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COVID-19 mortality in 1984 Bhopal gas tragedy survivors: implications for chemically exposed populations. 1984 年博帕尔毒气悲剧幸存者的 COVID-19 死亡率:对接触化学品人群的影响。
IF 2.2 4区 医学 Q2 Medicine Pub Date : 2024-04-08 DOI: 10.1093/trstmh/trae010
Rachna Dhingra, S. Sarangi, Pranab Chatterjee, Arkaprabha Gun, Swarup Sarkar
Leakage of methyl isocyanate from the Union Carbide plant in Bhopal, India, killed thousands and left deleterious trans-generational effects. Gas-exposed populations experience higher rates of lung and metabolic diseases, and immune dysregulation, all associated with adverse outcomes in coronavirus disease 2019 (COVID-19). We used publicly available, official data from government sources to estimate COVID-19-associated crude mortality in populations with and without a history of gas exposure. Overall, there were 1240 deaths among patients hospitalized with known COVID-19 in Bhopal, of which 453 (36.53%) were in gas-exposed individuals, 726 (58.55%) were in gas-unexposed individuals and the exposure status of 61 (4.92%) individuals could not be determined. There were 351 and 375 deaths in gas-unexposed people in the first (April 2020-February 2021) and second (March 2021-July 2021) waves, respectively; in the gas-exposed population, there were 300 and 153 deaths in the two respective waves. The overall annualized crude mortality of COVID-19 was 3.84 (95% CI 3.41 to 4.33) times higher in the gas-exposed population at 83.6 (95% CI 76.1 to 91.7) per 100 000 compared with the gas-unexposed population, at 21.8 (95% CI 20.2 to 23.4) per 100,000. When stratified by age, compared with unexposed people, the gas-exposed individuals experienced 1.88 (95% CI 1.61 to 2.21) and 1.24 (95% CI 1.02 to 1.50) times the mortality rates in the age groups of 35-65 and >65 y, respectively. These findings indicate that gas-exposed individuals are likely to have a higher risk of severe COVID-19 and death and need to be specifically targeted and recognized for preventive and promotive efforts.
印度博帕尔的联合碳化物工厂泄漏的异氰酸甲酯造成数千人死亡,并留下了有害的跨代影响。接触过毒气的人群患肺病、代谢性疾病和免疫失调的比例较高,这些都与 2019 年冠状病毒疾病(COVID-19)的不良后果有关。我们利用政府来源的公开官方数据,估算了有煤气暴露史和无煤气暴露史人群中与 COVID-19 相关的粗死亡率。总体而言,博帕尔市因已知 COVID-19 而住院的患者中有 1240 人死亡,其中 453 人(36.53%)接触过毒气,726 人(58.55%)未接触过毒气,61 人(4.92%)的接触状况无法确定。在第一波(2020 年 4 月至 2021 年 2 月)和第二波(2021 年 3 月至 2021 年 7 月)中,未暴露于煤气的人群分别有 351 人和 375 人死亡;在暴露于煤气的人群中,两波分别有 300 人和 153 人死亡。与未暴露于气体的人群每 10 万人 21.8 例(95% CI 20.2 至 23.4 例)的死亡率相比,暴露于气体的人群每 10 万人 83.6 例(95% CI 76.1 至 91.7 例)的 COVID-19 总年化粗死亡率高出 3.84 倍(95% CI 3.41 至 4.33 倍)。如果按年龄分层,与未暴露于气体的人群相比,暴露于气体的人群在 35-65 岁和大于 65 岁年龄组的死亡率分别是未暴露于气体人群的 1.88 倍(95% CI 1.61 至 2.21)和 1.24 倍(95% CI 1.02 至 1.50)。这些研究结果表明,接触过煤气的人患严重 COVID-19 和死亡的风险可能较高,因此需要专门针对并认识到这一点来开展预防和促进工作。
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引用次数: 0
Lack of controlled studies on snakebite prevention: a rapid review. 缺乏预防蛇咬的对照研究:快速回顾。
IF 2.2 4区 医学 Q2 Medicine Pub Date : 2024-04-06 DOI: 10.1093/trstmh/trad088
Chaturaka Rodrigo, Ariaranee Gnanathasan

Globally, snakebites cause an estimated 80 000-140 000 deaths annually. While there are evidence-based recommendations for managing snakebite victims, recommendations on the prevention of snakebites are limited to expert opinions. We conducted a rapid review to summarise evidence from human studies with a control group on preventing snakebites. Searching PubMed, Web of Science, Scopus, CINAHL and EMBASE with inclusive search terms without language or time limits only yielded three eligible studies (one case control study and two prospective controlled clinical studies), highlighting a knowledge gap. Two studies in Nepal by the same group showed that health education of stakeholders and sleeping under a bednet can significantly reduce snakebite incidence (p<0.05), but these observations are not confirmed elsewhere, and because of the high risk of bias the certainty of evidence was low. The third study from Sri Lanka, which assessed if sleeping above ground would prevent snakebites, had inconclusive results. This demonstrates an urgent need for studies with a control group to guide evidence-based recommendations for snakebite prevention. Potential interventions tested can range from low-cost measures such as wearing appropriate footwear in resource-limited settings to testing the efficacy of chemical, biological (e.g. rodent control) or device-based methods and community-supported platforms tracking snakebite sightings with real-time geolocation data in highly resourced settings.

在全球范围内,蛇咬伤每年估计造成 80 000-140 000 人死亡。虽然在处理蛇咬伤患者方面有循证建议,但关于预防蛇咬伤的建议却仅限于专家意见。我们进行了一次快速回顾,总结了有对照组的人类研究中有关预防蛇咬的证据。我们在PubMed、Web of Science、Scopus、CINAHL和EMBASE上进行了无语言和时间限制的搜索,只找到了三项符合条件的研究(一项病例对照研究和两项前瞻性临床对照研究),凸显了知识空白。同一研究小组在尼泊尔进行的两项研究表明,对利益相关者进行健康教育和睡在蚊帐里可显著降低蛇咬伤发病率(p
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引用次数: 0
Cost-effectiveness of One Health interventions for rabies elimination: a systematic review. One Health消除狂犬病干预措施的成本效益:一项系统综述。
IF 2.2 4区 医学 Q2 Medicine Pub Date : 2024-04-06 DOI: 10.1093/trstmh/trad074
Zinia T Nujum, Miqdad Asaria, Karishma Krishna Kurup, Malathi Mini, Sumit Mazumdar, Monal Daptardar, Harish Tiwari

The 'One Health' (OH) approach is the most promising idea in realising the global goal of eliminating canine-mediated human rabies by 2030. However, taking an OH approach to rabies elimination can mean many different things to different people. We conducted a systematic review scrutinizing economic evaluations (EEs) retrieved from MEDLINE OVID, Embase OVID, Global Health OVID, CINAHL EBSCO and ECONLIT EBSCO that used the OH approach with the intent of identifying cost-effective sets of interventions that can be combined to implement an optimal OH-based rabies elimination program and highlight key gaps in the knowledge base. Our review suggests that an optimal OH program to tackle rabies should incorporate mass dog vaccination and integrated bite case management in combination with efficient use of post-exposure prophylaxis along with a shift to a 1-week abbreviated intradermal rabies vaccine regimen in humans. We recommend that future EEs of OH interventions for rabies elimination should be performed alongside implementation research to ensure proposed interventions are feasible and adopt a wider societal perspective taking into account costs and outcomes across both the human health and animal welfare sectors. The systematic review has been registered with PROSPERO.

“一个健康”(OH)方法是实现到2030年消除犬类介导的人类狂犬病全球目标的最有希望的想法。然而,采用OH方法消除狂犬病对不同的人来说可能意味着很多不同的事情。我们对从MEDLINE OVID、Embase OVID、Global Health OVID、CINAHL EBSCO和ECONLIT EBSCO检索到的经济评估(EEs)进行了系统审查,这些评估使用了OH方法,目的是确定一组具有成本效益的干预措施,这些干预措施可以结合起来实施最佳的基于OH的狂犬病消除计划,并强调知识库中的关键差距。我们的综述表明,应对狂犬病的最佳OH计划应包括大规模犬类疫苗接种和综合咬伤病例管理,结合有效使用暴露后预防,以及在人类中转向为期1周的缩短皮内狂犬病疫苗方案。我们建议,未来消除狂犬病的OH干预措施的EEs应与实施研究一起进行,以确保拟议的干预措施是可行的,并从更广泛的社会角度考虑人类健康和动物福利部门的成本和结果。系统审查已在PROSPERO注册。
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引用次数: 0
Epidemiological survey, molecular profiling and phylogenetic analysis of cutaneous leishmaniasis in Khyber Pakhtunkhwa, Pakistan. 巴基斯坦开伯尔-普赫图赫瓦省皮肤利什曼病的流行病学调查、分子分析和系统发育分析。
IF 2.2 4区 医学 Q2 Medicine Pub Date : 2024-04-06 DOI: 10.1093/trstmh/trad086
Wasia Ullah, Adil Khan, Sadaf Niaz, Maged A Al-Garadi, Nasreen Nasreen, Ayman A Swelum, Mourad Ben Said

Background: Cutaneous leishmaniasis (CL), an emerging vector-borne ailment in Khyber Pakhtunkhwa (KPK), Pakistan, exhibits diverse spread patterns and outbreaks.

Methods: To comprehend its epidemiology and identify parasite species, we conducted an active survey on suspected CL cases (n=8845) in KPK.

Results: Microscopy and internal transcribed spacer-1 PCR-restriction fragment length polymorphism (RFLP) molecular techniques detected Leishmania spp. in blood samples. Phylogenetic analysis gauged genetic affinities with other areas. District Bannu displayed the highest CL impact (14.58%), while Swat had the lowest impact (4.33%) among cases. Annual blood examination rate, parasite incidence and slide positivity rate were 4.96 per 1000 people, 0.0233 and 0.047%, respectively. CL infections were prevalent in 1- to 20-y-olds, with males (57.17%) more vulnerable than females (42.82%). Single lesions occurred in 43.73% of patients, while 31.2% people had two lesions, 17.31% had three lesions and 7.74% had more than three lesions. Most had sand-fly exposure but lacked preventive measures like repellents and bed nets. Leishmania tropica was confirmed via RFLP analysis in amplified samples. Phylogenetic analysis unveiled genetic parallels between L. tropica of KPK and isolates from China, Iran, Afghanistan, India, Syria and Morocco.

Conclusions: Urgent comprehensive control measures are imperative. Early detection, targeted interventions and raising awareness of CL and sand-fly vectors are vital for reducing the disease's impact. International collaboration and monitoring are crucial to tackle Leishmania spp.'s genetic diversity and curtail its cross-border spread.

背景:皮肤利什曼病(CL)是巴基斯坦开伯尔-普赫图赫瓦省(KPK)一种新出现的媒介传播疾病,呈现出多种传播模式和暴发。方法:对KPK地区8845例疑似CL病例进行主动调查,了解其流行病学及寄生虫种类。结果:镜检和内转录间隔-1 pcr -限制性片段长度多态性(RFLP)技术在血样中检出利什曼原虫。系统发育分析测量了与其他区域的遗传亲和性。病例中,班努区CL影响最大(14.58%),斯瓦特区影响最小(4.33%)。年血检率为4.96 / 1000,寄生虫发病率为0.0233 / 1000,载玻片阳性率为0.047%。CL感染多见于1 ~ 20岁人群,男性(57.17%)易感染,女性(42.82%)易感染。43.73%的患者出现单一病变,31.2%的患者出现2个病变,17.31%的患者出现3个病变,7.74%的患者出现3个以上病变。大多数人都接触过白蛉,但缺乏驱蚊剂和蚊帐等预防措施。扩增样品经RFLP分析证实为热带利什曼原虫。系统发育分析显示,KPK的热带乳杆菌与来自中国、伊朗、阿富汗、印度、叙利亚和摩洛哥的分离株遗传相似。结论:紧急采取综合防治措施势在必行。早期发现、有针对性的干预和提高对疟疾和白蛉病媒的认识对于减少该病的影响至关重要。国际合作和监测对于解决利什曼原虫的遗传多样性和限制其跨境传播至关重要。
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引用次数: 0
Impact of lamivudine treatment in late pregnancy on the development of the foetal immune response to hepatitis B virus: a meta-analysis in R with the metafor package. 妊娠晚期拉米夫定治疗对胎儿对乙型肝炎病毒免疫反应的影响:一项包含meta包的R荟萃分析
IF 1.9 4区 医学 Q3 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2024-04-06 DOI: 10.1093/trstmh/trad084
Peng Zhao, Ying Zhao, Minmin Du, Xiuying Chen, Yongchao Lu

Background: Hepatitis B virus (HBV) infection is a worldwide public health burden, especially in Asia and Africa. Concerns were raised that foetal exposure to HBV and antiretroviral therapy (ART) might suppress the innate immune response and reduce the production of hepatitis B surface antibody (HBsAb) in foetuses and infants. We therefore conducted the current study to evaluate the impact of ART on the development of the immune response to HBV in foetuses and infants.

Methods: We selected lamivudine instead of telbivudine or tenofovir as the intervention measurement because it was the oldest and most widely used ART during pregnancy and its safety data have been sufficiently documented. A comprehensive search was conducted in eight electronic databases, including four Chinese and four English databases. Studies that met the following eligibility criteria were included: human randomized controlled trials (RCTs); participants in the treatment group were exclusively exposed to lamivudine; participants in the control group were exposed to placebo, no treatment or hepatitis B immunoglobulin; all participants were HBV-positive pregnant women with a high viral load and the main outcome of interest was neonatal HBsAb seropositivity. Data were tabulated and analysed using R software.

Results: Nine RCTs were included and analysed. Compared with controls, lamivudine significantly decreased HBsAb seronegativity in the newborn within 24 h after birth (indicating the foetal immune response to HBV). Similar results were noted in infants within 6-7 months after birth and infants within 12 months (indicating the neonatal immune response to HBV vaccine).

Conclusions: Lamivudine treatment in late pregnancy boosted the foetal immune response to HBV in utero and enhanced the neonatal immune response to hepatitis B vaccine after birth.

背景:乙型肝炎病毒(HBV)感染是一个全球性的公共卫生负担,特别是在亚洲和非洲。胎儿暴露于HBV和抗逆转录病毒治疗(ART)可能会抑制先天免疫反应,减少胎儿和婴儿乙型肝炎表面抗体(HBsAb)的产生,这引起了人们的关注。因此,我们进行了目前的研究,以评估抗逆转录病毒治疗对胎儿和婴儿HBV免疫反应发展的影响。方法:我们选择拉米夫定代替替比夫定或替诺福韦作为干预措施,因为拉米夫定是妊娠期间最古老和最广泛使用的抗逆转录病毒药物,其安全性数据有充分的记录。全面检索了8个电子数据库,包括4个中文数据库和4个英文数据库。符合以下资格标准的研究被纳入:人类随机对照试验(rct);治疗组的参与者完全暴露于拉米夫定;对照组的参与者暴露于安慰剂、不治疗或乙肝免疫球蛋白;所有参与者均为hbv阳性且病毒载量高的孕妇,主要研究结果为新生儿HBsAb血清阳性。数据用R软件制表和分析。结果:纳入并分析了9项随机对照试验。与对照组相比,拉米夫定在新生儿出生后24小时内显著降低HBsAb血清阴性(表明胎儿对HBV的免疫应答)。在出生后6-7个月内的婴儿和12个月内的婴儿中也发现了类似的结果(表明新生儿对HBV疫苗的免疫反应)。结论:妊娠晚期拉米夫定治疗可增强胎儿在子宫内对HBV的免疫应答,并增强新生儿出生后对乙肝疫苗的免疫应答。
{"title":"Impact of lamivudine treatment in late pregnancy on the development of the foetal immune response to hepatitis B virus: a meta-analysis in R with the metafor package.","authors":"Peng Zhao, Ying Zhao, Minmin Du, Xiuying Chen, Yongchao Lu","doi":"10.1093/trstmh/trad084","DOIUrl":"10.1093/trstmh/trad084","url":null,"abstract":"<p><strong>Background: </strong>Hepatitis B virus (HBV) infection is a worldwide public health burden, especially in Asia and Africa. Concerns were raised that foetal exposure to HBV and antiretroviral therapy (ART) might suppress the innate immune response and reduce the production of hepatitis B surface antibody (HBsAb) in foetuses and infants. We therefore conducted the current study to evaluate the impact of ART on the development of the immune response to HBV in foetuses and infants.</p><p><strong>Methods: </strong>We selected lamivudine instead of telbivudine or tenofovir as the intervention measurement because it was the oldest and most widely used ART during pregnancy and its safety data have been sufficiently documented. A comprehensive search was conducted in eight electronic databases, including four Chinese and four English databases. Studies that met the following eligibility criteria were included: human randomized controlled trials (RCTs); participants in the treatment group were exclusively exposed to lamivudine; participants in the control group were exposed to placebo, no treatment or hepatitis B immunoglobulin; all participants were HBV-positive pregnant women with a high viral load and the main outcome of interest was neonatal HBsAb seropositivity. Data were tabulated and analysed using R software.</p><p><strong>Results: </strong>Nine RCTs were included and analysed. Compared with controls, lamivudine significantly decreased HBsAb seronegativity in the newborn within 24 h after birth (indicating the foetal immune response to HBV). Similar results were noted in infants within 6-7 months after birth and infants within 12 months (indicating the neonatal immune response to HBV vaccine).</p><p><strong>Conclusions: </strong>Lamivudine treatment in late pregnancy boosted the foetal immune response to HBV in utero and enhanced the neonatal immune response to hepatitis B vaccine after birth.</p>","PeriodicalId":23218,"journal":{"name":"Transactions of The Royal Society of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2024-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138483026","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prevalence of Cryptosporidium and microsporidial infection in HIV-infected individuals. 艾滋病毒感染者中隐孢子虫和微孢子虫感染的流行率。
IF 2.2 4区 医学 Q2 Medicine Pub Date : 2024-04-06 DOI: 10.1093/trstmh/trad090
Hasan Didarlu, Mahmoud Mahami-Oskouei, Mojtaba Varshochi, Kareem Hatam-Nahavandi, Firooz Shahrivar, Saeed Bahadory, Aleksandra Barac, Ehsan Ahmadpour

Background: Microsporidia and Cryptosporidium are obligate intracellular protozoa. These medically important species are recognized as opportunistic organisms in intestinal complications in human immunodeficiency virus (HIV)/acquired immunodeficiency syndrome patients.

Methods: The current cross-sectional study was designed and conducted from August 2016 to August 2017 to determine intestinal Cryptosporidium and microsporidia spp. in HIV-infected individuals from the Behavioral Diseases Counseling Center, Tabriz, Iran, by modified acid-fast and modified trichrome staining and nested polymerase chain reaction (PCR) and real-time PCR.

Results: Of 100 HIV-infected persons, 21.0% (95% confidence interval [CI] 13.0 to 30.0) and 18.0% (95% CI 11.0 to 26.0) were identified as Cryptosporidium and microsporidia, respectively, by the microscopic method. Of these 100 HIV-infected persons, 18.0% (95% CI 11.0 to 26.0) and 14.0% (95% CI 7.0 to 22.0) were positive for Cryptosporidium and microsporidia, respectively, by the molecular method. The predominant species of microsporidia in patients was Enterocytozoon bieneusi (85.7% [95% CI 57.0 to 98.0]) and Encephalitozoon cuniculi (14.3% [95% CI 1.7 to 42.0]), which were found by quantitative real-time PCR and its high-resolution melting tool.

Conclusions: As far as we know, this study is the first to estimate the prevalence of infection with Cryptosporidium and microsporidia among HIV-infected persons in northwest of Iran. The prevalence of intestinal microsporidiosis and cryptosporidiosis in this area in HIV-infected people was higher than the global prevalence of infection among immunocompromised patients. In addition to the need for further studies to prove protozoan pathogenicity in the aforementioned group, preventive measures should be considered.

背景:小孢子虫和隐孢子虫是细胞内原生动物。这些在医学上具有重要意义的物种被认为是人类免疫缺陷病毒(HIV)/获得性免疫缺陷综合征患者肠道并发症的机会性微生物:本次横断面研究设计并实施于2016年8月至2017年8月,目的是通过改良酸-ast染色法和改良三色染色法以及巢式聚合酶链反应(PCR)和实时PCR检测伊朗大不里士行为疾病咨询中心HIV感染者的肠道隐孢子虫和小孢子虫属:在 100 名艾滋病毒感染者中,通过显微镜方法分别有 21.0%(95% 置信区间 [CI] 13.0 至 30.0)和 18.0%(95% 置信区间 [CI] 11.0 至 26.0)的人被鉴定为隐孢子虫和小孢子虫。在这 100 名艾滋病病毒感染者中,通过分子方法,分别有 18.0%(95% CI 11.0 至 26.0)和 14.0%(95% CI 7.0 至 22.0)的隐孢子虫和小孢子虫呈阳性。通过实时定量 PCR 及其高分辨率熔解工具发现,患者体内主要的微孢子虫种类是生物肠虫(Enterocytozoon bieneusi,85.7% [95% CI 57.0 至 98.0])和阴沟肠虫(Encephalitozoon cuniculi,14.3% [95% CI 1.7 至 42.0]):据我们所知,这项研究是首次估算伊朗西北部艾滋病毒感染者中隐孢子虫和小孢子虫感染率的研究。该地区艾滋病病毒感染者肠道微孢子虫病和隐孢子虫病的感染率高于全球免疫力低下患者的感染率。除了需要进一步研究证明原生动物在上述人群中的致病性外,还应考虑采取预防措施。
{"title":"Prevalence of Cryptosporidium and microsporidial infection in HIV-infected individuals.","authors":"Hasan Didarlu, Mahmoud Mahami-Oskouei, Mojtaba Varshochi, Kareem Hatam-Nahavandi, Firooz Shahrivar, Saeed Bahadory, Aleksandra Barac, Ehsan Ahmadpour","doi":"10.1093/trstmh/trad090","DOIUrl":"10.1093/trstmh/trad090","url":null,"abstract":"<p><strong>Background: </strong>Microsporidia and Cryptosporidium are obligate intracellular protozoa. These medically important species are recognized as opportunistic organisms in intestinal complications in human immunodeficiency virus (HIV)/acquired immunodeficiency syndrome patients.</p><p><strong>Methods: </strong>The current cross-sectional study was designed and conducted from August 2016 to August 2017 to determine intestinal Cryptosporidium and microsporidia spp. in HIV-infected individuals from the Behavioral Diseases Counseling Center, Tabriz, Iran, by modified acid-fast and modified trichrome staining and nested polymerase chain reaction (PCR) and real-time PCR.</p><p><strong>Results: </strong>Of 100 HIV-infected persons, 21.0% (95% confidence interval [CI] 13.0 to 30.0) and 18.0% (95% CI 11.0 to 26.0) were identified as Cryptosporidium and microsporidia, respectively, by the microscopic method. Of these 100 HIV-infected persons, 18.0% (95% CI 11.0 to 26.0) and 14.0% (95% CI 7.0 to 22.0) were positive for Cryptosporidium and microsporidia, respectively, by the molecular method. The predominant species of microsporidia in patients was Enterocytozoon bieneusi (85.7% [95% CI 57.0 to 98.0]) and Encephalitozoon cuniculi (14.3% [95% CI 1.7 to 42.0]), which were found by quantitative real-time PCR and its high-resolution melting tool.</p><p><strong>Conclusions: </strong>As far as we know, this study is the first to estimate the prevalence of infection with Cryptosporidium and microsporidia among HIV-infected persons in northwest of Iran. The prevalence of intestinal microsporidiosis and cryptosporidiosis in this area in HIV-infected people was higher than the global prevalence of infection among immunocompromised patients. In addition to the need for further studies to prove protozoan pathogenicity in the aforementioned group, preventive measures should be considered.</p>","PeriodicalId":23218,"journal":{"name":"Transactions of The Royal Society of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2024-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138886075","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of a computational model for mycetoma-causative agents identification. 评估霉菌瘤致病因子识别计算模型。
IF 2.2 4区 医学 Q2 Medicine Pub Date : 2024-04-06 DOI: 10.1093/trstmh/trad057
Hyam Omar Ali, Romain Abraham, Guillaume Desoubeaux, Ahmed H Fahal, Clovis Tauber

Background: The therapeutic strategy for mycetoma relies heavily on the identification of the causative agents, which are either fungal or bacterial. While histopathological examination of surgical biopsies is currently the most used diagnostic tool, it requires well-trained pathologists, who are lacking in most rural areas where mycetoma is endemic. In this work we propose and evaluate a machine learning approach that semi-automatically analyses histopathological microscopic images of grains and provides a classification of the disease as eumycetoma or actinomycetoma.

Methods: The computational model is based on radiomics and partial least squares. It is assessed on a dataset that includes 890 individual grains collected from 168 patients originating from the Mycetoma Research Centre in Sudan. The dataset contained 94 eumycetoma cases and 74 actinomycetoma cases, with a distribution of the species among the two causative agents that is representative of the Sudanese distribution.

Results: The proposed model achieved identification of causative agents with an accuracy of 91.89%, which is comparable to the accuracy of experts from the domain. The method was found to be robust to a small error in the segmentation of the grain and to changes in the acquisition protocol. Among the radiomics features, the homogeneity of mycetoma grain textures was found to be the most discriminative feature for causative agent identification.

Conclusion: The results presented in this study support that this computational approach could greatly benefit rural areas with limited access to specialized clinical centres and also provide a second opinion for expert pathologists to implement the appropriate therapeutic strategy.

背景:霉菌瘤的治疗策略在很大程度上取决于致病菌的鉴定,这些致病菌要么是真菌,要么是细菌。虽然手术活检的组织病理学检查是目前最常用的诊断工具,但这需要训练有素的病理学家,而在霉菌瘤流行的大多数农村地区却缺乏这样的人才。在这项工作中,我们提出并评估了一种机器学习方法,该方法可半自动分析谷物的组织病理学显微图像,并将疾病分类为真菌瘤或放线菌瘤:计算模型基于放射组学和偏最小二乘法。方法:计算模型基于放射组学和偏最小二乘法,在一个数据集上对其进行了评估,该数据集包括从苏丹霉菌瘤研究中心的 168 名患者身上收集的 890 个颗粒。该数据集包含 94 个真菌瘤病例和 74 个放线菌瘤病例,两种致病菌的种类分布在苏丹具有代表性:结果:所提出的模型识别病原体的准确率为 91.89%,与该领域专家的准确率相当。该方法对谷粒分割中的微小误差和采集方案的改变具有很强的鲁棒性。在放射组学特征中,霉菌瘤颗粒纹理的均匀性被认为是对病原体识别最具鉴别力的特征:本研究的结果表明,这种计算方法可以极大地惠及专业临床中心服务有限的农村地区,还可以为病理专家提供第二意见,以实施适当的治疗策略。
{"title":"Evaluation of a computational model for mycetoma-causative agents identification.","authors":"Hyam Omar Ali, Romain Abraham, Guillaume Desoubeaux, Ahmed H Fahal, Clovis Tauber","doi":"10.1093/trstmh/trad057","DOIUrl":"10.1093/trstmh/trad057","url":null,"abstract":"<p><strong>Background: </strong>The therapeutic strategy for mycetoma relies heavily on the identification of the causative agents, which are either fungal or bacterial. While histopathological examination of surgical biopsies is currently the most used diagnostic tool, it requires well-trained pathologists, who are lacking in most rural areas where mycetoma is endemic. In this work we propose and evaluate a machine learning approach that semi-automatically analyses histopathological microscopic images of grains and provides a classification of the disease as eumycetoma or actinomycetoma.</p><p><strong>Methods: </strong>The computational model is based on radiomics and partial least squares. It is assessed on a dataset that includes 890 individual grains collected from 168 patients originating from the Mycetoma Research Centre in Sudan. The dataset contained 94 eumycetoma cases and 74 actinomycetoma cases, with a distribution of the species among the two causative agents that is representative of the Sudanese distribution.</p><p><strong>Results: </strong>The proposed model achieved identification of causative agents with an accuracy of 91.89%, which is comparable to the accuracy of experts from the domain. The method was found to be robust to a small error in the segmentation of the grain and to changes in the acquisition protocol. Among the radiomics features, the homogeneity of mycetoma grain textures was found to be the most discriminative feature for causative agent identification.</p><p><strong>Conclusion: </strong>The results presented in this study support that this computational approach could greatly benefit rural areas with limited access to specialized clinical centres and also provide a second opinion for expert pathologists to implement the appropriate therapeutic strategy.</p>","PeriodicalId":23218,"journal":{"name":"Transactions of The Royal Society of Tropical Medicine and Hygiene","volume":null,"pages":null},"PeriodicalIF":2.2,"publicationDate":"2024-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138807184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Toxoplasma gondii infection and ABO blood groups: a systematic review and meta-analysis. 弓形虫感染与 ABO 血型:系统回顾与荟萃分析。
IF 1.9 4区 医学 Q3 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH Pub Date : 2024-04-06 DOI: 10.1093/trstmh/trad085
Tooran Nayeri, Mahmood Moosazadeh, Abdolhossein Dalimi Asl, Fatemeh Ghaffarifar, Shahabeddin Sarvi, Ahmad Daryani

The current study aimed to determine the prevalence of Toxoplasma gondii in ABO blood groups and assess the relationship between the prevalence of T. gondii and blood groups. A literature search was carried out for epidemiological studies that were published through December 2022. A random effects model was used to determine the OR and the pooled prevalence with a 95% CI. The estimated pooled prevalences of T. gondii infection in the A, B, AB and O blood groups were 38% (95% CI 27 to 48%), 38% (95% CI 29 to 47%), 36% (95% CI 26 to 45%) and 36% (95% CI 27 to 45%), respectively. Also, the pooled ORs of the relationship between the prevalence of T. gondii infection and the A, B, AB and O blood groups were 1.08 (95% CI 0.97 to 1.19), 1.10 (95% CI 0.95 to 1.28), 1.08 (95% CI 0.92 to 1.27) and 0.89 (95% CI 0.80 to 1.00), respectively. This meta-analysis did not show any relationship between the prevalence of T. gondii infection and ABO blood groups.

本研究旨在确定弓形虫在 ABO 血型中的流行率,并评估弓形虫流行率与血型之间的关系。研究人员对截至 2022 年 12 月发表的流行病学研究进行了文献检索。采用随机效应模型确定了OR值和包含95% CI的集合流行率。估计A、B、AB和O血型的淋病双球菌感染率分别为38%(95% CI 27%至48%)、38%(95% CI 29%至47%)、36%(95% CI 26%至45%)和36%(95% CI 27%至45%)。此外,淋病双球菌感染率与 A、B、AB 和 O 血型之间的汇总 OR 分别为 1.08(95% CI 0.97 至 1.19)、1.10(95% CI 0.95 至 1.28)、1.08(95% CI 0.92 至 1.27)和 0.89(95% CI 0.80 至 1.00)。这项荟萃分析并未显示淋病双球菌感染率与ABO血型之间存在任何关系。
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引用次数: 0
Predictors of 28-day mortality in melioidosis patients presenting to an emergency department: a retrospective cohort study from South India. 急诊科类鼻疽患者 28 天死亡率的预测因素:印度南部的一项回顾性队列研究。
IF 2.2 4区 医学 Q2 Medicine Pub Date : 2024-03-30 DOI: 10.1093/trstmh/trae017
S Nisarg, Praveen Kumar Tirlangi, Prithvishree Ravindra, Rachana Bhat, Sachin Nayak Sujir, Sai Deepak Alli, Soumi Chowdhury, Venkat Abhiram Earny, Nitin Gupta, Chiranjay Mukhopadhyay

Background: Septic melioidosis is associated with high mortality in resource-limited settings. The current study aims to find 28-d all-cause mortality predictors within 24 h of admission in melioidosis patients presenting to an emergency department.

Methods: This retrospective cohort study (2018-2022) included melioidosis patients divided into two groups based on their primary outcomes (28-d mortality). All the clinically relevant factors significant in univariate analysis were selected for binary logistic regression analysis. Those factors significant in logistic regression analysis were considered independent predictors of mortality.

Results: Of the 53 patients with melioidosis, the 28-d mortality of melioidosis patients admitted to the emergency department was 51% (n=27). Respiratory involvement, renal dysfunction, haemodynamic instability, elevated aspartate transaminase, elevated activated partial thromboplastin time, elevated CRP, elevated procalcitonin, decreased albumin, decreased absolute neutrophil count, decreased absolute lymphocyte count and use of piperacillin-tazobactam or azithromycin were significant predictors of mortality on univariate analysis. Vasopressor requirement (p=0.03) and low serum albumin level (0.041) at presentation were independent predictors of mortality.

Conclusion: Vasopressor requirement and low albumin levels at presentation in the emergency department are independent predictors of mortality. There is a need to create awareness among primary care physicians to enable early diagnosis and prompt initiation of treatment.

背景:在资源有限的环境中,化脓性类鼻疽与高死亡率有关。本研究旨在寻找急诊科髓鞘炎患者入院 24 小时内 28 天全因死亡率的预测因素:这项回顾性队列研究(2018-2022 年)根据主要结果(28 天死亡率)将类鼻疽患者分为两组。所有在单变量分析中显著的临床相关因素都被选中进行二元逻辑回归分析。在逻辑回归分析中显著的因素被认为是死亡率的独立预测因素:结果:在 53 名类鼻疽患者中,急诊科收治的类鼻疽患者 28 天内的死亡率为 51%(n=27)。在单变量分析中,呼吸系统受累、肾功能不全、血流动力学不稳定、天冬氨酸转氨酶升高、活化部分凝血活酶时间升高、CRP升高、降钙素原升高、白蛋白降低、中性粒细胞绝对计数降低、淋巴细胞绝对计数降低以及使用哌拉西林-他唑巴坦或阿奇霉素是预测死亡率的重要因素。需要使用血管加压器(p=0.03)和发病时血清白蛋白水平低(0.041)是预测死亡率的独立因素:结论:在急诊科就诊时需要使用血管加压器和白蛋白水平低是预测死亡率的独立因素。有必要提高初级保健医生的认识,以实现早期诊断和及时治疗。
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引用次数: 0
Towards enhanced control of mycetoma: a roadmap to achieve the UN's sustainable development goals by 2030. 加强对霉菌瘤的控制:到 2030 年实现联合国可持续发展目标的路线图。
IF 2.2 4区 医学 Q2 Medicine Pub Date : 2024-03-26 DOI: 10.1093/trstmh/trae016
Ahmed Fahal, Dallas J Smith, Borna Nyaoke, Kingsley Asiedu, Fabiana Falves, Supriya Warusavithanas, Daniel Argaw, Roderick Hay

Mycetoma is a neglected tropical disease (NTD) with devastating morbidity and stigma. Despite increased awareness and international collaboration, the burden of mycetoma is largely unknown and diagnosis and treatment are difficult. Addressing mycetoma globally aligns with several United Nation's Sustainable Development Goals (SDGs). Little progress has been made since the WHO's NTD roadmap publication in 2020. The Global Mycetoma Working Group proposes an enhanced mycetoma-control roadmap to meet the SDGs, stimulate progress and improve the lives of patients experiencing mycetoma. By aligning mycetoma management with the goals and targets of this enhanced roadmap, it becomes possible to leverage existing resources, infrastructure and partnerships to improve the lives of affected individuals and communities. This updated assessment is designed for the benefit of health workers and providers in mycetoma-endemic areas, NTD government officials, civil society and funding and implementing agencies.

霉形体瘤是一种被忽视的热带疾病(NTD),发病率极高,并给人们带来耻辱。尽管人们对霉菌性瘤的认识有所提高,国际合作也在不断加强,但霉菌性瘤造成的负担在很大程度上仍不为人所知,诊断和治疗也十分困难。在全球范围内防治霉菌性阴道炎符合联合国的几项可持续发展目标(SDGs)。自 2020 年世卫组织发布非传染性疾病(NTD)路线图以来,进展甚微。全球霉菌瘤工作组提出了一个强化的霉菌瘤控制路线图,以实现可持续发展目标、推动进展并改善霉菌瘤患者的生活。通过将霉菌瘤管理与这一强化路线图的目标和指标相结合,就有可能利用现有资源、基础设施和合作伙伴关系来改善受影响个人和社区的生活。本最新评估报告旨在为霉菌瘤流行地区的卫生工作者和医疗服务提供者、非传染性疾病政府官员、民间团体以及资助和执行机构提供帮助。
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引用次数: 0
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Transactions of The Royal Society of Tropical Medicine and Hygiene
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