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The Clinical View of Sepsis-Associated AKI: How Basic Science Can Help Solve This Problem 败血症相关AKI的临床观点:基础科学如何帮助解决这一问题。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-10 DOI: 10.1016/j.semnephrol.2025.151665
James D. Odum MD, MEd , Denise C. Hasson MD , Natalja L. Stanski MD, MS , Hernando Gómez MD, MPH , Danielle E. Soranno MD
The global health impact of sepsis is difficult to understate. As a complication of sepsis, the development of sepsis-associated acute kidney injury (SA-AKI) significantly increases the risk of mortality. Although several epidemiological risk factors for SA-AKI are known, the heterogeneity of this syndrome—across patients, pathogens, and treatment responses—has hindered therapeutic innovation and contributed to persistently poor outcomes. Precision medicine offers a promising framework to address this complexity, yet a substantial translational gap remains between mechanistic insights from preclinical models and the therapeutic strategies used in clinical practice. To bridge this gap, researchers should consider aligning preclinical models with human sepsis and embrace SA-AKI heterogeneity to identify treatable, mechanistically informed subtypes (endotypes). These efforts could enable the development of personalized therapies aimed at reducing the burden of SA-AKI.
败血症对全球健康的影响难以低估。作为脓毒症的并发症,脓毒症相关急性肾损伤(SA-AKI)的发生显著增加了死亡风险。尽管已知SA-AKI的几个流行病学危险因素,但该综合征在患者、病原体和治疗反应方面的异质性阻碍了治疗创新,并导致了持续的不良结果。精准医学为解决这种复杂性提供了一个有希望的框架,然而,临床前模型的机制见解与临床实践中使用的治疗策略之间仍存在实质性的转化差距。为了弥补这一差距,研究人员应该考虑将临床前模型与人类脓毒症结合起来,并接受SA-AKI异质性,以确定可治疗的、机制知情的亚型(内源性)。这些努力可以促进个性化治疗的发展,旨在减轻SA-AKI的负担。Semin Nephrol 36:x-xx©20XX Elsevier Inc.。版权所有。
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引用次数: 0
A Holistic Approach to AKI: Integrating Clinical and Molecular Data in the Human Kidney AKI的整体方法:整合人类肾脏的临床和分子数据。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-08 DOI: 10.1016/j.semnephrol.2025.151663
Jennifer A. Schaub MD, Mathew Alaba MS, Matthias Kretzler MD
Despite intensive research efforts, acute kidney injury (AKI) is a common clinical syndrome that has limited treatment options apart from supportive care. The increasing availability of molecular interrogation data from patients with Acute Kidney Injury provides an unparalleled opportunity to leverage systems biology approaches. In this review, we discuss the challenges with AKI research, explain how systems biology approaches can link molecular data to clinical phenotypes, review available molecular interrogation tools and techniques, and provide examples where systems biology approaches have been successfully applied in nephrology.
尽管进行了大量的研究,急性肾损伤(AKI)是一种常见的临床综合征,除了支持性护理外,治疗选择有限。来自急性肾损伤患者的分子询问数据的日益增加的可用性为利用系统生物学方法提供了无与伦比的机会。在这篇综述中,我们讨论了AKI研究面临的挑战,解释了系统生物学方法如何将分子数据与临床表型联系起来,回顾了可用的分子询问工具和技术,并提供了系统生物学方法成功应用于肾脏病学的例子。Semin Nephrol 36:x-xx©20XX Elsevier Inc.。版权所有。
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引用次数: 0
High Environmental Heat Exposure Is a Risk Factor for Acute Kidney Injury and Chronic Kidney Disease 高环境热暴露是急性肾损伤和慢性肾脏疾病的危险因素。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-05 DOI: 10.1016/j.semnephrol.2025.151664
Hung Nguyen MS , Bryan K. Becker PhD , Subhashini Bolisetty PhD , Malgorzata Kasztan PhD , Paul W. Sanders MD , Kelly A. Hyndman PhD
Chronic kidney disease of unknown etiology has been reported in Mesoamerican regions and other parts of the world, with increasing evidence pointing to heat stress as a central contributing factor. The incidence of acute kidney injury appears to correlate strongly with heat exposure, as demonstrated in both human and animal studies. The underlying mechanisms of heat-induced kidney injury are likely multifactorial, involving hemodynamic changes, immune responses, and possibly coagulopathies. However, the precise pathways remain unclear, highlighting the urgent need for a deeper understanding of the mechanisms and for developing strategies to prevent or mitigate renal damage. This is particularly important not only for heat-exposed occupational groups, such as agricultural workers, military personnel, and athletes, but also for the general population, who are increasingly vulnerable to extreme heat events every year.
在中美洲地区和世界其他地区已经报道了病因不明的慢性肾脏疾病,越来越多的证据表明热应激是一个主要的促成因素。急性肾损伤的发生率似乎与热暴露密切相关,正如在人类和动物研究中所证明的那样。热致肾损伤的潜在机制可能是多因素的,包括血流动力学改变、免疫反应和可能的凝血功能障碍。然而,确切的途径仍然不清楚,强调迫切需要更深入地了解机制和制定策略来预防或减轻肾脏损害。这不仅对暴露于高温的职业群体,如农业工人、军事人员和运动员,而且对每年越来越容易受到极端高温事件影响的普通人群尤其重要。Semin Nephrol 36:x-xx©20XX Elsevier Inc.。版权所有。
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引用次数: 0
Using Large Genomic Biobanks to Generate Insights into Genetic Kidney Disease 利用大型基因组生物库来深入了解遗传性肾脏疾病。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-01 DOI: 10.1016/j.semnephrol.2025.151651
Alexander R. Chang MD, MS , Janewit Wongboonsin MD, MS , Andrew J. Mallett MBBS, MMed, PhD , Ana Morales MS, CGC , Kyle Retterer MS , Tooraj Mirshahi PhD , John A. Sayer MB, ChB, PhD
Chronic kidney disease (CKD) affects approximately 9% of the global population, leading to increased risks of end-stage kidney disease (ESKD), cardiovascular disease (CVD), and mortality. Patients with CKD are a huge burden on health care resources globally. CKD is a complex condition influenced by a combination of genetic, environmental, and traditional risk factors. Family studies have suggested heritability rates for CKD ranging from 30% to 75%, and large genomic biobank studies have proven essential in identifying genes with substantial effects on CKD risk and in capturing cumulative genetic risk through polygenic risk scores. These biobanks are crucial for discovering new genes associated with kidney health and disease, and their growing size enhances the power to detect novel genetic associations. Integrating multi-omics technologies such as transcriptomics, metabolomics, and proteomics further enriches our understanding of CKD, while advanced computational tools continue to expand our insights into genetic data. Polygenic risk scores, derived from hundreds of genetic variants with small effect sizes, can help identify individuals at high risk of CKD. Genomic biobanks offer valuable opportunities for early identification and personalized treatment of monogenic kidney disorders, such as autosomal dominant polycystic kidney disease and Alport syndrome. These biobanks help fill knowledge gaps, particularly in individuals with milder or asymptomatic presentations who are often underrepresented in traditional studies. Expanding genomic biobank efforts globally, especially in diverse populations, is vital to enhancing our understanding of the genetic underpinnings of kidney disease. This review highlights the significant contributions of genomic biobanks to advancing our comprehension of the genetics of CKD.
慢性肾脏疾病(CKD)影响全球约9%的人口,导致终末期肾脏疾病(ESKD)、心血管疾病(CVD)和死亡率的风险增加。慢性肾病患者是全球卫生保健资源的巨大负担。CKD是一种复杂的疾病,受遗传、环境和传统危险因素的综合影响。家族研究表明CKD的遗传率从30%到75%不等,大型基因组生物库研究已被证明对于识别对CKD风险有重大影响的基因和通过多基因风险评分捕获累积遗传风险至关重要。这些生物库对于发现与肾脏健康和疾病相关的新基因至关重要,它们的规模不断扩大,增强了检测新遗传关联的能力。整合多组学技术,如转录组学、代谢组学和蛋白质组学,进一步丰富了我们对CKD的理解,而先进的计算工具继续扩展我们对遗传数据的见解。多基因风险评分来源于数百种具有小效应的遗传变异,可以帮助识别CKD高风险个体。基因组生物库为单基因肾病的早期识别和个性化治疗提供了宝贵的机会,如常染色体显性多囊肾病和阿尔波特综合征。这些生物库有助于填补知识空白,特别是那些在传统研究中往往代表性不足的症状较轻或无症状的个体。在全球范围内,特别是在不同人群中扩大基因组生物库的工作,对于增强我们对肾脏疾病遗传基础的理解至关重要。这篇综述强调了基因组生物库对促进我们对CKD遗传学的理解的重要贡献。Semin Nephrol 36:x-xx©20XX Elsevier Inc.。版权所有。
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引用次数: 0
Integration of Genetics Into the Design and Conduct of Clinical Trials in Nephrology 将遗传学纳入肾脏病临床试验的设计和实施。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-01 DOI: 10.1016/j.semnephrol.2025.151650
Justyna E. Ozimek-Kulik , Nicholas G. Larkins , Gopi K. Rangan , Hugh J. McCarthy
Advances in genomic diagnostics have enabled earlier and more precise identification of genetic kidney disease, but the translation of these insights into trial methodology and therapeutic development has lagged. This review examines the current challenges in nephrology trials—including disease heterogeneity, slow progression, and limited industry engagement—and explores how genomic information can address these barriers. Examples from trials in autosomal dominant polycystic kidney disease and other genetic kidney diseases demonstrate the feasibility and value of genomics-informed approaches, including genotype-based recruitment, post hoc genetic stratification, and drug repurposing. The emergence of genotype stratification, artificial intelligence tools, and gene-based therapies presents further opportunities to refine trial design and personalize treatment. However, incorporating genomics into clinical research also raises complex ethical and regulatory issues, including consent processes, data governance, and equitable access to testing and trial participation. As genomic testing becomes embedded in standard clinical practice, its alignment with clinical research infrastructure offers the potential to create a learning health system in nephrology. Realizing this potential will require cross-disciplinary coordination, international collaboration, and co-design with patients and communities. Integrating genetic nephrology into clinical trial conduct is not only feasible but essential to advancing precision medicine and improving outcomes for patients with kidney disease.
基因组诊断的进步使遗传肾脏疾病的早期和更精确的识别成为可能,但将这些见解转化为试验方法和治疗开发却滞后。本文综述了肾脏病试验中当前面临的挑战,包括疾病异质性、进展缓慢和有限的行业参与,并探讨了基因组信息如何解决这些障碍。来自常染色体显性多囊肾病和其他遗传性肾病的试验实例证明了基因组学知情方法的可行性和价值,包括基于基因型的招募、特设遗传分层和药物再利用。基因型分层、人工智能工具和基因疗法的出现为完善试验设计和个性化治疗提供了进一步的机会。然而,将基因组学纳入临床研究也引发了复杂的伦理和监管问题,包括同意程序、数据治理以及公平获得测试和试验参与。随着基因组检测成为标准临床实践的一部分,它与临床研究基础设施的结合提供了在肾脏病学中创建学习型卫生系统的潜力。实现这一潜力需要跨学科的协调、国际合作以及与患者和社区的共同设计。将遗传肾脏病学纳入临床试验不仅可行,而且对于推进精准医学和改善肾脏疾病患者的预后至关重要。
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引用次数: 0
Genetic Nephrology – Key Foundations for Kidney Medicine 遗传肾脏病学-肾脏医学的关键基础。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-01 DOI: 10.1016/j.semnephrol.2025.151661
Janewit Wongboonsin, Andrew J. Mallett
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引用次数: 0
Educating the Next-Generation Expert in Nephrology Genetics 培养下一代肾病遗传学专家。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-01 DOI: 10.1016/j.semnephrol.2025.151648
Matthew B. Lanktree , Shaymaa Shurrab , Resham Ejaz , Vanda McNiven , Lauren Brick , Nithiakishna Selvathesan , Peter Margetts , Azim Gangji , Marie Pigeyre , Alexander Chang , Christie P. Thomas , Mathieu Lemaire
The importance of genetics and genomics in general nephrology has rapidly ascended within the last decade. While the genetic literacy of all nephrologists must improve, there is a particular need to develop the next generation of leaders and educators in nephrology genetics. In this review, we summarize how nephrology genetics could fit into the nephrology landscape and discuss components of a nephrology genetics training program. We outline potential objectives and educational content for a nephrology genetics curriculum. Finally, we identify logistical challenges and potential solutions when educating the next-generation expert in nephrology genetics.
遗传学和基因组学在普通肾脏病学中的重要性在过去十年中迅速上升。虽然所有肾病学家的遗传素养必须提高,但特别需要培养下一代肾病遗传学的领导者和教育家。在这篇综述中,我们总结了肾脏病遗传学如何融入肾脏病学领域,并讨论了肾脏病遗传学培训计划的组成部分。我们概述了肾脏遗传学课程的潜在目标和教育内容。最后,我们确定后勤挑战和潜在的解决方案,当教育下一代肾病遗传学专家。Semin Nephrol 36:x-xx©20XX Elsevier Inc.。版权所有。
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引用次数: 0
Complexities in Variant Analysis, Classification, and Interpretation in Kidney Disease–Related Genes 肾脏疾病相关基因变异分析、分类和解释的复杂性。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-01 DOI: 10.1016/j.semnephrol.2025.151646
Maggie Westemeyer MS, CGC , Michelle S. Bloom PhD , Alicia B. Byrne PhD , Vivek Charu MD, PhD
Advancements in chronic kidney disease (CKD) genetic research and next-generation sequencing have improved CKD diagnosis and personalized treatment. Broad gene panel testing or whole exome/genome sequencing has greatly improved understanding of the genetic etiology of kidney disease but has also increased the complexity of interpretation. Standardized variant classification guidelines help, but challenges remain due to subjective evidence and limited functional and phenotypic data. Careful consideration of genetic and clinical evidence, along with collaboration between clinicians, genetics experts, and laboratories, is essential for accurate interpretation and patient care. This article examines nephrology genetic testing, focusing on the complexities of variant analysis, classification, and interpretation. Variant classification in monogenic kidney diseases is crucial for accurate diagnosis and patient management. We outline the classification methods highlighting several variant examples using the ACMG/AMP framework and quantitative approaches for pathogenicity assessment. We highlight challenges in integrating genetic findings into nephrology and emphasize the clinical impact of accurate genetic diagnoses for precision medicine in CKD.
慢性肾脏疾病(CKD)基因研究和下一代测序的进展改善了CKD的诊断和个性化治疗。广泛的基因面板检测或全外显子组/基因组测序极大地提高了对肾脏疾病遗传病因的理解,但也增加了解释的复杂性。标准化的变异分类指南有所帮助,但由于主观证据和有限的功能和表型数据,挑战仍然存在。仔细考虑遗传和临床证据,以及临床医生、遗传学专家和实验室之间的合作,对于准确的解释和患者护理至关重要。这篇文章探讨了肾脏病基因检测,重点是变异分析、分类和解释的复杂性。单基因肾病的变异分类对准确诊断和患者管理至关重要。我们概述了分类方法,重点介绍了使用ACMG/AMP框架和定量方法进行致病性评估的几个变体示例。我们强调了将遗传学发现整合到肾脏病学中的挑战,并强调了准确的遗传学诊断对CKD精准医学的临床影响。
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引用次数: 0
Gene-Disease Relationships in Kidney Genetics 肾脏遗传学中的基因-疾病关系。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-01 DOI: 10.1016/j.semnephrol.2025.151647
Vanessa Gitau BS , Julie Ratliff BS, MPH , Ryan Webb BS , Andrew J. Mallett MD PhD , Pamela Ajuyah PhD
Genomic sequencing technologies are used in diagnostic laboratories to identify genetic causes of disease in patients. Gene curation plays an integral role by determining which genes have sufficient evidence for inclusion in diagnostic panels and those that should be prioritized in genome and exome sequencing. As the precursor to variant curation, gene curation also establishes pathogenicity limits for variant classification. Evaluating the clinical validity of a gene–disease relationship requires assessment of genetic and experimental evidence from literature and databases. The Clinical Genome Resource (ClinGen) has a semiquantitative framework for gene curation that is used across its Gene Curation Expert Panels (GCEPs). The ClinGen Kidney Disease Clinical Domain Working Group oversees five GCEPs covering the glomerulopathies, tubulopathies, complement-mediated kidney diseases, congenital anomalies of the kidney and urinary tract, and renal ciliopathies. These panels use a multidisciplinary approach in their gene curations, which are published and accessible to the public via the ClinGen website. ClinGen’s expert-informed curations and other resources outlined in this review will help nephrologists validate whether genetic findings in reports are clinically relevant to their patients. Empowering nephrologists with knowledge of gene curation principles is imperative for informed decision-making in patient care.
基因组测序技术被用于诊断实验室,以确定患者疾病的遗传原因。基因管理通过确定哪些基因有足够的证据可以纳入诊断小组,哪些基因应该在基因组和外显子组测序中优先考虑,发挥着不可或缺的作用。作为变异管理的先驱,基因管理还建立了变异分类的致病性限制。评估基因-疾病关系的临床有效性需要评估来自文献和数据库的遗传和实验证据。临床基因组资源(ClinGen)有一个基因管理的半定量框架,用于其基因管理专家小组(gcep)。ClinGen肾脏疾病临床领域工作组负责监督五个GCEPs,涵盖肾小球疾病、小管疾病、补体介导的肾脏疾病、肾脏和尿路先天性异常以及肾纤毛病。这些小组在他们的基因管理中使用多学科方法,这些方法通过ClinGen网站发布并向公众开放。ClinGen的专家指导和本综述中概述的其他资源将帮助肾病学家验证报告中的遗传发现是否与患者临床相关。赋予肾病学家基因治疗原则的知识是必要的知情决策在病人护理。Semin Nephrol 36:x-xx©20XX Elsevier Inc.。版权所有。
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引用次数: 0
Models of Care for the Implementation of Genetic Testing in Nephrology 肾病学中实施基因检测的护理模式。
IF 3.5 3区 医学 Q2 UROLOGY & NEPHROLOGY Pub Date : 2025-09-01 DOI: 10.1016/j.semnephrol.2025.151649
Dervla M. Connaughton MB, BCh, BAOI, LRCP&SI, MSc, PhD , Andrew J. Mallett MBBS, MMed, PhD, CF, AFRACMA, FISN, FASN, FRCP, FRACP
Genetic testing holds great potential to enhance the diagnosis and management of kidney disease, yet its integration into routine nephrology care remains limited and often delayed. Despite strong evidence supporting its clinical utility and cost effectiveness, significant barriers hinder its widespread adoption. This review examines care models designed to embed genetic testing into nephrology practice and proposes strategies to improve access for chronic kidney disease patients. Key approaches include enhancing clinical genetic services, establishing kidney genetics clinics, using technology such as virtual consultations, forming variant review boards and multidisciplinary teams, and mainstreaming genetic testing into nephrology care. For each model, the review identifies essential components for success and discusses barriers and facilitators to implementation. By focusing on practical, scalable, and patient-centered solutions, this review advocates for a paradigm shift in nephrology care. It envisions genetic testing as a standard component of kidney disease management, aiming to improve outcomes and promote equitable care for patients globally.
基因检测在提高肾脏疾病的诊断和管理方面具有巨大的潜力,但它与常规肾脏学护理的结合仍然有限,而且经常被推迟。尽管有强有力的证据支持其临床效用和成本效益,但重大障碍阻碍了其广泛采用。本综述考察了旨在将基因检测嵌入肾脏病实践的护理模式,并提出了改善慢性肾病患者可及性的策略。关键方法包括加强临床遗传服务,建立肾脏遗传学诊所,利用虚拟咨询等技术,组建变异审查委员会和多学科小组,以及将基因检测纳入肾脏病治疗的主流。对于每个模型,审查确定了成功的基本组成部分,并讨论了实施的障碍和促进因素。通过关注实用的、可扩展的、以患者为中心的解决方案,本综述倡导肾病学护理的范式转变。它设想将基因检测作为肾脏疾病管理的标准组成部分,旨在改善结果并促进全球患者的公平护理。
{"title":"Models of Care for the Implementation of Genetic Testing in Nephrology","authors":"Dervla M. Connaughton MB, BCh, BAOI, LRCP&SI, MSc, PhD ,&nbsp;Andrew J. Mallett MBBS, MMed, PhD, CF, AFRACMA, FISN, FASN, FRCP, FRACP","doi":"10.1016/j.semnephrol.2025.151649","DOIUrl":"10.1016/j.semnephrol.2025.151649","url":null,"abstract":"<div><div>Genetic testing holds great potential to enhance the diagnosis and management of kidney disease, yet its integration into routine nephrology care remains limited and often delayed. Despite strong evidence supporting its clinical utility and cost effectiveness, significant barriers hinder its widespread adoption. This review examines care models designed to embed genetic testing into nephrology practice and proposes strategies to improve access for chronic kidney disease patients. Key approaches include enhancing clinical genetic services, establishing kidney genetics clinics, using technology such as virtual consultations, forming variant review boards and multidisciplinary teams, and mainstreaming genetic testing into nephrology care. For each model, the review identifies essential components for success and discusses barriers and facilitators to implementation. By focusing on practical, scalable, and patient-centered solutions, this review advocates for a paradigm shift in nephrology care. It envisions genetic testing as a standard component of kidney disease management, aiming to improve outcomes and promote equitable care for patients globally.</div></div>","PeriodicalId":21756,"journal":{"name":"Seminars in nephrology","volume":"45 5","pages":"Article 151649"},"PeriodicalIF":3.5,"publicationDate":"2025-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144650317","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Seminars in nephrology
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