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Meeting report: The 3rd international conference of the World Society for Virology (WSV 2025) - The Virosphere of Our Cellular World 会议报告:第三届世界病毒学学会国际会议(WSV 2025) -我们细胞世界的病毒圈。
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2026-01-07 DOI: 10.1016/j.virol.2026.110792
Maria Söderlund-Venermo , Nor Azfa Binti Johari , Azira Muhamad , Khatijah Yusoff , Sayed F. Abdelwahab , Matthew D. Moore , William C. Wilson , Marietjie Venter , Yashpal S. Malik , Shailendra K. Saxena , Elsayed M. Abdelwhab , Stephan Winter , Burtram C. Fielding , Vikram N. Vakharia , Anupam Varma , Richard J. Kuhn , Ahmed S. Abdel-Moneim
The 3rd International Conference of the World Society for Virology (WSV 2025) was held in May 6–8, 2025, in Kuala Lumpur, Malaysia. WSV2025 adopted the integrative theme "The Virosphere of Our Cellular World." This theme denotes the universal and intricate relationships between viruses and their cellular hosts across all domains of life. The conference attracted 291 participants from 27 countries, featuring a scientific program of 83 talks and numerous poster presentations spanning human, animal, plant, insect, and bacterial viruses at basic, clinical and applied levels. This report summarizes the program highlights, key scientific discussions, and significant outcomes of the conference, confirming the WSV's role as a unifying platform for the global virology community since its founding in 2017.
第三届世界病毒学学会国际会议(WSV 2025)于2025年5月6日至8日在马来西亚吉隆坡举行。世界病毒世界大会2025的综合主题是“我们细胞世界的病毒圈”。这一主题表明病毒和它们的细胞宿主在生命的所有领域之间普遍而复杂的关系。会议吸引了来自27个国家的291名与会者,会议的科学计划包括83场演讲和大量海报展示,涵盖人类、动物、植物、昆虫和细菌病毒的基础、临床和应用水平。本报告总结了会议的亮点、主要科学讨论和重要成果,确认了WSV自2017年成立以来作为全球病毒学界统一平台的作用。
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引用次数: 0
Characterizing the interactions between murine cytomegalovirus M72 and the carbon catabolite repression 4-negative on TATA-less (CCR4-NOT) complex 小鼠巨细胞病毒M72与碳分解代谢物抑制4-阴性TATA-less (CCR4-NOT)复合物的相互作用
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2026-01-07 DOI: 10.1016/j.virol.2026.110791
Olivia N. Brahms , Sandhya Gopal , Amanda Y. Xia , Jason W. Upton
Despite being an important human pathogen, many Human cytomegalovirus (HCMV) gene products remain uncharacterized. The betaherpesvirus conserved core genes, UL72 from HCMV and M72, the murine cytomegalovirus (MCMV) homolog, were initially designated as the 2′-deoxyuridine 5′-triphosphate pyrophosphatase (dUTPase) homolog. However, other researchers and we have shown that both are non-essential for replication and lack dUTPase activity. Using a proteomics approach, we previously established a set of candidates of functionally interacting host proteins with M72. Among them, several subunits of the carbon catabolite repression 4 (CCR4)–negative on TATA-less (NOT) complex were identified as likely functional interactors with M72. The CCR4-NOT complex is a multifunctional, heteromeric complex regarded as the main deadenylase in eukaryotic cells. Interactions between M72 and the CCR4-NOT complex were confirmed during infection and mapped. Here, we show that M72 binds to regions of CNOT1, the major scaffold and coordinator of the complex, which are responsible for recruiting the deadenylase subunits. We also reveal that M72 and CNOT1 are both required to augment normal MCMV replication. These results suggest a novel function for M72 in modulating the CCR4-NOT complex, as well as a pro-viral role for CNOT1 in MCMV pathogenesis.
尽管是一种重要的人类病原体,但许多人类巨细胞病毒(HCMV)基因产物仍未被表征。乙型疱疹病毒保守的核心基因UL72和小鼠巨细胞病毒(MCMV)同源基因M72最初被确定为2 ' -脱氧尿苷5 ' -三磷酸焦磷酸酶(dUTPase)同源基因。然而,我们和其他研究人员已经证明,两者都不是复制所必需的,并且缺乏dUTPase活性。利用蛋白质组学方法,我们之前建立了一组候选的与M72功能相互作用的宿主蛋白。其中,碳分解代谢抑制4 (CCR4) -阴性的TATA-less (NOT)复合体的几个亚基被确定为可能与M72的功能相互作用物。CCR4-NOT复合物是一种多功能异聚复合物,被认为是真核细胞中主要的deadenylase。M72与CCR4-NOT复合物之间的相互作用在感染过程中被证实并被绘制。在这里,我们发现M72结合到CNOT1的区域,CNOT1是复合物的主要支架和协调物,负责招募死基化酶亚基。我们还发现M72和CNOT1都是增加正常MCMV复制所必需的。这些结果表明M72在调节CCR4-NOT复合体中的新功能,以及CNOT1在MCMV发病机制中的前病毒作用。
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引用次数: 0
Adjuvants enhance protective antibodies against seasonal influenza viruses following a single vaccination of Fluzone 佐剂增强对季节性流感病毒的保护性抗体接种后,单一的流感疫苗
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2026-01-06 DOI: 10.1016/j.virol.2026.110787
Matthew H. Thomas , Michael A. Carlock , Ted M. Ross
Fluzone is a commercial, split-inactivated influenza virus vaccine produced from embryonated chicken eggs and administered via intramuscular injection. One strategy to increase the potency of this vaccine is to formulate with an effective adjuvant. To address this goal, mice were vaccinated with Fluzone mixed with either squalane oil-in-water adjuvant (Addavax) or a combination of a synthetic toll-like receptor (TLR) 4 and TLR7/8 agonist (TRAC478). Mice vaccinated with vaccine plus adjuvant had higher anti-HA binding antibodies and hemagglutination-inhibition (HAI) titers than mice administered unadjuvanted vaccine following a single vaccination. In general, mice vaccinated with Fluzone plus TRAC478 had higher HAI and neutralizing titers after the first vaccination compared to mice vaccinated with Fluzone plus Addavax. All vaccinated mice challenged with an H1N1 influenza virus (A/Brisbane/02/2018) lost little weight and survived challenge. Mice vaccinated with Fluzone plus either adjuvant had no detectable lung viral titers at day 3 post-challenge. Mice vaccinated with unadjuvanted Fluzone or mock vaccinated mice had 3-5 log higher viral titers. Vaccinated mice challenged with an H3N2 influenza virus (A/Switzerland/9715293/2013) lost, on average, 10–15 % of their original body weight by day 3 post-challenge but slowly recovered with viral lung titers that were 2–2.5 logs lower than mice administered unadjuvanted Fluzone. Lungs collected from mice vaccinated with Fluzone plus TRAC478 had low levels of lung infiltrating cells following a single vaccination. Overall, the use of adjuvant, particularly TRAC478, enhanced the elicitation of protective antibodies elicited by Fluzone following a single vaccination.
Fluzone是一种商业化的分裂灭活流感病毒疫苗,由胚胎鸡蛋制成,通过肌肉注射给药。提高这种疫苗效力的一种策略是加入有效的佐剂。为了实现这一目标,小鼠接种了与角鲨烷水浸油佐剂(Addavax)或合成toll样受体(TLR) 4和TLR7/8激动剂(TRAC478)混合的Fluzone疫苗。在单次接种后,接种疫苗加佐剂的小鼠比未接种佐剂的小鼠具有更高的抗ha结合抗体和血凝抑制(HAI)滴度。一般来说,与接种Fluzone + Addavax的小鼠相比,接种Fluzone + TRAC478的小鼠在第一次接种后具有更高的HAI和中和滴度。所有接种了H1N1流感病毒(A/Brisbane/02/2018)的小鼠体重几乎没有下降,并且存活下来。注射了Fluzone和任何一种佐剂的小鼠在攻毒后第3天没有检测到肺病毒滴度。接种无佐剂流感疫苗的小鼠或模拟接种疫苗的小鼠的病毒滴度提高了3-5倍。注射H3N2流感病毒(A/ swiss /9715293/2013)疫苗的小鼠在注射后第3天平均失去了原来体重的10 - 15%,但恢复缓慢,病毒肺滴度比未注射流感剂的小鼠低2-2.5个对数。接种了Fluzone + TRAC478疫苗的小鼠肺部在单次接种后具有低水平的肺浸润细胞。总的来说,佐剂的使用,特别是TRAC478,增强了单次接种后由Fluzone引起的保护性抗体的激发。
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引用次数: 0
Molecular epidemiological investigation and genetic diversity of bovine enterovirus in China 中国牛肠病毒分子流行病学调查及遗传多样性
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2026-01-05 DOI: 10.1016/j.virol.2026.110786
Kun Xu , Chen Yao , Yueying Wang , Shuang Guo , Jiajia Pan , Guoyu Yang
Bovine enterovirus (BEV) is an important pathogen causing calf diarrhea and has been detected in the diarrheic calf feces, although its pathogenicity remains unclear. This study aims to investigate the epidemiological profile and genetic diversity of BEV. A total of 356 clinical samples were analyzed by RT-PCR, including feces and rectal swabs from diarrheic calves in 11 cities across four provinces of China during 2024, the results showed a BEV-positive rate of 5.9 % (21/356, CI: 3.89–8.85). The four-province survey revealed differential BEV prevalence, with the highest rate observed in Qinghai (14.29 %). Five subtypes (E2, F1, F2, F3, F8) were found to co-circulate, notably E2, F3 and F8 in Inner Mongolia. Genomic analyses indicated that purifying selection dominates BEV evolution. Following sequencing of ten P1 nucleotide fragments, sequence comparison and phylogenetic analysis were performed based on P1 and VP1. The results showed that the obtained sequences clustered within a branch containing BEV subtypes E2, F3, F2, F1, and F8, and were genetically more closely related to strains from Australia, Japan, and China. Additionally, through the comparison and analysis of the majority of amino acid residues entropy of VP1, VP2 and VP3, it was determined that the BEV VP1 protein showed a high level of genetic diversity. This study provides powerful insight for us to further understand the epidemic status and evolution of BEV in China.
牛肠病毒(BEV)是引起犊牛腹泻的重要病原体,在犊牛腹泻粪便中检测到,但其致病性尚不清楚。本研究旨在调查BEV的流行病学特征和遗传多样性。采用RT-PCR方法对2024年中国4省11个城市腹泻犊牛粪便和直肠棉子等356份临床样本进行分析,结果显示bev阳性率为5.9% (21/356,CI: 3.89 ~ 8.85)。四省调查显示BEV患病率存在差异,其中青海省最高(14.29%)。E2、F1、F2、F3、F8共流行,其中内蒙古地区以E2、F3、F8为主。基因组分析表明,纯选择主导了纯电动汽车的进化。对10个P1核苷酸片段进行测序,基于P1和VP1进行序列比较和系统发育分析。结果表明,获得的序列聚集在一个包含BEV E2、F3、F2、F1和F8亚型的分支内,与来自澳大利亚、日本和中国的菌株具有更近的遗传亲缘关系。此外,通过对VP1、VP2和VP3的大部分氨基酸残基熵的比较分析,确定BEV VP1蛋白具有较高的遗传多样性。本研究为我们进一步了解纯电动汽车在中国的流行状况和演变提供了有力的见解。
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引用次数: 0
Chikungunya virus non-structural protein 2 (nsP2) inhibits RIG-I and TLR-mediated immune response 基孔肯雅病毒非结构蛋白2 (nsP2)抑制rig - 1和tlr介导的免疫反应
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2025-12-22 DOI: 10.1016/j.virol.2025.110777
Shivani Raj, Minnah Irfan, C.T. Ranjith-Kumar
Chikungunya virus (CHIKV) is a single-stranded positive-sense RNA virus that employs various strategies to evade the host immune response. CHIKV non-structural protein 2 (nsP2) is one of the viral-encoded proteins essential for viral replication as well as modulation of the immune response. In this study, we demonstrated that CHIKV nsP2 suppresses both Retinoic acid-inducible gene I (RIG-I)-like receptors (RLRs) and Toll-like receptors (TLRs) signaling pathways. Domain mapping of nsP2 identified that the N-terminal region encompassing the N-terminal domain and the helicase domain (NH) is responsible for the inhibition. Furthermore, site-directed mutagenesis experiments showed that a functional helicase is necessary for inhibiting interferon production, but the C-terminal VLoop region, previously implicated in host transcriptional shutoff is not. Lastly, we demonstrated that nsP2 disrupts two key immune RLRs and TLRs mediated signaling pathways by interfering with the common proteins TANK-binding kinase 1 (TBK1) and interferon regulatory factor 3 (IRF3), which are involved in both signaling pathways. These findings enhance our understanding of CHIKV immune evasion strategies and offer potential targets for the development of antiviral therapeutics.
基孔肯雅病毒(CHIKV)是一种单链正义RNA病毒,采用多种策略逃避宿主免疫反应。CHIKV非结构蛋白2 (nsP2)是一种病毒编码蛋白,对病毒复制和调节免疫应答至关重要。在这项研究中,我们证明了CHIKV nsP2抑制视黄酸诱导基因I (RIG-I)样受体(RLRs)和toll样受体(TLRs)信号通路。nsP2的结构域定位鉴定了包含n端结构域和解旋酶结构域(NH)的n端区域负责抑制。此外,位点定向诱变实验表明,抑制干扰素的产生需要功能性解旋酶,但先前涉及宿主转录关闭的c端VLoop区域不是必需的。最后,我们证明了nsP2通过干扰坦克结合激酶1 (TBK1)和干扰素调节因子3 (IRF3),破坏了两个关键的免疫RLRs和TLRs介导的信号通路,这两个信号通路都参与。这些发现增强了我们对CHIKV免疫逃避策略的理解,并为开发抗病毒疗法提供了潜在的靶点。
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引用次数: 0
Vaccinia virus-based SARS-CoV-2 vaccine prevents lung immunopathology without antibody-dependent enhancement in female rhesus macaques 基于牛痘病毒的SARS-CoV-2疫苗在雌性恒河猴无抗体依赖性增强的情况下预防肺部免疫病理
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2025-12-18 DOI: 10.1016/j.virol.2025.110778
Cong Thanh Nguyen , Misako Nakayama , Fumihiko Yasui , Hirohito Ishigaki , Kenichi Otaki , Naoki Yamamoto , Takahiro Sanada , Kenzaburo Yamaji , Tomoko Honda , Yusuke Matsumoto , Naoko Kitagawa , Koji Ishii , Tomoe Kusayanagi , Yoshiki Yagi , Michinori Kohara , Yasushi Itoh
We have developed a recombinant vaccinia vaccine (rDIs-S) against SARS-CoV-2 from an attenuated vaccinia virus (Dairen-I minute-pock variant: DIs strain). The rDIs-S vaccine containing DNA of an S gene of SARS-CoV-2 early-pandemic Pango B strain protected cynomolgus macaques from severe pneumonia caused by a SARS-CoV-2 Pango A strain and induced a broad reactive neutralization antibody against SARS-CoV-2 variants (B.1.1.7, B.1.351, and P.1) in our previous study. In the present study, to further confirm the safety and efficacy of rDIs-S, the vaccine (1 × 108 PFU) was inoculated intradermally into rhesus macaques, which showed antibody-dependent enhancement (ADE) after vaccination with another vaccinia virus vector, MVA carrying a SARS-CoV S gene, and challenge infection with SARS-CoV. The rDIs-S vaccination induced neutralization activity against multiple SARS-CoV-2 variants in plasma of rhesus macaques [100 % (6/6 macaques)] and reduced viral replication of the B.1.1.7 and B.1.351 variants and infiltration of T cells and macrophages into the lungs of rhesus macaques [100 % (5/5 macaques)] after challenge infection with 1 × 107 TCID50 of the two SARS-CoV-2 variants. In the presence of plasma of vaccinated macaques, viral RNA levels in human FcγR-positive cells increased slightly by up to 1.8-folds, but they were much lower than those previously reported in sera of mRNA-vaccinated individuals, in which ADE was anticipated (ratios approximately 10–1000). Thus, rDIs-S induced protective immune responses against SARS-CoV-2 B.1.1.7 and B.1.351 and vaccination with rDIs-S did not enhance pneumonia or replication of SARS-CoV-2, indicating the efficacy and safety of rDIs-S in the rhesus macaque model.
我们从一种减毒牛痘病毒(Dairen-I minute-pock variant: DIs株)研制了一种针对SARS-CoV-2的重组痘苗(rDIs-S)。在我们之前的研究中,含有SARS-CoV-2 Pango - B毒株S基因DNA的rDIs-S疫苗保护食蟹猴免受SARS-CoV-2 Pango - a毒株引起的严重肺炎,并诱导了针对SARS-CoV-2变体(B.1.1.7, B.1.351和P.1)的广泛反应性中和抗体。本研究为进一步证实rDIs-S的安全性和有效性,将该疫苗(1 × 108 PFU)皮内接种恒河猴,恒河猴在接种另一种携带SARS-CoV S基因的牛痘病毒载体MVA后出现抗体依赖性增强(ADE),并挑战SARS-CoV感染。rDIs-S疫苗在恒河猴血浆中诱导了对多种SARS-CoV-2变体的中和活性[100%(6/6只恒河猴)],并在两种SARS-CoV-2变体的1 × 107 TCID50攻击感染后降低了B.1.1.7和B.1.351变体的病毒复制和T细胞和巨噬细胞向恒河猴肺部的浸润[100%(5/5只恒河猴)]。在接种疫苗的猕猴血浆中,人类fc γ r阳性细胞中的病毒RNA水平略微增加了1.8倍,但远低于先前报道的mrna疫苗接种个体血清中的病毒RNA水平,后者预计会发生ADE(比率约为10-1000)。因此,rDIs-S诱导了针对SARS-CoV-2 B.1.1.7和B.1.351的保护性免疫反应,接种rDIs-S并没有增强肺炎或SARS-CoV-2的复制,表明rDIs-S在恒河猴模型中的有效性和安全性。
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引用次数: 0
Decoding cross-serotype interference in duck hepatitis viruses: Trivalent IgY targeting DHAV-1, DHAV-3 and DAstV-1 解码鸭肝炎病毒的跨血清型干扰:靶向DHAV-1、DHAV-3和DAstV-1的三价IgY
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2025-12-16 DOI: 10.1016/j.virol.2025.110776
Saisai Zhao , Dongwei Wang , Yafei Qin , Mingtian Mao , Yiman Li , Yizhang Hao , Yaru Fan , Dalin He , Yi Tang , Youxiang Diao
To combat the emerging challenge of co-circulating hepatotropic pathogens, duck hepatitis A virus type 1 (DHAV-1), duck hepatitis A virus type 3 (DHAV-3), and Duck astrovirus type 1 (DAstV-1), complicating duck viral hepatitis (DVH) control in China, we engineered a novel trivalent egg yolk immunoglobulin (IgY) preparation designed to transcend serotype-specific limitations and enhance passive immunization efficacy. The polyvalent antibody was produced through multistage immunization protocols in high-yielding laying hens, followed by octanoic acid fractionation purification. The preparation exhibited a potent in vitro neutralization index of up to 1:143 against DHAV-1 and 1:256 against DHAV-3 while demonstrating robust immunoreactivity against the DAstV-1 antibody titer of 1:512 via ELISA. Prophylactic administration conferred complete protection (100 %) in challenge models. Therapeutic intervention yielded survival rates of 70 % for DHAV-1, 90 % for DHAV-3, and 80 % for DAstV-1. To our knowledge, this is the first report of a trivalent IgY agent that concurrently neutralizes the three predominant hepatotropic viruses (DHAV-1, DHAV-3, and DAstV-1) complicating DVH, establishing a broad-spectrum immunoprophylactic and therapeutic strategy.
为了应对鸭甲型肝炎病毒1型(DHAV-1)、鸭甲型肝炎病毒3型(DHAV-3)和鸭星形病毒1型(DAstV-1)共循环的新挑战,我们设计了一种新的三价蛋黄免疫球蛋白(IgY)制剂,旨在超越血清型特异性限制,提高被动免疫效果。该多价抗体通过高产蛋鸡多阶段免疫制备,然后辛酸分离纯化。该制剂对DHAV-1和DHAV-3的体外中和指数分别为1∶143和1∶256,对DAstV-1抗体的免疫反应性为1∶512。在挑战模型中,预防性给予完全保护(100%)。治疗干预使DHAV-1的存活率为70%,DHAV-3的存活率为90%,DAstV-1的存活率为80%。据我们所知,这是首次报道一种三价IgY药物同时中和三种主要的DVH伴发性肝病毒(DHAV-1、DHAV-3和DAstV-1),建立了一种广谱免疫预防和治疗策略。
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引用次数: 0
Genetic characterization and isolation of feline astrovirus in domestic cats in Guangxi, China 广西家猫星状病毒的遗传特征及分离
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2025-12-11 DOI: 10.1016/j.virol.2025.110774
Rui Xue , Rang Wang , Haodong Zhang , Weijie Xu , Yiting Liu , Donglingzi Cao , Jiamo Huang , Jinrui Chen , Shixin Liu , Huabo Zhou , Yifeng Qin , Kang Ouyang , Yeshi Yin , Zuzhang Wei , Weijian Huang , Jianming Long , Ying Chen
Feline astrovirus (FAstV), as an intestinal pathogen, has been widely detected worldwide, but little is known about its genetic evolutionary diversity and isolation. This study presents the comprehensive molecular epidemiological investigation of FAstV in Guangxi, China. Screening 775 feline intestinal samples revealed an FAstV prevalence of 4.25 % (33/775), with 39.4 % (13/33) of positive cases co-infected with six other major feline enteric viruses. Notably, FAstV-feline panleukopenia virus (FPV) co-infection emerged as the predominant viral combination (27.27 %, 9/33), suggesting potential synergistic pathogenesis in feline gastroenteritis cases. Phylogenetic analysis of 13 ORF2 genes and 2 complete genomes identified three distinct FAstV genogroups (G1-G3) with significant amino acid divergence (0.445–0.765 p-distance), supporting their classification as separate genotypes. Additionally, we successfully isolated a novel FAstV strain (GXNNF10-2024) in trypsin-supplemented feline kidney-derived FK81 cell cultures, which exhibited characteristic cytopathic effects (CPEs) and was confirmed by RT-PCR and immunofluorescence. These findings significantly enhance our understanding of FAstV genetic diversity, provide essential tools for viral isolation, and establish a foundation for developing diagnostic and control strategies against this emerging feline enteric pathogen.
猫星状病毒(FAstV)作为一种肠道病原体,在世界范围内已被广泛发现,但对其遗传进化多样性和分离性知之甚少。本文对广西地区FAstV病毒进行了全面的分子流行病学调查。在775份猫肠道样本中,FAstV阳性率为4.25%(33/775),其中39.4%(13/33)阳性病例同时感染其他6种主要猫肠道病毒。值得注意的是,fastv -猫泛白细胞减少病毒(FPV)合并感染是主要的病毒组合(27.27%,9/33),提示猫胃肠炎病例可能存在协同发病机制。对13个ORF2基因和2个完整基因组的系统发育分析发现,FAstV基因组(G1-G3)具有显著的氨基酸差异(0.445-0.765 p-distance),支持它们作为独立的基因型。此外,我们成功地在添加胰蛋白酶的猫肾源性FK81细胞培养物中分离出一种新的FAstV菌株(GXNNF10-2024),该菌株表现出特征性的细胞病变效应(CPEs),并通过RT-PCR和免疫荧光证实。这些发现显著增强了我们对FAstV遗传多样性的理解,为病毒分离提供了必要的工具,并为制定针对这种新兴猫科肠道病原体的诊断和控制策略奠定了基础。
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引用次数: 0
Proteomic analysis of plant interactors with the RNA silencing suppressor V2 encoded by croton yellow vein mosaic virus 巴豆黄脉花叶病毒RNA沉默抑制因子V2编码植物相互作用物的蛋白质组学分析
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2025-12-09 DOI: 10.1016/j.virol.2025.110773
Ying Zhai , Hao Peng , Prabu Gnanasekaran , Anirban Roy , Hanu R. Pappu
Croton yellow vein mosaic virus (CYVMV) is a Begomovirus infecting a wide range of vegetables, ornamentals, and weeds. The monopartite CYVMV genome comprises a single-stranded circular DNA (DNA-A). It is also associated with a DNA-betasatellite (DNA-β) called croton yellow vein mosaic betasatellite (CroYVMB). While DNA-A encodes three RNA silencing suppressors viz. V2/C2/C4, DNA-β encodes βC1, which also acts as silencing suppressor. The V2 protein physically interacts with both itself and V1, which is critical for cell-to-cell movement of CYVMV. However, little is known about the molecular mechanism of how V2 suppresses plant RNA silencing machinery and the defense system. Here, we identified twenty-three putative V2-interacting proteins in Nicotiana benthamiana via affinity purification-mass spectrometry (AP-MS) and performed gene ontology (GO) analysis on these V2-interacting candidates. Particularly, two N. benthamiana (Nb) proteins, Ankyrin repeat domain containing protein (NbANK) and Receptor for Activated C Kinase 1 (NbRACK1), were verified to physically interact with V2 in both yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC). Compared to NbRACK1, NbANK exhibited much stronger binding capacity with V2 in Y2H assays, which was consistent with structural predictions of V2-NbANK and V2-NbRACK1 complexes using AlphaFold 3. Virus-induced gene silencing (VIGS) assays using the pTRV vectors demonstrated that the silencing of NbANK significantly increased CYVMV abundance in N. benthamiana, but did not lead to enhanced pathogenicity. In conclusion, our proteomic analysis identifies specific CYVMV V2 interactors in plants, and NbANK is used as an example to show their critical roles in CYVMV propagation.
Croton yellow vein mosaic virus (CYVMV)是一种感染多种蔬菜、观赏植物和杂草的begomavirus。单分子CYVMV基因组由单链环状DNA (DNA- a)组成。它还与一种称为CroYVMB的DNA-β卫星(DNA-β)有关。DNA- a编码3种RNA沉默抑制因子,即V2/C2/C4, DNA-β编码同样具有沉默抑制作用的βC1。V2蛋白与自身和V1相互作用,这对CYVMV的细胞间运动至关重要。然而,关于V2如何抑制植物RNA沉默机制和防御系统的分子机制知之甚少。在这里,我们通过亲和纯化-质谱(AP-MS)鉴定了23个可能与v2相互作用的烟叶(Nicotiana benthamiana)蛋白,并对这些与v2相互作用的候选蛋白进行了基因本体(GO)分析。特别是,两个N. benthamiana (Nb)蛋白,Ankyrin repeat domain containing protein (NbANK)和Receptor for Activated C Kinase 1 (NbRACK1),被证实在酵母双杂交(Y2H)和双分子荧光互补(BiFC)中与V2有物理相互作用。与NbRACK1相比,在Y2H实验中,NbANK与V2的结合能力更强,这与使用AlphaFold 3对V2-NbANK和V2-NbRACK1复合物的结构预测一致。利用pTRV载体进行的病毒诱导基因沉默(VIGS)实验表明,NbANK的沉默显著增加了benthamiana中CYVMV的丰度,但并未导致致病性增强。总之,我们的蛋白质组学分析确定了植物中特定的CYVMV V2相互作用因子,并以NbANK为例展示了它们在CYVMV繁殖中的关键作用。
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引用次数: 0
Novel circoviruses identified in short-finned pilot whale and orca from the North Atlantic Ocean 在北大西洋短鳍领航鲸和逆戟鲸中发现的新型环状病毒。
IF 2.4 3区 医学 Q3 VIROLOGY Pub Date : 2025-12-05 DOI: 10.1016/j.virol.2025.110768
Matthew D. De Koch , Simona Kraberger , Russell Fielding , Kendal Smith , Kelsie Schiavone , Katharine R. Hall , Vincent S. Reid , Diallo Boyea , Emma L. Smith , Kara Schmidlin , Rafaela S. Fontenele , Darren P. Martin , Mart Krupovic , Arvind Varsani
The family Circoviridae comprises viruses with small single-stranded DNA genomes that are known to infect various animals, resulting in considerable morbidity and mortality in some hosts. Circoviruses have been recently identified through metagenomic sequencing in diverse terrestrial vertebrate species, but their distribution and diversity in marine vertebrates remains underexplored. Here, we use high-throughput sequencing (HTS) to identify circoviruses from archived tissue samples of delphinids (order Artiodactyla, infraorder Cetacea, family Delphinidae). Based on the HTS data, we designed specific abutting primer pairs to recover seven complete circovirus genomes from individual delphinid hosts, namely, the short-finned pilot whale (Globicephala macrorhynchus, n = 5) and the orca (Orcinus orca, n = 2). The circoviruses from the two delphinid species share <65.4 % genome-wide pairwise nucleotide identity with all classified circovirus representative sequences and 66 % amongst themselves. Accordingly, these viruses, which we have named shofin circovirus and orcin circovirus, respectively, represent two novel species. This report also marks the first detection of cetacean circoviruses in the North Atlantic Ocean (near St. Vincent, Caribbean). Notably, analysis of the capsid protein sequences and structures of the delphinid circoviruses revealed notable elaborations within the surface exposed loops that have been previously shown to be a major antigenic epitope in porcine circovirus 2. Collectively, the delphinid circovirus genomes expand the known diversity of circoviruses of marine vertebrates and suggest similar evolutionary pressures exerted by the immune systems of cetacean and suina hosts, both members of the order Artiodactyla.
圆环病毒科包括具有小单链DNA基因组的病毒,已知可感染各种动物,在某些宿主中导致相当高的发病率和死亡率。最近,人们通过宏基因组测序在多种陆生脊椎动物中发现了圆环病毒,但它们在海洋脊椎动物中的分布和多样性仍未得到充分探索。本研究采用高通量测序(HTS)技术,从存档的海豚科(蹄甲目、鲸目、海豚科)组织样本中鉴定环状病毒。基于HTS数据,我们设计了特异性的连接引物对,从短鳍领港鲸(Globicephala macrorhynchus, n = 5)和虎鲸(Orcinus orca, n = 2)个体海豚宿主中恢复7个完整的环状病毒基因组。来自这两种海豚的圆环病毒是相同的
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