycan to function as a laminin receptor.</p><p><strong>Results: </strong>Immunohistochemistry and immunoblotting of a collection of primary RMS tumors show that although α-dystroglycan is consistently expressed and glycosylated in these tumors, α-dystroglycan lacks matriglycan and the ability to bind laminin. Similarly, in a series of cell lines derived from human and mouse RMS, α-dystroglycan lacks matriglycan modification and the ability to bind laminin. RNAseq data from RMS cell lines was analyzed for expression of the genes known to be involved in α-dystroglycan glycosylation, which revealed that, for most cell lines, the lack of matriglycan can be attributed to the downregulation of the dystroglycan-modifying enzyme LARGE1. Ectopic expression of LARGE1 in these cell cultures restored matriglycan to levels comparable to those in muscle and restored high-affinity laminin binding to α-dystroglycan.</p><p><strong>Conclusions: </strong>Collectively, our findings demonstrate that a lack of matriglycan on α-dystroglycan is a common feature in RMS due to the downregulation of LARGE1, and that ectopic expression of LARGE1 can restore matriglycan modifications and the ability of α-dystroglycan to function as an ECM receptor.</p>","PeriodicalId":21747,"journal":{"name":"Skeletal Muscle","volume":"9 1","pages":"11"},"PeriodicalIF":4.9,"publicationDate":"2019-05-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s13395-019-0195-0","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37211067","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
Muscle Gene Sets: a versatile methodological aid to functional genomics in the neuromuscular field. 肌肉基因集:神经肌肉领域功能基因组学的通用方法学辅助。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-05-03 DOI: 10.1186/s13395-019-0196-z
Apostolos Malatras, Stephanie Duguez, William Duddy

Background: The approach of building large collections of gene sets and then systematically testing hypotheses across these collections is a powerful tool in functional genomics, both in the pathway analysis of omics data and to uncover the polygenic effects associated with complex diseases in genome-wide association study. The Molecular Signatures Database includes collections of oncogenic and immunologic signatures enabling researchers to compare transcriptional datasets across hundreds of previous studies and leading to important insights in these fields, but such a resource does not currently exist for neuromuscular research. In previous work, we have shown the utility of gene set approaches to understand muscle cell physiology and pathology.

Methods: Following a systematic survey of public muscle data, we passed gene expression profiles from 4305 samples through a robust pre-processing and standardized data analysis pipeline. Two hundred eighty-two samples were discarded based on a battery of rigorous global quality controls. From among the remaining studies, 578 comparisons of interest were identified by a combination of text mining and manual curation of the study meta-data. For each comparison, significantly dysregulated genes (FDR adjusted p < 0.05) were identified.

Results: Lists of dysregulated genes were divided between upregulated and downregulated to give 1156 Muscle Gene Sets (MGS). This resource is available for download ( www.sys-myo.com/muscle_gene_sets ) and is accessible through three commonly used functional genomics platforms (GSEA, EnrichR, and WebGestalt). Basic guidance and recommendations are provided for the use of MGS through these platforms. In addition, consensus muscle gene sets were created to capture the overlap between the results of similar studies, and analysis of these highlighted the potential for novel disease-relevant findings.

Conclusions: The MGS resource can be used to investigate the behaviour of any list of genes across previous comparisons of muscle conditions, to compare previous studies to one another, and to explore the functional relationship of muscle dysregulation to the Gene Ontology. Its major intended use is in enrichment testing for functional genomics analysis.

背景:建立大量基因集,然后在这些集合中系统地测试假设的方法是功能基因组学的一个强大工具,无论是在组学数据的通路分析中,还是在全基因组关联研究中揭示与复杂疾病相关的多基因效应中。分子特征数据库包括致癌和免疫特征的集合,使研究人员能够比较数百项先前研究的转录数据集,并在这些领域获得重要见解,但目前还不存在用于神经肌肉研究的此类资源。在之前的工作中,我们已经展示了基因集方法在理解肌肉细胞生理学和病理学方面的实用性。方法:在对公共肌肉数据进行系统调查后,我们通过强大的预处理和标准化的数据分析管道,通过4305个样本的基因表达谱。根据严格的全球质量控制,共有二百八十二个样本被丢弃。在剩下的研究中,通过文本挖掘和研究元数据的手动管理相结合,确定了578个感兴趣的比较。对于每次比较,显著失调的基因(FDR调整p 结果:将失调基因列表分为上调和下调,得到1156个肌肉基因集(MGS)。该资源可供下载(www.sys-myo.com/muscle_gene_sets),并可通过三个常用的功能基因组学平台(GSEA、EnrichR和WebGestalt)访问。为通过这些平台使用MGS提供了基本指导和建议。此外,建立了一致的肌肉基因集,以捕捉类似研究结果之间的重叠,对这些结果的分析突出了新的疾病相关发现的潜力。结论:MGS资源可用于研究任何基因列表在先前肌肉状况比较中的行为,将先前的研究相互比较,并探索肌肉失调与基因本体论的功能关系。它的主要用途是用于功能基因组学分析的富集测试。
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引用次数: 8
RNA-sequencing reveals altered skeletal muscle contraction, E3 ligases, autophagy, apoptosis, and chaperone expression in patients with critical illness myopathy. rna测序揭示了危重性肌病患者骨骼肌收缩、E3连接酶、自噬、细胞凋亡和伴侣蛋白表达的改变。
IF 4.9 2区 医学 Q2 CELL BIOLOGY Pub Date : 2019-04-16 DOI: 10.1186/s13395-019-0194-1
Monica Llano-Diez, Wen Fury, Haruka Okamoto, Yu Bai, Jesper Gromada, Lars Larsson

Background: Critical illness myopathy (CIM) is associated with severe skeletal muscle wasting and impaired function in intensive care unit (ICU) patients. The mechanisms underlying CIM remain incompletely understood. To elucidate the biological activities occurring at the transcriptional level in the skeletal muscle of ICU patients with CIM, the gene expression profiles, potential upstream regulators, and enrichment pathways were characterized using RNA sequencing (RNA-seq). We also compared the skeletal muscle gene signatures in ICU patients with CIM and genes perturbed by mechanical loading in one leg of the ICU patients, with an aim of reducing the loss of muscle function.

Methods: RNA-seq was used to assess gene expression changes in tibialis anterior skeletal muscle samples from seven critically ill, immobilized, and mechanically ventilated ICU patients with CIM and matched control subjects. We also examined skeletal muscle gene expression for both legs of six ICU patients with CIM, where one leg was mechanically loaded for 10 h/day for an average of 9 days.

Results: In total, 6257 of 17,221 detected genes were differentially expressed (84% upregulated; p < 0.05 and fold change ≥ 1.5) in skeletal muscle from ICU patients with CIM when compared to control subjects. The differentially expressed genes were highly associated with gene changes identified in patients with myopathy, sepsis, long-term inactivity, polymyositis, tumor, and repeat exercise resistance. Upstream regulator analysis revealed that the CIM signature could be a result of the activation of MYOD1, p38 MAPK, or treatment with dexamethasone. Passive mechanical loading only reversed expression of 0.74% of the affected genes (46 of 6257 genes).

Conclusions: RNA-seq analysis revealed that the marked muscle atrophy and weakness observed in ICU patients with CIM were associated with the altered expression of genes involved in muscle contraction, newly identified E3 ligases, autophagy and calpain systems, apoptosis, and chaperone expression. In addition, MYOD1, p38 MAPK, and dexamethasone were identified as potential upstream regulators of skeletal muscle gene expression in ICU patients with CIM. Mechanical loading only marginally affected the skeletal muscle transcriptome profiling of ICU patients diagnosed with CIM.

背景:重症肌病(CIM)与重症监护病房(ICU)患者严重的骨骼肌萎缩和功能受损有关。CIM背后的机制仍然没有被完全理解。为了阐明CIM ICU患者骨骼肌在转录水平上发生的生物活性,我们使用RNA测序(RNA-seq)对基因表达谱、潜在的上游调控因子和富集途径进行了表征。我们还比较了CIM ICU患者的骨骼肌基因特征和ICU患者一条腿受机械负荷干扰的基因特征,目的是减少肌肉功能的丧失。方法:采用RNA-seq方法评估7例危重、固定和机械通气ICU患者和匹配对照组的胫骨前骨骼肌样本的基因表达变化。我们还检测了6名ICU CIM患者两条腿的骨骼肌基因表达,其中一条腿机械负荷10小时/天,平均9天。结果:在17,221个检测到的基因中,总共有6257个基因差异表达(84%上调;p结论:RNA-seq分析显示,CIM ICU患者明显的肌肉萎缩和无力与参与肌肉收缩的基因表达改变、新发现的E3连接酶、自噬和钙蛋白酶系统、细胞凋亡和伴侣蛋白表达有关。此外,MYOD1、p38 MAPK和地塞米松被确定为CIM ICU患者骨骼肌基因表达的潜在上游调节因子。机械负荷仅轻微影响诊断为CIM的ICU患者的骨骼肌转录组谱。
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引用次数: 33
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Skeletal Muscle
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