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Modeling of mixed infection with Zika and West Nile viruses (Flaviviridae: Orthoflavivirus: Orthoflavivirus zikaense, Orthoflavivirus nilense) in vitro and in vivo. 寨卡病毒和西尼罗病毒(黄病毒科:正黄病毒:正黄病毒Zika - kaense,正黄病毒nilense)在体外和体内混合感染的建模。
Q3 Medicine Pub Date : 2025-09-16 DOI: 10.36233/0507-4088-324
V A Svyatchenko, E V Protopopova, S S Legostaev, T P Mikryukova, A P Agafonov, V B Loktev

Introduction: Mosquito-borne human diseases caused by Zika virus and West Nile virus (WNV) are widespread across multiple continents and cause major outbreaks. Their ranges overlap and the possibility of mixed infections is obvious. The information of such mixed infections is limited. The aim of the study is to investigate the features of mixed infection of WNV and Zika virus in vitro and in vivo in order to assess their possible interference and/or enhancement of viral infection.

Materials and methods: The study used West Nile virus and Zika virus strains Vlg27924 and MR766, respectively. The infectious activity of viruses during mono- and co-infection was determined on Vero E6 cell culture using RT-PCR, as well as on BALB/c mice using various administration schemes.

Results: In vitro studies of co-infection with WNV and Zika virus showed that co-infection leads to interference, with the degree of competitive inhibition of replication being more pronounced for Zika virus, reaching 1000 times or more when compared to mono-infection. During simultaneous infection in mice, Zika virus does not affect the development of lethal infection caused by WNV. However, preliminary (4 and 20 days) infection with a sublethal dose of Zika virus reliably protects animals from subsequent administration of 10 and 100 LD50 WNV, respectively. In pre-infected and co-infected animals with Zika virus, the development of WNV-specific viral neutralizing antibodies was recorded in higher titers than in WNV monoinfected animals.

Conclusion: The presence of in vitro interference between the studied orthoflaviviruses was shown, most pronounced in relation to the Zika virus. No significant effect was observed with simultaneous co-infection in vivo. However, pre-infection of mice with Zika virus provides protection to animals from lethal WNV infection due to the induction of high levels of antibodies that specifically neutralize its infectious activity.

由寨卡病毒和西尼罗河病毒(WNV)引起的蚊媒人类疾病在多个大陆广泛传播,并引起重大疫情。它们的范围重叠,混合感染的可能性很明显。关于这种混合感染的信息是有限的。本研究的目的是研究西尼罗河病毒和寨卡病毒在体外和体内混合感染的特点,以评估它们可能干扰和/或增强病毒感染。材料与方法:采用西尼罗病毒Vlg27924株和寨卡病毒MR766株进行研究。在Vero E6细胞培养和不同给药方案的BALB/c小鼠上,采用RT-PCR测定了病毒在单感染和共感染期间的感染活性。结果:西尼罗河病毒和寨卡病毒共感染的体外研究表明,共感染导致干扰,寨卡病毒对复制的竞争性抑制程度更为明显,与单感染相比可达到1000倍以上。在小鼠同时感染期间,寨卡病毒不影响由西尼罗河病毒引起的致命感染的发展。然而,亚致死剂量寨卡病毒的初步感染(4天和20天)可可靠地保护动物免受随后分别给予10和100 LD50西尼罗河病毒的感染。在寨卡病毒预感染和合并感染的动物中,记录到西尼罗河病毒特异性病毒中和抗体的产生,其滴度高于西尼罗河病毒单感染动物。结论:所研究的正黄病毒之间存在体外干扰,最明显的是与寨卡病毒有关。体内同时共感染未观察到显著影响。然而,由于诱导高水平抗体特异性中和其感染活性,预先感染寨卡病毒的小鼠可保护动物免受致命的西尼罗河病毒感染。
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引用次数: 0
Vpr, accessory protein of human immunodeficiency virus type 1 (Retroviridae: Orthoretrovirinae: Lentivirus: Human immunodeficiency virus-1): features of genetic variants of the virus circulating in the Moscow region in 2019-2020. 人类免疫缺陷病毒1型(逆转录病毒科:正转录病毒科:慢病毒:人类免疫缺陷病毒1型)的辅助蛋白Vpr: 2019-2020年莫斯科地区流行的病毒遗传变异特征
Q3 Medicine Pub Date : 2025-09-16 DOI: 10.36233/0507-4088-296
A I Kuznetsova, A A Antonova, E A Makeeva, K V Kim, I M Munchak, E N Mezhenskaya, E A Orlova-Morozova, A Y Pronin, A G Prilipov, O V Galzitskaya

Introduction: Vpr is a multifunctional auxiliary HIV-1 protein. Oligomerisation is a prerequisite for the entry of Vpr into the virion and its subsequent participation in the early stages of HIV-infection. To date, natural amino acid substitutions in Vpr associated with disease progression were identified; the possibility of creating therapeutics based on Vpr is being considered. The aim of the study is to investigate Vpr features in the most common genetic variants of HIV-1 circulating in the Moscow region in 2019-2020.

Materials and methods: HIV-1 samples obtained from 231 patients of the AIDS Prevention and Control Center in the period 2019-2020 were studied according to the scheme: proviral DNA extraction, amplification of the vpr gene, sequencing, and data analysis. Consensus Vpr sequences of the most common genetic variants in Russia and their spatial structures, variability of Vpr variants of HIV-1 sub-subtype A6 in patients with different stages of the disease were studied.

Results: Features of Vpr protein in different genetic variants of HIV-1 could influence the formation of their oligomeric forms. No sites with statistically significant differences in the frequency of amino acid substitutions were identified in patients with different stages of disease.

Conclusion: Vpr protein of HIV-1 genetic variants circulating in Russia may have differences in functional properties. Vpr-A6 variants had low variability in patients with different stages of the disease, and therefore Vpr-A6 can be considered as a target for the development of therapeutic agents.

Vpr是一种多功能的HIV-1辅助蛋白。寡聚化是Vpr进入病毒粒子并随后参与hiv感染早期阶段的先决条件。迄今为止,已确定Vpr中与疾病进展相关的天然氨基酸替换;正在考虑基于Vpr创造治疗方法的可能性。该研究的目的是调查2019-2020年莫斯科地区流行的HIV-1最常见遗传变异的Vpr特征。材料与方法:选取2019-2020年艾滋病预防控制中心231例患者的HIV-1样本,按照原病毒DNA提取、vpr基因扩增、测序、数据分析等方案进行研究。研究了俄罗斯最常见遗传变异的共识Vpr序列及其空间结构,以及HIV-1亚型A6不同阶段患者Vpr变异的变异性。结果:不同HIV-1基因变异中Vpr蛋白的特征可能影响其寡聚体的形成。在不同疾病阶段的患者中,没有发现氨基酸替换频率有统计学意义差异的位点。结论:俄罗斯流行的HIV-1基因变异Vpr蛋白可能在功能特性上存在差异。Vpr-A6变异在不同疾病阶段的患者中具有较低的变异性,因此可以考虑将Vpr-A6作为开发治疗剂的靶点。
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引用次数: 0
[Endothelial protective properties of sacubitril-valsartan and drotaverine in influenza A(H1N1)pdm09 virus infection (Orthomyxoviridae: Alphainfluenzavirus: influenza A virus)]. [沙比特-缬沙坦和氯他弗林对甲型H1N1流感病毒感染(正粘病毒科:甲型流感病毒)的内皮保护作用]。
Q3 Medicine Pub Date : 2025-09-16 DOI: 10.36233/0507-4088-235
V A Marchenko, I A Zelinskaya, D V Mukhametdinova, Y G Toropova, M M Galagudza, I N Zhilinskaya

Introduction: Severe influenza is characterized by damage and morphofunctional changes of the endothelium of blood vessels, which contributes to the development of hemorrhagic syndrome and can cause endothelial dysfunction. To optimize the pathogenetic therapy of influenza infection, a screening of medications with endothelial protective properties was carried out.

Aim: The aim of the study was to evaluate the endothelial protective properties of sacubitril/valsartan and drotaverine in influenza A(H1N1)pdm09 virus infection.

Materials and methods: The study was conducted on Wistar rats, which received sacubitril/valsartan and drotaverine (in treatment and prophylactic regimen) followed by intransal infection with influenza A/Saint-Petersburg/48/16 (H1N1)pdm09 virus. Rats without drug administration were included in the control group; rats received no medications followed by influenza virus infection - in challenge control group. The virus infectious activity was determined in pulmonary and mesenteric tissues. Vascular endothelium damage in lungs was assessed by three parameters (desquamation, morphological and dystrophic changes). Endothelial nitric oxide synthase (eNOS) expression level in endothelium of mesenteric blood vessels was determined as well as mesenteric arteries vasomotor activity.

Results: Drotaverine reduces the severity of histopathological changes in the pulmonary vascular endothelium; increases the maximal response of mesenteric blood vessels to acetylcholine compared to the infection control group; normalizes eNOS expression levels. Sacubitril/valsartan reduces the severity of desquamation in the pulmonary vascular endothelium; normalizes the response of mesenteric blood vessels to acetylcholine, while eNOS expression is decreased.

Conclusions: Drotaverine possesses more significant endothelial protective properties than sacubitril/valsartan when used in a treatment and prophylactic regimen in rats infected with influenza A(H1N1)pdm09 virus.

简介:重症流感以血管内皮的损伤和形态功能改变为特征,有助于出血综合征的发展,并可引起内皮功能障碍。为了优化流感感染的致病治疗,筛选了具有内皮保护作用的药物。目的:本研究的目的是评价苏比里尔/缬沙坦和氯他弗林对甲型H1N1流感病毒pdm09感染的内皮保护作用。材料与方法:采用Wistar大鼠为研究对象,采用沙比利/缬沙坦和氯他弗林(治疗和预防方案),经呼吸道感染甲型流感/圣彼得堡/48/16 (H1N1)pdm09病毒。未给药大鼠为对照组;流感病毒感染挑战对照组大鼠不接受任何药物治疗。在肺和肠系膜组织中测定病毒的感染活性。采用脱屑、形态学和营养不良三个指标评价肺血管内皮损伤。测定肠系膜血管内皮内皮一氧化氮合酶(eNOS)表达水平及肠系膜动脉血管舒缩活性。结果:氯他弗林可减轻肺血管内皮组织病理改变的严重程度;与感染对照组相比,增加肠系膜血管对乙酰胆碱的最大反应;使eNOS表达水平正常化。Sacubitril/缬沙坦减轻肺血管内皮脱屑的严重程度;使肠系膜血管对乙酰胆碱的反应正常化,而eNOS表达降低。结论:在a (H1N1)pdm09病毒感染大鼠的治疗和预防方案中,与沙比利/缬沙坦相比,氯他弗林具有更显著的内皮保护特性。
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引用次数: 0
[The results of certification of Pharmacopoeial standard for smallpox vaccine]. 【天花疫苗药典标准认证结果】。
Q3 Medicine Pub Date : 2025-09-16 DOI: 10.36233/0507-4088-333
A V Muhacheva, E V Baranova, M P Bogyantseva, E A Nechaeva, M P Smolina, K A Sarkisyan, S S Jandimirova, E A Shubina

Introduction: Pharmacopoeial standard of activity, specificity and necrotic activity is used in testing of for smallpox vaccines. As a part of standard certification, an opportunity of using Pharmacopoeial standard for smallpox vaccine on new cell culture method (in vitro) for testing a new generation of smallpox vaccines was also defined. The aim - certification of the Pharmacopoeial standard for smallpox vaccine to the main certified characteristics and defining an opportunity for using Pharmacopoeial standard for smallpox vaccine on new cell culture method (in vitro).

Materials and methods: Pharmacopoeial standard for smallpox vaccine (FSO 3.2.00113, series 130406) and pharmacopoeial biological methods described in the State Pharmacopoeia of the Russian Federation (S.Ph), the monograph 3.3.1.0033.15 Smallpox vaccine live were used in the study. For cell culture method, the technique from State Research Centre of Virology and Biotechnology «Vector» of the Federal Service for Surveillance in Consumer Rights Protection and Human Well-being, Novosibirsk Region, Koltsovo, Russian Federation was used. Statistical data were evaluated using Microsoft Excel software.

Results: The Pharmacopoeial standard for smallpox vaccine (FSO 3.2.00113) was certified. The possibility of using a new method of determining specific activity, specificity (identification) using the culture method was confirmed.

Conclusion: Along with the confirmation of certified characteristics, the possibility of using a new methodology for determining specific activity, specificity (identification) using the culture method was confirmed, and the main acceptance criteria were determined.

药典标准的活性、特异性和坏死活性用于天花疫苗的检测。作为标准认证的一部分,还确定了在新的体外细胞培养方法上使用天花疫苗药典标准测试新一代天花疫苗的机会。目的-对天花疫苗的药典标准进行主要认证特征的认证,并确定在新的细胞培养方法(体外)上使用天花疫苗药典标准的机会。材料和方法:采用天花疫苗药典标准(FSO 3.2.00113,系列130406)和俄罗斯联邦国家药典(S.Ph)描述的药典生物学方法,专著3.3.1.0033.15天花活疫苗。细胞培养方法采用俄罗斯联邦科尔佐沃新西伯利亚地区消费者权益保护和人类福祉联邦监督局病毒学和生物技术“载体”国家研究中心的技术。统计数据采用Microsoft Excel软件进行评估。结果:通过了天花疫苗药典标准(FSO 3.2.00113)的认证。确定了利用培养法测定特异性(鉴定)的新方法测定比活性的可能性。结论:随着认证特性的确定,确定了采用培养法测定比活度、特异性(鉴定)的新方法的可能性,并确定了主要验收标准。
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引用次数: 0
Zika virus in the shadows: an underrecognized contributor to Nigeria's febrile disease landscape. 阴影中的寨卡病毒:尼日利亚发热疾病格局的一个未被认识的贡献者。
Q3 Medicine Pub Date : 2025-09-16 DOI: 10.36233/0507-4088-328
V I Agbajelola, F A Oluwadare, M M Hamman, A M Lateef

Background: Zika virus (Orthoflavivirus zikaense), a mosquito-borne virus in the family Flaviviridae and genus Orthoflavivirus, has garnered international attention due to its neurological and congenital impacts. Although endemic to Africa, its presence in Nigeria remains poorly understood and often overshadowed by other febrile illnesses such as malaria and dengue. This review synthesizes peer-reviewed literature published between 2015 and 2025 to explore the epidemiology, diagnostic challenges, and public health implications of ZIKV in Nigeria.

Materials and methods: A narrative synthesis of studies reporting ZIKV infection in Nigeria was conducted using targeted searches of PubMed, Scopus, Web of Science, and African Journals Online. Eligible studies included peer-reviewed articles in English reporting serological or molecular data from human or vector populations.

Results: Evidence from eleven studies across ten states shows seroprevalence of ZIKV ranging from 1.4% to over 50%, particularly among pregnant women and febrile patients. Diagnostic gaps, including symptom overlap and serological cross-reactivity, contribute to underreporting. Co-endemicity with other arboviruses and limited surveillance further obscure ZIKV's public health impact.

Conclusion: ZIKV likely circulates silently in Nigeria, sustained by ecological and infrastructural factors. Fragmented vector control, inadequate diagnostics, and lack of integrated arboviral surveillance hinder timely recognition. Lessons from other Aedes-borne viruses should inform a more unified and proactive national strategy.

背景:寨卡病毒(正黄病毒Zika kaense)是一种蚊媒病毒,属于正黄病毒科和属,因其对神经系统和先天性的影响而引起国际关注。尽管它是非洲的地方病,但人们对它在尼日利亚的存在知之甚少,而且常常被疟疾和登革热等其他发热性疾病所掩盖。本综述综合了2015年至2025年间发表的同行评议文献,以探讨尼日利亚寨卡病毒的流行病学、诊断挑战和公共卫生影响。材料和方法:利用PubMed、Scopus、Web of Science和African Journals Online的目标搜索,对报道尼日利亚寨卡病毒感染的研究进行了叙述性综合。符合条件的研究包括同行评议的英文文章,报告了人类或病媒群体的血清学或分子数据。结果:来自10个州的11项研究的证据表明,寨卡病毒的血清阳性率从1.4%到50%以上不等,特别是在孕妇和发热患者中。诊断差距,包括症状重叠和血清学交叉反应性,导致漏报。寨卡病毒与其他虫媒病毒的共同流行以及监测的有限进一步模糊了寨卡病毒对公共卫生的影响。结论:寨卡病毒可能在尼日利亚悄无声息地传播,受到生态和基础设施因素的支持。分散的病媒控制、不充分的诊断和缺乏综合的虫媒病毒监测阻碍了及时识别。从其他伊蚊传播的病毒中吸取的教训应当为更加统一和积极主动的国家战略提供信息。
{"title":"Zika virus in the shadows: an underrecognized contributor to Nigeria's febrile disease landscape.","authors":"V I Agbajelola, F A Oluwadare, M M Hamman, A M Lateef","doi":"10.36233/0507-4088-328","DOIUrl":"https://doi.org/10.36233/0507-4088-328","url":null,"abstract":"<p><strong>Background: </strong>Zika virus (<i>Orthoflavivirus zikaense</i>), a mosquito-borne virus in the family Flaviviridae and genus <i>Orthoflavivirus</i>, has garnered international attention due to its neurological and congenital impacts. Although endemic to Africa, its presence in Nigeria remains poorly understood and often overshadowed by other febrile illnesses such as malaria and dengue. This review synthesizes peer-reviewed literature published between 2015 and 2025 to explore the epidemiology, diagnostic challenges, and public health implications of ZIKV in Nigeria.</p><p><strong>Materials and methods: </strong>A narrative synthesis of studies reporting ZIKV infection in Nigeria was conducted using targeted searches of PubMed, Scopus, Web of Science, and African Journals Online. Eligible studies included peer-reviewed articles in English reporting serological or molecular data from human or vector populations.</p><p><strong>Results: </strong>Evidence from eleven studies across ten states shows seroprevalence of ZIKV ranging from 1.4% to over 50%, particularly among pregnant women and febrile patients. Diagnostic gaps, including symptom overlap and serological cross-reactivity, contribute to underreporting. Co-endemicity with other arboviruses and limited surveillance further obscure ZIKV's public health impact.</p><p><strong>Conclusion: </strong>ZIKV likely circulates silently in Nigeria, sustained by ecological and infrastructural factors. Fragmented vector control, inadequate diagnostics, and lack of integrated arboviral surveillance hinder timely recognition. Lessons from other Aedes-borne viruses should inform a more unified and proactive national strategy.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"70 4","pages":"317-323"},"PeriodicalIF":0.0,"publicationDate":"2025-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145378944","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic characteristics of the isolate of human adenovirus type 55 (Adenoviridae: Mastadenovirus) isolated in Moscow in 2022. 2022年莫斯科分离的55型人腺病毒(腺病毒科:乳突腺病毒)分离物的遗传特征。
Q3 Medicine Pub Date : 2025-09-12 DOI: 10.36233/0507-4088-297
D A Shein, N N Ryzhova, M S Kunda, E I Ermolova, T A Ozharovskaia, O Popova, N A Nikitenko, K G Krasnoslobodtsev, E I Burtseva, O V Zubkova, O L Voronina, A L Gintsburg

Introduction: Adenovirus infection occurs globally in the form of sporadic cases and isolated outbreaks. Human adenovirus type 55 (HAdV-55), endemic in China and South Korea, causes acute respiratory viral infections (ARVI) of varying severity, both among the civilian population and in military units in different countries of the world. Genomic research facilitates reliable identification of HAdV-55. The aim of this study was to identify HAdV isolated in Moscow in 2022, as well as to conduct whole-genome sequencing and comparative genomic research.

Materials and methods: HAdV-55 was isolated from a sample of a patient hospitalized with pneumonia and analyzed using restriction fragment length polymorphism analysis and whole-genome sequencing. Bioinformatics comparative analysis was performed on a sample of sequences of 83 isolates.

Results: The whole-genome sequencing of first isolated in Russia HAdV-55 was conducted. The sequence of isolate SCV3008:Ad55 was deposited in GenBank (Accession Number PQ641625). Unique mutations in the SCV3008:Ad55 genome were identified, one of which resulted in a conservative T29A substitution in the penton that did not affect its functions. Phylogenetic analysis showed clustering of SCV3008:Ad55 with isolates of clade II, which included representatives of 7 countries on different continents, indicating a wide distribution of HAdV-55. Isolates from endemic regions of China and South Korea formed separate clades. The study of microsatellite length polymorphism in untranslated regions of the genome became an additional tool for distinguishing closely related genomes.

Conclusion: The obtained genomic information laid the foundation for further monitoring for HAdV-55 in Russia and demonstrated the informativeness and significance of whole-genome studies for monitoring adenoviruses. The development and implementation of genotyping methods aimed at detecting HAdV-55 and other clinically relevant genotypes will significantly improve the effectiveness of the diagnosis of adenovirus infections with the threat of developing bronchopneumonia.

腺病毒感染以散发病例和孤立暴发的形式在全球范围内发生。人类腺病毒55型(HAdV-55)在中国和韩国流行,在世界不同国家的平民和军事单位中引起不同程度的急性呼吸道病毒感染(ARVI)。基因组研究促进了HAdV-55的可靠鉴定。本研究的目的是鉴定2022年在莫斯科分离的hav,并进行全基因组测序和比较基因组研究。材料和方法:从肺炎住院患者样本中分离出HAdV-55,采用限制性内切片段长度多态性分析和全基因组测序进行分析。对83株分离株的序列进行了生物信息学比较分析。结果:对俄罗斯首次分离到的HAdV-55进行了全基因组测序。分离物scv300r008:Ad55序列存入GenBank(登录号PQ641625)。在scv8:Ad55基因组中发现了独特的突变,其中一个突变导致基因上保守的T29A替代,但不影响其功能。系统发育分析显示,scv8:Ad55与II支分离株聚类,其中包括来自不同大陆7个国家的代表,表明HAdV-55分布广泛。来自中国和韩国流行地区的分离株形成了单独的分支。基因组非翻译区微卫星长度多态性的研究成为区分密切相关基因组的又一工具。结论:获得的基因组信息为俄罗斯HAdV-55的进一步监测奠定了基础,显示了全基因组研究对腺病毒监测的信息量和意义。旨在检测HAdV-55及其他临床相关基因型的基因分型方法的开发和实施,将显著提高对有发展为支气管肺炎威胁的腺病毒感染的诊断有效性。
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引用次数: 0
Modern approaches to the construction and use of recombinant viruses. 构建和使用重组病毒的现代方法。
Q3 Medicine Pub Date : 2025-08-30 DOI: 10.36233/0507-4088-323
P V Prokhorova, N N Vlasova, A G Yuzhakov, A M Gulyukin

The review describes certain viral vectors and considers various methods for constructing recombinant viruses with special attention paid to the homologous recombination and CRISPR/Cas9 system, and also describes the capabilities of using various cloning vectors (different plasmids, BAC etc.). The review also presents a comparative analysis of the effectiveness and safety of using various viral vectors, both for creating recombinant vaccines and for obtaining oncolytic viruses, as well as medicines for gene therapy.

本文介绍了一些病毒载体,考虑了构建重组病毒的各种方法,重点介绍了同源重组和CRISPR/Cas9系统,并介绍了使用各种克隆载体(不同质粒、BAC等)的能力。本综述还对利用各种病毒载体制造重组疫苗和获得溶瘤病毒以及基因治疗药物的有效性和安全性进行了比较分析。
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引用次数: 0
[Epidemic season 2023-2024: the palette of ARVI pathogens in some territories of the Russian Federation and WHO regions]. [2023-2024年流行季节:俄罗斯联邦部分领土和世卫组织区域的ARVI病原体调色]。
Q3 Medicine Pub Date : 2025-07-21 DOI: 10.36233/0507-4088-302
E I Burtseva, N V Breslav, E A Mukasheva, K G Krasnoslobodtsev, E S Kirillova, S V Trushakova, I A Komarova, E L Feodoritova, A D Panova, L B Kisteneva, I N Khlopova, I S Kruzhkova, A S Krepkaia, E O Morozova, A V Ignatieva, A B Komissarov, I N Tyurin, A A Samkov, N A Antipjat

The purpose of this work was to determine the characteristics of the circulation of acute respiratory viral infection (ARVI) pathogens during the epidemic season of 2023-2024 in the WHO regions and Russian Federation.

Materials and methods: The article uses virological, immunological, and statistical methods, analytical material from the WHO website, to assess the circulation of ARVI pathogens in the Russian Federation and WHO regions.

Results and discussion: The detection rate of positive samples in clinical materials was as follows: influenza viruses - 7.7%, ARVI - 17.1% and SARS-CoV-2 - 6.5%. According to antigenic and molecular genetic properties, the population of the dominant subtype of the influenza A(H3N2) virus was heterogeneous and differed from the vaccine strain. The favorable sensitivity profile of epidemic strains to drugs with antineuraminidase activity (oseltamivir and zanamivir) and cap-dependent endonuclease inhibitor (baloxavir marboxil) was preserved. There was a tendency to increase the activity of respiratory pathogens such as HPIV, HAdV, HRsV, HRV, HCoV and HMPV. WHO experts have developed recommendations on the composition of influenza vaccines for the countries of the Northern and the Southern hemispheres with the replacement of the component of the influenza A(H3N2) virus: A/Darwin/9/2021 with A/Thailand/8/2022 and А/Croatia/13601RV/2023 accordingly. Cases of human infection with avian and swine influenza viruses continue to be registered.

Conclusion: Against the background of a relatively low circulation of new SARS-CoV-2 variants in the 2023-2024 season, epidemic activity of influenza viruses was recorded in the countries of the Northern hemisphere at the traditional time. Globally, its onset was associated with the influenza A(H3N2) virus, followed by an increase in the activity of the influenza A(H1N1) pdm09 virus and influenza B. As in previous seasons, differences in the proportion of influenza viruses in WHO regions, including cities of the Russian Federation, were traced.

这项工作的目的是确定2023-2024年世卫组织区域和俄罗斯联邦流行季节急性呼吸道病毒感染(ARVI)病原体的传播特征。材料和方法:本文使用病毒学、免疫学和统计学方法以及来自世卫组织网站的分析材料来评估ARVI病原体在俄罗斯联邦和世卫组织区域的传播情况。结果与讨论:临床资料中阳性标本检出率为:流感病毒7.7%,ARVI 17.1%, SARS-CoV-2 6.5%。根据抗原和分子遗传学特性,甲型流感(H3N2)病毒优势亚型的群体具有异质性,与疫苗株不同。流行菌株对具有抗尿氨酶活性的药物(奥司他韦和扎那米韦)和帽依赖性核酸内切酶抑制剂(巴洛韦马博西)保持了良好的敏感性。HPIV、hav、HRsV、HRV、HCoV和HMPV等呼吸道病原体的活性有增加的趋势。世卫组织专家就北半球和南半球国家流感疫苗的成分提出了建议,将甲型(H3N2)流感病毒的成分:A/达尔文/9/2021替换为A/泰国/8/2022和А/克罗地亚/13601RV/2023。人类感染禽流感和猪流感病毒的个案继续录得。结论:在2023-2024年季节SARS-CoV-2新变体传播相对较低的背景下,北半球国家流感病毒流行活动处于传统时间。在全球范围内,其发病与甲型(H3N2)流感病毒有关,随后是甲型(H1N1) pdm09流感病毒和乙型流感病毒活性的增加。与前几个流感季节一样,在世卫组织各区域,包括俄罗斯联邦各城市,发现了流感病毒比例的差异。
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引用次数: 0
[Impact of COVID-19 pandemic on the etiology and severity of respiratory viral infections in children]. [新冠肺炎大流行对儿童呼吸道病毒感染病因及严重程度的影响]。
Q3 Medicine Pub Date : 2025-07-21 DOI: 10.36233/0507-4088-313
A А Sominina, D M Danilenko, A B Komissarov, A V Fadeev, K S Komissarova, M M Pisareva, T D Musayeva, V A Eder, T P Levanyuk, K A Stolyarov, V Z Krivitskaya, E R Petrova, O I Afanasyeva, V S Timonina, E V Obraztsova, E G Golovacheva, E A Dondurey, E V Lelenkova, O G Kurskaya, A M Shestopalov, D A Lioznov

Objective: To analyze the age-related characteristics of the contribution of influenza viruses, RSV, SARS-CoV-2, other pathogens to the development of severe acute respiratory infections (SARI) in children with an assessment of the disease severity depending on its etiology and epidemic period.

Materials and methods: SARI monitoring was carried out over six consecutive epidemic seasons, starting from 2018-2019 in 9 infectious hospitals of three cities of Russia with an assessment of the disease severity depending on its etiology.

Results: Among all hospitalized children, the proportion of children hospitalized with laboratory-confirmed influenza from 2018 to 2020 ranged from 25.7% to 44.7%, and for RSV infection from 25.7% to 26.8%. However, during the peak of the pandemic, these rates dropped significantly to 0.3% and 1.7%, respectively. In the subsequent three seasons (2021-2024), laboratory-confirmed influenza among hospitalized children was registered in 4.5-20.2% of cases, while RSV infection was identified in 13.4-24.1% of cases, accompanied by a shift in viral subgroups. RSV infections were most severe during the 2022-2023 season, presenting in some cases with hyperthermia, hypoxia, dyspnea, and altered consciousness. Among hospitalized children, the proportion with COVID-19 was relatively low in 2020-2021 (0.8-2.4%) but increased significantly to 10.6%-13.6% following the emergence of the Omicron variant in 2022, before decreasing again in subsequent years. The main genetic lineages of SARS-CoV-2 circulating in the Russian Federation are presented.

Conclusion: Influenza and RSV viruses were predominant among viral pathogens identified in hospitalized children aged ≤ 2 years. COVID-19 cases among children were relatively rare and generally less severe compared to RSV and rhinovirus infections.

目的:分析流感病毒、RSV、SARS-CoV-2等病原体对儿童严重急性呼吸道感染(SARI)发病的年龄相关特征,并根据病因和流行期对其严重程度进行评估。材料和方法:自2018-2019年开始,在俄罗斯3个城市的9家感染医院连续6个流行季节进行了SARI监测,并根据病因评估疾病严重程度。结果:在所有住院儿童中,2018 - 2020年实验室确诊流感住院儿童比例为25.7% ~ 44.7%,RSV感染住院儿童比例为25.7% ~ 26.8%。然而,在大流行高峰期,这些比率分别大幅下降至0.3%和1.7%。在随后的三个季节(2021-2024年),住院儿童中实验室确诊的流感病例占4.5-20.2%,而呼吸道合胞病毒感染病例占13.4-24.1%,并伴有病毒亚群的变化。呼吸道合胞病毒感染在2022-2023季节最为严重,在一些病例中表现为高热、缺氧、呼吸困难和意识改变。在住院儿童中,2020-2021年感染COVID-19的比例相对较低(0.8-2.4%),但在2022年欧米克隆变异出现后,这一比例显著上升至10.6%-13.6%,随后几年再次下降。介绍了在俄罗斯联邦流行的SARS-CoV-2的主要遗传谱系。结论:2岁以下住院儿童病毒病原体以流感病毒和RSV病毒为主。与呼吸道合胞病毒和鼻病毒感染相比,儿童中的COVID-19病例相对罕见,通常不那么严重。
{"title":"[Impact of COVID-19 pandemic on the etiology and severity of respiratory viral infections in children].","authors":"A А Sominina, D M Danilenko, A B Komissarov, A V Fadeev, K S Komissarova, M M Pisareva, T D Musayeva, V A Eder, T P Levanyuk, K A Stolyarov, V Z Krivitskaya, E R Petrova, O I Afanasyeva, V S Timonina, E V Obraztsova, E G Golovacheva, E A Dondurey, E V Lelenkova, O G Kurskaya, A M Shestopalov, D A Lioznov","doi":"10.36233/0507-4088-313","DOIUrl":"https://doi.org/10.36233/0507-4088-313","url":null,"abstract":"<p><strong>Objective: </strong>To analyze the age-related characteristics of the contribution of influenza viruses, RSV, SARS-CoV-2, other pathogens to the development of severe acute respiratory infections (SARI) in children with an assessment of the disease severity depending on its etiology and epidemic period.</p><p><strong>Materials and methods: </strong>SARI monitoring was carried out over six consecutive epidemic seasons, starting from 2018-2019 in 9 infectious hospitals of three cities of Russia with an assessment of the disease severity depending on its etiology.</p><p><strong>Results: </strong>Among all hospitalized children, the proportion of children hospitalized with laboratory-confirmed influenza from 2018 to 2020 ranged from 25.7% to 44.7%, and for RSV infection from 25.7% to 26.8%. However, during the peak of the pandemic, these rates dropped significantly to 0.3% and 1.7%, respectively. In the subsequent three seasons (2021-2024), laboratory-confirmed influenza among hospitalized children was registered in 4.5-20.2% of cases, while RSV infection was identified in 13.4-24.1% of cases, accompanied by a shift in viral subgroups. RSV infections were most severe during the 2022-2023 season, presenting in some cases with hyperthermia, hypoxia, dyspnea, and altered consciousness. Among hospitalized children, the proportion with COVID-19 was relatively low in 2020-2021 (0.8-2.4%) but increased significantly to 10.6%-13.6% following the emergence of the Omicron variant in 2022, before decreasing again in subsequent years. The main genetic lineages of SARS-CoV-2 circulating in the Russian Federation are presented.</p><p><strong>Conclusion: </strong>Influenza and RSV viruses were predominant among viral pathogens identified in hospitalized children aged ≤ 2 years. COVID-19 cases among children were relatively rare and generally less severe compared to RSV and rhinovirus infections.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"70 3","pages":"254-266"},"PeriodicalIF":0.0,"publicationDate":"2025-07-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145379164","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Bombali virus (Filoviridae: Orthoebolavirus: Orthoebolavirus bombaliense)].
Q3 Medicine Pub Date : 2025-07-21 DOI: 10.36233/0507-4088-310
T E Sizikova, V N Lebedev, S V Borisevich
<p><strong>Introduction: </strong>Members of genus <i>Orthoebolavirus</i> of family Filoviridae cause severe hemorrhagic fever in humans with high fatality rates (up to 90%). The first outbreaks of disease caused by the members of genus <i>Orthoebolavirus</i> were registered in 1976 in Zaire and Sudan. The outbreaks of disease caused by the members of genus Orthoebolavirus occur regularly in Africa. The largest outbreak (for all history of monitoring) happened in Guinea, Liberia, Sierra-Leone in 2013-2016. During this outbreak, the cases of disease importation in non-endemic regions were registered. The foci of circulation of the members of genus <i>Orthoebolavirus</i> (with exception for Reston virus) are situated in moist tropical forests of Central and West Africa. The bats are natural reservoirs for filoviruses, the genomic RNA sequences of the members of genus <i>Orthoebolavirus</i> were isolated from various bat species <i>(Hypsignathus monstrosus</i>, <i>Epomops franqueti</i>, <i>Myonycteris tarquata)</i>. Recently, the new members of Filoviridae family were isolated from several bat species.</p><p><strong>Aims: </strong>The purpose of the presented article is analysis of the properties of the new member of genus <i>Orthoebolavirus</i> of family Filoviridae - Bombali virus (<i>Orthoebolavirus bombaliense</i>).</p><p><strong>Material and methods: </strong>The paper presents analysis of data published in English language scientific publications in citation databases RSCI, PubMed.The research method is analytical. The literature for the period from 2005 to 2023 was analyzed.</p><p><strong>Results: </strong>Bombali virus was first isolated in Guinea in August 2018 from bats<i> Mops condylurus</i>. When comparing the concentration of the Bombali virus in the organs of infected bats, the highest level of accumulation was detected in the lungs which indirectly indicates the possibility of aerosol infection of<i> Mops condylurus. </i>Later RNA of Bombali virus was identified by reverse transcription-polymerase chain reaction in bats <i>Chaerephon pumilus</i> in Sierra-Leone, but not in other species of fruit-eating and insectivores bats. Nucleotide sequence of genomic RNA of Bombali virus from samples collected in Guinea had 99.3% homology to that from samples collected in Sierra-Leone, and 98.3% homology to that from samples collected in Kenya. Considering that bats<i> Mops condylurus</i> as many other species of insectivores bats cannot travel long distances, this is indirect evidence for the wide distribution of the Bombali virus on the African continent. Despite the fact that cases of human disease caused by Bombali virus have not been identified to date, glycoprotein of this virus (as glycoprotein of filoviruses pathogenic for humans) has affinity to the C1 receptor of Neumann-Pieck protein of human cells.</p><p><strong>Conclusion: </strong>The study of the molecular biological characteristics of the Bombali virus, as well as other recently d
简介:丝状病毒科正埃博拉病毒属的成员在人类中引起严重的出血热,死亡率高(高达90%)。1976年在扎伊尔和苏丹记录了由正埃博拉病毒属成员引起的第一次疾病暴发。由正埃博拉病毒属成员引起的疾病暴发在非洲经常发生。2013-2016年在几内亚、利比里亚和塞拉利昂发生了(所有监测历史上)最大的疫情。在这次暴发期间,登记了非流行地区的疾病输入病例。正埃博拉病毒属成员(雷斯顿病毒除外)的流行疫源地位于中非和西非潮湿的热带森林。蝙蝠是丝状病毒的天然宿主,从不同种类的蝙蝠(Hypsignathus monstrosus、epoomops franqueti、Myonycteris tarquata)中分离到了正埃博拉病毒属成员的基因组RNA序列。最近,从几种蝙蝠中分离到了丝状病毒科的新成员。目的:分析丝状病毒科正埃博拉病毒属新成员-邦巴利病毒(正埃博拉病毒邦巴利氏)的性质。材料与方法:本文对引文数据库RSCI、PubMed中英文科学出版物发表的数据进行了分析。研究方法是分析性的。分析了2005年至2023年期间的文献。结果:2018年8月在几内亚首次从蝙蝠湿疣中分离到Bombali病毒。在比较受感染蝙蝠器官中邦巴利病毒的浓度时,在肺部检测到最高水平的积累,这间接表明了湿疣莫普斯气溶胶感染的可能性。后来在塞拉利昂的蝙蝠Chaerephon pumilus中通过逆转录聚合酶链反应鉴定了Bombali病毒的RNA,但在其他食果和食虫蝙蝠中未发现。几内亚邦巴利病毒基因组RNA序列与塞拉利昂样本同源性为99.3%,与肯尼亚样本同源性为98.3%。考虑到蝙蝠和许多其他食虫蝙蝠一样不能长途旅行,这是Bombali病毒在非洲大陆广泛分布的间接证据。尽管迄今为止尚未发现由Bombali病毒引起的人类疾病病例,但该病毒的糖蛋白(作为对人类致病的丝状病毒的糖蛋白)与人类细胞Neumann-Pieck蛋白的C1受体具有亲和力。结论:对邦巴利病毒及新近发现的丝状病毒科新代表的分子生物学特性的研究可为鉴定人类致病性分子标志物提供有价值的信息。
{"title":"[Bombali virus (Filoviridae: <i>Orthoebolavirus: Orthoebolavirus bombaliense</i>)].","authors":"T E Sizikova, V N Lebedev, S V Borisevich","doi":"10.36233/0507-4088-310","DOIUrl":"10.36233/0507-4088-310","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Introduction: &lt;/strong&gt;Members of genus &lt;i&gt;Orthoebolavirus&lt;/i&gt; of family Filoviridae cause severe hemorrhagic fever in humans with high fatality rates (up to 90%). The first outbreaks of disease caused by the members of genus &lt;i&gt;Orthoebolavirus&lt;/i&gt; were registered in 1976 in Zaire and Sudan. The outbreaks of disease caused by the members of genus Orthoebolavirus occur regularly in Africa. The largest outbreak (for all history of monitoring) happened in Guinea, Liberia, Sierra-Leone in 2013-2016. During this outbreak, the cases of disease importation in non-endemic regions were registered. The foci of circulation of the members of genus &lt;i&gt;Orthoebolavirus&lt;/i&gt; (with exception for Reston virus) are situated in moist tropical forests of Central and West Africa. The bats are natural reservoirs for filoviruses, the genomic RNA sequences of the members of genus &lt;i&gt;Orthoebolavirus&lt;/i&gt; were isolated from various bat species &lt;i&gt;(Hypsignathus monstrosus&lt;/i&gt;, &lt;i&gt;Epomops franqueti&lt;/i&gt;, &lt;i&gt;Myonycteris tarquata)&lt;/i&gt;. Recently, the new members of Filoviridae family were isolated from several bat species.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Aims: &lt;/strong&gt;The purpose of the presented article is analysis of the properties of the new member of genus &lt;i&gt;Orthoebolavirus&lt;/i&gt; of family Filoviridae - Bombali virus (&lt;i&gt;Orthoebolavirus bombaliense&lt;/i&gt;).&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Material and methods: &lt;/strong&gt;The paper presents analysis of data published in English language scientific publications in citation databases RSCI, PubMed.The research method is analytical. The literature for the period from 2005 to 2023 was analyzed.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;Bombali virus was first isolated in Guinea in August 2018 from bats&lt;i&gt; Mops condylurus&lt;/i&gt;. When comparing the concentration of the Bombali virus in the organs of infected bats, the highest level of accumulation was detected in the lungs which indirectly indicates the possibility of aerosol infection of&lt;i&gt; Mops condylurus. &lt;/i&gt;Later RNA of Bombali virus was identified by reverse transcription-polymerase chain reaction in bats &lt;i&gt;Chaerephon pumilus&lt;/i&gt; in Sierra-Leone, but not in other species of fruit-eating and insectivores bats. Nucleotide sequence of genomic RNA of Bombali virus from samples collected in Guinea had 99.3% homology to that from samples collected in Sierra-Leone, and 98.3% homology to that from samples collected in Kenya. Considering that bats&lt;i&gt; Mops condylurus&lt;/i&gt; as many other species of insectivores bats cannot travel long distances, this is indirect evidence for the wide distribution of the Bombali virus on the African continent. Despite the fact that cases of human disease caused by Bombali virus have not been identified to date, glycoprotein of this virus (as glycoprotein of filoviruses pathogenic for humans) has affinity to the C1 receptor of Neumann-Pieck protein of human cells.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusion: &lt;/strong&gt;The study of the molecular biological characteristics of the Bombali virus, as well as other recently d","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"70 3","pages":"217-223"},"PeriodicalIF":0.0,"publicationDate":"2025-07-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145378994","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Voprosy virusologii
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