A V Mishchenko, V A Mishchenko, M I Gulyukin, A S Oganesyan, S V Alexeyenkova, A D Zaberezhny, A М Gulyukin
The review provides an analysis of literature data on the persistent form of Bovine Viral diarrhea/Mucosal disease (BVD) and is focused on virus and host factors, including those related to immune response, that contribute the persistence of the virus. BVD is a cattle disease widespread throughout the world that causes significant economic damage to dairy and beef cattle. The disease is characterized by a variety of clinical signs, including damage to the digestive and respiratory organs, abortions, stillbirths and other failures of reproductive functions.
{"title":"[Persistent form of bovine viral diarrhea].","authors":"A V Mishchenko, V A Mishchenko, M I Gulyukin, A S Oganesyan, S V Alexeyenkova, A D Zaberezhny, A М Gulyukin","doi":"10.36233/0507-4088-184","DOIUrl":"10.36233/0507-4088-184","url":null,"abstract":"<p><p>The review provides an analysis of literature data on the persistent form of Bovine Viral diarrhea/Mucosal disease (BVD) and is focused on virus and host factors, including those related to immune response, that contribute the persistence of the virus. BVD is a cattle disease widespread throughout the world that causes significant economic damage to dairy and beef cattle. The disease is characterized by a variety of clinical signs, including damage to the digestive and respiratory organs, abortions, stillbirths and other failures of reproductive functions.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 6","pages":"465-478"},"PeriodicalIF":0.0,"publicationDate":"2023-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139058818","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
V S Kichatova, I A Potemkin, F A Asadi Mobarkhan, T D Rumyantseva, S I Semenov, K K Kyuregyan, M I Mikhailov
Introduction: Although domestic pigs and wild boars are the main reservoir of zoonotic hepatitis E virus (HEV) genotypes in temperate countries, the presence of antibodies to HEV (anti-HEV) in the indigenous population of circumpolar territories, i.e. outside the habitat of wild and domestic pigs, indicates the presence of an alternative reservoir of the virus. Reindeer (Rangifer tarandus) may be a potential reservoir for HEV in the polar regions. The purpose of the study was to determine the prevalence of anti-HEV among domestic reindeer in the Republic of Sakha (Yakutia).
Materials and methods: Sera from 497 domestic reindeer from the Oymyakon (n = 425) and Ust-Yansky districts (n = 72) of the Republic of Sakha (Yakutia) were tested for anti-HEV. A commercial ELISA kit DS-ELISA-ANTI-HEV-G (Diagnostic Systems-Stolitsa LLC, Russia) was used for detection of anti-HEV IgG, but a rabbit polyclonal antibody against deer IgG labeled with horseradish peroxidase (KPL, USA) at a dilution of 1 : 100 in phosphate-buffered saline were used instead of the human specific conjugate from the kit.
Results: The average detection rate of anti-HEV in reindeer sera was 15.5% (95% CI: 12.6-19.0%). The detection rate of anti-HEV significantly increased with age, from 3.5% (95% CI: 1.1-9.0%) in calves aged 3-6 months to 25.0% (95% CI: 1.6 -36.5%) in deer aged 2-4 years (p < 0.0001). From this age group, anti-HEV detection rates reached a plateau, not differing significantly between older age groups (p > 0.05). The average anti-HEV detection rate among reindeer 2 years of age and older was 19.0% (95% CI: 15.3-23.4%). There were no statistically significant differences in the frequency of anti-HEV detection between female and male reindeer, both among adult animals and among calves.
Conclusion: The observed anti-HEV detection rates among domestic reindeer in the Republic of Sakha (Yakutia) indicate that infection caused by HEV or an antigenically similar virus is common in these animals. The dynamics of antibody accumulation in the reindeer population indicates that infection apparently occurs during the first two years of life.
导言:虽然家猪和野猪是温带国家人畜共患病戊型肝炎病毒(HEV)基因型的主要贮藏库,但在环北极地区,即野猪和家猪栖息地以外的土著居民中存在 HEV 抗体(anti-HEV),这表明该病毒存在另一个贮藏库。驯鹿(Rangifer tarandus)可能是极地地区潜在的 HEV 病毒库。研究的目的是确定萨哈共和国(雅库特)家养驯鹿中抗 HEV 的流行率:对来自萨哈共和国(雅库特)Oymyakon 区(425 头)和 Ust-Yansky 区(72 头)的 497 头家养驯鹿的血清进行抗 HEV 检测。使用商业 ELISA 试剂盒 DS-ELISA-ANTI-HEV-G(Diagnostic Systems-Stolitsa LLC,俄罗斯)检测抗 HEV IgG,但使用在磷酸盐缓冲盐水中稀释为 1 : 100 的用辣根过氧化物酶标记的鹿 IgG 兔多克隆抗体(KPL,美国),而不是试剂盒中的人类特异性共轭物:驯鹿血清中抗 HEV 的平均检出率为 15.5%(95% CI:12.6-19.0%)。抗 HEV 的检出率随年龄的增长而显著增加,从 3-6 个月的小鹿的 3.5%(95% CI:1.1-9.0%)增加到 2-4 岁的鹿的 25.0%(95% CI:1.6-36.5%)(p < 0.0001)。从这一年龄组开始,抗 HEV 检测率趋于平稳,各年龄组之间差异不大(p > 0.05)。2 岁及以上驯鹿的平均抗逆转录病毒检测率为 19.0%(95% CI:15.3-23.4%)。无论是成年驯鹿还是幼鹿,雌性驯鹿和雄性驯鹿的抗艾滋病毒检测率在统计上没有明显差异:结论:在萨哈共和国(雅库特)家养驯鹿中观察到的抗 HEV 检测率表明,HEV 或抗原相似的病毒感染在这些动物中很常见。驯鹿群体抗体积累的动态变化表明,感染显然发生在驯鹿出生后的头两年。
{"title":"Detection of antibodies to the hepatitis E virus in domestic reindeer (<i>Rangifer tarandus</i>) in the Republic of Sakha (Yakutia).","authors":"V S Kichatova, I A Potemkin, F A Asadi Mobarkhan, T D Rumyantseva, S I Semenov, K K Kyuregyan, M I Mikhailov","doi":"10.36233/0507-4088-206","DOIUrl":"10.36233/0507-4088-206","url":null,"abstract":"<p><strong>Introduction: </strong>Although domestic pigs and wild boars are the main reservoir of zoonotic hepatitis E virus (HEV) genotypes in temperate countries, the presence of antibodies to HEV (anti-HEV) in the indigenous population of circumpolar territories, i.e. outside the habitat of wild and domestic pigs, indicates the presence of an alternative reservoir of the virus. Reindeer (<i>Rangifer tarandus</i>) may be a potential reservoir for HEV in the polar regions. The purpose of the study was to determine the prevalence of anti-HEV among domestic reindeer in the Republic of Sakha (Yakutia).</p><p><strong>Materials and methods: </strong>Sera from 497 domestic reindeer from the Oymyakon (<i>n </i>= 425) and Ust-Yansky districts (<i>n</i> = 72) of the Republic of Sakha (Yakutia) were tested for anti-HEV. A commercial ELISA kit DS-ELISA-ANTI-HEV-G (Diagnostic Systems-Stolitsa LLC, Russia) was used for detection of anti-HEV IgG, but a rabbit polyclonal antibody against deer IgG labeled with horseradish peroxidase (KPL, USA) at a dilution of 1 : 100 in phosphate-buffered saline were used instead of the human specific conjugate from the kit.</p><p><strong>Results: </strong>The average detection rate of anti-HEV in reindeer sera was 15.5% (95% CI: 12.6-19.0%). The detection rate of anti-HEV significantly increased with age, from 3.5% (95% CI: 1.1-9.0%) in calves aged 3-6 months to 25.0% (95% CI: 1.6 -36.5%) in deer aged 2-4 years (<i>p</i> < 0.0001). From this age group, anti-HEV detection rates reached a plateau, not differing significantly between older age groups (<i>p </i>> 0.05). The average anti-HEV detection rate among reindeer 2 years of age and older was 19.0% (95% CI: 15.3-23.4%). There were no statistically significant differences in the frequency of anti-HEV detection between female and male reindeer, both among adult animals and among calves.</p><p><strong>Conclusion: </strong>The observed anti-HEV detection rates among domestic reindeer in the Republic of Sakha (Yakutia) indicate that infection caused by HEV or an antigenically similar virus is common in these animals. The dynamics of antibody accumulation in the reindeer population indicates that infection apparently occurs during the first two years of life.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 6","pages":"549-556"},"PeriodicalIF":0.0,"publicationDate":"2023-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139058821","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
M S Tuyskanova, K D Zhugunissov, M Ozaslan, B S Myrzakhmetova, L B Kutumbetov
Introduction: At the beginning of December 2019, humanity has faced a new problem caused by coronavirus. In Hubei province of central China, epidemic events associated with severe primary viral pneumonia in humans began to develop. The isolated etiological agent was identified as a representative of Coronaviridae family. The global pandemic associated with the new coronavirus infection, acute respiratory syndrome type 2 (Severe acute respiratory syndrome 2, SARS-CoV-2), has become a challenge for humanity.
Objective: In our work, we assessed the replicative ability and pathogenesis of the SARS-CoV-2 virus in hamsters.
Materials and methods: Syrian hamsters (n=16) randomly divided into two groups were used in experiment. The first group was infected intranasally with the SARS-CoV-2 virus, strain SARS-CoV-2/human/KAZ/KZ_Almaty/2020 deposited in GenBank under number MZ379258.1. The second group remained as a control group. Clinical manifestations of the disease in hamsters were observed within 14 days. Samples were collected on days 3, 5, 7, 9, 12, and 14 postinfection. The obtained samples were tested for viral isolation in cell culture, histological examination and analysis of viral RNA by RT-PCR.
Results: SARS-CoV-2 virus isolates showed efficient replication in the lungs of hamsters, causing pathological lung lesions in animals infected intranasally. Clinical manifestations of the disease in hamsters infected with this virus were characterized by a decrease in temperature and body weight, wetness and ruffled fur, and frequent stroking of the nasal planum. High virus titers were observed following the virus isolation in cell cultures from nasal, oral swabs and lungs of animals infected intranasally. Pathological autopsy demonstrated pathological changes in the lungs. Moreover, transmission by airborne droplets has been established when a healthy hamster was kept together with animals infected using the intranasal method.
Conclusion: In conclusion, our study showed that the Syrian hamster model is a useful tool for studying the SARS-CoV-2 pathogenesis, as well as testing vaccine candidates against acute respiratory syndrome type 2.
{"title":"[Clinical symptoms and signs in hamsters during experimental infection with the SARS-CoV-2 virus (Coronaviridae: <i>Betacoronavirus</i>)].","authors":"M S Tuyskanova, K D Zhugunissov, M Ozaslan, B S Myrzakhmetova, L B Kutumbetov","doi":"10.36233/0507-4088-202","DOIUrl":"10.36233/0507-4088-202","url":null,"abstract":"<p><strong>Introduction: </strong>At the beginning of December 2019, humanity has faced a new problem caused by coronavirus. In Hubei province of central China, epidemic events associated with severe primary viral pneumonia in humans began to develop. The isolated etiological agent was identified as a representative of <i>Coronaviridae </i>family. The global pandemic associated with the new coronavirus infection, acute respiratory syndrome type 2 (Severe acute respiratory syndrome 2, SARS-CoV-2), has become a challenge for humanity.</p><p><strong>Objective: </strong>In our work, we assessed the replicative ability and pathogenesis of the SARS-CoV-2 virus in hamsters.</p><p><strong>Materials and methods: </strong>Syrian hamsters (<i>n</i>=16) randomly divided into two groups were used in experiment. The first group was infected intranasally with the SARS-CoV-2 virus, strain SARS-CoV-2/human/KAZ/KZ_Almaty/2020 deposited in GenBank under number MZ379258.1. The second group remained as a control group. Clinical manifestations of the disease in hamsters were observed within 14 days. Samples were collected on days 3, 5, 7, 9, 12, and 14 postinfection. The obtained samples were tested for viral isolation in cell culture, histological examination and analysis of viral RNA by RT-PCR.</p><p><strong>Results: </strong>SARS-CoV-2 virus isolates showed efficient replication in the lungs of hamsters, causing pathological lung lesions in animals infected intranasally. Clinical manifestations of the disease in hamsters infected with this virus were characterized by a decrease in temperature and body weight, wetness and ruffled fur, and frequent stroking of the nasal planum. High virus titers were observed following the virus isolation in cell cultures from nasal, oral swabs and lungs of animals infected intranasally. Pathological autopsy demonstrated pathological changes in the lungs. Moreover, transmission by airborne droplets has been established when a healthy hamster was kept together with animals infected using the intranasal method.</p><p><strong>Conclusion: </strong>In conclusion, our study showed that the Syrian hamster model is a useful tool for studying the SARS-CoV-2 pathogenesis, as well as testing vaccine candidates against acute respiratory syndrome type 2.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 6","pages":"513-525"},"PeriodicalIF":0.0,"publicationDate":"2023-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139058816","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The review article conducts an in-depth analysis of information gleaned from a comprehensive literature search across Scopus, Web of Science, and MedLine databases. The focal point of this search revolves around the identification and exploration of the mechanisms orchestrated by host cell factors in the replication cycle of the human immunodeficiency virus (HIV-1, Retroviridae: Orthoretrovirinae:Lentivirus:Human immunodeficiency virus-1). The article delves into two primary categories of proteins, namely HIV dependence factors (such as CypA, LEDGF, TSG101) and restriction factors (including SERINС5, TRIM5α, APOBEC3G), providing illustrative examples. The current understanding of the functioning mechanisms of these proteins is elucidated, and an evaluation is presented on the potential development of drugs for treating HIV infection. These drugs aim to either inhibit or stimulate the activity of host factors, offering insights into promising avenues for future research and therapeutic advancements.
这篇综述文章深入分析了从 Scopus、Web of Science 和 MedLine 数据库的全面文献检索中收集到的信息。这一搜索的重点是确定和探索宿主细胞因素在人类免疫缺陷病毒(HIV-1,逆转录病毒科:正逆转录病毒科:慢病毒:人类免疫缺陷病毒-1)。文章深入探讨了两大类蛋白质,即 HIV 依赖因子(如 CypA、LEDGF、TSG101)和限制因子(包括 SERINС5、TRIM5α、APOBEC3G),并提供了说明性实例。报告阐明了目前对这些蛋白质运作机制的理解,并对治疗艾滋病病毒感染的潜在药物开发进行了评估。这些药物旨在抑制或刺激宿主因子的活性,为未来的研究和治疗进展提供了有前景的途径。
{"title":"Cellular proteins as potential targets for antiretroviral therapy.","authors":"M R Bobkova","doi":"10.36233/0507-4088-207","DOIUrl":"10.36233/0507-4088-207","url":null,"abstract":"<p><p>The review article conducts an in-depth analysis of information gleaned from a comprehensive literature search across Scopus, Web of Science, and MedLine databases. The focal point of this search revolves around the identification and exploration of the mechanisms orchestrated by host cell factors in the replication cycle of the human immunodeficiency virus (HIV-1, Retroviridae: <i>Orthoretrovirinae:</i> <i>Lentivirus:</i> <i>Human immunodeficiency virus-1</i>). The article delves into two primary categories of proteins, namely HIV dependence factors (such as CypA, LEDGF, TSG101) and restriction factors (including SERINС5, TRIM5α, APOBEC3G), providing illustrative examples. The current understanding of the functioning mechanisms of these proteins is elucidated, and an evaluation is presented on the potential development of drugs for treating HIV infection. These drugs aim to either inhibit or stimulate the activity of host factors, offering insights into promising avenues for future research and therapeutic advancements.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 6","pages":"488-504"},"PeriodicalIF":0.0,"publicationDate":"2023-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139058820","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
G V Roev, N I Borisova, N V Chistyakova, A V Vyhodtseva, V G Akimkin, K F Khafizov
Introduction: Bastroviruses were discovered in the Netherlands in 2016 in human stool samples and show partial genetic similarities to astroviruses and hepatitis E viruses. Their association with disease onset has not yet been established.
Materials and methods: Metagenomic sequencing of fecal samples of Nyctalus noctula bats collected in the Russian Federation in 2023 was performed. Two almost complete genomes of bastroviruses were assembled. The zoonotic potential of these viruses was assessed using machine learning methods, their recombination was studied, and phylogenetic trees were constructed.
Results: A nearly complete bastrovirus genome was de novo assembled in one of the samples, and it was used to assemble another genome in another sample. The zoonotic potential of the virus from one of these samples was estimated as high. The existence of recombination between structural and non-structural polyproteins was demonstrated.
Conclusion: Two bastrovirus genomes were assembled, phylogenetic and recombination analyses were performed, and the zoonotic potential was evaluated.
{"title":"Bastroviruses (<i>Astroviridae</i>): genetic diversity and potential impact on human and animal health.","authors":"G V Roev, N I Borisova, N V Chistyakova, A V Vyhodtseva, V G Akimkin, K F Khafizov","doi":"10.36233/0507-4088-192","DOIUrl":"10.36233/0507-4088-192","url":null,"abstract":"<p><strong>Introduction: </strong>Bastroviruses were discovered in the Netherlands in 2016 in human stool samples and show partial genetic similarities to astroviruses and hepatitis E viruses. Their association with disease onset has not yet been established.</p><p><strong>Materials and methods: </strong>Metagenomic sequencing of fecal samples of <i>Nyctalus noctula</i> bats collected in the Russian Federation in 2023 was performed. Two almost complete genomes of bastroviruses were assembled. The zoonotic potential of these viruses was assessed using machine learning methods, their recombination was studied, and phylogenetic trees were constructed.</p><p><strong>Results: </strong>A nearly complete bastrovirus genome was de novo assembled in one of the samples, and it was used to assemble another genome in another sample. The zoonotic potential of the virus from one of these samples was estimated as high. The existence of recombination between structural and non-structural polyproteins was demonstrated.</p><p><strong>Conclusion: </strong>Two bastrovirus genomes were assembled, phylogenetic and recombination analyses were performed, and the zoonotic potential was evaluated.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 6","pages":"505-512"},"PeriodicalIF":0.0,"publicationDate":"2023-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139058819","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
P A Ivanov, A V Lyashko, V Y Kost, N F Lomakina, A A Rtishchev, N I Bunkova, T A Timofeeva, M A Balanova, S A Ionov, D V Gorikov, S G Markushin
Introduction: Polymerase proteins PB1 and PB2 determine the cold-adapted phenotype of the influenza virus A/Krasnodar/101/35/59 (H2N2), as was shown earlier.
Objective: The development of the reporter construct to determine the activity of viral polymerase at 33 and 37 °C using the minigenome method.
Materials and methods: Co-transfection of Cos-1 cells with pHW2000 plasmids expressing viral polymerase proteins PB1, PB2, PA, NP (minigenome) and reporter construct.
Results: Based on segment 8, two reporter constructs were created that contain a direct or inverted NS1-GFP-NS2 sequence for the expression of NS2 and NS1 proteins translationally fused with green fluorescent protein (GFP), which allowed the evaluation the transcriptional and/or replicative activity of viral polymerase.
Conclusion: Polymerase of virus A/Krasnodar/101/35/59 (H2N2) has higher replicative and transcriptional activity at 33 °C than at 37 °C. Its transcriptional activity is more temperature-dependent than its replicative activity. The replicative and transcriptional activity of polymerase A/Puerto Rico/8/34 virus (H1N1, Mount Sinai variant) have no significant differences and do not depend on temperature.
{"title":"Determination of cold-adapted influenza virus (Orthomyxoviridae: <i>Alphainfluenzavirus</i>) polymerase activity by the minigenome method with a fluorescent protein.","authors":"P A Ivanov, A V Lyashko, V Y Kost, N F Lomakina, A A Rtishchev, N I Bunkova, T A Timofeeva, M A Balanova, S A Ionov, D V Gorikov, S G Markushin","doi":"10.36233/0507-4088-203","DOIUrl":"10.36233/0507-4088-203","url":null,"abstract":"<p><strong>Introduction: </strong>Polymerase proteins PB1 and PB2 determine the cold-adapted phenotype of the influenza virus A/Krasnodar/101/35/59 (H2N2), as was shown earlier.</p><p><strong>Objective: </strong>The development of the reporter construct to determine the activity of viral polymerase at 33 and 37 °C using the minigenome method.</p><p><strong>Materials and methods: </strong>Co-transfection of Cos-1 cells with pHW2000 plasmids expressing viral polymerase proteins PB1, PB2, PA, NP (minigenome) and reporter construct.</p><p><strong>Results: </strong>Based on segment 8, two reporter constructs were created that contain a direct or inverted NS1-GFP-NS2 sequence for the expression of NS2 and NS1 proteins translationally fused with green fluorescent protein (GFP), which allowed the evaluation the transcriptional and/or replicative activity of viral polymerase.</p><p><strong>Conclusion: </strong>Polymerase of virus A/Krasnodar/101/35/59 (H2N2) has higher replicative and transcriptional activity at 33 °C than at 37 °C. Its transcriptional activity is more temperature-dependent than its replicative activity. The replicative and transcriptional activity of polymerase A/Puerto Rico/8/34 virus (H1N1, Mount Sinai variant) have no significant differences and do not depend on temperature.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 6","pages":"526-535"},"PeriodicalIF":0.0,"publicationDate":"2023-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139058822","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Research Institute of Epidemiology and Microbiology named after. G.P. Somova of Rospotrebnadzor regrets to announce that on September 23, 2023, at the age of 89, Natalia Nikolaevna Besednova, Doctor of Medical Sciences, Professor, Honored Scientist of the Russian Federation, full member of the Russian Academy of Sciences, laureate of the USSR State Prize, outstanding scientist, brilliant organizer, excellent teacher and wonderful person.
{"title":"Besednova Natalia Nikolaevna (02.02.1935 - 23.09.2023).","authors":"","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Research Institute of Epidemiology and Microbiology named after. G.P. Somova of Rospotrebnadzor regrets to announce that on September 23, 2023, at the age of 89, Natalia Nikolaevna Besednova, Doctor of Medical Sciences, Professor, Honored Scientist of the Russian Federation, full member of the Russian Academy of Sciences, laureate of the USSR State Prize, outstanding scientist, brilliant organizer, excellent teacher and wonderful person.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 5","pages":"455-456"},"PeriodicalIF":0.0,"publicationDate":"2023-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139058812","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
October 11, 2023 marked the 90th anniversary of the birth of the outstanding Russian virologist, academician of the Russian Academy of Sciences Nikolai Veniaminovich Kaverin. N.V. Kaverin was born in Leningrad into the famous literary family of Veniamin Aleksandrovich Kaverin and Lydia Nikolaevna Tynyanova. In 1951 he graduated from school with a gold medal and entered the 1st Moscow Medical Institute named after. THEM. Sechenov. During his senior years, Kaverin already worked at the Research Institute of Virology named after. DI. Ivanovsky RAMS, and in 1960, upon completion of graduate school, defended his Ph.D. thesis.
{"title":"To the 90th anniversary of the birth of Nikolai Veniaminovich Kaverin.","authors":"","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>October 11, 2023 marked the 90th anniversary of the birth of the outstanding Russian virologist, academician of the Russian Academy of Sciences Nikolai Veniaminovich Kaverin. N.V. Kaverin was born in Leningrad into the famous literary family of Veniamin Aleksandrovich Kaverin and Lydia Nikolaevna Tynyanova. In 1951 he graduated from school with a gold medal and entered the 1st Moscow Medical Institute named after. THEM. Sechenov. During his senior years, Kaverin already worked at the Research Institute of Virology named after. DI. Ivanovsky RAMS, and in 1960, upon completion of graduate school, defended his Ph.D. thesis.</p>","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"68 5","pages":"454"},"PeriodicalIF":0.0,"publicationDate":"2023-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139058814","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Amir Emami, Neda Pirbonyeh, Afagh Moattari, Fatemeh Javanmardi
Background. Data on the disease burden and circulation patterns of influenza B virus lineages for Iran are limited.
Objective. This review aims to describe the pattern of influenza B occurrence in Iran, comparing it with the proposed vaccine strains and determining the match and mismatch with the prescribed vaccine annually.
Methods. Various sources were used to retrieve information of the data; such as information from an online search of databases such as FluNet, GISAID, and NCBI. After extracting protein sequence records in GISAID, sequence alignment with vaccine strain and construction of a phylogenetic tree were performed. Subsequently, categories of the registered circulating strains were evaluated for matching with the vaccine strains.
Results. Of the total registered influenza-positive samples, 20.21% were related to influenza B virus. The phylogenic tree was designed based on 43 samples registered in the GISAID database; 76.74 and 23.25% sequences were of Yamagata and Victoria lineages, respectively. The most prevalent influenza B virus strains circulating during the study years belonged to the Yamagata lineage. In general, the match of the influenza B virus predominant circulating strains with administrated vaccines was observed in Iran. However, a high level of mismatch between the vaccine strain and Iranian isolates was identified in 2016‒2017.
Conclusion. The review of match and mismatch in influenza vaccine in order to improve the composition of the prescribed vaccine in each region is very important because the vaccine efficacy decreased when the strain included in vaccine did not match the circulating epidemic strain.
{"title":"A decade genetic diversity in Circulating influenza B virus in Iran (2010–2019): Divergence from WHO-recommended vaccine strains","authors":"Amir Emami, Neda Pirbonyeh, Afagh Moattari, Fatemeh Javanmardi","doi":"10.36233/0507-4088-180","DOIUrl":"https://doi.org/10.36233/0507-4088-180","url":null,"abstract":"Background. Data on the disease burden and circulation patterns of influenza B virus lineages for Iran are limited.
 Objective. This review aims to describe the pattern of influenza B occurrence in Iran, comparing it with the proposed vaccine strains and determining the match and mismatch with the prescribed vaccine annually.
 Methods. Various sources were used to retrieve information of the data; such as information from an online search of databases such as FluNet, GISAID, and NCBI. After extracting protein sequence records in GISAID, sequence alignment with vaccine strain and construction of a phylogenetic tree were performed. Subsequently, categories of the registered circulating strains were evaluated for matching with the vaccine strains.
 Results. Of the total registered influenza-positive samples, 20.21% were related to influenza B virus. The phylogenic tree was designed based on 43 samples registered in the GISAID database; 76.74 and 23.25% sequences were of Yamagata and Victoria lineages, respectively. The most prevalent influenza B virus strains circulating during the study years belonged to the Yamagata lineage. In general, the match of the influenza B virus predominant circulating strains with administrated vaccines was observed in Iran. However, a high level of mismatch between the vaccine strain and Iranian isolates was identified in 2016‒2017.
 Conclusion. The review of match and mismatch in influenza vaccine in order to improve the composition of the prescribed vaccine in each region is very important because the vaccine efficacy decreased when the strain included in vaccine did not match the circulating epidemic strain.","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"2 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135432560","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lyudmila I. Nikolaeva, Maya D. Stuchinskaya, Anna V. Dedova, Shevchenko G. Nadezhda, Irina N. Khlopova, Irina S. Kruzhkova, Lilya N. Merkulova, Lidya B. Kisteneva, Lyudmila V. Kolobukhina, Evgenya A. Mukasheva, Kirill G. Krasnoslobodtsev, Svetlana V. Trushakova, Anastasia S. Krepkaya, Victor V. Kuprianov, Natalia A. Nikitenko, Elizaveta A. Khadorich, Egor M. Burmistrov, Igor N. Tyurin, Natalia A. Antipyat, Elena I. Burtseva
Introduction. COVID-19 is characterized by a varied clinical course.
The aim of the work was to identify associations of SNPs of hemostatic system genes with COVID-19.
Materials and methods. DNA was isolated from patients (n=117) and healthy participants (n=104). All infected patients were divided into 3 groups, depending on disease severity assessment, which was appreciated by NEWS2. Another group consisted of participants, who had asymptomatic infection in the past. Determination of SNPs of the genes FGB (-455 G/A), FII (20210 G/A), FV (1691 G/A), FVII (10976 G/A), FXIIIA1 (103 G/T), ITGA2 (807 C/T), ITGB3 (1565 T/C), SERPINE1 (-675 5G/4G) were performed by PCR using the Genetics of Hemostasis kit (DNA-Technology, Russia).
Results. In analyzed SNPs, no significant differences were detected between the group of infected patients and healthy participants. But significant association was revealed in gene SERPINE1 (-675 5G/4G), when patient groups, differing in the disease severity, were analyzed relative to the group of participants with asymptomatic infection (p=0.0381; p=0 .0066; p=0.0009). It was found, that as COVID-19 severity scores increased, the proportion of 5G allele of gene SERPINE1 decreased, and the proportion of the 4G allele increased (p=0.005; p=0.009; p=0.0005). Similar processes were observed for genotypes 5G/5G and 4G/4G.
Discussion. The gene SERPINE1 (-675 5G/4G) is associated with the severity of COVID-19.
Conclusion. For the first time, it was discovered that 5G/5G genotype of gene SERPINE1 (-675 5G/4G) can be a marker of a milder course of COVID-19, and the 4G/4G genotype as a more severe one.
{"title":"Association of polymorphic variants of hemostatic system genes with the course of COVID-19","authors":"Lyudmila I. Nikolaeva, Maya D. Stuchinskaya, Anna V. Dedova, Shevchenko G. Nadezhda, Irina N. Khlopova, Irina S. Kruzhkova, Lilya N. Merkulova, Lidya B. Kisteneva, Lyudmila V. Kolobukhina, Evgenya A. Mukasheva, Kirill G. Krasnoslobodtsev, Svetlana V. Trushakova, Anastasia S. Krepkaya, Victor V. Kuprianov, Natalia A. Nikitenko, Elizaveta A. Khadorich, Egor M. Burmistrov, Igor N. Tyurin, Natalia A. Antipyat, Elena I. Burtseva","doi":"10.36233/0507-4088-197","DOIUrl":"https://doi.org/10.36233/0507-4088-197","url":null,"abstract":"Introduction. COVID-19 is characterized by a varied clinical course.
 The aim of the work was to identify associations of SNPs of hemostatic system genes with COVID-19.
 Materials and methods. DNA was isolated from patients (n=117) and healthy participants (n=104). All infected patients were divided into 3 groups, depending on disease severity assessment, which was appreciated by NEWS2. Another group consisted of participants, who had asymptomatic infection in the past. Determination of SNPs of the genes FGB (-455 G/A), FII (20210 G/A), FV (1691 G/A), FVII (10976 G/A), FXIIIA1 (103 G/T), ITGA2 (807 C/T), ITGB3 (1565 T/C), SERPINE1 (-675 5G/4G) were performed by PCR using the Genetics of Hemostasis kit (DNA-Technology, Russia).
 Results. In analyzed SNPs, no significant differences were detected between the group of infected patients and healthy participants. But significant association was revealed in gene SERPINE1 (-675 5G/4G), when patient groups, differing in the disease severity, were analyzed relative to the group of participants with asymptomatic infection (p=0.0381; p=0 .0066; p=0.0009). It was found, that as COVID-19 severity scores increased, the proportion of 5G allele of gene SERPINE1 decreased, and the proportion of the 4G allele increased (p=0.005; p=0.009; p=0.0005). Similar processes were observed for genotypes 5G/5G and 4G/4G.
 Discussion. The gene SERPINE1 (-675 5G/4G) is associated with the severity of COVID-19.
 Conclusion. For the first time, it was discovered that 5G/5G genotype of gene SERPINE1 (-675 5G/4G) can be a marker of a milder course of COVID-19, and the 4G/4G genotype as a more severe one.","PeriodicalId":23669,"journal":{"name":"Voprosy virusologii","volume":"7 8","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135432941","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}