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Quantifying the Corneal Nerve Whorl Pattern. 量化角膜神经轮型。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.11
Maryse Lapierre-Landry, Eric Y Lu, Matthew T McPheeters, Made Airanthi K Widjaja-Adhi, David L Wilson, Rony R Sayegh, Patricia R Taylor, Marcin Golczak, Michael W Jenkins

Purpose: The corneal nerves within the sub-basal nerve plexus (SBNP) display a distinctive whorl-like pattern, a highly dynamic structure that could be a marker of diseases. Previous studies have reported a decrease in whorl nerve density in patients with diabetes, indicating an avenue for noninvasive monitoring of diabetic neuropathy. However, conflicting results have since been reported, highlighting the need for improved quantitative analysis of the corneal whorl. We present an automated algorithm to characterize the whorl shape and test the hypothesis that the whorl organization is affected by diabetic neuropathy.

Methods: The SBNP whorl was analyzed as a vector field, from which seven whorl metrics were calculated. The efficacy of these whorl metrics was demonstrated in synthetic images, ex vivo mouse corneas, and in a publicly available dataset of wide-field in vivo confocal microscopy (IVCM) images of diabetic and control subjects. Linear discriminant analysis and the Peacock test were used to test for statistical differences. Our analysis code is made freely available.

Results: Using our whorl metrics, we were able to quantify different whorl patterns in our patient population and statistically compare cohorts. We determined that whorl patterns tend to present bilaterally in patients (P < 0.001), but there were no significant differences between whorl patterns in patients with diabetes and control subjects, nor between patients with or without neuropathy symptoms.

Conclusions: We present a generalizable framework to statistically compare corneal nerve patterns in cohorts of patients.

Translational relevance: SBNP whorl patterns could serve as a noninvasive marker for ocular diseases, whereas few quantitative IVCM endpoints have been identified to date.

目的:基底下神经丛(SBNP)内的角膜神经显示出一种独特的螺旋状结构,这种高度动态的结构可能是疾病的标志。先前的研究报道了糖尿病患者的全神经密度下降,这为糖尿病神经病变的无创监测提供了一条途径。然而,矛盾的结果已经报道,强调需要改进的定量分析角膜轮。我们提出了一种自动算法来表征螺旋形状和测试假设,即螺旋组织受到糖尿病神经病变的影响。方法:将SBNP螺旋作为矢量场进行分析,计算7个螺旋指标。在合成图像、离体小鼠角膜以及糖尿病患者和对照组的宽视场体内共聚焦显微镜(IVCM)图像的公开数据集中,证明了这些螺旋指标的有效性。采用线性判别分析和孔雀检验检验统计差异。我们的分析代码是免费提供的。结果:使用我们的螺旋指标,我们能够量化患者群体中不同的螺旋模式,并在统计上比较队列。我们确定患者的螺旋型倾向于双侧出现(P < 0.001),但糖尿病患者和对照组的螺旋型之间没有显著差异,有或没有神经病变症状的患者之间也没有显著差异。结论:我们提出了一个可推广的框架来统计比较患者队列中的角膜神经模式。翻译相关性:SBNP螺旋模式可以作为眼部疾病的非侵入性标志物,而迄今为止很少有定量的IVCM终点被确定。
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引用次数: 0
Archetypal Analysis Reveals Consistent Visual Field Patterns for Stimulus Sizes III and V in Glaucoma and NAION. 原型分析揭示了青光眼和NAION患者刺激尺寸III和V的视野模式一致。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.15
David Szanto, Michael Wall, Luke X Chong, Brian Woods, Tobias Elze, Jui-Kai Wang, Mona Garvin, Randy Kardon, Mark J Kupersmith

Purpose: Disorders of the anterior optic nerve cause quantifiable patterns, or archetypes (AT), in visual fields (VFs) obtained using standardized automated perimetry using stimulus size III (size III). VFs with stimulus size V (size V) can reduce retest variability in eyes with moderate to severe loss. We postulated that VF testing using both stimuli would show similar ATs in eyes with glaucoma and nonarteritic anterior ischemic optic neuropathy (NAION).

Methods: We used 1969 same-day pairs of 24-2 size III and size V VFs from two datasets. QRK207 is the largest NAION study to date, and the VIPII study measured same-day VFs across many stimulus sizes. We censored raw sensitivities of less than 21 dB for size III and 24 dB for size V and age-standardized to total deviations, before archetypal analysis (AA). We compared the ATs between the two stimuli and the combined data.

Results: Using 14 ATs for both glaucoma and NAION, AA captured similar patterns between the two stimuli in both diseases with 87% of AT pairings having a cosine similarity of 0.8 or greater. The combined ATs retained the patterns in the separate stimuli VFs.

Conclusions: AA shows that size V VFs provide quantifiable patterns of loss similar to size III. This aids in comparing stimulus sizes for monitoring VF patterns in disease progression.

Translational relevance: AA shows similar quantifiable patterns of VF loss with size III or size V, supporting the use of size V to monitor eyes with moderate to severe VF loss.

目的:前视神经障碍导致使用刺激尺寸III (size III)的标准化自动视野测量获得的视野(VFs)中的可量化模式或原型(AT)。刺激尺寸V (size V)的VFs可以减少中度至重度眼睛的重测变异性。我们假设在青光眼和非动脉性前缺血性视神经病变(NAION)的眼睛中,使用两种刺激的VF测试将显示相似的ATs。方法:我们使用来自两个数据集的1969对24-2尺寸III和尺寸V的VFs。QRK207是迄今为止最大的NAION研究,VIPII研究测量了许多刺激大小的当日VFs。在原型分析(AA)之前,我们审查了尺寸III小于21 dB和尺寸V小于24 dB的原始灵敏度,并对总偏差进行了年龄标准化。我们比较了两种刺激和综合数据之间的ATs。结果:对青光眼和NAION使用14个AT, AA捕获了两种疾病中两种刺激之间的相似模式,87%的AT配对的余弦相似度为0.8或更高。组合的ATs保留了单独刺激VFs的模式。结论:AA显示V级VFs提供了与III级相似的可量化的损失模式。这有助于比较刺激大小,以监测疾病进展中的VF模式。翻译相关性:AA显示与III或V码相似的VF丧失的可量化模式,支持使用V码监测中度至重度VF丧失的眼睛。
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引用次数: 0
The Effect of Terpinen-4-ol on Human Corneal Epithelium. 松油烯-4-醇对人角膜上皮的影响。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.18
Joo-Hee Park, Choul Yong Park

Purpose: To investigate the toxicity of terpinen-4-ol (T4O) on primary cultured human corneal epithelial cells (HCECs).

Methods: HCECs were exposed to various concentrations (0%-0.1%) of T4O for 15 minutes to 72 hours. Cell viability was assessed using the CCK8 kit and cell counting. Intracellular reactive oxygen species (ROS) were measured after 15 to 60 minutes of T4O exposure. Changes in cell morphology and cytoplasmic actin filaments were observed using phase contrast microscopy and immunocytochemistry. The expression levels of proteins involved in cell survival pathways (mTOR, Akt, Bcl-xL, and BAX) were evaluated by Western blot analysis.

Results: T4O induced dose-dependent toxicity in HCECs. Exposure to 0.05% T4O for 15 minutes significantly decreased cell viability. Lower concentrations (0.025% and 0.0125%) also caused significant toxicity with longer exposure times. Prolonged exposure enhanced cytotoxicity, with 0.05% T4O reducing viability by half after 24 hours and 0.1% T4O causing complete cell death. Increased intracellular ROS and decreased levels of phosphorylated mTOR, phosphorylated Akt, and Bcl-xL, along with increased BAX expression, accompanied this toxicity. F-actin staining revealed significant changes in cell adhesion.

Conclusions: Our study demonstrates that T4O exposure causes significant toxicity in HCECs, depending on concentration and incubation time. This toxic response is associated with increased ROS and decreased cell survival pathway activity.

Translational relevance: The corneal epithelial toxicity data of T4O revealed in this study may be useful in the future use of tea tree oil or the development of tee tree oil-containing eyelid scrub products for treating eyelid demodex infestation.

目的:研究松油烯-4-醇(t40o)对原代培养人角膜上皮细胞(HCECs)的毒性。方法:将HCECs暴露于不同浓度(0% ~ 0.1%)的t40o中15分钟~ 72小时。使用CCK8试剂盒和细胞计数评估细胞活力。在t40o暴露15至60分钟后测量细胞内活性氧(ROS)。利用相衬显微镜和免疫细胞化学观察细胞形态和细胞质肌动蛋白丝的变化。Western blot检测细胞存活通路相关蛋白(mTOR、Akt、Bcl-xL、BAX)的表达水平。结果:t40诱导HCECs的剂量依赖性毒性。暴露于0.05% t40o 15分钟显著降低细胞活力。较低浓度(0.025%和0.0125%)暴露时间越长,毒性也越大。长时间暴露在t40o中会增强细胞毒性,0.05%的t40o在24小时后使细胞活力降低一半,0.1%的t40o会导致细胞完全死亡。细胞内ROS增加,磷酸化mTOR、磷酸化Akt和Bcl-xL水平降低,BAX表达增加,伴随着这种毒性。F-actin染色显示细胞粘附明显改变。结论:我们的研究表明,t40暴露会对HCECs产生显著的毒性,这取决于浓度和孵育时间。这种毒性反应与ROS增加和细胞存活途径活性降低有关。翻译相关性:本研究揭示的t40o角膜上皮毒性数据可能对未来使用茶树油或开发含茶树油的眼睑磨砂产品治疗眼睑蠕形螨感染有用。
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引用次数: 0
Is This Inflammation, Conjunctiva-Associated Lymphoid Tissue, or Tertiary Lymphoid Structures in These Rabbits? 这些兔子是炎症、结膜相关淋巴组织还是三级淋巴组织?
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.3
JoAnn C L Schuh
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引用次数: 0
Band Visibility in High-Resolution Optical Coherence Tomography Assessed With a Custom Review Tool and Updated, Histology-Derived Nomenclature. 高分辨率光学相干断层扫描的波段可见性评估与自定义审查工具和更新,组织学衍生的命名法。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.19
Lukas Goerdt, Thomas A Swain, Deepayan Kar, Gerald McGwin, Andreas Berlin, Mark E Clark, Cynthia Owsley, Kenneth R Sloan, Christine A Curcio

Purpose: For structure-function research at the transition of aging to age-related macular degeneration, we refined the current consensus optical coherence tomography (OCT) nomenclature and evaluated a novel review software for investigational high-resolution OCT imaging (HR-OCT; <3 µm axial resolution).

Method: Volume electron microscopy, immunolocalizations, histology, and investigational devices informed a refined OCT nomenclature for a custom ImageJ-based review tool to assess retinal band visibility. We examined effects on retinal band visibility of automated real-time averaging (ART) 9 and 100 (11 eyes of 10 healthy young adults), aging (10 young vs 22 healthy aged), and age-related macular degeneration (AMD; 22 healthy aged, 17 early (e)AMD, 15 intermediate (i)AMD). Intrareader reliability was assessed.

Results: Bands not included in consensus nomenclature are now visible using HR-OCT: inner plexiform layer (IPL) 1-5, outer plexiform layer (OPL) 1-2, outer segment interdigitation zone 1-2 (OSIZ, including hyporeflective outer segments), and retinal pigment epithelium (RPE) 1-5. Cohen's kappa was 0.54-0.88 for inner and 0.67-0.83 for outer retinal bands in a subset of 10 eyes. IPL-3-5 and OPL-2 visibility benefitted from increased ART. OSIZ-2 and RPE-1,2,3,5 visibility was worse in aged eyes than in young eyes. OSIZ-1-2, RPE-1, and RPE-5 visibility decreased in eAMD and iAMD compared to healthy aged eyes.

Conclusions: We reliably identified 28 retinal bands using a novel review tool for HR-OCT. Image averaging improved inner retinal band visibility. Aging and AMD development impacted outer retinal band visibility.

Translational significance: Detailed knowledge of anatomic structures visible on OCT will enhance precision in research, including AI training and structure-function analyses.

目的:为了对老龄化向老年性黄斑变性过渡阶段的结构-功能进行研究,我们改进了目前一致认可的光学相干断层扫描(OCT)术语,并评估了一种新型审查软件,用于研究性高分辨率 OCT 成像(HR-OCT;方法:通过电子显微镜、免疫定位、组织学和研究性设备,为基于 ImageJ 的定制审查工具评估视网膜带能见度提供了改进的 OCT 术语:体积电子显微镜、免疫定位、组织学和研究设备为基于 ImageJ 的定制审查工具提供了改进的 OCT 术语,以评估视网膜带能见度。我们研究了自动实时平均(ART)9 和 100(10 位健康年轻人的 11 只眼睛)、老龄化(10 位年轻人与 22 位健康老年人)和年龄相关性黄斑变性(AMD;22 位健康老年人、17 位早期(e)AMD、15 位中期(i)AMD)对视网膜带能见度的影响。对读数器内部的可靠性进行了评估:使用 HR-OCT 现在可以看到共识命名法中未包括的波段:内层丛状层 (IPL) 1-5、外层丛状层 (OPL) 1-2、外节段交错区 1-2(OSIZ,包括低反射外节段)和视网膜色素上皮 (RPE) 1-5。在 10 只眼睛的子集中,视网膜内层带的 Cohen's kappa 为 0.54-0.88,视网膜外层带的 Cohen's kappa 为 0.67-0.83。IPL-3-5 和 OPL-2 的能见度得益于 ART 的增加。老年眼的 OSIZ-2 和 RPE-1,2,3,5 能见度比年轻眼差。与健康的老年眼相比,eAMD 和 iAMD 患者的 OSIZ-1-2、RPE-1 和 RPE-5 可见度降低:我们使用 HR-OCT 的新型审查工具可靠地识别了 28 个视网膜带。图像平均化提高了内层视网膜带的可见度。老化和 AMD 的发展影响了外层视网膜带的可见度:详细了解 OCT 上可见的解剖结构将提高研究的精确度,包括人工智能训练和结构功能分析。
{"title":"Band Visibility in High-Resolution Optical Coherence Tomography Assessed With a Custom Review Tool and Updated, Histology-Derived Nomenclature.","authors":"Lukas Goerdt, Thomas A Swain, Deepayan Kar, Gerald McGwin, Andreas Berlin, Mark E Clark, Cynthia Owsley, Kenneth R Sloan, Christine A Curcio","doi":"10.1167/tvst.13.12.19","DOIUrl":"10.1167/tvst.13.12.19","url":null,"abstract":"<p><strong>Purpose: </strong>For structure-function research at the transition of aging to age-related macular degeneration, we refined the current consensus optical coherence tomography (OCT) nomenclature and evaluated a novel review software for investigational high-resolution OCT imaging (HR-OCT; <3 µm axial resolution).</p><p><strong>Method: </strong>Volume electron microscopy, immunolocalizations, histology, and investigational devices informed a refined OCT nomenclature for a custom ImageJ-based review tool to assess retinal band visibility. We examined effects on retinal band visibility of automated real-time averaging (ART) 9 and 100 (11 eyes of 10 healthy young adults), aging (10 young vs 22 healthy aged), and age-related macular degeneration (AMD; 22 healthy aged, 17 early (e)AMD, 15 intermediate (i)AMD). Intrareader reliability was assessed.</p><p><strong>Results: </strong>Bands not included in consensus nomenclature are now visible using HR-OCT: inner plexiform layer (IPL) 1-5, outer plexiform layer (OPL) 1-2, outer segment interdigitation zone 1-2 (OSIZ, including hyporeflective outer segments), and retinal pigment epithelium (RPE) 1-5. Cohen's kappa was 0.54-0.88 for inner and 0.67-0.83 for outer retinal bands in a subset of 10 eyes. IPL-3-5 and OPL-2 visibility benefitted from increased ART. OSIZ-2 and RPE-1,2,3,5 visibility was worse in aged eyes than in young eyes. OSIZ-1-2, RPE-1, and RPE-5 visibility decreased in eAMD and iAMD compared to healthy aged eyes.</p><p><strong>Conclusions: </strong>We reliably identified 28 retinal bands using a novel review tool for HR-OCT. Image averaging improved inner retinal band visibility. Aging and AMD development impacted outer retinal band visibility.</p><p><strong>Translational significance: </strong>Detailed knowledge of anatomic structures visible on OCT will enhance precision in research, including AI training and structure-function analyses.</p>","PeriodicalId":23322,"journal":{"name":"Translational Vision Science & Technology","volume":"13 12","pages":"19"},"PeriodicalIF":2.6,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11645748/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142819119","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Disruption of the Enterococcus faecalis-Induced Biofilm on the Intraocular Lens Using Bacteriophages. 利用噬菌体破坏粪肠球菌诱导的人工晶状体生物膜。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.25
Tatsuma Kishimoto, Ken Fukuda, Waka Ishida, Aozora Kuwana, Daisuke Todokoro, Jumpei Uchiyama, Shigenobu Matsuzaki, Kenji Yamashiro

Purpose: To compare the effects of bacteriophages (phages) and vancomycin on Enterococcus faecalis-induced biofilms on the intraocular lens.

Methods: E. faecalis strains EF24, GU02, GU03, and phiEF14H1 were used. The expression of the enterococcus surface protein (esp) gene was analyzed using polymerase chain reaction. Phages or vancomycin was added to the biofilms formed on culture plates or acrylic intraocular lenses. The biofilms were quantified after staining with crystal violet. The structure of the biofilms was analyzed using scanning electron microscopy.

Results: E. faecalis strains EF24, GU02, and GU03 formed biofilms on cell culture plates; however, the esp-negative GU03 strain had a significantly lower biofilm-forming ability than the esp-positive strains EF24 and GU02. The addition of phiEF14H1 resulted in a significant reduction in biofilm mass produced by both EF24 and GU02 compared with the untreated control. However, the addition of vancomycin did not degrade the biofilms. Phages significantly degraded biofilms and reduced the viable EF24 and GU02 bacteria on the intraocular lens.

Conclusions: Phages can degrade biofilms formed on the intraocular lens and destroy the bacteria within it. Thus, phage therapy may be a new treatment option for refractory and recurrent endophthalmitis caused by biofilm-forming bacteria.

Translational relevance: Phage therapy, a novel treatment option for refractory and recurrent endophthalmitis caused by biofilm-forming bacteria, effectively lyses E. faecalis-induced biofilms.

目的:比较噬菌体(噬菌体)和万古霉素对粪肠球菌诱导的人工晶状体生物膜的影响。方法:采用EF24、GU02、GU03和phiEF14H1菌株进行检测。采用聚合酶链反应法分析肠球菌表面蛋白(esp)基因的表达。将噬菌体或万古霉素添加到培养板或丙烯酸人工晶状体上形成的生物膜中。结晶紫染色后对生物膜进行定量。利用扫描电镜对生物膜的结构进行了分析。结果:粪肠杆菌EF24、GU02、GU03在细胞培养板上形成生物膜;而esp阴性菌株GU03的生物膜形成能力显著低于esp阳性菌株EF24和GU02。与未经处理的对照相比,phiEF14H1的添加导致EF24和GU02产生的生物膜量显著减少。然而,万古霉素的加入并没有降解生物膜。噬菌体显著降解生物膜,降低了人工晶状体上EF24和GU02细菌的存活率。结论:噬菌体可以降解人工晶状体上形成的生物膜,并破坏其中的细菌。因此,噬菌体治疗可能是治疗由生物膜形成细菌引起的难治性和复发性眼内炎的一种新的治疗选择。翻译相关性:噬菌体疗法是一种新的治疗方案,用于治疗由形成生物膜的细菌引起的难治性和复发性眼内炎,有效地溶解粪球菌诱导的生物膜。
{"title":"Disruption of the Enterococcus faecalis-Induced Biofilm on the Intraocular Lens Using Bacteriophages.","authors":"Tatsuma Kishimoto, Ken Fukuda, Waka Ishida, Aozora Kuwana, Daisuke Todokoro, Jumpei Uchiyama, Shigenobu Matsuzaki, Kenji Yamashiro","doi":"10.1167/tvst.13.12.25","DOIUrl":"10.1167/tvst.13.12.25","url":null,"abstract":"<p><strong>Purpose: </strong>To compare the effects of bacteriophages (phages) and vancomycin on Enterococcus faecalis-induced biofilms on the intraocular lens.</p><p><strong>Methods: </strong>E. faecalis strains EF24, GU02, GU03, and phiEF14H1 were used. The expression of the enterococcus surface protein (esp) gene was analyzed using polymerase chain reaction. Phages or vancomycin was added to the biofilms formed on culture plates or acrylic intraocular lenses. The biofilms were quantified after staining with crystal violet. The structure of the biofilms was analyzed using scanning electron microscopy.</p><p><strong>Results: </strong>E. faecalis strains EF24, GU02, and GU03 formed biofilms on cell culture plates; however, the esp-negative GU03 strain had a significantly lower biofilm-forming ability than the esp-positive strains EF24 and GU02. The addition of phiEF14H1 resulted in a significant reduction in biofilm mass produced by both EF24 and GU02 compared with the untreated control. However, the addition of vancomycin did not degrade the biofilms. Phages significantly degraded biofilms and reduced the viable EF24 and GU02 bacteria on the intraocular lens.</p><p><strong>Conclusions: </strong>Phages can degrade biofilms formed on the intraocular lens and destroy the bacteria within it. Thus, phage therapy may be a new treatment option for refractory and recurrent endophthalmitis caused by biofilm-forming bacteria.</p><p><strong>Translational relevance: </strong>Phage therapy, a novel treatment option for refractory and recurrent endophthalmitis caused by biofilm-forming bacteria, effectively lyses E. faecalis-induced biofilms.</p>","PeriodicalId":23322,"journal":{"name":"Translational Vision Science & Technology","volume":"13 12","pages":"25"},"PeriodicalIF":2.6,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11654774/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142829909","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
CNN-Based Device-Agnostic Feature Extraction From ONH OCT Scans. 基于cnn的ONH OCT扫描设备不可知特征提取。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.5
Sjoerd J Driessen, Karin A van Garderen, Danilo Andrade De Jesus, Luisa Sanchez Brea, João Barbosa-Breda, Bart Liefers, Hans G Lemij, Doreen Nelson-Ayifah, Angelina Ampong, Pieter W M Bonnemaijer, Alberta A H J Thiadens, Caroline C W Klaver

Purpose: Optical coherence tomography (OCT)-derived measurements of the optic nerve head (ONH) from different devices are not interchangeable. This poses challenges to patient follow-up and collaborative studies. Here, we present a device-agnostic method for the extraction of OCT biomarkers using artificial intelligence.

Methods: ONH-centered OCT volumes from the Heidelberg SPECTRALIS, ZEISS CIRRUS HD-OCT 5000, and Topcon 3D OCT-1000 Mark I/II and 3D OCT-2000 devices were annotated by trained graders. A convolutional neural network (CNN) was trained on these segmented B-scans and utilized to obtain several ONH biomarkers, such as the retinal nerve fiber layer (RNFL) and the minimal rim width (MRW). The CNN results were compared between different devices and to the manufacturer-reported values using an independent test set.

Results: The intraclass correlation coefficient (ICC) for the circumpapillary retinal nerve fiber layer (cpRNFL) at 3.4 mm reported by the CIRRUS and 3D OCT-2000 was 0.590 (95% confidence interval [CI], -0.079 to 0.901), and our CNN resulted in a cpRNFL ICC of 0.667 (95% CI, -0.035 to 0.939). The cpRNFL at 3.5 mm on the CIRRUS, 3D OCT-2000, and SPECTRALIS generated by the CNN resulted in an ICC of 0.656 (95% CI, 0.055-0.922). Comparing the global mean MRWs from the SPECTRALIS between CNN and manufacturer yielded an ICC of 0.983 (95% CI, 0.917-0.997). The CNN ICC for the MRW among the CIRRUS, 3D OCT-2000, and SPECTRALIS was 0.917 (95% CI, 0.947-0.981).

Conclusions: Our device-agnostic feature extraction from ONH OCT scans showed a higher reliability than the measures generated by the manufacturers for cpRNFL. MRW measurements compared very well among the manufacturers.

Translational relevance: This open-source software can robustly extract a wide range of biomarkers from any OCT device, removing the dependency on manufacturer-specific algorithms, which has significant implications for patient follow-up and collaborative research.

目的:光学相干断层扫描(OCT)衍生的测量视神经头(ONH)从不同的设备是不可互换的。这对患者随访和合作研究提出了挑战。在这里,我们提出了一种使用人工智能提取OCT生物标志物的设备无关方法。方法:由训练有素的评分员对Heidelberg SPECTRALIS、ZEISS CIRRUS HD-OCT 5000和Topcon 3D OCT-1000 Mark I/II和3D OCT-2000设备的onh中心OCT卷进行注释。卷积神经网络(CNN)在这些分段b扫描上进行训练,并利用卷积神经网络(CNN)获得几个ONH生物标志物,如视网膜神经纤维层(RNFL)和最小边缘宽度(MRW)。CNN的结果在不同设备之间进行比较,并使用独立的测试集与制造商报告的值进行比较。结果:CIRRUS和3D OCT-2000报道的3.4 mm视网膜乳头状周围神经纤维层(cpRNFL)的类内相关系数(ICC)为0.590(95%可信区间[CI], -0.079 ~ 0.901),我们的CNN得出的cpRNFL ICC为0.667 (95% CI, -0.035 ~ 0.939)。CNN生成的CIRRUS、3D OCT-2000和SPECTRALIS上3.5 mm的cpRNFL的ICC为0.656 (95% CI, 0.055-0.922)。比较CNN和制造商之间SPECTRALIS的全球平均mrw, ICC为0.983 (95% CI, 0.917-0.997)。CIRRUS、3D OCT-2000和SPECTRALIS的MRW的CNN ICC为0.917 (95% CI, 0.947-0.981)。结论:我们从ONH OCT扫描中提取的与设备无关的特征显示出比制造商为cpRNFL生成的措施更高的可靠性。MRW测量值在制造商之间比较非常好。翻译相关性:这个开源软件可以从任何OCT设备中健壮地提取广泛的生物标志物,消除对制造商特定算法的依赖,这对患者随访和合作研究具有重要意义。
{"title":"CNN-Based Device-Agnostic Feature Extraction From ONH OCT Scans.","authors":"Sjoerd J Driessen, Karin A van Garderen, Danilo Andrade De Jesus, Luisa Sanchez Brea, João Barbosa-Breda, Bart Liefers, Hans G Lemij, Doreen Nelson-Ayifah, Angelina Ampong, Pieter W M Bonnemaijer, Alberta A H J Thiadens, Caroline C W Klaver","doi":"10.1167/tvst.13.12.5","DOIUrl":"10.1167/tvst.13.12.5","url":null,"abstract":"<p><strong>Purpose: </strong>Optical coherence tomography (OCT)-derived measurements of the optic nerve head (ONH) from different devices are not interchangeable. This poses challenges to patient follow-up and collaborative studies. Here, we present a device-agnostic method for the extraction of OCT biomarkers using artificial intelligence.</p><p><strong>Methods: </strong>ONH-centered OCT volumes from the Heidelberg SPECTRALIS, ZEISS CIRRUS HD-OCT 5000, and Topcon 3D OCT-1000 Mark I/II and 3D OCT-2000 devices were annotated by trained graders. A convolutional neural network (CNN) was trained on these segmented B-scans and utilized to obtain several ONH biomarkers, such as the retinal nerve fiber layer (RNFL) and the minimal rim width (MRW). The CNN results were compared between different devices and to the manufacturer-reported values using an independent test set.</p><p><strong>Results: </strong>The intraclass correlation coefficient (ICC) for the circumpapillary retinal nerve fiber layer (cpRNFL) at 3.4 mm reported by the CIRRUS and 3D OCT-2000 was 0.590 (95% confidence interval [CI], -0.079 to 0.901), and our CNN resulted in a cpRNFL ICC of 0.667 (95% CI, -0.035 to 0.939). The cpRNFL at 3.5 mm on the CIRRUS, 3D OCT-2000, and SPECTRALIS generated by the CNN resulted in an ICC of 0.656 (95% CI, 0.055-0.922). Comparing the global mean MRWs from the SPECTRALIS between CNN and manufacturer yielded an ICC of 0.983 (95% CI, 0.917-0.997). The CNN ICC for the MRW among the CIRRUS, 3D OCT-2000, and SPECTRALIS was 0.917 (95% CI, 0.947-0.981).</p><p><strong>Conclusions: </strong>Our device-agnostic feature extraction from ONH OCT scans showed a higher reliability than the measures generated by the manufacturers for cpRNFL. MRW measurements compared very well among the manufacturers.</p><p><strong>Translational relevance: </strong>This open-source software can robustly extract a wide range of biomarkers from any OCT device, removing the dependency on manufacturer-specific algorithms, which has significant implications for patient follow-up and collaborative research.</p>","PeriodicalId":23322,"journal":{"name":"Translational Vision Science & Technology","volume":"13 12","pages":"5"},"PeriodicalIF":2.6,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11620008/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142772607","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Objective Visual Acuity Estimates in Amblyopia Are More Accurate With Optotype-Based P300 Than With VEP Measurements. 目的:基于视型的P300测量方法比VEP测量方法更准确地估计弱视的视敏度。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.30
Akshara V Gopiswaminathan, Julia Haldina, Khaldoon O Al-Nosairy, Céline Z Duval, Francie H Stolle, Michael B Hoffmann, Sven P Heinrich

Purpose: Traditional visual acuity (VA) measurements depend on subjective responses, which can be unreliable, especially with uncooperative participants. Objective measurements with visual evoked potentials (VEP) address this issue but can overestimate VA in amblyopia. This study aims to establish the P300 component of the event-related potential as an objective VA test for amblyopia and compare its performance to subjective (psychophysical) and VEP-based VA estimates.

Methods: Psychophysical, VEP-based, and P300-based VA estimates were obtained for amblyopic and fellow eyes of 18 participants (aged 19-65) in a bicentric study. VEP-based VA was determined from the spatial frequency threshold derived from occipital cortex pattern-pulse responses to check-sizes ranging from 0.048° to 8.95°. P300 responses were collected using visual oddball sequences with circular optotypes. The threshold was estimated from the sigmoid function of parietal P300 amplitude versus optotype gap size. Mean VA values for amblyopic eyes were compared across methods.

Results: VEP-based VA of the amblyopic eyes overestimated psychophysical VA by 0.18 ± 0.06 logMAR (P = 0.0016). In contrast, P300-based VA showed no significant difference from psychophysical VA (0.00 ± 0.04 logMAR, P > 0.05).

Conclusions: In amblyopia, P300-based optotype VA aligns more closely with psychophysical VA than VEP-based VA, suggesting that P300-based VA is a valid objective alternative for estimating VA in amblyopic eyes.

Translational relevance: This study highlights the potential of P300-based VA testing as a reliable and objective method for assessing VA in amblyopic eyes, offering a promising tool for clinical and research applications where traditional methods fall short.

目的:传统的视力(VA)测量依赖于主观反应,这可能不可靠,尤其是对于不合作的参与者。使用视觉诱发电位(VEP)进行客观测量可以解决这一问题,但可能会高估弱视患者的视力。本研究旨在将事件相关电位的 P300 分量确定为弱视的客观 VA 测试,并将其性能与主观(心理物理)和基于 VEP 的 VA 估值进行比较:方法: 在一项双中心研究中,对 18 名参与者(19-65 岁)的弱视眼和同视眼进行了心理物理、基于 VEP 和基于 P300 的视力评估。基于 VEP 的 VA 是根据枕叶皮层对 0.048° 至 8.95° 的检查大小的模式脉冲响应得出的空间频率阈值确定的。P300 反应是通过带有圆形光型的视觉奇数序列收集的。阈值是根据顶叶 P300 振幅与光型间隙大小的 sigmoid 函数估算得出的。对不同方法下弱视眼的平均视力值进行了比较:结果:基于 VEP 的弱视眼 VA 高估了心理物理 VA 0.18 ± 0.06 logMAR(P = 0.0016)。相比之下,基于 P300 的 VA 与心理物理 VA 没有明显差异(0.00 ± 0.04 logMAR,P > 0.05):结论:在弱视患者中,与基于 VEP 的视力增值相比,基于 P300 的视力增值与心理物理视力增值更为接近,这表明基于 P300 的视力增值是估算弱视眼视力增值的有效客观替代方法:本研究强调了基于 P300 的视力增值测试作为评估弱视眼视力增值的一种可靠而客观的方法的潜力,为传统方法无法满足的临床和研究应用提供了一种前景广阔的工具。
{"title":"Objective Visual Acuity Estimates in Amblyopia Are More Accurate With Optotype-Based P300 Than With VEP Measurements.","authors":"Akshara V Gopiswaminathan, Julia Haldina, Khaldoon O Al-Nosairy, Céline Z Duval, Francie H Stolle, Michael B Hoffmann, Sven P Heinrich","doi":"10.1167/tvst.13.12.30","DOIUrl":"10.1167/tvst.13.12.30","url":null,"abstract":"<p><strong>Purpose: </strong>Traditional visual acuity (VA) measurements depend on subjective responses, which can be unreliable, especially with uncooperative participants. Objective measurements with visual evoked potentials (VEP) address this issue but can overestimate VA in amblyopia. This study aims to establish the P300 component of the event-related potential as an objective VA test for amblyopia and compare its performance to subjective (psychophysical) and VEP-based VA estimates.</p><p><strong>Methods: </strong>Psychophysical, VEP-based, and P300-based VA estimates were obtained for amblyopic and fellow eyes of 18 participants (aged 19-65) in a bicentric study. VEP-based VA was determined from the spatial frequency threshold derived from occipital cortex pattern-pulse responses to check-sizes ranging from 0.048° to 8.95°. P300 responses were collected using visual oddball sequences with circular optotypes. The threshold was estimated from the sigmoid function of parietal P300 amplitude versus optotype gap size. Mean VA values for amblyopic eyes were compared across methods.</p><p><strong>Results: </strong>VEP-based VA of the amblyopic eyes overestimated psychophysical VA by 0.18 ± 0.06 logMAR (P = 0.0016). In contrast, P300-based VA showed no significant difference from psychophysical VA (0.00 ± 0.04 logMAR, P > 0.05).</p><p><strong>Conclusions: </strong>In amblyopia, P300-based optotype VA aligns more closely with psychophysical VA than VEP-based VA, suggesting that P300-based VA is a valid objective alternative for estimating VA in amblyopic eyes.</p><p><strong>Translational relevance: </strong>This study highlights the potential of P300-based VA testing as a reliable and objective method for assessing VA in amblyopic eyes, offering a promising tool for clinical and research applications where traditional methods fall short.</p>","PeriodicalId":23322,"journal":{"name":"Translational Vision Science & Technology","volume":"13 12","pages":"30"},"PeriodicalIF":2.6,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11654770/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142839623","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Corneal Confocal Microscopy Identifies and Differentiates Patients With Multiple Sclerosis and Epilepsy. 角膜共聚焦显微镜识别和区分多发性硬化症和癫痫患者。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.22
Ioannis N Petropoulos, Kareem Essam Aly, Shaikha Al-Thani, Georgios Ponirakis, Hoda Gad, Adnan Khan, Beatriz Canibano, Dirk Deleu, Naveed Akhtar, Gayane Melikyan, Boulenouar Mesraoua, Maria Siddiqi, Jon Perkins, Novsheen Mir, Reny Francis, Abdul Salam, Ahmed El-Sotouhy, Surjith Vattoth, Ahmed Own, Saadat Kamran, Rayaz A Malik

Purpose: To assess whether corneal nerve analysis can identify and differentiate patients with multiple sclerosis (MS) from those with epilepsy.

Methods: Participants with MS (n = 83), participants with epilepsy (n = 50), and healthy controls (HCs) (n = 20) underwent corneal confocal microscopy (CCM) and quantification of automated corneal nerve fiber length (ACNFL), automated corneal nerve fractal dimension (ACNFrD), and ACNFrD/ACNFL ratio of the subbasal nerve plexus.

Results: ACNFL (MS: P < 0.0001; epilepsy: P = 0.002) and ACNFrD (MS: P < 0.0001; epilepsy: P = 0.025) were significantly lower and the ACNFrD/ACNFL ratio (MS: P < 0.0001; epilepsy: P = 0.018) was significantly higher compared to HCs. ACNFL (P = 0.001), ACNFrD (P = 0.0003), and ACNFrD/ACNFL ratio (P = 0.006) were significantly lower in patients with MS compared to those with epilepsy. ACNFL had the highest diagnostic utility for identifying patients with MS (sensitivity/specificity 0.86/0.85, area under the curve [AUC] 0.90, P < 0.0001), and ACNFrD had the highest diagnostic utility for identifying patients with epilepsy (sensitivity/specificity 0.78/0.75, AUC 0.76, P = 0.0008). ACNFrD had the highest diagnostic utility for differentiating patients with MS from epilepsy (sensitivity/specificity 0.66/0.65, AUC 0.70, <0.0001).

Conclusions: Corneal neurodegeneration occurs in and is characterized by a distinct pattern that differentiates patients with MS and epilepsy.

Translational relevance: CCM identifies and differentiates patients with MS and epilepsy, albeit with moderate performance. Further validation, with a larger sample size, is needed.

目的:评估角膜神经分析是否可以识别和区分多发性硬化症(MS)患者和癫痫患者。方法:MS患者(83例)、癫痫患者(50例)和健康对照(20例)接受角膜共聚焦显微镜(CCM)检查,定量测定角膜神经纤维自动长度(ACNFL)、角膜神经自动分形维数(ACNFrD)和基底下神经丛ACNFrD/ACNFL比值。结果:ACNFL (MS: P < 0.0001;癫痫:P = 0.002)和ACNFrD (MS: P < 0.0001;癫痫:P = 0.025)显著降低,ACNFrD/ACNFL比值(MS: P < 0.0001;癫痫:P = 0.018)显著高于hcc。MS患者的ACNFL (P = 0.001)、ACNFrD (P = 0.0003)、ACNFrD/ACNFL比值(P = 0.006)显著低于癫痫患者。ACNFL在识别多发性硬化症患者方面具有最高的诊断效用(敏感性/特异性0.86/0.85,曲线下面积[AUC] 0.90, P < 0.0001), ACNFrD在识别癫痫患者方面具有最高的诊断效用(敏感性/特异性0.78/0.75,AUC 0.76, P = 0.0008)。ACNFrD在鉴别多发性硬化症和癫痫患者方面具有最高的诊断效用(敏感性/特异性0.66/0.65,AUC 0.70)。结论:角膜神经退行性变发生于多发性硬化症和癫痫患者,并以其独特的模式为特征。转化相关性:CCM识别和区分多发性硬化症和癫痫患者,尽管表现中等。需要更大样本量的进一步验证。
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引用次数: 0
Comparing the Thin Plate Spline and Gaussian Interpolation Methods in Generating Hill of Visions for X-Linked Retinitis Pigmentosa Patients. 薄板样条法与高斯插值法在x连锁色素性视网膜炎患者视觉山生成中的比较。
IF 2.6 3区 医学 Q2 OPHTHALMOLOGY Pub Date : 2024-12-02 DOI: 10.1167/tvst.13.12.26
A Yasin Alibhai, Lucas R De Pretto, Antonio Yaghy, Kwang Min Woo, Naira Raquel Dos Santos Xilau, Haleema Siddiqui, Christopher A Pandiscio, Alex Homer, Darin Curtiss, Nadia K Waheed

Purpose: To compare the efficacy of thin plate spline (TPS) and Gaussian interpolation methods in generating hill of visions (HOVs) for patients with X-linked retinitis pigmentosa (XLRP).

Methods: Visual field data from 78 eyes of 39 patients with XLRP were acquired using the Octopus 900 Pro. TPS, Gaussian, and Universal Kriging interpolation methods were implemented to generate HOVs. The volume of the entire grid (VTot), a 30-degree region (V30), and the volume ratio (VRatio) were calculated. Pearson correlation and Bland-Altman limit of agreement (LOA) analysis were performed to assess the concordance. An undersampled grid was used to assess the accuracy of the interpolation by comparing the interpolated value to the actual measured value.

Results: There were strong positive correlations (R > 0.99, P < 0.001), and LOA analysis revealed minimal differences between the three methods. Gaussian interpolation performed the fastest (P < 0.0001).

Conclusions: TPS and Gaussian interpolation methods demonstrated a high degree of concordance in generating HOVs for patients with XLRP. The choice of methods depends on the specific needs and priorities of researchers and clinicians, factoring in speed, accessibility, ease of implementation, and the ability to fine-tune the interpolation.

Translational relevance: Accurate HOV analysis is crucial for monitoring and assessing visual field loss progression. TPS and Gaussian interpolation methods are equally effective in generating HOV representations for patients with XLRP. The choice of method can be based on specific needs of researchers or clinicians, enabling more personalized treatment strategies and better disease management.

目的:比较薄板样条法(TPS)与高斯插值法(Gaussian interpolation)在x连锁色素性视网膜炎(XLRP)患者产生视力山(hov)的效果。方法:采用八达通900 Pro对39例XLRP患者78只眼进行视野数据采集。采用TPS、高斯和通用克里格插值方法生成hov。计算整个网格的体积(VTot)、30度区域(V30)和体积比(VRatio)。采用Pearson相关和Bland-Altman一致限(LOA)分析来评估一致性。通过将插值值与实际测量值进行比较,利用欠采样网格来评估插值的准确性。结果:三种方法之间存在强正相关(R < 0.99, P < 0.001), LOA分析显示三种方法之间差异极小。高斯插值效果最好(P < 0.0001)。结论:TPS法和高斯插值法在XLRP患者的hov生成中表现出高度的一致性。方法的选择取决于研究人员和临床医生的具体需求和优先事项,考虑到速度、可及性、实施的便利性以及微调插值的能力。翻译相关性:准确的HOV分析是监测和评估视野丧失进展的关键。TPS和高斯插值方法在生成XLRP患者的HOV表示方面同样有效。方法的选择可以根据研究人员或临床医生的具体需要,实现更个性化的治疗策略和更好的疾病管理。
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Translational Vision Science & Technology
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