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Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology最新文献

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[Screening of apoptosis-related differential proteins in rheumatoid arthritis patients with cold-dampness syndrome based on protein microarray technology]. [基于蛋白微阵列技术筛选类风湿关节炎寒湿证患者细胞凋亡相关差异蛋白]。
Jianting Wen, Jian Liu, Hui Jiang, Lei Wan, Yue Sun, Xin Wang, Jie Wang

Objective Screening the differentially expressed proteins related to apoptosis in cold-dampness syndrome of rheumatoid arthritis (RA). Methods Peripheral blood mononuclear cells (PBMCs) were collected from healthy people and RA patients with cold-dampness syndrome. 43 apoptosis-related proteins were detected by antibody chip, which was verified by ELISA. Results In 43 apoptosis-related proteins, 10 of them were up-regulated and 3 were down-regulated. The most differentially expressed were tumor necrosis factor receptor 5 (CD40) and soluble tumor necrosis factor receptor 2 (sTNFR2). Compared with the normal group, the expression of CD40 and sTNFR2 in RA patients with cold-dampness syndrome increased significantly. The results of receiver operating characteristic curve (ROC) showed that CD40(AUC=0.8133) and sTNFR2(AUC=0.8117) could be used as diagnostic markers of RA patients with cold-dampness syndrome. The results of Spearman correlation analysis showed that CD40 was negatively correlated with Fas and Fas ligand (FasL), while sTNFR2 was positively correlated with erythrocyte sedimentation rate and negatively correlated with mental health score (MH). Logistic regression analysis showed that rheumatoid factor (RF), 28 joint disease activity scores (DAS28) and vitality (VT) were risk factors for CD40. ESR, anti-cyclic citrullinated peptide (CCP) antibody, self-rating depression scale (SAS) and MH were the risk factors of sTNFR2. Conclusion CD40 and sTNFR2 are proteins related to apoptosis in RA patients with cold-dampness syndrome, which are closely related to clinical indexes and apoptosis indexes.

目的筛选类风湿关节炎寒湿证细胞凋亡相关差异表达蛋白。方法采集健康人及寒湿证RA患者外周血单个核细胞(PBMCs)。抗体芯片检测43种凋亡相关蛋白,ELISA验证。结果43个凋亡相关蛋白中,10个表达上调,3个表达下调。差异表达最多的是肿瘤坏死因子受体5 (CD40)和可溶性肿瘤坏死因子受体2 (sTNFR2)。与正常组比较,RA寒湿证患者CD40和sTNFR2表达明显升高。受试者工作特征曲线(ROC)结果显示,CD40(AUC=0.8133)和sTNFR2(AUC=0.8117)可作为RA寒湿证患者的诊断指标。Spearman相关分析结果显示,CD40与Fas及Fas配体(FasL)呈负相关,sTNFR2与红细胞沉降率呈正相关,与心理健康评分(MH)呈负相关。Logistic回归分析显示,类风湿因子(RF)、28关节疾病活动度评分(DAS28)和活力(VT)是CD40的危险因素。ESR、抗环瓜氨酸肽(CCP)抗体、抑郁自评量表(SAS)和MH是sTNFR2的危险因素。结论CD40和sTNFR2是RA寒湿证患者细胞凋亡相关蛋白,与临床指标和细胞凋亡指标密切相关。
{"title":"[Screening of apoptosis-related differential proteins in rheumatoid arthritis patients with cold-dampness syndrome based on protein microarray technology].","authors":"Jianting Wen,&nbsp;Jian Liu,&nbsp;Hui Jiang,&nbsp;Lei Wan,&nbsp;Yue Sun,&nbsp;Xin Wang,&nbsp;Jie Wang","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Objective Screening the differentially expressed proteins related to apoptosis in cold-dampness syndrome of rheumatoid arthritis (RA). Methods Peripheral blood mononuclear cells (PBMCs) were collected from healthy people and RA patients with cold-dampness syndrome. 43 apoptosis-related proteins were detected by antibody chip, which was verified by ELISA. Results In 43 apoptosis-related proteins, 10 of them were up-regulated and 3 were down-regulated. The most differentially expressed were tumor necrosis factor receptor 5 (CD40) and soluble tumor necrosis factor receptor 2 (sTNFR2). Compared with the normal group, the expression of CD40 and sTNFR2 in RA patients with cold-dampness syndrome increased significantly. The results of receiver operating characteristic curve (ROC) showed that CD40(AUC=0.8133) and sTNFR2(AUC=0.8117) could be used as diagnostic markers of RA patients with cold-dampness syndrome. The results of Spearman correlation analysis showed that CD40 was negatively correlated with Fas and Fas ligand (FasL), while sTNFR2 was positively correlated with erythrocyte sedimentation rate and negatively correlated with mental health score (MH). Logistic regression analysis showed that rheumatoid factor (RF), 28 joint disease activity scores (DAS28) and vitality (VT) were risk factors for CD40. ESR, anti-cyclic citrullinated peptide (CCP) antibody, self-rating depression scale (SAS) and MH were the risk factors of sTNFR2. Conclusion CD40 and sTNFR2 are proteins related to apoptosis in RA patients with cold-dampness syndrome, which are closely related to clinical indexes and apoptosis indexes.</p>","PeriodicalId":23737,"journal":{"name":"Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology","volume":"39 2","pages":"169-174"},"PeriodicalIF":0.0,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9098705","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Construction of Flp-InTM CHO cell line stably expressing human cytochrome P450 oxidoreductase]. 稳定表达人细胞色素P450氧化还原酶的flip - intm CHO细胞系的构建
Huan Liu, Ting Liu, Dingyan Lu, Li Sun, Junqi He, Yongjun Li, Yonglin Wang, Jia Sun, Xiaolan Xi

Objective To establish a Flp-InTM CHO cell line stably expressing human cytochrome P450 oxidoreductase (POR) to lay a solid foundation for the further construction of cell lines stably co-expressing human POR and human cytochrome P450 (CYP). Methods POR recombinant lentivirus was established and infected with Flp-InTM CHO cells, and the expression of green fluorescent protein was observed by fluorescence microscope for monoclonal screening. Mitomycin C (MMC) cytotoxic assay, Western blot analysis and quantitative real-time PCR (qRT-PCR) were employed to detect the activity and expression of POR, and eventually obtained a cell line stably expressing POR (Flp-InTM CHO-POR). Flp-InTM CHO-POR cells (Flp-InTM CHO-POR-2C19) stably co-expressing POR and CYP2C19, and Flp-InTM CHO cells stably expressing CYP2C19 (Flp-InTM CHO-2C19) were constructed, and the activity of CYP2C19 was measured by cyclophosphamide (CPA). Results The consequences of MMC cytotoxic assay, Western blot and qRT-PCR illuminated that Flp-InTM CHO cells infected with POR recombinant lentivirus had elevated MMC metabolic activity and boosted the expression of POR mRNA and protein, compared with Flp-InTM CHO cells infected with negative control virus, indicating that Flp-InTM CHO-POR cells stably expressing POR were obtained. No significant disparity existed in the metabolic activity of CPA between Flp-InTM CHO-2C19 and Flp-InTM CHO cells, whereas the metabolic activity enhanced in Flp-InTM CHO-POR-2C19 and was significantly higher than in Flp-InTM CHO-2C19 cells. Conclusion The stable expression of Flp-InTM CHO-POR cell line is successfully established and can be further applied to construct CYP transgenic cells.

目的建立稳定表达人细胞色素P450氧化还原酶(POR)的Flp-InTM CHO细胞系,为进一步构建稳定共表达人细胞色素P450 (CYP)和人POR的细胞系奠定基础。方法建立POR重组慢病毒,感染Flp-InTM CHO细胞,在荧光显微镜下观察绿色荧光蛋白的表达,进行单克隆筛选。采用丝裂霉素C (Mitomycin C, MMC)细胞毒法、Western blot分析和实时荧光定量PCR (quantitative real-time PCR, qRT-PCR)检测POR的活性和表达,最终获得稳定表达POR的细胞系(Flp-InTM CHO-POR)。构建稳定共表达POR和CYP2C19的flip - intm CHO-POR细胞(flip - intm CHO-POR- 2c19)和稳定表达CYP2C19的flip - intm CHO细胞(flip - intm CHO- 2c19),并用环磷酰胺(CPA)检测CYP2C19的活性。结果MMC细胞毒试验、Western blot和qRT-PCR结果显示,与阴性对照病毒感染的Flp-InTM CHO细胞相比,重组POR慢病毒感染的Flp-InTM CHO细胞MMC代谢活性升高,POR mRNA和蛋白表达增加,表明获得了稳定表达POR的Flp-InTM CHO-POR细胞。CPA的代谢活性在Flp-InTM CHO- 2c19和Flp-InTM CHO细胞间无显著差异,而在Flp-InTM CHO- por - 2c19细胞中代谢活性增强,且显著高于Flp-InTM CHO- 2c19细胞。结论成功建立了稳定表达的Flp-InTM CHO-POR细胞系,可进一步用于构建CYP转基因细胞。
{"title":"[Construction of Flp-In<sup>TM</sup> CHO cell line stably expressing human cytochrome P450 oxidoreductase].","authors":"Huan Liu,&nbsp;Ting Liu,&nbsp;Dingyan Lu,&nbsp;Li Sun,&nbsp;Junqi He,&nbsp;Yongjun Li,&nbsp;Yonglin Wang,&nbsp;Jia Sun,&nbsp;Xiaolan Xi","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Objective To establish a Flp-In<sup>TM</sup> CHO cell line stably expressing human cytochrome P450 oxidoreductase (POR) to lay a solid foundation for the further construction of cell lines stably co-expressing human POR and human cytochrome P450 (CYP). Methods POR recombinant lentivirus was established and infected with Flp-In<sup>TM</sup> CHO cells, and the expression of green fluorescent protein was observed by fluorescence microscope for monoclonal screening. Mitomycin C (MMC) cytotoxic assay, Western blot analysis and quantitative real-time PCR (qRT-PCR) were employed to detect the activity and expression of POR, and eventually obtained a cell line stably expressing POR (Flp-In<sup>TM</sup> CHO-POR). Flp-In<sup>TM</sup> CHO-POR cells (Flp-In<sup>TM</sup> CHO-POR-2C19) stably co-expressing POR and CYP2C19, and Flp-In<sup>TM</sup> CHO cells stably expressing CYP2C19 (Flp-In<sup>TM</sup> CHO-2C19) were constructed, and the activity of CYP2C19 was measured by cyclophosphamide (CPA). Results The consequences of MMC cytotoxic assay, Western blot and qRT-PCR illuminated that Flp-In<sup>TM</sup> CHO cells infected with POR recombinant lentivirus had elevated MMC metabolic activity and boosted the expression of POR mRNA and protein, compared with Flp-In<sup>TM</sup> CHO cells infected with negative control virus, indicating that Flp-In<sup>TM</sup> CHO-POR cells stably expressing POR were obtained. No significant disparity existed in the metabolic activity of CPA between Flp-In<sup>TM</sup> CHO-2C19 and Flp-In<sup>TM</sup> CHO cells, whereas the metabolic activity enhanced in Flp-In<sup>TM</sup> CHO-POR-2C19 and was significantly higher than in Flp-In<sup>TM</sup> CHO-2C19 cells. Conclusion The stable expression of Flp-In<sup>TM</sup> CHO-POR cell line is successfully established and can be further applied to construct CYP transgenic cells.</p>","PeriodicalId":23737,"journal":{"name":"Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology","volume":"39 2","pages":"103-108"},"PeriodicalIF":0.0,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9393269","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Mongolian medicine Heisuga-25 promotes the expression of neuroskeletal protein, increases the content of neurotransmitter and improves the symptoms of Alzheimer's disease in mice]. 【蒙药平鹤25促进小鼠神经骨骼蛋白表达,增加神经递质含量,改善阿尔茨海默病症状】。
Yuqiu Yang, Yufeng Gao, Chelimoge Wang

Objective To investigate the effect and mechanism of Mongolian medicine Heisuga-25 on Alzheimer's disease (AD) mice. Methods Six month old SAMP8 mice were divided into model group, Heisuga-25 [360 mg/(kg.d), 90 mg/(kg.d)] treatment group, and donepezil control group[0.92 mg/(kg.d)], with 15 mice in each group. Another 15 6-month-old normal aging SAMR1 mice were selected as blank control group. The mice in the model group and blank control group were fed with normal saline, and the other groups were gavaged according to the dosage. All groups were gavaged once a day for 15 days. From Day 1 to Day 5 after administration, three mice in each group were taken and Morris water maze test was been used to detect the escape latency, times for crossing the platform and the residence time were detected. Nissl staining was used to observe the number of Nissl bodies. Western blot analysis and immunohistochemistry were used to detect the expression of microtubule associated protein 2 (MAP-2) and low molecular weight neurofilament protein (NF-L). ELISA was used to detect the contents of acetylcholine (ACh), 5-hydroxytryptamine (5-HT), norepinephrine (NE) and dopamine (DA) in cortex and hippocampus of mice. Results Compared with the blank control group, the escape latency was significantly prolonged, while the model group showed a decrease in the number of crossing the platform, residence time, Nissl bodies, and the protein expression of MAP-2 and NF-L. Compared with the model group, Heisuga-25 administration group exhibited an increase in the number of crossing the platform and residence time, Nissl bodies, and the protein expression of MAP-2 and NF-L, but a shortened escape latency. The effect of high-dose groupHeisuga-25 [360 mg /(kg.d)] on the above indexes was more obvious. Compared with the blank control group, the contents of ACh, NE, DA and 5-HT in hippocampus and cortex were decreased in the model group. Compared with the model group, the low-dose group, high-dose group and donepezil control group all observed an increase in the contents of ACh, NE, DA and 5-HT. Conclusion Mongolian medicine Heisuga-25 can improve learning and memory by protecting the neural function of AD model mice, which may be accounted for up-regulation of neuronal skeleton protein expression and increased content of neurotransmitters.

目的探讨蒙药平鹤25对小鼠阿尔茨海默病(AD)的作用及其机制。方法将6月龄SAMP8小鼠分为模型组、平贺-25 [360 mg/(kg.d)、90 mg/(kg.d)]治疗组和多奈哌齐对照组[0.92 mg/(kg.d)],每组15只。另取15只6月龄正常衰老SAMR1小鼠作为空白对照组。模型组和空白对照组小鼠灌胃生理盐水,其余各组按剂量灌胃。各组每天灌胃1次,连续灌胃15 d。给药后第1 ~第5天,每组取3只小鼠,采用Morris水迷宫法检测小鼠逃避潜伏期、穿越平台次数和停留时间。采用尼氏染色法观察尼氏体的数量。Western blot和免疫组化检测微管相关蛋白2 (MAP-2)和低分子量神经丝蛋白(NF-L)的表达。采用ELISA法检测小鼠皮质和海马组织中乙酰胆碱(ACh)、5-羟色胺(5-HT)、去甲肾上腺素(NE)和多巴胺(DA)的含量。结果与空白对照组比较,大鼠逃避潜伏期明显延长,模型组大鼠穿越平台次数、停留时间、尼氏体减少,MAP-2、NF-L蛋白表达减少。与模型组比较,平鹤-25给药组小鼠穿越平台次数和停留时间增加,尼氏小体增加,MAP-2和NF-L蛋白表达增加,逃避潜伏期缩短。高剂量组[360 mg /(kg.d)]对上述指标的影响更为明显。与空白对照组比较,模型组大鼠海马和皮质组织中乙酰胆碱、NE、DA、5-羟色胺含量均降低。与模型组比较,低剂量组、高剂量组和多奈哌齐对照组均升高乙酰胆碱、NE、DA和5-羟色胺含量。结论蒙药平鹤25通过保护AD模型小鼠的神经功能来改善学习记忆,其机制可能与上调神经元骨架蛋白表达和增加神经递质含量有关。
{"title":"[Mongolian medicine Heisuga-25 promotes the expression of neuroskeletal protein, increases the content of neurotransmitter and improves the symptoms of Alzheimer's disease in mice].","authors":"Yuqiu Yang,&nbsp;Yufeng Gao,&nbsp;Chelimoge Wang","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Objective To investigate the effect and mechanism of Mongolian medicine Heisuga-25 on Alzheimer's disease (AD) mice. Methods Six month old SAMP8 mice were divided into model group, Heisuga-25 [360 mg/(kg.d), 90 mg/(kg.d)] treatment group, and donepezil control group[0.92 mg/(kg.d)], with 15 mice in each group. Another 15 6-month-old normal aging SAMR1 mice were selected as blank control group. The mice in the model group and blank control group were fed with normal saline, and the other groups were gavaged according to the dosage. All groups were gavaged once a day for 15 days. From Day 1 to Day 5 after administration, three mice in each group were taken and Morris water maze test was been used to detect the escape latency, times for crossing the platform and the residence time were detected. Nissl staining was used to observe the number of Nissl bodies. Western blot analysis and immunohistochemistry were used to detect the expression of microtubule associated protein 2 (MAP-2) and low molecular weight neurofilament protein (NF-L). ELISA was used to detect the contents of acetylcholine (ACh), 5-hydroxytryptamine (5-HT), norepinephrine (NE) and dopamine (DA) in cortex and hippocampus of mice. Results Compared with the blank control group, the escape latency was significantly prolonged, while the model group showed a decrease in the number of crossing the platform, residence time, Nissl bodies, and the protein expression of MAP-2 and NF-L. Compared with the model group, Heisuga-25 administration group exhibited an increase in the number of crossing the platform and residence time, Nissl bodies, and the protein expression of MAP-2 and NF-L, but a shortened escape latency. The effect of high-dose groupHeisuga-25 [360 mg /(kg.d)] on the above indexes was more obvious. Compared with the blank control group, the contents of ACh, NE, DA and 5-HT in hippocampus and cortex were decreased in the model group. Compared with the model group, the low-dose group, high-dose group and donepezil control group all observed an increase in the contents of ACh, NE, DA and 5-HT. Conclusion Mongolian medicine Heisuga-25 can improve learning and memory by protecting the neural function of AD model mice, which may be accounted for up-regulation of neuronal skeleton protein expression and increased content of neurotransmitters.</p>","PeriodicalId":23737,"journal":{"name":"Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology","volume":"39 2","pages":"153-158"},"PeriodicalIF":0.0,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9098707","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Research progress in the effects of stress on microglial immune checkpoints]. [应激对小胶质免疫检查点影响的研究进展]。
Yue Cao, Junfeng Zhang

Microglia are the resident immune cells of the central nervous system (CNS). Microglia are usually in the surveillant or quiescent state which is tightly regulated by several mechanisms called microglial immune checkpoints. Microglial immune checkpoint mechanism consists of four dimensions: soluble restraining factors, cell-to-cell interactions, seclusion from the circulation, and transcriptional regulators. Stress may lead to a more potent activation state of microglia when a subsequent immune challenge arrives, which is known as the microglial priming. Stress can prime microglia by affecting microglial checkpoints.

小胶质细胞是中枢神经系统(CNS)的常驻免疫细胞。小胶质细胞通常处于监视或静止状态,这种状态受到称为小胶质免疫检查点的几种机制的严格调节。小胶质细胞免疫检查点机制包括四个维度:可溶性抑制因子、细胞间相互作用、循环隔离和转录调节因子。当随后的免疫挑战到来时,压力可能导致小胶质细胞更有效的激活状态,这被称为小胶质细胞启动。压力可以通过影响小胶质细胞检查点来激活小胶质细胞。
{"title":"[Research progress in the effects of stress on microglial immune checkpoints].","authors":"Yue Cao,&nbsp;Junfeng Zhang","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Microglia are the resident immune cells of the central nervous system (CNS). Microglia are usually in the surveillant or quiescent state which is tightly regulated by several mechanisms called microglial immune checkpoints. Microglial immune checkpoint mechanism consists of four dimensions: soluble restraining factors, cell-to-cell interactions, seclusion from the circulation, and transcriptional regulators. Stress may lead to a more potent activation state of microglia when a subsequent immune challenge arrives, which is known as the microglial priming. Stress can prime microglia by affecting microglial checkpoints.</p>","PeriodicalId":23737,"journal":{"name":"Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology","volume":"39 2","pages":"181-185"},"PeriodicalIF":0.0,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9445046","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Bioinformatic analysis of key targets and potential mechanism of Sangbaipi Decoction in the treatment of acute exacerbation of chronic obstructive pulmonary disease]. [桑白皮汤治疗慢性阻塞性肺疾病急性加重期关键靶点及潜在机制的生物信息学分析]。
Kun Wang, Huizhi Zhu, Lei Yang, Qingwen Xu, Fengchun Ren, Xiangguo Liu, Lei Wan

Objective To identify the key targets and molecular mechanisms of Sangbaipi decoction in the treatment of acute exacerbations of chronic obstructive pulmonary disease (AECOPD) by using network pharmacology. Methods The active components of Sangbaipi Decoction were searched in Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP) database, with the corresponding targets predicted. The related targets of AECOPD were searched within gene banks, OMIM and Drugbank.The names of prediction targets and disease targets were standardized by UniProt, and the intersection targets were selected. TCM component target network diagram was drawn and analyzed by Cytoscape 3.6.0. The common targets were imported into the metascape database for gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis, and molecular docking was carried out by using auto dock tools software. Results A total of 126 active ingredients in Sangbaipi decoction, 1351 predicted corresponding targets and 2296 disease-related targets were detected. The main active ingredients include quercetin, luteolin, kaempferol, wogonin β. The core targets of sitosterol involve tumor necrosis factor (TNF), interleukin-6 (IL-6), tumor protein p53 (TP53), mitogen activated protein kinase 8 (MAPK8) and MAPK14. A total of 2720 signals were obtained from GO enrichment analysis and 334 signal pathways were obtained from KEGG enrichment analysis. The molecular docking results showed that the main active components can bind to the core target, at a stable the binding conformation. Conclusion Sangbaipi decoction may have anti-inflammatory, anti-oxidant and other biological effects through multiple active ingredients, multiple targets and signal pathways, thus effectively treating AECOPD.

目的应用网络药理学方法,探讨桑白皮汤治疗慢性阻塞性肺疾病急性加重期的关键靶点及分子机制。方法在中药系统药理学数据库与分析平台(TCMSP)数据库中检索桑白皮汤的有效成分,并预测其作用靶点。在基因库、OMIM和Drugbank中检索AECOPD的相关靶点。用UniProt对预测靶点和疾病靶点名称进行标准化,选择交叉靶点。利用Cytoscape 3.6.0绘制中药成分目标网络图并进行分析。将常见靶点导入metscape数据库,进行基因本体(GO)和京都基因与基因组百科全书(KEGG)富集分析,利用自动对接工具软件进行分子对接。结果桑白皮汤共检出126种有效成分,预测相应靶点1351个,检出疾病相关靶点2296个。主要有效成分有槲皮素、木犀草素、山奈酚、木犀草素β。谷甾醇的核心作用靶点包括肿瘤坏死因子(TNF)、白细胞介素-6 (IL-6)、肿瘤蛋白p53 (TP53)、丝裂原活化蛋白激酶8 (MAPK8)和MAPK14。GO富集分析共获得2720个信号,KEGG富集分析共获得334个信号通路。分子对接结果表明,主要活性成分能与核心靶点结合,并以稳定的结合构象结合。结论桑白皮汤可能通过多活性成分、多靶点和信号通路发挥抗炎、抗氧化等生物学作用,有效治疗AECOPD。
{"title":"[Bioinformatic analysis of key targets and potential mechanism of Sangbaipi Decoction in the treatment of acute exacerbation of chronic obstructive pulmonary disease].","authors":"Kun Wang,&nbsp;Huizhi Zhu,&nbsp;Lei Yang,&nbsp;Qingwen Xu,&nbsp;Fengchun Ren,&nbsp;Xiangguo Liu,&nbsp;Lei Wan","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Objective To identify the key targets and molecular mechanisms of Sangbaipi decoction in the treatment of acute exacerbations of chronic obstructive pulmonary disease (AECOPD) by using network pharmacology. Methods The active components of Sangbaipi Decoction were searched in Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP) database, with the corresponding targets predicted. The related targets of AECOPD were searched within gene banks, OMIM and Drugbank.The names of prediction targets and disease targets were standardized by UniProt, and the intersection targets were selected. TCM component target network diagram was drawn and analyzed by Cytoscape 3.6.0. The common targets were imported into the metascape database for gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis, and molecular docking was carried out by using auto dock tools software. Results A total of 126 active ingredients in Sangbaipi decoction, 1351 predicted corresponding targets and 2296 disease-related targets were detected. The main active ingredients include quercetin, luteolin, kaempferol, wogonin β. The core targets of sitosterol involve tumor necrosis factor (TNF), interleukin-6 (IL-6), tumor protein p53 (TP53), mitogen activated protein kinase 8 (MAPK8) and MAPK14. A total of 2720 signals were obtained from GO enrichment analysis and 334 signal pathways were obtained from KEGG enrichment analysis. The molecular docking results showed that the main active components can bind to the core target, at a stable the binding conformation. Conclusion Sangbaipi decoction may have anti-inflammatory, anti-oxidant and other biological effects through multiple active ingredients, multiple targets and signal pathways, thus effectively treating AECOPD.</p>","PeriodicalId":23737,"journal":{"name":"Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology","volume":"39 2","pages":"130-137"},"PeriodicalIF":0.0,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9393274","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[GLIS family zinc finger protein 2 (GLIS2) negatively regulates the Wnt/β-catenin pathway to inhibit the osteogenic differentiation of human bone marrow mesenchymal stem cells]. [GLIS家族锌指蛋白2 (GLIS2)负调控Wnt/β-catenin通路抑制人骨髓间充质干细胞成骨分化]。
Yanli Zhao, Zhiqiang Kang, Yu Mao, Fang Luo, Yajie Huo

Objective To investigate how the human GLIS family zinc finger protein 2 (GLIS2) regulate the Wnt/β-catenin pathway and its influence on the differentiation of human bone marrow mesenchymal stem cells (BMMSCs). Methods Human BMMSCs were randomly divided into blank group, osteogenic induction group, GLIS2 gene overexpression (ad-GLIS2) group, ad-GLIS2 negative control group, gene knockdown (si-GLIS2) group, and si-GLIS2 negative control (si-NC) group. The expression of GLIS2 mRNA in each group was detected by reverse transcription-PCR to determine the transfection status; alkaline phosphatase (ALP) activity was detected by phenyl-p-nitrophenyl phosphate (PNPP), and calcified nodule formation was tested by alizarin red staining to determine its osteogenic properties; the activation of intracellular Wnt/β-catenin pathway was detected by T cell factor/lymphoid enhancer factor (TCF/LEF) reporter kit; the expression of GLIS2, Runt-related transcription factor 2 (Runx2), osteopontin (OPN), and osterix was detected by Western blot analysis. The interaction between GLIS2 and β-catenin was verified by GST-pulldown. Results Compared with the blank group, the ALP activity and calcified nodule formation of BMMSCs in the osteogenic induction group increased, and the Wnt/β-catenin pathway activity and the expression of osteogenic differentiation-related proteins increased, the osteogenic ability increased, while the expression of GLIS2 decreased. Up-regulating the expression of GLIS2 could inhibit the osteogenic differentiation of BMMSCs, while suppress the activity of the Wnt/β-catenin pathway and the expression of osteogenic differentiation-related proteins on the contrary. Down-regulating the expression of GLIS2 could promote the osteogenic differentiation of BMMSCs, and improve the activity of the Wnt/β-catenin pathway and the expression of osteogenic differentiation-related proteins. There was an interaction between β-catenin and GLIS2. Conclusion GLIS2 may negatively regulate the activation of Wnt/β-catenin pathway and affect the osteogenic differentiation of BMMSCs.

目的探讨GLIS家族锌指蛋白2 (GLIS2)调控Wnt/β-catenin通路及其对人骨髓间充质干细胞(BMMSCs)分化的影响。方法将人骨髓间充质干细胞随机分为空白组、成骨诱导组、GLIS2基因过表达组(ad-GLIS2)、ad-GLIS2阴性对照组、基因敲低组(si-GLIS2)和si-GLIS2阴性对照组(si-NC)。通过逆转录- pcr检测各组GLIS2 mRNA的表达,判断转染状态;采用PNPP法检测碱性磷酸酶(ALP)活性,茜素红染色法检测钙化结节形成情况,测定其成骨性能;采用T细胞因子/淋巴细胞增强因子(TCF/LEF)报告试剂盒检测细胞内Wnt/β-catenin通路的激活情况;Western blot法检测GLIS2、runt相关转录因子2 (Runx2)、骨桥蛋白(OPN)、osterix的表达。gst -pull - down验证了GLIS2与β-catenin的相互作用。结果与空白组比较,成骨诱导组BMMSCs ALP活性和钙化结节形成增加,Wnt/β-catenin通路活性和成骨分化相关蛋白表达增加,成骨能力增强,GLIS2表达降低。上调GLIS2的表达可抑制BMMSCs的成骨分化,而抑制Wnt/β-catenin通路的活性,抑制成骨分化相关蛋白的表达。下调GLIS2的表达可促进BMMSCs的成骨分化,提高Wnt/β-catenin通路活性和成骨分化相关蛋白的表达。β-catenin与GLIS2存在相互作用。结论GLIS2可能负调控Wnt/β-catenin通路的激活,影响骨髓间充质干细胞成骨分化。
{"title":"[GLIS family zinc finger protein 2 (GLIS2) negatively regulates the Wnt/β-catenin pathway to inhibit the osteogenic differentiation of human bone marrow mesenchymal stem cells].","authors":"Yanli Zhao,&nbsp;Zhiqiang Kang,&nbsp;Yu Mao,&nbsp;Fang Luo,&nbsp;Yajie Huo","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Objective To investigate how the human GLIS family zinc finger protein 2 (GLIS2) regulate the Wnt/β-catenin pathway and its influence on the differentiation of human bone marrow mesenchymal stem cells (BMMSCs). Methods Human BMMSCs were randomly divided into blank group, osteogenic induction group, GLIS2 gene overexpression (ad-GLIS2) group, ad-GLIS2 negative control group, gene knockdown (si-GLIS2) group, and si-GLIS2 negative control (si-NC) group. The expression of GLIS2 mRNA in each group was detected by reverse transcription-PCR to determine the transfection status; alkaline phosphatase (ALP) activity was detected by phenyl-p-nitrophenyl phosphate (PNPP), and calcified nodule formation was tested by alizarin red staining to determine its osteogenic properties; the activation of intracellular Wnt/β-catenin pathway was detected by T cell factor/lymphoid enhancer factor (TCF/LEF) reporter kit; the expression of GLIS2, Runt-related transcription factor 2 (Runx2), osteopontin (OPN), and osterix was detected by Western blot analysis. The interaction between GLIS2 and β-catenin was verified by GST-pulldown. Results Compared with the blank group, the ALP activity and calcified nodule formation of BMMSCs in the osteogenic induction group increased, and the Wnt/β-catenin pathway activity and the expression of osteogenic differentiation-related proteins increased, the osteogenic ability increased, while the expression of GLIS2 decreased. Up-regulating the expression of GLIS2 could inhibit the osteogenic differentiation of BMMSCs, while suppress the activity of the Wnt/β-catenin pathway and the expression of osteogenic differentiation-related proteins on the contrary. Down-regulating the expression of GLIS2 could promote the osteogenic differentiation of BMMSCs, and improve the activity of the Wnt/β-catenin pathway and the expression of osteogenic differentiation-related proteins. There was an interaction between β-catenin and GLIS2. Conclusion GLIS2 may negatively regulate the activation of Wnt/β-catenin pathway and affect the osteogenic differentiation of BMMSCs.</p>","PeriodicalId":23737,"journal":{"name":"Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology","volume":"39 2","pages":"159-164"},"PeriodicalIF":0.0,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9393275","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Prokaryotic expression and polyclonal antibodies preparation and identification of human focal adhesion kinase (FAK)]. 人局灶黏附激酶(FAK)的原核表达、多克隆抗体制备及鉴定。
Li Zhang, Ya Zhang, Jiangying Ji, Ziyu Wei, Jiayu Liu, Tao Xu, Hongtao Wang

Objective To Clone, express, and purify the focal adhesion kinase (FAK) gene C-terminal focal adhesion location sequence (aa798-aa1041), and to prepare and identify the rabbit anti-FAK polyclonal antibodies. Methods The C-terminal (2671 bp-3402 bp) gene of the FAK gene was amplified by PCR in vitro and cloned into pCZN1 vector to construct a pCZN1-FAK recombinant expression vector. The recombinant expression vector was transformed into E. coli expression strain BL21 (DE3) competent cells, and then induced by isopropy-β-D-thiogalactoside (IPTG). The protein was purified by affinity chromatography resin Ni-NTA and immunized with New Zealand white Rabbit to prepare polyclonal antibodies. The antibody titer was detected by indirect ELISA and the specificity was identified by Western blot analysis. Results The pCZN1-FAK recombinant expression vector was successfully constructed. The FAK protein was mainly expressed in the form of inclusion bodies. After purification of the target protein, the prepared rabbit anti-FAK polyclonal antibody showed a titer of 1:512 000, and could specifically react with exogenous and endogenous FAK proteins. Conclusion The FAK protein is successfully cloned, expressed and purified, and a rabbit anti-FAK polyclonal antibody is prepared, which can be used for the specific detection of endogenous FAK protein.

目的克隆、表达和纯化局灶黏附激酶(FAK)基因c端局灶黏附定位序列(aa798-aa1041),制备和鉴定兔抗FAK多克隆抗体。方法体外PCR扩增FAK基因c端(2671 bp ~ 3402 bp)基因,将其克隆到pCZN1载体中,构建pCZN1-FAK重组表达载体。将重组表达载体转化到大肠杆菌表达菌株BL21 (DE3)感受态细胞中,用异丙基-β- d -硫代半乳糖苷(IPTG)诱导表达。采用Ni-NTA亲和层析树脂纯化该蛋白,并用新西兰大白兔免疫制备多克隆抗体。间接ELISA法检测抗体滴度,Western blot法鉴定特异性。结果成功构建了pCZN1-FAK重组表达载体。FAK蛋白主要以包涵体的形式表达。目的蛋白纯化后制备的兔抗FAK多克隆抗体效价为1:12 000,能与外源和内源FAK蛋白特异性反应。结论成功克隆、表达和纯化了FAK蛋白,制备了兔抗FAK多克隆抗体,可用于内源性FAK蛋白的特异性检测。
{"title":"[Prokaryotic expression and polyclonal antibodies preparation and identification of human focal adhesion kinase (FAK)].","authors":"Li Zhang,&nbsp;Ya Zhang,&nbsp;Jiangying Ji,&nbsp;Ziyu Wei,&nbsp;Jiayu Liu,&nbsp;Tao Xu,&nbsp;Hongtao Wang","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Objective To Clone, express, and purify the focal adhesion kinase (FAK) gene C-terminal focal adhesion location sequence (aa798-aa1041), and to prepare and identify the rabbit anti-FAK polyclonal antibodies. Methods The C-terminal (2671 bp-3402 bp) gene of the FAK gene was amplified by PCR in vitro and cloned into pCZN1 vector to construct a pCZN1-FAK recombinant expression vector. The recombinant expression vector was transformed into E. coli expression strain BL21 (DE3) competent cells, and then induced by isopropy-β-D-thiogalactoside (IPTG). The protein was purified by affinity chromatography resin Ni-NTA and immunized with New Zealand white Rabbit to prepare polyclonal antibodies. The antibody titer was detected by indirect ELISA and the specificity was identified by Western blot analysis. Results The pCZN1-FAK recombinant expression vector was successfully constructed. The FAK protein was mainly expressed in the form of inclusion bodies. After purification of the target protein, the prepared rabbit anti-FAK polyclonal antibody showed a titer of 1:512 000, and could specifically react with exogenous and endogenous FAK proteins. Conclusion The FAK protein is successfully cloned, expressed and purified, and a rabbit anti-FAK polyclonal antibody is prepared, which can be used for the specific detection of endogenous FAK protein.</p>","PeriodicalId":23737,"journal":{"name":"Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology","volume":"39 2","pages":"175-180"},"PeriodicalIF":0.0,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9098706","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Prediction and analysis of B cell and T cell epitopes in the spike protein of SARS-CoV-2 by bioinformatics]. [基于生物信息学的SARS-CoV-2刺突蛋白B细胞和T细胞表位预测与分析]。
Jia Tao, Shasha Li, Jihui Yang, Tingrui Zhang, Yongxue Lyu, Wei Zhao

Objective To analyze structural features for spike (S) protein of the SARS-CoV-2 and to predict potential B cell and T cell epitopes using bioinformatics. Methods The amino acid sequence of S protein from the NCBI GenBank database was retrieved. Its physicochemical properties were analyzed using ProtParam online program. The secondary structure of S protein was analyzed using Lasergene software and SOPMA online service. The tertiary structure model of S protein was established by Phyre2 and Rasmol software. Finally, B cell epitopes were predicted using ABCpred, BepiPred and BcePred; T cell epitopes were predicted using IDBE software. Results S protein is a 1273 amino acid sequence with the isoelectric point at 6.24 and atomic composition as C6336H9770N1656O1894S54, which was classified as a stable and hydrophilic protein. GramierRobson method analysis revealed that the secondary structure of S protein comprised 23.5% α-helixes, 53.7% β-sheets, 14.9% β-turns and 8.33% random coils. Chou-Fasman method analysis revealed that the secondary structure of S protein comprised 20.9% α-helixes, 35.5% β-sheets, 35.2% β-turns. Online service SOPMA analysis revealed that the secondary structure of S protein comprised 28.59% α-helixes, 23.25% β-sheets, 3.38% β-turns and 44.78% random coils. The numbers of B cell epitopes according to ABCpred, BepiPred and BcePred databases were 5,11 and 6. Five epitopes for CD8+ T cell and CD4+ T cell were chosen as potential epitopes. Conclusion Bioinformatics can predict B cell and T cell epitopes in the S protein of the SARS-CoV-2, which lays a foundation for developing vaccines.

目的分析SARS-CoV-2刺突(S)蛋白的结构特征,并应用生物信息学方法预测潜在的B细胞和T细胞表位。方法从NCBI GenBank数据库中检索S蛋白的氨基酸序列。利用ProtParam在线程序对其理化性质进行了分析。利用Lasergene软件和SOPMA在线服务对S蛋白的二级结构进行分析。利用Phyre2和Rasmol软件建立S蛋白三级结构模型。最后,利用ABCpred、BepiPred和BcePred预测B细胞表位;使用IDBE软件预测T细胞表位。结果S蛋白为1273个氨基酸序列,等电点为6.24,原子组成为C6336H9770N1656O1894S54,属于稳定的亲水性蛋白。GramierRobson法分析表明,S蛋白的二级结构由23.5%的α-螺旋、53.7%的β-片、14.9%的β-匝和8.33%的随机线圈组成。Chou-Fasman方法分析表明,S蛋白的二级结构由20.9%的α-螺旋、35.5%的β-片和35.2%的β-弯组成。在线服务SOPMA分析显示,S蛋白的二级结构由28.59%的α-螺旋、23.25%的β-片、3.38%的β-匝和44.78%的随机线圈组成。ABCpred、BepiPred和BcePred数据库显示的B细胞表位分别为5、11和6个。选择CD8+ T细胞和CD4+ T细胞的5个表位作为潜在的表位。结论生物信息学可预测SARS-CoV-2 S蛋白的B细胞和T细胞表位,为研制疫苗奠定基础。
{"title":"[Prediction and analysis of B cell and T cell epitopes in the spike protein of SARS-CoV-2 by bioinformatics].","authors":"Jia Tao,&nbsp;Shasha Li,&nbsp;Jihui Yang,&nbsp;Tingrui Zhang,&nbsp;Yongxue Lyu,&nbsp;Wei Zhao","doi":"","DOIUrl":"","url":null,"abstract":"<p><p>Objective To analyze structural features for spike (S) protein of the SARS-CoV-2 and to predict potential B cell and T cell epitopes using bioinformatics. Methods The amino acid sequence of S protein from the NCBI GenBank database was retrieved. Its physicochemical properties were analyzed using ProtParam online program. The secondary structure of S protein was analyzed using Lasergene software and SOPMA online service. The tertiary structure model of S protein was established by Phyre2 and Rasmol software. Finally, B cell epitopes were predicted using ABCpred, BepiPred and BcePred; T cell epitopes were predicted using IDBE software. Results S protein is a 1273 amino acid sequence with the isoelectric point at 6.24 and atomic composition as C<sub>6336</sub>H<sub>9770</sub>N<sub>1656</sub>O<sub>1894</sub>S<sub>54</sub>, which was classified as a stable and hydrophilic protein. GramierRobson method analysis revealed that the secondary structure of S protein comprised 23.5% α-helixes, 53.7% β-sheets, 14.9% β-turns and 8.33% random coils. Chou-Fasman method analysis revealed that the secondary structure of S protein comprised 20.9% α-helixes, 35.5% β-sheets, 35.2% β-turns. Online service SOPMA analysis revealed that the secondary structure of S protein comprised 28.59% α-helixes, 23.25% β-sheets, 3.38% β-turns and 44.78% random coils. The numbers of B cell epitopes according to ABCpred, BepiPred and BcePred databases were 5,11 and 6. Five epitopes for CD8<sup>+</sup> T cell and CD4<sup>+</sup> T cell were chosen as potential epitopes. Conclusion Bioinformatics can predict B cell and T cell epitopes in the S protein of the SARS-CoV-2, which lays a foundation for developing vaccines.</p>","PeriodicalId":23737,"journal":{"name":"Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology","volume":"39 1","pages":"49-56"},"PeriodicalIF":0.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10529507","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[The off-target effects of dynamin inhibitor Dyngo-4a during the internalization of dextran by bone marrow mesenchymal stem cells in rat]. [动力蛋白抑制剂Dyngo-4a在大鼠骨髓间充质干细胞内化葡聚糖过程中的脱靶效应]。
Ying Zhang, Jing Zhu, Hao Xu, Qin Yi, Liang Yan, Liang Ye, Xinyuan Zhang, Bin Tan

Objective To investigate the possible off-target effects of dynamin (DNM) inhibitor Dyngo-4a in dynamin-dependent endocytic pathways. Methods Bone marrow mesenchymal stem cells (BMSCs) obtained from SD rats were isolated and cultured, and identified by flow cytometry. The cells were divided into inhibitor control group, Dyngo-4a-treated group, negative control siRNA (si-NC) transfection group, DNM2 siRNA transfection (si-DNM2) group, si-DNM2 and Dyngo-4a co-treated group. Real time quantitative PCR and Western blot analysis were used to verify the silencing efficiencies of DNM2 gene and CCK-8 assay were used to detect the cell viability after Dyngo-4a treatment. Confocal microscopy was used to detect the number and mean fluorescence intensity (MFI) of transferrin-Dylight649-positive and dextran-TMR-positive vesicles. Results The mRNA and protein expression levels of DNM2 were down-regulated using small interfering RNA. The number of transferrin-Dylight649-positive vesicles significantly decreased in si-DNM2 group compared with si-NC group. For the number and MFI of dextran-TMR-positive vesicles, no significant change was observed between the si-DNM2 group and the si-NC group, but there was a significant reduction in the si-DNM2 and Dyngo-4a co-treated group compared with the si-DNM2 group. A significant decrease was also found in the Dyngo-4a-treated group compared with the inhibitor control group. Conclusion The off-target effects of dynamin inhibitor Dyngo-4a presents in the internalization of dextran by BMSCs.

目的探讨动力蛋白(DNM)抑制剂Dyngo-4a在动力蛋白依赖的内吞途径中可能存在的脱靶作用。方法分离培养SD大鼠骨髓间充质干细胞,采用流式细胞术进行鉴定。细胞分为抑制剂对照组、Dyngo-4a处理组、阴性对照siRNA (si-NC)转染组、DNM2 siRNA转染(si-DNM2)组、si-DNM2与Dyngo-4a共处理组。采用实时定量PCR和Western blot方法验证DNM2基因的沉默效果,采用CCK-8法检测dygo -4a处理后的细胞活力。用共聚焦显微镜检测转铁蛋白- dylight649阳性和右旋糖酐- tmr阳性囊泡的数量和平均荧光强度(MFI)。结果用小干扰RNA下调DNM2 mRNA和蛋白的表达水平。与si-NC组相比,si-DNM2组转铁蛋白- dylight649阳性囊泡数量明显减少。对于右旋糖酐- tmr阳性囊泡的数量和MFI, si-DNM2组与si-NC组之间无显著变化,但si-DNM2与dygo -4a共处理组与si-DNM2组相比有显著降低。与抑制剂对照组相比,dygo -4a治疗组也有显著降低。结论动力蛋白抑制剂Dyngo-4a在骨髓间充质干细胞右旋糖酐内化过程中存在脱靶作用。
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引用次数: 0
[Bioinformatic analysis of prognostic metabolism-related genes in lung adenocarcinoma]. [肺腺癌预后代谢相关基因的生物信息学分析]。
Wenting Zhang, Yafeng Liu, Chunxiao Hu, Xueqin Wang, Jun Xie, Xue Zhang, Wanfa Hu, Jing Wu, Yingru Xing, Dong Hu

Objective To construct and validate a prognostic model for lung adenocarcinoma based on bioinformatics of metabolic genes. Methods Lung adenocarcinoma-related data from The Cancer Genome Atlas (TCGA) database and gene expression omnibus (GEO) were acquired, and LASSO regression was used to construct multi-gene prognostic models and calculate risk-score (RS). Univariate and multivariate Cox independent prognostic analysis was performed. The area under receiver operating characteristic (ROC) curve (AUC) of the model was evaluated by ROC curve and survival analysis was performed. Nomogram were constructed to evaluate the feasibility of the model, and metabolic gene functional enrichment analysis was performed by GSEA. Tumor immune estimation resource (TIMER) database was used to analyze the correlation of patients RS with immune cell infiltration and with the expression of immune checkpoint molecules. Results The TCGA database was used to construct a prognostic model for lung adenocarcinoma based on 18 metabolism-related genes, and RS was used as an independent prognostic factor. The area under the ROC curve was 0.713. Survival analysis showed that overall survival was higher in the low-risk group compared to the high-risk group, and the prognostic model was associated with infiltration of immune cells and with the expression of immune checkpoint molecules. Conclusion RS is an independent prognostic factor in the prognostic model of lung adenocarcinoma with metabolic genes, suggesting a high prognostic value of this model.

目的建立并验证基于代谢基因生物信息学的肺腺癌预后模型。方法从美国癌症基因组图谱(Cancer Genome Atlas, TCGA)数据库和基因表达图谱(gene expression omnibus, GEO)中获取肺腺癌相关数据,采用LASSO回归构建多基因预后模型并计算风险评分(risk-score, RS)。进行单因素和多因素Cox独立预后分析。采用ROC曲线评价模型的受试者工作特征曲线下面积(AUC),并进行生存分析。构建Nomogram来评估模型的可行性,并通过GSEA进行代谢基因功能富集分析。利用肿瘤免疫估计资源(Tumor immune estimation resource, TIMER)数据库分析患者RS与免疫细胞浸润及免疫检查点分子表达的相关性。结果利用TCGA数据库构建了基于18个代谢相关基因的肺腺癌预后模型,RS作为独立预后因素。ROC曲线下面积为0.713。生存分析显示,低危组总生存率高于高危组,预后模型与免疫细胞浸润和免疫检查点分子表达有关。结论RS在肺腺癌代谢基因预后模型中是一个独立的预后因素,提示该模型具有较高的预后价值。
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引用次数: 0
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Xi bao yu fen zi mian yi xue za zhi = Chinese journal of cellular and molecular immunology
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