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Rab22a regulates the establishment of epithelial polarity. Rab22a调控上皮极性的建立。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-07-01 Epub Date: 2020-04-17 DOI: 10.1080/21541248.2020.1754104
Isabella R Blum, Caroline Behling-Hess, Marco Padilla-Rodriguez, Samina Momtaz, Christopher Cox, Jean M Wilson

Membrane trafficking establishes and maintains epithelial polarity. Rab22a has a polarized distribution in activated T-cells, but its role in epithelial polarity has not been investigated. We showed previously that Rab14 acts upstream of Arf6 to establish the apical membrane initiation site (AMIS), but its interaction with Rab22a is unknown. Here we show that Rab14 and Rab22a colocalize in endosomes of both unpolarized and polarized MDCK cells and Rab22a localizes to the cell:cell interface of polarizing cell pairs. Knockdown of Rab22a results in a multi-lumen phenotype in three-dimensional culture. Further, overexpression of Rab22a in Rab14 knockdown cells rescues the multi-lumen phenotype observed with Rab14 knockdown, suggesting that Rab22a is downstream of Rab14. Because of the relationship between Rab14 and Arf6, we investigated the effect of Rab22a knockdown on Arf6. We find that Rab22a knockdown results in decreased active Arf6 and that Rab22a co-immunoprecipitates with the Arf6 GEF EFA6. In addition, EFA6 is retained in intracellular puncta in Rab22a KD cells. These results suggest that Rab22a acts downstream of Rab14 to traffic EFA6 to the AMIS to regulate Arf6 in the establishment of polarity.

膜运输建立并维持上皮极性。Rab22a在活化的t细胞中具有极化分布,但其在上皮极性中的作用尚未被研究。我们之前发现Rab14作用于Arf6上游,建立了顶端膜起始位点(AMIS),但其与Rab22a的相互作用尚不清楚。本研究表明,Rab14和Rab22a在未极化和极化MDCK细胞的内体中都有共定位,Rab22a定位在极化细胞对的细胞界面上。敲低Rab22a在三维培养中导致多腔表型。此外,Rab22a在Rab14敲低细胞中的过表达挽救了Rab14敲低所观察到的多腔表型,这表明Rab22a是Rab14的下游。由于Rab14和Arf6之间的关系,我们研究了Rab22a敲低对Arf6的影响。我们发现Rab22a敲低导致活性Arf6降低,并且Rab22a与Arf6 GEF EFA6共免疫沉淀。此外,在Rab22a KD细胞中,EFA6保留在细胞内点上。这些结果表明,Rab22a作用于Rab14的下游,将EFA6传输到AMIS,从而调节Arf6极性的建立。
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引用次数: 2
Selection of established tumour cells through narrow diameter micropores enriches for elevated Ras/Raf/MEK/ERK MAPK signalling and enhanced tumour growth. 通过窄直径微孔选择已确定的肿瘤细胞,可富集升高的 Ras/Raf/MEK/ERK MAPK 信号并促进肿瘤生长。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-07-01 Epub Date: 2020-06-22 DOI: 10.1080/21541248.2020.1780108
Dominika A Rudzka, Susan Mason, Matthew Neilson, Lynn McGarry, Gabriela Kalna, Ann Hedley, Karen Blyth, Michael F Olson

As normal cells become cancer cells, and progress towards malignancy, they become progressively softer. Advantages of this change are that tumour cells become more deformable, and better able to move through narrow constraints. We designed a positive selection strategy that enriched for cells which could move through narrow diameter micropores to identify cell phenotypes that enabled constrained migration. Using human MDA MB 231 breast cancer and MDA MB 435 melanoma cancer cells, we found that micropore selection favoured cells with relatively higher Ras/Raf/MEK/ERK mitogen-activated protein kinase (MAPK) signalling, which affected actin cytoskeleton organization, focal adhesion density and cell elasticity. In this follow-up study, we provide further evidence that selection through micropores enriched for cells with altered cell morphology and adhesion. Additional analysis of RNA sequencing data revealed a set of transcripts associated with small cell size that was independent of constrained migration. Gene set enrichment analysis identified the 'matrisome' as the most significantly altered gene set linked with small size. When grown as orthotopic xenograft tumours in immunocompromised mice, micropore selected cells grew significantly faster than Parent or Flow-Sorted cells. Using mathematical modelling, we determined that there is an interaction between 1) the cell to gap size ratio; 2) the bending rigidity of the cell, which enable movement through narrow gaps. These results extend our previous conclusion that Ras/Raf/MEK/ERK MAPK signalling has a significant role in regulating cell biomechanics by showing that the selective pressure of movement through narrow gaps also enriches for increased tumour growth in vivo.

当正常细胞变成癌细胞,并向恶性发展时,它们会变得越来越柔软。这种变化的好处是,肿瘤细胞变得更易变形,更能在狭窄的限制条件下移动。我们设计了一种正向选择策略,富集能够通过狭窄直径微孔移动的细胞,以识别能够实现受限迁移的细胞表型。我们利用人体 MDA MB 231 乳腺癌和 MDA MB 435 黑色素瘤癌细胞,发现微孔选择有利于 Ras/Raf/MEK/ERK 丝裂原活化蛋白激酶(MAPK)信号相对较高的细胞,这影响了肌动蛋白细胞骨架组织、病灶粘附密度和细胞弹性。在这项后续研究中,我们提供了进一步的证据,证明通过微孔选择的细胞具有改变的细胞形态和粘附性。对 RNA 测序数据的其他分析显示,一组转录本与细胞体积小有关,与受限迁移无关。基因组富集分析发现,"matrisome "是与细胞体积小有关的变化最显著的基因组。在免疫力低下的小鼠体内生长为正位异种移植肿瘤时,微孔选择细胞的生长速度明显快于母细胞或流式细胞。通过数学建模,我们确定:1)细胞与间隙的大小比;2)细胞的弯曲刚度之间存在相互作用,这使得细胞能在狭窄的间隙中移动。这些结果扩展了我们之前的结论,即 Ras/Raf/MEK/ERK MAPK 信号在调节细胞生物力学方面起着重要作用,表明通过狭窄间隙运动的选择性压力也会增加体内肿瘤的生长。
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引用次数: 0
A regulatory role of membrane by direct modulation of the catalytic kinase domain. 膜通过直接调节催化激酶结构域的调节作用。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-07-01 Epub Date: 2020-07-14 DOI: 10.1080/21541248.2020.1788886
Priyanka Prakash

Cell membrane modulates the function and activity of specific proteins and acts more than just a non-specific scaffolding machinery. In this review, I focus on studies that highlight a direct membrane-mediated modulation of the catalytic kinase domain of a variety of kinases thereby regulating the kinase activity. It emerges that membrane provides a second level of regulation once kinase domain is relieved of its inactive auto-inhibitory state. For the first time a generalized regulatory role of membrane is proposed that governs the kinase activity by modulating the catalytic kinase domain. Striking similarities among a variety of multi-domain kinases as well as single-domain lipidated enzymes such as RAS proteins are presented.

细胞膜调节特定蛋白质的功能和活性,而不仅仅是一个非特异性支架机械。在这篇综述中,我着重于强调直接膜介导的多种激酶的催化激酶结构域的调节,从而调节激酶活性的研究。一旦激酶结构域解除其无活性的自抑制状态,膜提供了第二级调节。首次提出了膜的广义调控作用,即通过调节催化激酶结构域来调控激酶活性。在多种多结构域激酶以及单结构域脂化酶(如RAS蛋白)之间存在惊人的相似性。
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引用次数: 2
A functional antagonism between RhoJ and Cdc42 regulates fibronectin remodelling during angiogenesis. RhoJ和Cdc42之间的功能性拮抗调节血管生成过程中的纤维连接蛋白重构。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-07-01 Epub Date: 2020-08-28 DOI: 10.1080/21541248.2020.1809927
Ananthalakshmy Sundararaman, Harry Mellor

Angiogenesis is the formation of new blood vessels from pre-existing ones. Angiogenesis requires endothelial cells to change shape and polarity, as well as acquire the ability to directionally migrate ‒ processes that are classically regulated by the Rho family of GTPases. RhoJ (previously TCL) is an endothelium enriched Rho GTPase with a 78% amino acid similarity to the ubiquitously expressed Cdc42. In our recent publication, we demonstrate that α5β1 integrin co-traffics with RhoJ. RhoJ specifically represses the internalization of the active α5β1 conformer, leading to a reduced ability of endothelial cells to form fibronectin fibrils. Surprisingly, this function of RhoJ is in opposition to the role of Cdc42, a known driver of fibrillogenesis. Intriguingly, we discovered that the competition for limiting amounts of the shared effector, PAK3, could explain the ability of these two Rho GTPases to regulate fibrillogenesis in opposing directions. Consequently, RhoJ null mice show excessive fibronectin deposition around retinal vessels, possibly due to the unopposed action of Cdc42. Our work suggests that the functional antagonism between RhoJ and Cdc42 could restrict fibronectin remodelling to sites of active angiogenesis to form a provisional matrix for vessel growth. One correlate of our findings is that RhoJ dependent repression of fibronectin remodelling could be atheroprotective in quiescent vessels.

血管生成是指从已有的血管中形成新的血管。血管生成需要内皮细胞改变形状和极性,以及获得定向迁移的能力,这些过程通常由GTPases的Rho家族调节。RhoJ(以前的TCL)是内皮富集的Rho GTPase,与普遍表达的Cdc42具有78%的氨基酸相似性。在我们最近发表的文章中,我们证明α5β1整合素与RhoJ共交通。RhoJ特异性抑制活性α5β1构象的内化,导致内皮细胞形成纤维连接蛋白原纤维的能力降低。令人惊讶的是,RhoJ的这种功能与Cdc42的作用相反,Cdc42是一种已知的纤维纤维化驱动因子。有趣的是,我们发现对有限数量的共享效应物PAK3的竞争可以解释这两种Rho gtpase在相反方向调节纤维形成的能力。因此,RhoJ缺失小鼠在视网膜血管周围表现出过多的纤维连接蛋白沉积,这可能是由于Cdc42的不对抗作用。我们的研究表明,RhoJ和Cdc42之间的功能性拮抗作用可以将纤维连接蛋白的重塑限制在血管生成活跃的部位,从而形成血管生长的临时基质。我们的研究结果的一个关联是,依赖于RhoJ的纤维连接蛋白重塑的抑制可能对静止血管具有动脉粥样硬化保护作用。
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引用次数: 6
Targeting effector pathways in RAC1P29S-driven malignant melanoma. rac1p29s驱动的恶性黑色素瘤靶向效应通路
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-07-01 Epub Date: 2020-02-17 DOI: 10.1080/21541248.2020.1728469
Cristina Uribe-Alvarez, Sandra Lucía Guerrero-Rodríguez, Jennifer Rhodes, Alexa Cannon, Jonathan Chernoff, Daniela Araiza-Olivera

Malignant melanoma is characterized by mutations in a number of driver genes, most notably BRAF and NRAS. Recent genomic analyses revealed that 4-9% of sun-exposed melanomas bear activating mutations in RAC1, which encodes a small GTPase that is known to play key roles in cell proliferation, survival, and migration. The RAC1 protein activates several effector pathways, including Group A p21-activated kinases (PAKs), phosphoinositol-3-kinases (PI3Ks), in particular the beta isoform, and the serum-response factor/myocardin-related transcription factor (SRF/MRTF). Having previously shown that inhibition of Group A PAKs impedes oncogenic signalling from RAC1P29S, we here extend this analysis to examine the roles of PI3Ks and SRF/MRTF in melanocytes and/or in a zebrafish model. We demonstrate that a selective Group A PAK inhibitor (Frax-1036), a pan-PI3K (BKM120), and two PI3Kβ inhibitors (TGX221, GSK2636771) impede the growth of melanoma cells driven by mutant RAC1 but not by mutant BRAF, while other PI3K selective inhibitors, including PI3Kα, δ and γ, are less effective. Using these compounds as well as an SRF/MRTF inhibitor (CCG-203,971), we observed similar results in vivo, using embryonic zebrafish development as a readout. These results suggest that targeting Group A PAKs, PI3Kβ, and/or SRF/MRTF represent a promising approach to suppress RAC1 signalling in malignant melanoma.

恶性黑色素瘤的特点是许多驱动基因发生突变,最显著的是BRAF和NRAS。最近的基因组分析显示,4-9%的暴露在阳光下的黑色素瘤在RAC1中具有激活突变,该突变编码一个小的GTPase,已知在细胞增殖,存活和迁移中起关键作用。RAC1蛋白激活多种效应通路,包括A组p21活化激酶(PAKs)、磷酸肌醇-3激酶(PI3Ks),特别是β亚型,以及血清反应因子/心肌素相关转录因子(SRF/MRTF)。在之前的研究中,A组PAKs的抑制抑制了RAC1P29S的致癌信号传导,我们在此扩展了这一分析,以研究pi3k和SRF/MRTF在黑素细胞和/或斑马鱼模型中的作用。我们证明了一种选择性的a组PAK抑制剂(Frax-1036),一种泛PI3K抑制剂(BKM120)和两种PI3Kβ抑制剂(TGX221, GSK2636771)可以抑制突变型RAC1驱动的黑色素瘤细胞的生长,而其他PI3K选择性抑制剂,包括PI3Kα, δ和γ,效果较差。使用这些化合物以及SRF/MRTF抑制剂(CCG-203,971),我们在体内观察到类似的结果,使用胚胎斑马鱼发育作为读数。这些结果表明,靶向A组PAKs、PI3Kβ和/或SRF/MRTF是抑制恶性黑色素瘤中RAC1信号传导的一种有希望的方法。
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引用次数: 9
Cdc42 promotes Bgs1 recruitment for septum synthesis and glucanase localization for cell separation during cytokinesis in fission yeast. 在分裂酵母细胞分裂过程中,Cdc42促进Bgs1募集用于隔膜合成和葡聚糖酶定位用于细胞分离。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-07-01 Epub Date: 2020-03-22 DOI: 10.1080/21541248.2020.1743926
Udo N Onwubiko, Julie Rich-Robinson, Rose Albu Mustaf, Maitreyi E Das

Cytokinesis in fission yeast involves actomyosin ring constriction concurrent to septum synthesis followed by septum digestion resulting in cell separation. A recent report indicates that endocytosis is required for septum synthesis and cell separation. The conserved GTPase Cdc42 is required for membrane trafficking and promotes endocytosis. Cdc42 is activated by Guanine nucleotide exchange factors (GEFs). Cdc42 GEFs have been shown to promote timely initiation of septum synthesis and proper septum morphology. Here we show that Cdc42 promotes the recruitment of the major primary septum synthesizing enzyme Bgs1 and consequent ring constriction. Cdc42 is also required for proper localization of the septum digesting glucanases at the division site. Thus, Cdc42 is required to promote multiple steps during cytokinesis.

分裂酵母的细胞分裂包括肌动球蛋白环收缩与隔膜合成同时发生,随后隔膜消化导致细胞分离。最近的一份报告表明,内吞作用是隔膜合成和细胞分离所必需的。保守的GTPase Cdc42是膜运输和促进内吞作用所必需的。Cdc42被鸟嘌呤核苷酸交换因子(GEFs)激活。Cdc42 gef已被证明可以促进鼻中隔合成的及时启动和鼻中隔的适当形态。在这里,我们发现Cdc42促进主要初级隔膜合成酶Bgs1的募集和随之而来的环收缩。Cdc42对于在分裂部位消化葡聚糖酶的隔膜的适当定位也是必需的。因此,需要Cdc42来促进细胞分裂过程中的多个步骤。
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引用次数: 6
Exploring a role for fatty acid synthase in prostate cancer cell migration. 探讨脂肪酸合酶在前列腺癌细胞迁移中的作用。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-07-01 Epub Date: 2020-10-12 DOI: 10.1080/21541248.2020.1826781
Mario De Piano, Valeria Manuelli, Giorgia Zadra, Massimo Loda, Gordon Muir, Ash Chandra, Jonathan Morris, Mieke Van Hemelrijck, Claire M Wells

Fatty acid synthase (FASN) is commonly overexpressed in prostate cancer and associated with tumour progression. FASN is responsible for de novo synthesis of the fatty acid palmitate; the building block for protein palmitoylation. A functional role for FASN in regulating cell proliferation is widely accepted. We recently reported that FASN activity can also mediate prostate cancer HGF-mediated cell motility. Moreover, we found that modulation of FASN expression specifically impacts on the palmitoylation of RhoU. Findings we will describe here. We now report that loss of FASN expression also impairs HGF-mediated cell dissociation responses. Taken together our results provide compelling evidence that FASN activity directly promotes cell migration and supports FASN as a potential therapeutic target in metastatic prostate cancer.

脂肪酸合成酶(FASN)在前列腺癌中普遍过表达,并与肿瘤进展相关。FASN负责棕榈酸脂肪酸的从头合成;蛋白质棕榈酰化的组成部分。FASN在调节细胞增殖中的功能作用已被广泛接受。我们最近报道了FASN活性也可以介导前列腺癌hgf介导的细胞运动。此外,我们发现FASN表达的调节特异性地影响RhoU的棕榈酰化。我们将在这里描述这些发现。我们现在报道FASN表达的缺失也会损害hgf介导的细胞解离反应。综上所述,我们的研究结果提供了令人信服的证据,证明FASN活性直接促进细胞迁移,并支持FASN作为转移性前列腺癌的潜在治疗靶点。
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引用次数: 6
Complementary functions for the Ran gradient during division. 除法时Ran梯度的互补函数。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-05-01 Epub Date: 2020-02-14 DOI: 10.1080/21541248.2020.1725371
Imge Ozugergin, Alisa Piekny

The Ran pathway has a well-described function in nucleocytoplasmic transport, where active Ran dissociates importin/karyopherin-bound cargo containing a nuclear localization signal (NLS) in the nucleus. As cells enter mitosis, the nuclear envelope breaks down and a gradient of active Ran forms where levels are highest near chromatin. This gradient plays a crucial role in regulating mitotic spindle assembly, where active Ran binds to and releases importins from NLS-containing spindle assembly factors. An emerging theme is that the Ran gradient also regulates the actomyosin cortex for processes including polar body extrusion during meiosis, and cytokinesis. For these events, active Ran could play an inhibitory role, where importin-binding may help promote or stabilize a conformation or interaction that favours the recruitment and function of cortical regulators. For either spindle assembly or cortical polarity, the gradient of active Ran determines the extent of importin-binding, the effects of which could vary for different proteins.

Ran途径在核细胞质运输中具有良好的功能,其中活性Ran在细胞核中解离含有核定位信号(NLS)的输入蛋白/核丝蛋白结合的货物。当细胞进入有丝分裂时,核膜破裂,在染色质附近形成活性Ran的梯度,其水平最高。这种梯度在调节有丝分裂纺锤体组装中起着至关重要的作用,其中活性Ran与含有nls的纺锤体组装因子结合并释放进口蛋白。一个新兴的主题是,Ran梯度也调节肌动球蛋白皮层的过程,包括减数分裂和细胞质分裂期间的极体挤压。对于这些事件,活性Ran可能发挥抑制作用,其中进口蛋白结合可能有助于促进或稳定有利于皮质调节因子募集和功能的构象或相互作用。无论是纺锤体组装还是皮质极性,活性Ran的梯度决定了进口蛋白结合的程度,其影响可能因蛋白质而异。
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引用次数: 12
Analysis of Ras-effector interaction competition in large intestine and colorectal cancer context. 大肠和结直肠癌背景下ras -效应物相互作用竞争分析。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-05-01 Epub Date: 2020-02-14 DOI: 10.1080/21541248.2020.1724596
Verónica Ibáňez Gaspar, Simona Catozzi, Camille Ternet, Philip J Luthert, Christina Kiel

Cancer is the second leading cause of death globally, and colorectal cancer (CRC) is among the five most common cancers. The small GTPase KRAS is an oncogene that is mutated in ~30% of all CRCs. Pharmacological treatments of CRC are currently unsatisfactory, but much hope rests on network-centric approaches to drug development and cancer treatment. These approaches, however, require a better understanding of how networks downstream of Ras oncoproteins are connected in a particular tissue context - here colon and CRC. Previously we have shown that competition for binding to a 'hub' protein, such as Ras, can induce a rewiring of signal transduction networks. In this study, we analysed 56 established and predicted effectors that contain a structural domain with the potential ability to bind to Ras oncoproteins and their link to pathways coordinating intestinal homoeostasis and barrier function. Using protein concentrations in colon tissue and Ras-effector binding affinities, a computational network model was generated that predicted how effectors differentially and competitively bind to Ras in colon context. The model also predicted both qualitative and quantitative changes in Ras-effector complex formations with increased levels of active Ras - to simulate its upregulation in cancer - simply as an emergent property of competition for the same binding interface on the surface of Ras. We also considered how the number of Ras-effector complexes at the membrane can be increased by additional domains present in some effectors that are recruited to the membrane in response to specific conditions (inputs/stimuli/growth factors) in colon context and CRC.

癌症是全球第二大死亡原因,结直肠癌(CRC)是五种最常见的癌症之一。小GTPase KRAS是在约30%的crc中发生突变的致癌基因。目前对结直肠癌的药物治疗并不令人满意,但更多的希望寄托在以网络为中心的药物开发和癌症治疗方法上。然而,这些方法需要更好地了解Ras癌蛋白的下游网络如何在特定的组织环境中连接-这里是结肠和结直肠癌。先前我们已经证明,与“中枢”蛋白(如Ras)结合的竞争可以诱导信号转导网络的重新布线。在这项研究中,我们分析了56种已建立和预测的效应物,这些效应物包含一个结构域,具有与Ras癌蛋白结合的潜在能力,以及它们与协调肠道平衡和屏障功能的途径的联系。利用结肠组织中的蛋白质浓度和Ras-效应物的结合亲和力,生成了一个计算网络模型,该模型预测了效应物如何在结肠环境中差异和竞争性地与Ras结合。该模型还预测了随着活性Ras水平的增加,Ras效应复合物形成的定性和定量变化——以模拟其在癌症中的上调——仅仅是Ras表面上相同结合界面竞争的一种新特性。我们还考虑了在结肠环境和结直肠癌中,一些效应物在响应特定条件(输入/刺激/生长因子)时被募集到膜上的额外结构域如何增加膜上ras效应物复合物的数量。
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引用次数: 15
ARL3, a small GTPase with a functionally conserved role in primary cilia and immune synapses. ARL3,一个小的GTPase,在初级纤毛和免疫突触中具有功能保守的作用。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-05-01 Epub Date: 2019-12-18 DOI: 10.1080/21541248.2019.1703466
Laura Powell, Youhani H Samarakoon, Shehab Ismail, John A Sayer

The primary cilium and the immunological synapse are both specialized functional plasma membrane domains that share several similarities. Signalling output of membrane domains is regulated, spatially and temporally, by segregating and focusing lipids and proteins. ARL3, a small GTPase, plays a major role in concentrating lipid-modified proteins in both the immunological synapse and the primary cilia. Here in this review we will introduce the role of ARL3 in health and disease and its role in polarizing signalling at the primary cilia and immunological synapses.

初级纤毛和免疫突触都是具有特殊功能的质膜结构域,它们有许多相似之处。膜结构域的信号输出通过脂质和蛋白质的分离和聚焦在空间和时间上受到调节。ARL3是一种小的GTPase,在免疫突触和初级纤毛的脂质修饰蛋白集中中起主要作用。在本文中,我们将介绍ARL3在健康和疾病中的作用及其在初级纤毛和免疫突触的极化信号传导中的作用。
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引用次数: 0
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