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Effect of ethylenediaminetetraacetic, etidronic, and peracetic acids with different concentrations on the removal of Enterococcus faecalis biofilms from root canal walls: an in vitro study. 不同浓度的乙二胺四乙酸、乙地烯酸和过氧乙酸对根管壁上粪肠球菌生物膜去除的影响:一项体外研究
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-03-06 DOI: 10.1007/s11274-026-04823-2
Salev Zeyrek, Özgür İlke Ulusoy, Gülçin Akca, İlke Gaye Savur
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引用次数: 0
Enhancing vibriosis vaccination in fish: genetically modified Nannochloropsis sp. as an oral vaccine carrier. 加强鱼类弧菌病疫苗接种:转基因纳米绿藻作为口服疫苗载体。
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-03-03 DOI: 10.1007/s11274-026-04843-y
Aisamuddin Ardi Zainal Abidin, Nor Izzati Husna Noorhisham, Fatimah Md Yusoff, Abdul Rahman Omar, Khatijah Yusoff, Saila Ismail, Mohd Ezuan Khayat, Murni Marlina Abd Karim, Ina Salwany Md Yasin, Chou Min Chong, Zetty Norhana Balia Yusof

Vibriosis, caused by Vibrio species, threatens marine aquaculture worldwide. Traditional vaccination methods are labor-intensive, expensive, and stressful for fish. This study investigates genetically modified Nannochloropsis sp. as a novel oral vaccine carrier against vibriosis. Using homologous recombination, nitrate reductase gene was targeted to integrate an expression cassette containing the outer membrane protein kinase (OmpK) gene from V. harveyi. Transformed microalgae were generated through electroporation and screened with bleomycin. Transgenic lines were validated at genomic, transcriptional, and translational levels. The transgenic microalgae were incorporated into fish feed to assess vaccine efficacy in fish model for infectious disease, zebrafish (Danio rerio). Immune responses were analyzed by examining IgZ, TNF-α, and IL-1β gene expression. Efficacy was evaluated through histopathology and relative percentage of survival (RPS) following bacterial challenge. Results confirmed successful transformation, with microalgae surviving bleomycin screening at 30 µgml- 1 and exhibiting expression cassette integration via PCR and RT-PCR. Western and dot blot analyses confirmed OmpK protein expression. Vaccinated fish showed increased IgZ expression, indicating robust immune response. Fish receiving the oral vaccine achieved 90 ± 3% RPS compared to 36 ± 4.36% in controls. This approach promises to revolutionize fish vaccination, enhance aquaculture productivity, and reduce antibiotic dependence.

由弧菌引起的弧菌病威胁着全世界的海洋水产养殖。传统的疫苗接种方法是劳动密集型的,昂贵的,而且对鱼类来说压力很大。本研究探讨了转基因纳米绿藻作为一种新型弧菌病口服疫苗载体的作用。采用同源重组的方法,将含有海芽甘蓝外膜蛋白激酶(OmpK)基因的表达盒整合到硝酸盐还原酶基因中。通过电穿孔制备转化微藻,并用博来霉素进行筛选。转基因系在基因组、转录和翻译水平上进行了验证。将转基因微藻加入鱼饲料中,在斑马鱼传染性疾病模型中评价疫苗的效果。通过检测IgZ、TNF-α和IL-1β基因表达来分析免疫应答。通过组织病理学和细菌攻击后的相对存活率(RPS)来评估疗效。结果证实转化成功,微藻在30µgml- 1的博莱霉素筛选中存活,并通过PCR和RT-PCR显示表达盒整合。Western和dot blot分析证实了OmpK蛋白的表达。免疫后的鱼IgZ表达增加,表明免疫应答强劲。接受口服疫苗的鱼的RPS为90±3%,对照组为36±4.36%。这种方法有望彻底改变鱼类疫苗接种,提高水产养殖生产力,并减少对抗生素的依赖。
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引用次数: 0
Identification and evaluation of thermophilic bacteria isolated from Malaysian hot springs with potential for plastic polyvinyl chloride degradation. 马来西亚温泉中具有降解塑料聚氯乙烯潜力的嗜热细菌的鉴定和评价。
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-03-03 DOI: 10.1007/s11274-026-04875-4
Seng Chiew Toh, Sui Sien Leong, Samuel Lihan, Azizul Hakim Lahuri, Sabrina Rancang Khairul, Syeed Saifulazry Osman Al Edrus
{"title":"Identification and evaluation of thermophilic bacteria isolated from Malaysian hot springs with potential for plastic polyvinyl chloride degradation.","authors":"Seng Chiew Toh, Sui Sien Leong, Samuel Lihan, Azizul Hakim Lahuri, Sabrina Rancang Khairul, Syeed Saifulazry Osman Al Edrus","doi":"10.1007/s11274-026-04875-4","DOIUrl":"10.1007/s11274-026-04875-4","url":null,"abstract":"","PeriodicalId":23703,"journal":{"name":"World journal of microbiology & biotechnology","volume":"42 3","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12957119/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147345028","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Sustainable control of onion Fusarium basal rot using seed-applied Trichoderma spp. 施种木霉对洋葱基腐病的可持续防治。
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-03-03 DOI: 10.1007/s11274-026-04860-x
Reema Ghanayem, Shahed Ghanayem, Elhanan Dimant, Ofir Degani
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引用次数: 0
Diversity and evolutionary dynamics of universal stress proteins in the Liquorilactobacillus genus. 甘草乳酸菌属通用应激蛋白的多样性和进化动力学。
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-28 DOI: 10.1007/s11274-026-04821-4
Dayane da Silva Santos, Allyson Andrade Mendonça, Nara Suzy Aguiar Freitas, Marcos Antônio De Morais
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引用次数: 0
A comprehensive analysis of the kinetics of infection of lytic bacteriophages specific to the ESKAPE and critical pathogens. 对ESKAPE和关键病原体特异性溶噬菌体感染动力学的综合分析。
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-28 DOI: 10.1007/s11274-025-04762-4
Olaf Bajrak, Martyna Cieślik, Andrzej Górski, Ewa Jończyk-Matysiak
{"title":"A comprehensive analysis of the kinetics of infection of lytic bacteriophages specific to the ESKAPE and critical pathogens.","authors":"Olaf Bajrak, Martyna Cieślik, Andrzej Górski, Ewa Jończyk-Matysiak","doi":"10.1007/s11274-025-04762-4","DOIUrl":"10.1007/s11274-025-04762-4","url":null,"abstract":"","PeriodicalId":23703,"journal":{"name":"World journal of microbiology & biotechnology","volume":"42 3","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-02-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12950090/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147318448","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gut microbiota-mediated nitrogen recycling in the white Grub Holotrichia longipennis: A model for microbiome-targeted pest control. 肠道微生物介导的氮循环在白色蛴螬Holotrichia longipennis:微生物靶向害虫控制模型。
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-28 DOI: 10.1007/s11274-026-04824-1
J S Pavan, P M Deeksha, C N Rajarushi, Amit Umesh Paschapur, K S Rishika, Balasubramanian Ramakrishnan, Sabtharishi Subramanian
{"title":"Gut microbiota-mediated nitrogen recycling in the white Grub Holotrichia longipennis: A model for microbiome-targeted pest control.","authors":"J S Pavan, P M Deeksha, C N Rajarushi, Amit Umesh Paschapur, K S Rishika, Balasubramanian Ramakrishnan, Sabtharishi Subramanian","doi":"10.1007/s11274-026-04824-1","DOIUrl":"https://doi.org/10.1007/s11274-026-04824-1","url":null,"abstract":"","PeriodicalId":23703,"journal":{"name":"World journal of microbiology & biotechnology","volume":"42 3","pages":""},"PeriodicalIF":4.2,"publicationDate":"2026-02-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147318517","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
High-throughput antimicrobial efficacy tests on a 384PillarPlate. 384柱板高通量抗菌效果试验。
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-27 DOI: 10.1007/s11274-026-04805-4
Pranav Joshi, Prabha Acharya, Manav Goud Vanga, Oluwadara Fadeyibi, Gyu-Young Park, Sandra Paola Sanchez, Mauricio Mora-Pale, Moo-Yeal Lee

Preservatives, including antimicrobial compounds, are routinely added to home and personal care products such as dishwashing detergents to prevent microbial contamination during repeated consumer use. Traditional antimicrobial efficacy testing (T-AET) relies on colony counting methods, where microbial cocktails are inoculated into preservative-containing products and plated on agar to measure microbial survival. While considered a gold standard, T-AET is time-consuming, labor-intensive, costly, and prone to variability and error due to manual handling. To address these limitations, we developed a high-throughput, miniature, ATP-based, on-chip AET (O-AET) using a 384PillarPlate platform. Pseudomonas aeruginosa, Enterobacter cloacae, and Staphylococcus aureus were encapsulated in 3% agarose and exposed to test compounds and detergent formulations. ATP levels in viable microbes were quantified using the BacTiter-Glo™ luminescence assay to generate dose-response curves, IC50 values, and log reduction measurements. Two industrial antimicrobials, Acticide LG and Acticide MBR2, were evaluated, showing CV values below 8%. Nine detergent formulations from Colgate-Palmolive, including both fresh and aged samples (stored for 8 weeks at 40 °C), were tested. Log reduction data from O-AET showed strong correlation with T-AET. Using a 3-log reduction cutoff, O-AET achieved 98% sensitivity, 44% specificity, and 71% overall predictivity. The lower specificity was partly attributed to limited true negative samples used and nutrient deficiencies. The O-AET enables significant reduction in reagent volume, rapid turnaround, and compatibility with standard plate readers, making it cost-effective and scalable. This ATP bioluminescence-based platform provides a robust, reproducible, and high-throughput alternative to T-AET, with high potential to streamline product development and preservative screening in consumer care applications.

防腐剂,包括抗微生物化合物,通常被添加到家庭和个人护理产品中,如洗碗机洗涤剂,以防止消费者在重复使用过程中受到微生物污染。传统的抗菌功效测试(T-AET)依赖于菌落计数方法,将微生物鸡尾酒接种到含有防腐剂的产品中并镀在琼脂上以测量微生物的存活率。虽然T-AET被认为是黄金标准,但它耗时、劳动密集、成本高,而且由于人工处理容易出现变化和错误。为了解决这些限制,我们使用384PillarPlate平台开发了一种高通量、微型、基于atp的片上AET (O-AET)。铜绿假单胞菌、阴沟肠杆菌和金黄色葡萄球菌被包裹在3%琼脂糖中,并暴露于测试化合物和洗涤剂配方中。使用BacTiter-Glo™发光测定法定量活菌中的ATP水平,生成剂量-响应曲线、IC50值和对数减少测量值。对两种工业抗菌剂,杀菌剂LG和杀菌剂MBR2进行了评估,CV值低于8%。测试了来自高露洁棕榄的九种洗涤剂配方,包括新鲜和陈年样品(在40°C下储存8周)。O-AET的对数降维数据与T-AET有较强的相关性。使用3对数减少截断,O-AET达到98%的灵敏度,44%的特异性和71%的总体预测。较低的特异性部分归因于使用的真阴性样本有限和营养缺乏。O-AET可显着减少试剂量,快速周转,并与标准板阅读器兼容,使其具有成本效益和可扩展性。这个基于ATP生物发光的平台提供了一个强大的、可重复的、高通量的T-AET替代品,在简化产品开发和消费者护理应用中的防腐剂筛选方面具有很大的潜力。
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引用次数: 0
Impact of pectin methylesterase on endophyte communities and pathogen resistance in Arabidopsis under heat stress. 热胁迫下果胶甲基酯酶对拟南芥内生菌群落及病原菌抗性的影响
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-27 DOI: 10.1007/s11274-025-04777-x
Jing-Syuan Wang, Pei-Zhen Yang, Hui-Chen Wu

Global climate change and the rising prevalence of plant pathogens highlight the urgent need for sustainable strategies to enhance plant resilience. Microbial endophytes contribute to stress tolerance, yet their assembly is strongly influenced by host genetics. Here, we examined the roles of Arabidopsis thaliana pectin methylesterases PME12 and PME53, key enzymes in cell wall modification under heat stress, in shaping early endophyte colonization and modulating responses to Alternaria alternata, the causal agent of leaf blight. Heat stress promoted the enrichment of specific endophytes such as Rhodococcus ruber At-8, which exhibited strong antagonism toward A. alternata and enhanced seedling resistance, but provided limited protection in mature plants, indicating developmental-stage specificity in host-microbe interactions. Transcript analyses revealed that PME-mediated cell wall remodeling integrates heat and immune signaling by inducing HSFA2, HSP101, HSP18.2, APX2, GSTF8, PR1, and PDF1.2, thereby reinforcing stress adaptation and disease resistance. Collectively, these findings identify PME-dependent cell wall regulation as a pivotal mechanism linking environmental stress tolerance with endophyte-associated immunity.

全球气候变化和植物病原体的日益流行凸显了制定可持续战略以增强植物恢复力的迫切需要。微生物内生菌有助于抗逆性,但它们的组装受到宿主遗传的强烈影响。本文研究了热胁迫下细胞壁修饰的关键酶拟南芥果胶甲基酯酶PME12和PME53在塑造早期内生菌定植和调节对叶枯病病原菌alternnaria alternata反应中的作用。热胁迫促进了橡胶红球菌At-8等特定内生菌的富集,这些内生菌对绿僵菌表现出强烈的拮抗作用,增强了幼苗的抗性,但对成熟植株的保护作用有限,表明宿主-微生物相互作用在发育阶段具有特异性。转录本分析显示,pme介导的细胞壁重塑通过诱导HSFA2、HSP101、HSP18.2、APX2、GSTF8、PR1和PDF1.2,整合热和免疫信号,从而增强应激适应和抗病性。总的来说,这些发现确定了pme依赖的细胞壁调节是将环境胁迫耐受性与内生菌相关免疫联系起来的关键机制。
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引用次数: 0
Enzymatic production of prebiotic xylooligosaccharides. 酶法生产益生元低聚木糖。
IF 4.2 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-26 DOI: 10.1007/s11274-026-04863-8
Lucas F Almeida, Lanyu Li, Ronald P de Vries, Peicheng Sun, Gabriela Piccolo Maitan-Alfenas
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引用次数: 0
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World journal of microbiology & biotechnology
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