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Viral condensates formed by Pea enation mosaic virus 2 sequester ribosomal components and suppress translation 豌豆花叶病毒 2 形成的病毒凝集物会封存核糖体成分并抑制翻译。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-11-13 DOI: 10.1016/j.virol.2024.110301
Shelby L. Brown, Jared P. May
Viral proteins with intrinsic disorder, such as the p26 movement protein from Pea enation mosaic virus 2 (PEMV2), can phase separate and form condensates that aid specific stages of virus replication. However, little is known about the impact of viral condensate formation on essential cellular processes, like translation. In this study, we performed mass spectrometry on affinity-purified p26 condensates and found an enrichment of RNA-binding proteins involved in translation and ribosome biogenesis. Puromycin assays and polysome profiling show that ectopic p26 expression suppresses ribosome assembly and translation in Nicotiana benthamiana, mirroring defects in late-stage PEMV2 infection. Despite interactions with the 2′-O-methyltransferase fibrillarin, p26 does not inhibit translation by altering rRNA methylation but instead binds directly to rRNAs and decreases their solubility. Disruption of ribosome assembly and translation by p26 during late PEMV2 infection may promote stages of the virus replication cycle that are incompatible with translation, including systemic movement.
具有内在紊乱的病毒蛋白,如豌豆花叶病毒 2(PEMV2)的 p26 运动蛋白,可以相分离并形成凝集物,帮助病毒复制的特定阶段。然而,人们对病毒凝聚物的形成对翻译等重要细胞过程的影响知之甚少。在这项研究中,我们对亲和纯化的 p26 凝聚物进行了质谱分析,发现其中富含参与翻译和核糖体生物发生的 RNA 结合蛋白。嘌呤霉素测定和多聚体分析表明,异位表达 p26 会抑制烟草中核糖体的组装和翻译,这反映了 PEMV2 感染后期的缺陷。尽管 p26 与 2'-O-methyltransferase fibrillarin 有相互作用,但它并没有通过改变 rRNA 甲基化来抑制翻译,而是直接与 rRNA 结合并降低其可溶性。在 PEMV2 感染后期,p26 对核糖体组装和翻译的破坏可能会促进病毒复制周期中与翻译不相容的阶段,包括系统运动。
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引用次数: 0
In vitro characteristics of purified recombinant hepatitis C virus core protein 纯化重组丙型肝炎病毒核心蛋白的体外特性。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-11-08 DOI: 10.1016/j.virol.2024.110297
Kyo Izumida , Yumiko Hara , Ryuta Iwatsuki , Sora Ohta , Keisuke Tabata , Eiji Morita
In our previous study, we established a method for purifying bacterially expressed HCV core 1–164 under non-denaturing conditions. In the present study, we elucidated the characteristics of the purified core. The purified HCV core exhibited a notable affinity for HCV RNA, with a Kd of 3 nM, as determined by a filter binding assay. Electron microscopy analysis revealed that the purified HCV core self-assembled with RNA into spherical structures approximately 50 nm in diameter. Additionally, we demonstrated the direct binding of the purified HCV core to the purified endoplasmic reticulum (ER). Moreover, lipid strip assays revealed specific binding of the purified HCV core to specific phospholipids, suggesting that the core plays a role in specific ER membrane domains. These studies reveal the biochemical characteristics of the HCV core that significantly advance our understanding of its role as a capsid protein in the viral lifecycle and pathogenesis.
在之前的研究中,我们建立了一种在非变性条件下纯化细菌表达的 HCV 核心 1-164 的方法。在本研究中,我们阐明了纯化核心的特性。经过滤结合试验测定,纯化的 HCV 核心对 HCV RNA 具有显著的亲和力,Kd 为 3 nM。电子显微镜分析表明,纯化的 HCV 核与 RNA 自组装成直径约 50 nm 的球形结构。此外,我们还证明了纯化的 HCV 核心与纯化的内质网(ER)直接结合。此外,脂质条带测定显示纯化的 HCV 核心与特定磷脂有特异性结合,这表明核心在特定的 ER 膜域中发挥作用。这些研究揭示了 HCV 核心的生化特征,极大地推动了我们对其作为囊体蛋白在病毒生命周期和致病机制中的作用的认识。
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引用次数: 0
Two amino acid pairs in the Gc glycoprotein of severe fever with thrombocytopenia syndrome virus responsible for the enhanced virulence 导致严重发热伴血小板减少综合征病毒毒力增强的 Gc 糖蛋白中的两个氨基酸对。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-11-06 DOI: 10.1016/j.virol.2024.110294
Shelly Wulandari , Samuel Nyampong , Michaela Beránková , Sithumini M.W. Lokupathirage , Kumiko Yoshimatsu , Hiroshi Shimoda , Daisuke Hayasaka
Severe fever with thrombocytopenia syndrome (SFTS) is a significant public health concern, with a high fatality rate in humans and cats. In this study, we explored the genetic determinants that contribute to the different virulence of SFTS virus (SFTSV) based on Tk-F123 and Ng-F264 strains isolated from cats. Tk-F123 was 100% lethal in type I interferon receptor-knockout mice, whereas Ng-F264 exhibited no fatality. We identified a pair of amino acid residues in the Gc protein, glycine and serine, at residues 581 and 934, respectively, derived from Tk-F123, leading to a fatal infection. Those in Ng-F264 were arginine and asparagine. These results suggest that this pair of residues affects the Gc protein function and regulates SFTSV virulence. Our findings provide useful clues for the elucidation of viral pathogenicity and the development of effective live-attenuated vaccines and antiviral strategies.
严重发热伴血小板减少综合征(SFTS)是一个重大的公共卫生问题,在人和猫中的致死率都很高。在这项研究中,我们以从猫体内分离出的Tk-F123和Ng-F264毒株为基础,探讨了导致SFTS病毒(SFTSV)不同毒力的遗传决定因素。Tk-F123在I型干扰素受体剔除小鼠中100%致死,而Ng-F264则不致死。我们确定了 Gc 蛋白中的一对氨基酸残基,即分别位于残基 581 和 934 的甘氨酸和丝氨酸,它们来自 Tk-F123,导致致命感染。而 Ng-F264 中的残基是精氨酸和天冬酰胺。这些结果表明,这对残基会影响 Gc 蛋白的功能并调控 SFTSV 的毒力。我们的发现为阐明病毒的致病性、开发有效的减毒活疫苗和抗病毒策略提供了有用的线索。
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引用次数: 0
Strengths and limitations of SARS-CoV-2 virus-like particle systems SARS-CoV-2 病毒样颗粒系统的优势和局限性。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-11-05 DOI: 10.1016/j.virol.2024.110285
Rokaia Sultana, Robert V. Stahelin
Virus-like particles (VLPs) resemble the parent virus but lack the viral genome, providing a safe and efficient platform for the analysis of virus assembly and budding as well as the development of vaccines and drugs. During the COVID-19 pandemic, caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the formation of SARS-CoV-2 VLPs was investigated as an alternative to authentic virions because the latter requires biosafety level 3 (BSL-3) facilities. This allowed researchers to model its assembly and budding processes, examine the role of mutations in variants of concern, and determine how the structural proteins interact with each other. Also, the absence of viral genome in VLPs circumvents worries of gains in infectivity via mutagenesis. This review summarizes the strengths and limitations of several SARS-CoV-2 VLP systems and details some of the strides that have been made in using these systems to study virus assembly and budding, viral entry, and antibody and vaccine development.
病毒样颗粒(VLPs)与母体病毒相似,但没有病毒基因组,为分析病毒组装和出芽以及开发疫苗和药物提供了一个安全高效的平台。在由严重急性呼吸系统综合症冠状病毒 2(SARS-CoV-2)引起的 COVID-19 大流行期间,研究人员对 SARS-CoV-2 VLPs 的形成进行了研究,以替代真实病毒,因为后者需要生物安全三级(BSL-3)设施。这样,研究人员就可以模拟病毒的组装和萌发过程,研究变异在相关变体中的作用,并确定结构蛋白之间如何相互作用。此外,VLPs 中没有病毒基因组,避免了通过诱变提高感染性的担忧。本综述总结了几种 SARS-CoV-2 VLP 系统的优势和局限性,并详细介绍了在利用这些系统研究病毒组装和出芽、病毒进入以及抗体和疫苗开发方面取得的一些进展。
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引用次数: 0
The Kaposi sarcoma herpesvirus control of monocytes, macrophages, and the tumour microenvironment 卡波西肉瘤疱疹病毒对单核细胞、巨噬细胞和肿瘤微环境的控制。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-11-05 DOI: 10.1016/j.virol.2024.110286
Sarah Neumeyer , Takanobu Tagawa
Kaposi sarcoma herpesvirus (KSHV) is an oncogenic DNA virus associated with various malignancies, including tumours like Kaposi sarcoma and Primary effusion lymphoma. Recently, the importance of the tumour microenvironment in KSHV-associated tumours is being studied. New studies utilizing human primary cells, co-culture experiments with KSHV-infected cells, and modern techniques like time-resolved single cell analysis, have significantly advanced the understanding of KSHV interactions with monocytes and macrophages. These cells play key roles in shaping the tumour microenvironment. It has become clear that KSHV-infected endothelial cells regulate the growth and the differentiation of monocytes and macrophages. Monocytes and macrophages, in turn, can regulate KSHV-infected cells in tumorigenesis and cytokine secretion, leading to the pro-tumour microenvironment. Further investigations into the viral regulation of monocytes and macrophages thus have potential to lead to the discovery of novel antitumour therapeutics.
卡波西肉瘤疱疹病毒(KSHV)是一种致癌DNA病毒,与多种恶性肿瘤有关,包括卡波西肉瘤和原发性渗出淋巴瘤等肿瘤。最近,人们正在研究肿瘤微环境在 KSHV 相关肿瘤中的重要性。利用人体原代细胞进行的新研究、与 KSHV 感染细胞进行的共培养实验以及时间分辨单细胞分析等现代技术,极大地促进了人们对 KSHV 与单核细胞和巨噬细胞相互作用的了解。这些细胞在形成肿瘤微环境方面发挥着关键作用。现已清楚,受 KSHV 感染的内皮细胞可调节单核细胞和巨噬细胞的生长和分化。单核细胞和巨噬细胞反过来又能在肿瘤发生和细胞因子分泌过程中调节 KSHV 感染细胞,从而形成有利于肿瘤的微环境。因此,进一步研究病毒对单核细胞和巨噬细胞的调控有可能发现新的抗肿瘤疗法。
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引用次数: 0
Genomic RNA recombination of porcine reproductive and respiratory syndrome virus and other arteriviruses 猪繁殖与呼吸综合征病毒及其他动情病毒的基因组 RNA 重组。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-11-04 DOI: 10.1016/j.virol.2024.110284
Junyu Tang, Yu Fan Hung, Dongwan Yoo
Arteriviruses in the Nidovirales order are single-stranded positive-sense RNA viruses infecting mammals. Arteriviruses are recognized for causing various clinical diseases, ranging from asymptomatic infections to severe conditions like respiratory syndromes and viral hemorrhagic fever. Notably, arteriviruses exhibit a high frequency of RNA recombination, and their robust recombination rates are a crucial factor in recurrent outbreaks. The recombination events also shape the countermeasures employed by arteriviruses during virus-host co-evolution and confer specific evolutionary benefits to viruses, implicating a role as a selective advantage in viral adaptation. This review delves into the molecular basis of RNA recombination in arteriviruses, the bioinformatics tools and methodologies used to visualize evolutionary relationships, and the identification of recombination breakpoints. Significant recombination events are highlighted for PRRSV and other arteriviruses, illustrating the profound implications of recombination for viral evolution and pathogenesis. Recombination between field viruses and between field viruses and vaccine strains can generate new variants with altered antigenic profiles and virulence, leading to diagnostic failure, severe clinical outcomes, and reduced vaccine efficacy. Despite the advances, further research is needed to understand recombination rates and hotspots, as well as to develop potential antiviral strategies and diagnostic approaches for arteriviruses.
Arteriviruses 属于 Nidovirales 目,是感染哺乳动物的单链正义 RNA 病毒。动脉病毒被认为可引起各种临床疾病,从无症状感染到呼吸综合征和病毒性出血热等严重疾病。值得注意的是,动脉病毒的 RNA 重组频率很高,其强大的重组率是导致疾病反复爆发的关键因素。重组事件还决定了动脉病毒在病毒-宿主共同进化过程中采取的对策,并为病毒带来了特定的进化益处,这意味着病毒在适应过程中发挥着选择性优势的作用。本综述深入探讨了动脉病毒中 RNA 重组的分子基础、用于可视化进化关系的生物信息学工具和方法,以及重组断点的鉴定。重点介绍了 PRRSV 和其他动脉病毒的重要重组事件,说明了重组对病毒进化和致病机理的深远影响。野外病毒之间以及野外病毒与疫苗毒株之间的重组可产生抗原谱和毒力发生改变的新变种,导致诊断失败、严重的临床结果和疫苗效力降低。尽管取得了进展,但仍需进一步研究,以了解重组率和热点,并开发潜在的抗病毒策略和动脉病毒诊断方法。
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引用次数: 0
Recombinant feline herpesvirus-1 (FHV-1) expressing granulocyte colony-stimulating factor (G-CSF) exhibits enhanced protective efficacy in felines 表达粒细胞集落刺激因子(G-CSF)的重组猫疱疹病毒-1(FHV-1)在猫科动物中表现出更强的保护效力。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-10-31 DOI: 10.1016/j.virol.2024.110282
Mengfang Yang , Yuzhou Jiao , Yuanyuan Yan , Zhen Fu , Lisha Li , Zirui Liu , Lingying Fang , Xiaoshuai Hu , Benyuan Wu , Yuejun Shi , Mengxia Li , Zhou Shen , Guiqing Peng
Vaccine efficacy relies not only on antigens but also on immunomodulatory agents/adjuvants that are often used to stimulate the immune system and enhance the immune response. However, current immunomodulatory agents are used to increase the immune response induced by viral or bacterial inactivated vaccine antigens, bacterial toxoids or polysaccharides but not attenuated live viruses. Based on the immunomodulatory functions of G-CSF and the characteristics of feline herpesvirus-1 (FHV-1) as an expression vector, a recombinant virus expressing feline G-CSF (WH2020-ΔTK/gI/gE-G-CSF) was constructed. The growth dynamics of WH2020-ΔTK/gI/gE-G-CSF were similar to those of WH2020-ΔTK/gI/gE. Compared with kittens vaccinated with WH2020 Δ TK/gI/gE, felines inoculated with WH2020 ΔTK/gI/gE-G-CSF produced more neutralizing antibodies and neutrophils, further alleviating clinical symptoms after FHV-1 infection. Taken together, our results revealed the potential of G-CSF as an ideal immune potentiator that can augment immune responses to FHV-1 and even other attenuated live vaccines.
疫苗的疗效不仅取决于抗原,还取决于免疫调节剂/佐剂,它们通常用于刺激免疫系统和增强免疫反应。然而,目前的免疫调节剂用于提高病毒或细菌灭活疫苗抗原、细菌毒素或多糖诱导的免疫反应,而不是减毒活疫苗。根据 G-CSF 的免疫调节功能和猫疱疹病毒-1(FHV-1)作为表达载体的特点,构建了表达猫 G-CSF 的重组病毒(WH2020-ΔTK/gI/gE-G-CSF)。WH2020-ΔTK/gI/gE-G-CSF的生长动态与WH2020-ΔTK/gI/gE相似。与接种WH2020 ΔTK/gI/gE的幼猫相比,接种WH2020 ΔTK/gI/gE-G-CSF的猫产生了更多的中和抗体和中性粒细胞,进一步减轻了FHV-1感染后的临床症状。综上所述,我们的研究结果揭示了 G-CSF 作为一种理想的免疫增强剂的潜力,它可以增强对 FHV-1 甚至其他减毒活疫苗的免疫反应。
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引用次数: 0
A Nanobody-based TRIM-away targets the intracellular protein degradation of African swine fever virus 基于纳米抗体的 TRIM-away 可靶向非洲猪瘟病毒的胞内蛋白降解。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-10-31 DOI: 10.1016/j.virol.2024.110283
Fayu Yang , Yuxi Yang , Xiaoyun Li , Saba Aliyari , Guoliang Zhu , Zixiang Zhu , Haixue Zheng , Shilei Zhang
African swine fever virus (ASFV) is the causative agent of African swine fever (ASF), a hemorrhagic illness with high fatality rates in domestic pigs that has resulted in a substantial socio-economic loss and threatens the global pork industry. Very few safe and efficient vaccines or compounds against ASF are commercially available, thus developing new antiviral strategies is urgently required. Targeted protein degradation (TPD) has emerged as one of the most innovative strategies for drug discovery. In this study, we generate Nanobody-based TRIM-aways specifically binding with and targeting ASFV-encoded structural proteins p30, p54, and p72 for degradation. Furthermore, nanobody-based trim-aways exhibit robust viral structural protein degradation capabilities in ASFV-infected iPAM and MA104 cells through both proteasomal and lysosomal pathways, concurrently demonstrating potent anti-ASFV activity with less viral production. Our study highlights the Nanobody-based TRIM-away targeting viral protein degradation as a potential candidate for the development of a novel antiviral strategy against ASF.
非洲猪瘟病毒(ASFV)是非洲猪瘟(ASF)的病原体,这是一种家猪死亡率很高的出血性疾病,造成了巨大的社会经济损失,并威胁着全球猪肉产业。目前市面上很少有针对非洲猪瘟的安全高效疫苗或化合物,因此迫切需要开发新的抗病毒策略。靶向蛋白降解(TPD)已成为药物研发中最具创新性的策略之一。在这项研究中,我们生成了基于纳米抗体的 TRIM-aways,它们能与 ASFV 编码的结构蛋白 p30、p54 和 p72 特异性结合并靶向降解。此外,基于纳米抗体的TRIM-aways在ASFV感染的iPAM和MA104细胞中通过蛋白酶体和溶酶体途径表现出强大的病毒结构蛋白降解能力,同时在减少病毒产生的同时表现出强大的抗ASFV活性。我们的研究表明,以病毒蛋白降解为靶点的纳米抗体 TRIM-away 是开发新型 ASF 抗病毒策略的潜在候选药物。
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引用次数: 0
Establishment of a rhesus macaque model for coxsackievirus A6 infection: Pilot study to evaluate infection initiated through the respiratory or digestive track 建立猕猴柯萨奇病毒 A6 感染模型:评估经呼吸道或消化道感染的试点研究。
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-10-31 DOI: 10.1016/j.virol.2024.110268
Suqin Duan , Jinghan Hou , Yanyan Li, Ming Zhang, Yuan Zhao, Weihua Jin, Mingxue Li, Wenting Sun, Hongjie Xu, Quan Liu, Lixiong Chen, Zijun Deng, Fengmei Yang, Shaohui Ma, Zhanlong He
Coxsackievirus A6 (CVA6) is a primary pathogen associated with hand, foot, and mouth disease (HFMD) and is typified by fever, rashes or herpetic lesions at distinct locations. Although HFMD patients exhibit mild symptoms, a subset of patients may develop severe complications, such as viral encephalitis, myocarditis, pneumonia, and neurological disorders. However, in addition to rodent models, such as the CVA6-infected mouse model, no definitive nonhuman primate animal model or related research or analysis tool is available, which makes the development of suitable nonhuman primate animal models particularly crucial. In this study, 3- to 4-month-old rhesus monkeys were infected via the respiratory or digestive tract, and the pathogenic, pathological, and immunological alterations following CVA6 infection were investigated. The results revealed that the infected rhesus monkeys exhibited symptoms similar to those of patients, including signs of HFMD, blood cell changes, viremia, viral excretion, and inflammatory reactions during the acute phase (1–11 days). Pathological observations revealed inflammatory reactions in the intestinal and lymph node tissues. Notably, the acute symptoms gradually waned in the recovery phase (12–120 days), and a high level of neutralizing antibodies was sustained. Intriguingly, no significant disparity was observed between the infections initiated via the respiratory or digestive tract in terms of clinical symptoms, hemogram results or virus shedding. Overall, this study yielded a comprehensive dataset regarding the physiological, pathological, and immunological outcomes of CVA6 infection in a primate host, enhancing our comprehension of the mechanism of CVA6 infection and providing essential data for related vaccine and drug development.
柯萨奇病毒 A6(CVA6)是与手足口病(HFMD)相关的主要病原体,主要表现为发热、皮疹或不同部位的疱疹。虽然手足口病患者症状轻微,但有一部分患者可能会出现严重的并发症,如病毒性脑炎、心肌炎、肺炎和神经系统疾病。然而,除了 CVA6 感染小鼠模型等啮齿类动物模型外,目前还没有明确的非人灵长类动物模型或相关研究或分析工具,因此开发合适的非人灵长类动物模型尤为重要。在这项研究中,研究人员通过呼吸道或消化道感染了 3 至 4 个月大的恒河猴,并研究了恒河猴感染 CVA6 后的致病、病理和免疫学改变。结果显示,受感染的恒河猴在急性期(1-11 天)表现出与患者相似的症状,包括手足口病症状、血细胞变化、病毒血症、病毒排泄和炎症反应。病理观察显示,肠道和淋巴结组织出现炎症反应。值得注意的是,急性症状在恢复期(12-120 天)逐渐减弱,高水平的中和抗体得以维持。耐人寻味的是,通过呼吸道或消化道引发的感染在临床症状、血象图结果或病毒脱落方面均无明显差异。总之,这项研究为灵长类宿主感染 CVA6 后的生理、病理和免疫学结果提供了一个全面的数据集,加深了我们对 CVA6 感染机制的理解,并为相关疫苗和药物开发提供了重要数据。
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引用次数: 0
Recognition of novel proteins encoded by an aquareovirus using mass spectrometry 利用质谱法识别水生病毒编码的新型蛋白质
IF 2.8 3区 医学 Q3 VIROLOGY Pub Date : 2024-10-31 DOI: 10.1016/j.virol.2024.110281
Fei Yu, Siyang Song, Jiehua Xu, Kai Hao, Yu Wang, Zhe Zhao

Aquareovirus

a genus of within the family Spinareoviridae, order Reovirales, infects aquatic animals. Their genomes comprise 11 segments of double-stranded RNA, which function directly as mRNAs upon release into the cytoplasm of infected cells. Here, liquid chromatography-tandem mass spectrometry was employed to annotate small coding ORFs in the Aquareovirus-C genome. Its plus-strand RNA of segment 8 (S8) contains a novel protein-coding frame (NS15), and S5 seems to has an additional reading frame (NS18) with a putative non-AUG initiation codon. Among them, NS15 polypeptide has been proved by immunoblotting assay. Remarkably, the S4 and S11 minus-strand mRNAs may encode polypeptides, suggesting ambisense polarity of the two segmented RNAs. And the newly discovered NS12 ORF in 2019, from viral tricistronic S7 mRNA, was also confirmed by this mass-spectrometry data. Taken together, these identified new ORFs reveal the genome-coding complexity of Aquareovirus-C.
水生病毒属 Spinareoviridae 科 Reovirales 目,感染水生动物。它们的基因组由 11 段双链 RNA 组成,在释放到受感染细胞的细胞质中时直接作为 mRNA 起作用。本文采用液相色谱-串联质谱法注释了水生病毒-C基因组中的小编码ORF。其第8段的加链RNA(S8)含有一个新的蛋白质编码框(NS15),S5似乎有一个额外的阅读框(NS18),并有一个假定的非AUG起始密码子。其中,NS15 多肽已通过免疫印迹试验得到证实。值得注意的是,S4 和 S11 负链 mRNA 可能编码多肽,这表明这两种分段 RNA 具有歧义极性。质谱数据还证实了 2019 年新发现的 NS12 ORF,该 ORF 来自病毒三链式 S7 mRNA。综上所述,这些新发现的ORF揭示了水生病毒-C基因组编码的复杂性。
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引用次数: 0
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