首页 > 最新文献

ACS Organic & Inorganic Au最新文献

英文 中文
The "Missing Link", Allostery and SynergismHosting of Metal Cations by Regular and Partial Cone Calix[4]arene Isomers. “缺失的一环”、变构和协同作用金属阳离子在规整和部分锥杯[4]芳烃异构体中的吸附。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-12 eCollection Date: 2026-02-04 DOI: 10.1021/acsorginorgau.5c00095
Matija Modrušan, Nikola Cindro, Marija Cvetnić, Andrea Usenik, Slavica Petrović, Jakov Borovec, Katarina Leko, Karla Kukina Gradečak, Vladimir Stilinović, Gordan Horvat, Tomica Hrenar, Josip Požar, Vladislav Tomišić

The influence of the tetra-O-2-oxopropyl-substituted calix-[4]-arene conformation on its binding affinity toward first- and second-group metal cations, as well as on the solvent molecule (acetonitrile or methanol) inclusion in the calixarene hydrophobic cavity, was investigated experimentally and computationally. Misorientation of one monomeric subunit in the partial cone ligand (L p ) led to incomplete cation desolvation and significantly reduced its cation-binding ability compared to the regular cone isomer (L c ). Aromatic ring inversion also precluded solvent inclusion in the calixarene basket of both free and complexed L p (in contrast to L c ), which considerably affected the complex stabilities and highlighted the pronounced cooperative allosteric effect of this process on the cation binding. Comprehensive structural and energetic studies, carried out by classical molecular dynamics simulations and quantum chemical calculations, showed that inclusion of acetonitrile within the complexes was favored over methanol, whereby the nitrile group of the solvent coordinated the second-group cations. Conversely, the methyl group of included acetonitrile or methanol molecule faced the alkali metal cations in the corresponding adducts. Molecular and crystal structures of free L p , as well as sodium, calcium, and barium complexes of L c with included acetonitrile, were determined by single-crystal X-ray diffraction. The orientations of solvent molecules within the calixarene cavity in the solid state closely matched computational predictions, further supporting conclusions drawn from the experimental data. Overall, this work presents a particularly detailed account of the thermodynamic and structural aspects of chelate, macrocyclic, and medium effects on the cation-hosting processes, providing valuable insights into the driving forces governing supramolecular recognition in solution.

通过实验和计算研究了四o -2-氧丙基取代杯芳烃构象对杯芳烃对第一和第二基团金属阳离子结合亲和力的影响,以及对杯芳烃疏水腔中溶剂分子(乙腈或甲醇)包合的影响。与常规锥形异构体(lc)相比,部分锥形配体(lp)中单个亚基的取向错误导致阳离子不完全脱溶,显著降低其阳离子结合能力。芳香环反转还阻止了游离和络合L - p的杯芳烃篮中的溶剂包合(与L - c相反),这极大地影响了配合物的稳定性,并突出了这一过程对阳离子结合的显著协同变构效应。通过经典分子动力学模拟和量子化学计算进行的综合结构和能量研究表明,配合物中乙腈比甲醇更有利于包裹,其中溶剂的腈基配位了第二基阳离子。相反,所含乙腈或甲醇分子的甲基面对相应加合物中的碱金属阳离子。用单晶x射线衍射法测定了游离L - p的分子和晶体结构,以及L - p与乙腈的钠、钙、钡配合物的结构。固态杯芳烃腔内溶剂分子的取向与计算预测非常吻合,进一步支持了从实验数据中得出的结论。总的来说,这项工作对螯合物、大环和介质对阳离子承载过程的影响的热力学和结构方面进行了特别详细的描述,为控制溶液中超分子识别的驱动力提供了有价值的见解。
{"title":"The \"Missing Link\", Allostery and SynergismHosting of Metal Cations by Regular and Partial <i>Cone</i> Calix[4]arene Isomers.","authors":"Matija Modrušan, Nikola Cindro, Marija Cvetnić, Andrea Usenik, Slavica Petrović, Jakov Borovec, Katarina Leko, Karla Kukina Gradečak, Vladimir Stilinović, Gordan Horvat, Tomica Hrenar, Josip Požar, Vladislav Tomišić","doi":"10.1021/acsorginorgau.5c00095","DOIUrl":"https://doi.org/10.1021/acsorginorgau.5c00095","url":null,"abstract":"<p><p>The influence of the tetra-<i>O</i>-2-oxopropyl-substituted calix-[4]-arene conformation on its binding affinity toward first- and second-group metal cations, as well as on the solvent molecule (acetonitrile or methanol) inclusion in the calixarene hydrophobic cavity, was investigated experimentally and computationally. Misorientation of one monomeric subunit in the partial <i>cone</i> ligand (<b>L</b> <sub><b>p</b></sub> ) led to incomplete cation desolvation and significantly reduced its cation-binding ability compared to the regular <i>cone</i> isomer (<b>L</b> <sub><b>c</b></sub> ). Aromatic ring inversion also precluded solvent inclusion in the calixarene <i>basket</i> of both free and complexed <b>L</b> <sub><b>p</b></sub> (in contrast to <b>L</b> <sub><b>c</b></sub> ), which considerably affected the complex stabilities and highlighted the pronounced cooperative allosteric effect of this process on the cation binding. Comprehensive structural and energetic studies, carried out by classical molecular dynamics simulations and quantum chemical calculations, showed that inclusion of acetonitrile within the complexes was favored over methanol, whereby the nitrile group of the solvent coordinated the second-group cations. Conversely, the methyl group of included acetonitrile or methanol molecule faced the alkali metal cations in the corresponding adducts. Molecular and crystal structures of free <b>L</b> <sub><b>p</b></sub> , as well as sodium, calcium, and barium complexes of <b>L</b> <sub><b>c</b></sub> with included acetonitrile, were determined by single-crystal X-ray diffraction. The orientations of solvent molecules within the calixarene cavity in the solid state closely matched computational predictions, further supporting conclusions drawn from the experimental data. Overall, this work presents a particularly detailed account of the thermodynamic and structural aspects of chelate, macrocyclic, and medium effects on the cation-hosting processes, providing valuable insights into the driving forces governing supramolecular recognition in solution.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"6 1","pages":"88-103"},"PeriodicalIF":3.3,"publicationDate":"2025-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12879178/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143532","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rotational Behavior in Piano Stool Ru(II) Complexes with Bulky-Substituted Cyclopentadienyl Ligands. 含大取代环戊二烯配体的钢琴凳Ru(II)配合物的旋转行为。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-06 eCollection Date: 2026-02-04 DOI: 10.1021/acsorginorgau.5c00100
Naoki Ito, Toshio Nishino, Jérôme Cuny, Shohei Katao, Kazuma Yasuhara, Gwénaël Rapenne

In this study, we designed and synthesized a series of novel piano stool ruthenium complexes featuring bulky substituents on the cyclopentadienyl (Cp) ligand to investigate how the substituent structure affects rotational behavior around the Cp-Ru bond. Substituents, including m-xylyl, mesityl, and 9-anthracenyl groups, were introduced to create steric hindrance with the tripodal ligand to increase the rotational barrier. NMR spectroscopy revealed that the Cp-Ru bond in the complex with the m-xylyl group rotated faster than the NMR time scale, whereas complexes bearing mesityl and 9-anthracenyl groups exhibited slower rotation. Variable-temperature NMR measurements and line shape fitting analysis showed that the activation free energy (ΔG ) required for the Cp ligand rotation by overcoming the steric hindrance between the substituent and tripodal ligand was significantly higher for the mesityl (69.5 kJ mol-1) and 9-anthracenyl (67.8 kJ mol-1) complexes compared to the previously reported pentaphenyl Cp complex (18.9 kJ mol-1). The results indicate that the activation enthalpy is the primary contributor to the overall activation energy, suggesting that the bulky substituents increase the rotational barrier by occupying the spatial gap between the pyrazole rings of the tripodal ligand. This is confirmed by theoretical calculations and the characterization of the minimum energy paths and transition states for each species. These findings offer valuable guidance for the molecular design of STM-operable molecular motors that can function at or near ambient temperature instead of the typical extremely low-temperature conditions necessary to suppress random molecular motion caused by thermal excitation.

在这项研究中,我们设计并合成了一系列具有环戊二烯基(Cp)配体上大体积取代基的新型钢琴凳钌配合物,以研究取代基结构如何影响Cp- ru键周围的旋转行为。引入取代基,包括间二基、甲酰基和9-蒽基,与三足配体形成空间位阻,以增加旋转势垒。核磁共振光谱结果表明,含间基配合物的Cp-Ru键的旋转速度快于核磁共振时间尺度,而含甲酰基和9-蒽基配合物的旋转速度较慢。变温核磁共振测量和线形拟合分析表明,甲酰基(69.5 kJ mol-1)和9-蒽基(67.8 kJ mol-1)配合物通过克服取代基和三脚配体之间的位阻旋转所需的激活自由能(ΔG⧧)明显高于先前报道的五苯基Cp配合物(18.9 kJ mol-1)。结果表明,激活焓是总活化能的主要贡献因素,表明体积较大的取代基通过占据三足配体吡唑环之间的空间间隙来增加旋转势垒。理论计算和每个物种的最小能量路径和过渡态的表征证实了这一点。这些发现为stm可操作的分子马达的分子设计提供了有价值的指导,这些马达可以在环境温度或接近环境温度下工作,而不是在典型的极低温条件下抑制由热激发引起的随机分子运动。
{"title":"Rotational Behavior in Piano Stool Ru(II) Complexes with Bulky-Substituted Cyclopentadienyl Ligands.","authors":"Naoki Ito, Toshio Nishino, Jérôme Cuny, Shohei Katao, Kazuma Yasuhara, Gwénaël Rapenne","doi":"10.1021/acsorginorgau.5c00100","DOIUrl":"https://doi.org/10.1021/acsorginorgau.5c00100","url":null,"abstract":"<p><p>In this study, we designed and synthesized a series of novel piano stool ruthenium complexes featuring bulky substituents on the cyclopentadienyl (Cp) ligand to investigate how the substituent structure affects rotational behavior around the Cp-Ru bond. Substituents, including <i>m</i>-xylyl, mesityl, and 9-anthracenyl groups, were introduced to create steric hindrance with the tripodal ligand to increase the rotational barrier. NMR spectroscopy revealed that the Cp-Ru bond in the complex with the <i>m</i>-xylyl group rotated faster than the NMR time scale, whereas complexes bearing mesityl and 9-anthracenyl groups exhibited slower rotation. Variable-temperature NMR measurements and line shape fitting analysis showed that the activation free energy (Δ<i>G</i> <sup>⧧</sup>) required for the Cp ligand rotation by overcoming the steric hindrance between the substituent and tripodal ligand was significantly higher for the mesityl (69.5 kJ mol<sup>-1</sup>) and 9-anthracenyl (67.8 kJ mol<sup>-1</sup>) complexes compared to the previously reported pentaphenyl Cp complex (18.9 kJ mol<sup>-1</sup>). The results indicate that the activation enthalpy is the primary contributor to the overall activation energy, suggesting that the bulky substituents increase the rotational barrier by occupying the spatial gap between the pyrazole rings of the tripodal ligand. This is confirmed by theoretical calculations and the characterization of the minimum energy paths and transition states for each species. These findings offer valuable guidance for the molecular design of STM-operable molecular motors that can function at or near ambient temperature instead of the typical extremely low-temperature conditions necessary to suppress random molecular motion caused by thermal excitation.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"6 1","pages":"139-148"},"PeriodicalIF":3.3,"publicationDate":"2025-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12879173/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143545","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Combined Role of Silanols and Oxidative Stress in Determining Engineered Stone Dust Toxicity. 硅烷醇和氧化应激在决定工程石尘毒性中的联合作用。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-11-05 eCollection Date: 2026-02-04 DOI: 10.1021/acsorginorgau.5c00089
Cristina Pavan, Marianna Fimiani, Stefania Cananà, Aleandro Diana, Matteo Marafante, Stefano Bertinetti, Guillermo Escolano-Casado, Lorenzo Mino, Dino Pisaniello, Riccardo Leinardi, Maura Tomatis, Francesco Turci

Engineered stone (ES) silicosis is emerging as a global occupational health crisis, caused by exposure to respirable particles generated during the processing of ES composite materials. ES composites comprise crystalline silica (predominantly quartz), inorganic aggregates, polymeric resins, and pigments. The severity of lung disease in workers contrasts with the modest effects observed in short-term in vitro studies, exposing a critical gap in our mechanistic understanding of ES dust toxicity. In this work, we examined the surface chemistry and reactivity of ES dust obtained from a slab with high crystalline silica content, before and after incubation (up to two months) in simulated lung fluids: artificial lysosomal fluid (ALF, pH ∼ 4.5) and lung lining fluid simulant (Gamble's solution, GS, pH ∼ 7.4). Damage to model membranes (red blood cell, RBC), an initiating event in ES-induced toxicity, was quantified by membranolytic assay. Pristine ES dust was negligibly membranolytic. Incubation in ALF markedly increased ES membranolytic activity, correlating with partial degradation of the resin. A complete removal of the resin produced a dust with further enhanced activity, associated with the exposure of nearly free silanol (NFS) groups, a recognized molecular trigger of quartz toxicity. NFS were detected by infrared spectroscopy after H/D isotopic exchange. ALF incubation also led to substantial release of transition metal ions, which catalyzed the formation of hydroxyl and carboxyl radicals, detected by EPR spectroscopy. In contrast, GS exposure resulted in minimal membranolytic activity and low radical generation. Our findings suggest that prolonged residence of ES dust in lung cellular environments, particularly lysosomes, promotes resin degradation, exposes reactive silanols, and releases transition metal ions, thereby imparting both membranolytic and oxidative potential. This work provides new molecular insight into ES dust toxicity, emphasizes the urgency of safer occupational practices, and paves the way to safe-by-design strategies for future composite materials.

工程石(ES)矽肺病正在成为一种全球性的职业健康危机,由暴露于加工ES复合材料过程中产生的可吸入颗粒引起。ES复合材料包括结晶二氧化硅(主要是石英)、无机聚集体、聚合树脂和颜料。工人肺部疾病的严重程度与短期体外研究中观察到的适度影响形成对比,暴露了我们对ES粉尘毒性的机制理解的关键差距。在这项工作中,我们检测了在模拟肺液(人工溶酶体液(ALF, pH ~ 4.5)和肺衬里模拟液(甘伯溶液,GS, pH ~ 7.4)中孵育前后(长达两个月)从高结晶二氧化硅含量的平板中获得的ES粉尘的表面化学和反应性。模型膜(红细胞,RBC)损伤是es诱导毒性的起始事件,通过膜溶法定量。原始ES粉尘的膜分解作用可忽略不计。在ALF中孵育显著增加ES的膜分解活性,这与树脂的部分降解有关。完全去除树脂产生的粉尘具有进一步增强的活性,与暴露于几乎游离的硅烷醇(NFS)基团有关,这是公认的石英毒性的分子触发器。H/D同位素交换后用红外光谱法检测了NFS。通过EPR光谱检测,ALF孵育还导致过渡金属离子的大量释放,从而催化羟基和羧基自由基的形成。相比之下,GS暴露导致最小的膜分解活性和低自由基生成。我们的研究结果表明,ES粉尘在肺细胞环境,特别是溶酶体中的长期驻留,促进了树脂降解,暴露了活性硅烷醇,释放了过渡金属离子,从而赋予了膜分解和氧化电位。这项工作为ES粉尘毒性提供了新的分子视角,强调了更安全的职业实践的紧迫性,并为未来复合材料的安全设计策略铺平了道路。
{"title":"The Combined Role of Silanols and Oxidative Stress in Determining Engineered Stone Dust Toxicity.","authors":"Cristina Pavan, Marianna Fimiani, Stefania Cananà, Aleandro Diana, Matteo Marafante, Stefano Bertinetti, Guillermo Escolano-Casado, Lorenzo Mino, Dino Pisaniello, Riccardo Leinardi, Maura Tomatis, Francesco Turci","doi":"10.1021/acsorginorgau.5c00089","DOIUrl":"https://doi.org/10.1021/acsorginorgau.5c00089","url":null,"abstract":"<p><p>Engineered stone (ES) silicosis is emerging as a global occupational health crisis, caused by exposure to respirable particles generated during the processing of ES composite materials. ES composites comprise crystalline silica (predominantly quartz), inorganic aggregates, polymeric resins, and pigments. The severity of lung disease in workers contrasts with the modest effects observed in short-term in vitro studies, exposing a critical gap in our mechanistic understanding of ES dust toxicity. In this work, we examined the surface chemistry and reactivity of ES dust obtained from a slab with high crystalline silica content, before and after incubation (up to two months) in simulated lung fluids: artificial lysosomal fluid (ALF, pH ∼ 4.5) and lung lining fluid simulant (Gamble's solution, GS, pH ∼ 7.4). Damage to model membranes (red blood cell, RBC), an initiating event in ES-induced toxicity, was quantified by membranolytic assay. Pristine ES dust was negligibly membranolytic. Incubation in ALF markedly increased ES membranolytic activity, correlating with partial degradation of the resin. A complete removal of the resin produced a dust with further enhanced activity, associated with the exposure of nearly free silanol (NFS) groups, a recognized molecular trigger of quartz toxicity. NFS were detected by infrared spectroscopy after H/D isotopic exchange. ALF incubation also led to substantial release of transition metal ions, which catalyzed the formation of hydroxyl and carboxyl radicals, detected by EPR spectroscopy. In contrast, GS exposure resulted in minimal membranolytic activity and low radical generation. Our findings suggest that prolonged residence of ES dust in lung cellular environments, particularly lysosomes, promotes resin degradation, exposes reactive silanols, and releases transition metal ions, thereby imparting both membranolytic and oxidative potential. This work provides new molecular insight into ES dust toxicity, emphasizes the urgency of safer occupational practices, and paves the way to safe-by-design strategies for future composite materials.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"6 1","pages":"76-87"},"PeriodicalIF":3.3,"publicationDate":"2025-11-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12879171/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143632","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Silver-Catalyzed C(sp3)-H Functionalization. 银催化的C(sp3)-H功能化。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-10-31 eCollection Date: 2026-02-04 DOI: 10.1021/acsorginorgau.5c00104
Masoud Sadeghi

Silver catalysis has emerged as a versatile tool for C-(sp3)-H bond functionalization, offering unique opportunities to transform simple hydrocarbons into valuable products. Both activated and unactivated C-(sp3)-H bonds have been investigated in recent years. However, most studies have focused on activated bonds. In these protocols, in situ generation of nitrene intermediates has dominated the field, enabling efficient and selective C-(sp3)-H bond transformations. These reports demonstrate that ligand design, in addition to the nature of the silver catalyst, plays a crucial role in achieving chemo-, site-, and even stereoselectivity. During the past decade, silver-catalyzed functionalization has been used for the conversion of C-(sp3)-H bonds into C-C, C-N, C-O, and C-X (X = halogen) bonds. These protocols have shown that Ag-(I) combined with suitable oxidants can be used as a powerful synthetic tool for the functionalization of specific C-(sp3)-H bonds into desired C-Z bonds. This review highlights the advances and limitations in silver-catalyzed C-(sp3)-H functionalization that have been reported during the past decade.

银催化已成为C-(sp3)-氢键功能化的通用工具,为将简单的碳氢化合物转化为有价值的产品提供了独特的机会。近年来对活化和未活化的C-(sp3)- h键进行了研究。然而,大多数研究都集中在活化键上。在这些方案中,原位生成亚硝基中间体已经主导了该领域,实现了高效和选择性的C-(sp3)-氢键转化。这些报告表明,配体设计,除了银催化剂的性质,在实现化学选择性、位点选择性甚至立体选择性方面起着至关重要的作用。在过去的十年中,银催化功能化已被用于将C-(sp3)- h键转化为C-C, C- n, C- o和C-X (X =卤素)键。这些实验表明,Ag-(I)与合适的氧化剂结合可以作为一种强大的合成工具,将特定的C-(sp3)- h键功能化成所需的C- z键。本文综述了近十年来银催化C-(sp3)- h功能化研究的进展和局限性。
{"title":"Silver-Catalyzed C(sp<sup>3</sup>)-H Functionalization.","authors":"Masoud Sadeghi","doi":"10.1021/acsorginorgau.5c00104","DOIUrl":"https://doi.org/10.1021/acsorginorgau.5c00104","url":null,"abstract":"<p><p>Silver catalysis has emerged as a versatile tool for C-(sp<sup>3</sup>)-H bond functionalization, offering unique opportunities to transform simple hydrocarbons into valuable products. Both activated and unactivated C-(sp<sup>3</sup>)-H bonds have been investigated in recent years. However, most studies have focused on activated bonds. In these protocols, in situ generation of nitrene intermediates has dominated the field, enabling efficient and selective C-(sp<sup>3</sup>)-H bond transformations. These reports demonstrate that ligand design, in addition to the nature of the silver catalyst, plays a crucial role in achieving chemo-, site-, and even stereoselectivity. During the past decade, silver-catalyzed functionalization has been used for the conversion of C-(sp<sup>3</sup>)-H bonds into C-C, C-N, C-O, and C-X (X = halogen) bonds. These protocols have shown that Ag-(I) combined with suitable oxidants can be used as a powerful synthetic tool for the functionalization of specific C-(sp<sup>3</sup>)-H bonds into desired C-Z bonds. This review highlights the advances and limitations in silver-catalyzed C-(sp<sup>3</sup>)-H functionalization that have been reported during the past decade.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"6 1","pages":"23-40"},"PeriodicalIF":3.3,"publicationDate":"2025-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12879210/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143550","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Modeling 2D van der Waals Materials with Homonuclear Bonds of Main Group Cations. 具有主基团阳离子同核键的二维范德华材料的建模。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-10-27 eCollection Date: 2026-02-04 DOI: 10.1021/acsorginorgau.5c00096
Peng Yan, Anthony A Casale, Joseph W Bennett

We survey a range of 2D van der Waals (vdW) layered materials that contain homonuclear bonds of main group elements, specifically Ga-Ga, In-In, Si-Si, Ge-Ge, and P-P, using first-principles density functional theory (DFT) methods. The covalent bonding and geometries present in these materials can stabilize oxidation states that differ from those found in conventional semiconductors composed of main group elements, such as Si, InP, and GaAs. Since 2D vdW materials did not gain widespread use until recently, many have been excluded from the first-principles test sets developed over a decade prior, where the focus was on determining the accuracy of potentials used in different modeling methods. In this study, we benchmark the set by exploring a range of modeling methods that include GGA and meta-GGA exchange-correlation functionals commonly used in first-principles DFT methods, as well as exact exchange introduced using HSE06 and PBE0. We investigate their effects on the ground-state structure, electronic band structure, and computational cost and report on this benchmarking data. Our test set of 2D vdW materials contains multiple structural types that span binary, ternary, and quaternary compositions, including ferroic ground states. We found that the vdW-corrected GGA is capable of accurately capturing lattice constants (within ±2% relative to available experimental data) across various 2D vdW materials in our test set, with relatively low computational cost and turn-key compatibility with the open-source code Quantum Espresso. Additionally, vdW-corrected GGA can reliably identify stable ferroelectric and ferromagnetic ground states, can be used to determine trends in electronic band structure, and serve as a starting point for predicting more accurate band gaps. The predicted electronic band structure and corresponding projected density of states (PDOS) are crucial for establishing the connection between microscopic properties and atomic or molecular orbitals, which can, in turn, be used to predict novel functional 2D vdW materials.

我们使用第一性原理密度泛函理论(DFT)方法研究了一系列含有主族元素同核键的二维范德华(vdW)层状材料,特别是Ga-Ga, In-In, Si-Si, Ge-Ge和P-P。这些材料中存在的共价键和几何形状可以稳定氧化态,这与传统的由主要族元素(如Si, InP和GaAs)组成的半导体不同。由于2D vdW材料直到最近才得到广泛使用,许多材料被排除在十多年前开发的第一原理测试集之外,其中的重点是确定不同建模方法中使用的电位的准确性。在本研究中,我们通过探索一系列建模方法对该集合进行基准测试,这些建模方法包括第一原理DFT方法中常用的GGA和meta-GGA交换相关函数,以及使用HSE06和PBE0引入的精确交换。我们研究了它们对基态结构、电子能带结构和计算成本的影响,并报告了这些基准数据。我们的2D vdW材料测试集包含多种结构类型,包括二元,三元和四元成分,包括铁基态。我们发现,在我们的测试集中,vdW校正的GGA能够准确地捕获各种2D vdW材料的晶格常数(相对于可用实验数据在±2%以内),计算成本相对较低,并且与开源代码Quantum Espresso完全兼容。此外,vdw校正的GGA可以可靠地识别稳定的铁电基态和铁磁基态,可用于确定电子能带结构的趋势,并作为预测更准确带隙的起点。预测的电子能带结构和相应的投影态密度(PDOS)对于建立微观性质与原子或分子轨道之间的联系至关重要,这反过来又可以用于预测新型功能二维vdW材料。
{"title":"Modeling 2D van der Waals Materials with Homonuclear Bonds of Main Group Cations.","authors":"Peng Yan, Anthony A Casale, Joseph W Bennett","doi":"10.1021/acsorginorgau.5c00096","DOIUrl":"https://doi.org/10.1021/acsorginorgau.5c00096","url":null,"abstract":"<p><p>We survey a range of 2D van der Waals (vdW) layered materials that contain homonuclear bonds of main group elements, specifically Ga-Ga, In-In, Si-Si, Ge-Ge, and P-P, using first-principles density functional theory (DFT) methods. The covalent bonding and geometries present in these materials can stabilize oxidation states that differ from those found in conventional semiconductors composed of main group elements, such as Si, InP, and GaAs. Since 2D vdW materials did not gain widespread use until recently, many have been excluded from the first-principles test sets developed over a decade prior, where the focus was on determining the accuracy of potentials used in different modeling methods. In this study, we benchmark the set by exploring a range of modeling methods that include GGA and meta-GGA exchange-correlation functionals commonly used in first-principles DFT methods, as well as exact exchange introduced using HSE06 and PBE0. We investigate their effects on the ground-state structure, electronic band structure, and computational cost and report on this benchmarking data. Our test set of 2D vdW materials contains multiple structural types that span binary, ternary, and quaternary compositions, including ferroic ground states. We found that the vdW-corrected GGA is capable of accurately capturing lattice constants (within ±2% relative to available experimental data) across various 2D vdW materials in our test set, with relatively low computational cost and turn-key compatibility with the open-source code Quantum Espresso. Additionally, vdW-corrected GGA can reliably identify stable ferroelectric and ferromagnetic ground states, can be used to determine trends in electronic band structure, and serve as a starting point for predicting more accurate band gaps. The predicted electronic band structure and corresponding projected density of states (PDOS) are crucial for establishing the connection between microscopic properties and atomic or molecular orbitals, which can, in turn, be used to predict novel functional 2D vdW materials.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"6 1","pages":"104-118"},"PeriodicalIF":3.3,"publicationDate":"2025-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12879168/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146143507","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Role of Propionate Side Chain in Heme-Containing Metalloenzymes. 丙酸侧链在含血红素金属酶中的作用。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-10-15 eCollection Date: 2025-12-03 DOI: 10.1021/acsorginorgau.5c00078
Dinesh Singh, Vandana Kardam, Kshatresh Dutta Dubey

Propionate side chains are essential structural components of porphyrin-based metalloenzymes. While numerous studies have investigated the functional significance of propionate side chains from various perspectives, comprehensive reviews focusing specifically on their roles in catalytic mechanisms remain scarce. Traditionally, the role of propionate has been limited to substrate binding and heme stabilization; however, emerging evidence from studies published particularly after 2005 highlights its involvement in a range of noncanonical functions, including water gating, oxidant formation, and electron transfer. This review aims to bridge the gap in existing literature by systematically discussing these expanded roles and emphasizing the broader mechanistic importance of propionate side chains in metalloenzymes, particularly the iron-containing enzymes.

丙酸侧链是卟啉类金属酶的重要结构成分。虽然许多研究从不同的角度研究了丙酸侧链的功能意义,但专门针对其在催化机制中的作用的综合综述仍然很少。传统上,丙酸盐的作用仅限于底物结合和血红素稳定;然而,2005年以后发表的新研究表明,它参与了一系列非规范功能,包括水闸、氧化剂形成和电子转移。本综述旨在通过系统地讨论这些扩展的作用,并强调丙酸侧链在金属酶,特别是含铁酶中的更广泛的机制重要性,从而弥补现有文献的空白。
{"title":"Role of Propionate Side Chain in Heme-Containing Metalloenzymes.","authors":"Dinesh Singh, Vandana Kardam, Kshatresh Dutta Dubey","doi":"10.1021/acsorginorgau.5c00078","DOIUrl":"10.1021/acsorginorgau.5c00078","url":null,"abstract":"<p><p>Propionate side chains are essential structural components of porphyrin-based metalloenzymes. While numerous studies have investigated the functional significance of propionate side chains from various perspectives, comprehensive reviews focusing specifically on their roles in catalytic mechanisms remain scarce. Traditionally, the role of propionate has been limited to substrate binding and heme stabilization; however, emerging evidence from studies published particularly after 2005 highlights its involvement in a range of noncanonical functions, including water gating, oxidant formation, and electron transfer. This review aims to bridge the gap in existing literature by systematically discussing these expanded roles and emphasizing the broader mechanistic importance of propionate side chains in metalloenzymes, particularly the iron-containing enzymes.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"5 6","pages":"451-466"},"PeriodicalIF":3.3,"publicationDate":"2025-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12679310/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145701858","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recent Advances in C-H Perfluoroalkyl Thiolation and Perfluoroalkyl Sulfonylation. C-H全氟烷基硫代化和全氟烷基磺酰化研究进展。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-10-13 eCollection Date: 2025-12-03 DOI: 10.1021/acsorginorgau.5c00094
Sichang Wang, Liying Zhang, Fei Hong, Weichao Du, Congyu Ke, Jie-Ping Wan

This review comprehensively summarizes the recent advances in the direct C-H perfluoroalkyl thiolation and perfluoroalkyl sulfonylation, focusing on the incorporation of -SCF3 and -SO2CF3 motifs. Due to their exceptional lipophilicity, electron-withdrawing nature, and metabolic stability, these fluorine-containing groups are highly valuable in pharmaceutical, agrochemical, and material sciences. The contents of this review are systematically organized according to the hybridization of the central carbon atom (sp, sp2, sp3) and cover both transition-metal-catalyzed and transition metal-free methodologies. Key developments in electrophilic trifluoromethylthiolating reagents, such as hypervalent iodine compounds, N-trifluoromethylthiosaccharin, and related derivatives, are highlighted. The mechanism, scope, limitation, and application of typical reactions are discussed, emphasizing strategies to overcome challenges in regioselectivity and functional group compatibility. The review also explores emerging trends in photocatalytic, electrochemical, and dual catalytic systems, underscoring the move toward more sustainable and efficient synthetic routes. Finally, future perspectives and potential applications in the synthesis of bioactive molecules and functional materials are discussed.

本文综述了直接C-H全氟烷基硫基化和全氟烷基磺酰化的最新进展,重点介绍了-SCF3和-SO2CF3基序的掺入。由于其特殊的亲脂性、吸电子性质和代谢稳定性,这些含氟基团在制药、农用化学和材料科学中具有很高的价值。本文按照中心碳原子(sp, sp2, sp3)的杂化方式进行了系统的整理,涵盖了过渡金属催化和无过渡金属的杂化方法。重点介绍了亲电性三氟甲基硫化试剂的主要发展,如高价碘化合物、n -三氟甲基硫糖和相关衍生物。讨论了典型反应的机理、范围、局限性和应用,强调了克服区域选择性和官能团相容性挑战的策略。综述还探讨了光催化、电化学和双催化系统的新趋势,强调了朝着更可持续和高效的合成路线的发展。最后,对其在生物活性分子和功能材料合成中的应用前景进行了展望。
{"title":"Recent Advances in C-H Perfluoroalkyl Thiolation and Perfluoroalkyl Sulfonylation.","authors":"Sichang Wang, Liying Zhang, Fei Hong, Weichao Du, Congyu Ke, Jie-Ping Wan","doi":"10.1021/acsorginorgau.5c00094","DOIUrl":"10.1021/acsorginorgau.5c00094","url":null,"abstract":"<p><p>This review comprehensively summarizes the recent advances in the direct C-H perfluoroalkyl thiolation and perfluoroalkyl sulfonylation, focusing on the incorporation of -SCF<sub>3</sub> and -SO<sub>2</sub>CF<sub>3</sub> motifs. Due to their exceptional lipophilicity, electron-withdrawing nature, and metabolic stability, these fluorine-containing groups are highly valuable in pharmaceutical, agrochemical, and material sciences. The contents of this review are systematically organized according to the hybridization of the central carbon atom (sp, sp<sup>2</sup>, sp<sup>3</sup>) and cover both transition-metal-catalyzed and transition metal-free methodologies. Key developments in electrophilic trifluoromethylthiolating reagents, such as hypervalent iodine compounds, <i>N</i>-trifluoromethylthiosaccharin, and related derivatives, are highlighted. The mechanism, scope, limitation, and application of typical reactions are discussed, emphasizing strategies to overcome challenges in regioselectivity and functional group compatibility. The review also explores emerging trends in photocatalytic, electrochemical, and dual catalytic systems, underscoring the move toward more sustainable and efficient synthetic routes. Finally, future perspectives and potential applications in the synthesis of bioactive molecules and functional materials are discussed.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"5 6","pages":"467-484"},"PeriodicalIF":3.3,"publicationDate":"2025-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12679318/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145701826","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis and Electronic Structure of a Tetraazanaphthalene Radical-Bridged Yttrium Complex. 四氮杂萘自由基桥接钇配合物的合成及电子结构。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-10-09 eCollection Date: 2025-12-03 DOI: 10.1021/acsorginorgau.5c00086
Saroshan Deshapriya, Selvan Demir

Taming radical anions with highly electropositive metal ions poses a grand synthetic challenge owing to the high reactivity of such compounds originating from the unpaired electron. A successful synthetic metal radical match elicits a desire to thoroughly understand the electronic structure of a given metal radical pairing, which may inform about the potential physical properties pertaining to spintronics and magnetism relevant for future technologies. Here, the 1,4,5,8-tetraazanaphthalene (tan) ligand was utilized in the synthesis of (Cp*2Y)2(μ-tan), 1, using the doubly reduced version K2tan and Cp*2Y-(BPh4) following a salt metathesis reaction. Chemical oxidation of 1 yielded [(Cp*2Y)2(μ-tan)]-[BArF20], 2, containing a tan-• radical anion. 2 constitutes the first d-block coordination compound bearing a tan radical. 1 and 2 were studied through X-ray crystallography, electrochemistry, and spectroscopy. The radical nature of 2 was uncovered by cw-EPR spectroscopy and density functional theory (DFT) computations. All findings suggest major changes in the spin and charge distributions of this organic radical ligand when it is metalated. In fact, the results demonstrate that the tan-• radical is more stable when coordinated to a transition metal than in its free nature, and thus, this insight is relevant for the development of future spintronic technologies.

用高正电性的金属离子来驯服自由基阴离子是一项巨大的合成挑战,因为这类化合物的非成对电子具有很高的反应性。成功的合成金属自由基匹配引发了人们对彻底理解给定金属自由基配对的电子结构的愿望,这可能会为未来技术提供与自旋电子学和磁学相关的潜在物理性质的信息。本研究利用1,4,5,8-四氮杂萘(tan)配体在盐还原反应后,以双还原版K2tan和Cp*2Y-(BPh4)合成(Cp*2Y)2(μ-tan), 1。化学氧化得到[(Cp*2Y)2(μ-tan•)]-[BArF20], 2,含有一个tan•自由基阴离子。2构成含tan自由基的第一d-嵌段配位化合物。通过x射线晶体学、电化学和光谱学对1和2进行了研究。通过w- epr光谱和密度泛函理论(DFT)计算揭示了2的自由基性质。所有的研究结果都表明,当金属化时,这种有机自由基配体的自旋和电荷分布发生了重大变化。事实上,结果表明,当与过渡金属配合时,tan-•自由基比其自由性质更稳定,因此,这一见解与未来自旋电子技术的发展有关。
{"title":"Synthesis and Electronic Structure of a Tetraazanaphthalene Radical-Bridged Yttrium Complex.","authors":"Saroshan Deshapriya, Selvan Demir","doi":"10.1021/acsorginorgau.5c00086","DOIUrl":"10.1021/acsorginorgau.5c00086","url":null,"abstract":"<p><p>Taming radical anions with highly electropositive metal ions poses a grand synthetic challenge owing to the high reactivity of such compounds originating from the unpaired electron. A successful synthetic metal radical match elicits a desire to thoroughly understand the electronic structure of a given metal radical pairing, which may inform about the potential physical properties pertaining to spintronics and magnetism relevant for future technologies. Here, the 1,4,5,8-tetraazanaphthalene (tan) ligand was utilized in the synthesis of (Cp*<sub>2</sub>Y)<sub>2</sub>(μ-tan), <b>1</b>, using the doubly reduced version K<sub>2</sub>tan and Cp*<sub>2</sub>Y-(BPh<sub>4</sub>) following a salt metathesis reaction. Chemical oxidation of <b>1</b> yielded [(Cp*<sub>2</sub>Y)<sub>2</sub>(μ-tan<sup>•</sup>)]-[BArF<sub>20</sub>], <b>2</b>, containing a tan<sup>-•</sup> radical anion. <b>2</b> constitutes the first <i>d</i>-block coordination compound bearing a tan radical. <b>1</b> and <b>2</b> were studied through X-ray crystallography, electrochemistry, and spectroscopy. The radical nature of <b>2</b> was uncovered by cw-EPR spectroscopy and density functional theory (DFT) computations. All findings suggest major changes in the spin and charge distributions of this organic radical ligand when it is metalated. In fact, the results demonstrate that the tan<sup>-•</sup> radical is more stable when coordinated to a transition metal than in its free nature, and thus, this insight is relevant for the development of future spintronic technologies.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"5 6","pages":"557-566"},"PeriodicalIF":3.3,"publicationDate":"2025-10-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12679307/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145702146","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Co3O4‑Promoted Cerium Oxide Catalyst for Efficient Catalytic N‑Alkylation of Amines with Alcohols. Co3O4促进的氧化铈催化剂用于胺与醇的高效N -烷基化催化。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-10-08 eCollection Date: 2025-12-03 DOI: 10.1021/acsorginorgau.5c00069
Jianyao Kou, Guangyao Yang, Zhixin Yu, Jiachao Liu, Yuhang Xu, Zhuo Xin, Yuxing Huang

The use of heterogeneous catalysts to generate amine compounds through anaerobic N-alkylation of alcohols via hydrogen transfer strategy is a highly promising synthetic strategy, as it can construct C-N bonds under relatively mild and green conditions. Moreover, amine compounds are widely used in the synthesis of pharmaceutical intermediates, agriculture and fine chemicals. In this work, we successfully constructed a novel Co3O4/CeO2 catalyst using the hydrothermal synthesis method and applied it to the N-alkylation reaction of alcohols, achieving up to 99% of the target product yield with broad substrate scope and high catalyst stability. The Ce3+/Ce4+ redox pairs and oxygen vacancies in the CeO2 support with highly dispersed Co species synergistically catalyze the hydrogen borrowing process of alcohols and amines to generate secondary amines with high activity and selectivity.

利用多相催化剂通过氢转移策略对醇进行厌氧n -烷基化反应生成胺类化合物是一种非常有前途的合成策略,因为它可以在相对温和和绿色的条件下构建C-N键。此外,胺类化合物还广泛应用于医药中间体、农业和精细化学品的合成。本研究成功构建了一种新型的水热合成Co3O4/CeO2催化剂,并将其应用于醇类n -烷基化反应中,目标产物收率高达99%,且底物范围广,催化剂稳定性高。Ce3+/Ce4+氧化还原对和高度分散Co的CeO2载体上的氧空位协同催化醇和胺的借氢过程,生成具有高活性和选择性的仲胺。
{"title":"Co<sub>3</sub>O<sub>4</sub>‑Promoted Cerium Oxide Catalyst for Efficient Catalytic <i>N</i>‑Alkylation of Amines with Alcohols.","authors":"Jianyao Kou, Guangyao Yang, Zhixin Yu, Jiachao Liu, Yuhang Xu, Zhuo Xin, Yuxing Huang","doi":"10.1021/acsorginorgau.5c00069","DOIUrl":"10.1021/acsorginorgau.5c00069","url":null,"abstract":"<p><p>The use of heterogeneous catalysts to generate amine compounds through anaerobic <i>N</i>-alkylation of alcohols via hydrogen transfer strategy is a highly promising synthetic strategy, as it can construct C-N bonds under relatively mild and green conditions. Moreover, amine compounds are widely used in the synthesis of pharmaceutical intermediates, agriculture and fine chemicals. In this work, we successfully constructed a novel Co<sub>3</sub>O<sub>4</sub>/CeO<sub>2</sub> catalyst using the hydrothermal synthesis method and applied it to the <i>N</i>-alkylation reaction of alcohols, achieving up to 99% of the target product yield with broad substrate scope and high catalyst stability. The Ce<sup>3+</sup>/Ce<sup>4+</sup> redox pairs and oxygen vacancies in the CeO<sub>2</sub> support with highly dispersed Co species synergistically catalyze the hydrogen borrowing process of alcohols and amines to generate secondary amines with high activity and selectivity.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"5 6","pages":"498-506"},"PeriodicalIF":3.3,"publicationDate":"2025-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12679301/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145701713","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Guest-Induced Conformational Switching in "One Wall" Calix[4]pyrrole Cavitands Functionalized with an Inwardly Directed Carboxylic Acid. 内向羧酸功能化“一壁”杯形[4]吡咯空腔体的客体诱导构象转换。
IF 3.3 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-10-02 eCollection Date: 2025-12-03 DOI: 10.1021/acsorginorgau.5c00087
Mingkai Zhao, Andrés F Sierra, Gemma Aragay, Pablo Ballester

We report the design, synthesis, and conformational analysis of two aryl-extended calix[4]-pyrrole (AE-C[4]-P) cavitands that feature a single methylene bridge and an opposed aromatic bridging wall with an inward-facing carboxylic acid. Inspired by Rebek's introverted acid motif, these cavitands were developed to explore guest-induced conformational switching between "equatorial" and "axial" orientations of the bridging aromatic wall. Binding studies with N-oxide guests, capable of monotopic or ditopic hydrogen bonding, revealed that the nature of the bridging aromatic spacer critically governs the host behavior. The benzimidazole-based cavitand showed strong affinity for DABCO mono-N-oxide but resisted conformational change. In contrast, the quinoxaline-imidazole analogue underwent a solvent-dependent switch from "equatorial" to "axial" geometry upon binding 4-carboxy-pyridine-N-oxide guest. This switching is driven by the ditopic binding of the guest and stabilized by two intramolecular CH···lone pair interactions in the axial conformer of the complex. DFT calculations supported the experimental results. The reported findings highlight key structure-function relationships in calix[4]-pyrrole cavitands and establish a general strategy for designing guest-responsive molecular containers capable of conformational switching.

我们报道了两个芳基延伸杯[4]-吡咯(AE-C[4]-P)空腔体的设计、合成和构象分析,这些空腔体具有单个亚甲基桥和具有向内羧酸的相反芳香桥壁。受Rebek的内向酸基序的启发,这些空腔体被开发用于探索桥接芳香壁的“赤道”和“轴向”取向之间的客诱导构象转换。与n -氧化物客体的结合研究,能够进行单位或双位氢键,揭示了桥接芳香间隔物的性质对宿主行为的关键控制。以苯并咪唑为基础的空腔体对DABCO单n -氧化物具有较强的亲和性,但对构象变化具有抑制作用。相比之下,喹诺啉-咪唑类似物在结合4-羧基吡啶- n -氧化物客体时经历了从“赤道”到“轴向”的溶剂依赖转换。这种转换是由客体的双主题结合驱动的,并由络合物的轴向构象中的两个分子内CH···孤对相互作用稳定。DFT计算支持实验结果。这些研究结果强调了杯状[4]-吡咯空腔体中关键的结构-功能关系,并为设计具有构象切换功能的客响应分子容器建立了一般策略。
{"title":"Guest-Induced Conformational Switching in \"One Wall\" Calix[4]pyrrole Cavitands Functionalized with an Inwardly Directed Carboxylic Acid.","authors":"Mingkai Zhao, Andrés F Sierra, Gemma Aragay, Pablo Ballester","doi":"10.1021/acsorginorgau.5c00087","DOIUrl":"10.1021/acsorginorgau.5c00087","url":null,"abstract":"<p><p>We report the design, synthesis, and conformational analysis of two aryl-extended calix[4]-pyrrole (AE-C[4]-P) cavitands that feature a single methylene bridge and an opposed aromatic bridging wall with an inward-facing carboxylic acid. Inspired by Rebek's introverted acid motif, these cavitands were developed to explore guest-induced conformational switching between \"equatorial\" and \"axial\" orientations of the bridging aromatic wall. Binding studies with <i>N</i>-oxide guests, capable of monotopic or ditopic hydrogen bonding, revealed that the nature of the bridging aromatic spacer critically governs the host behavior. The benzimidazole-based cavitand showed strong affinity for DABCO mono-<i>N</i>-oxide but resisted conformational change. In contrast, the quinoxaline-imidazole analogue underwent a solvent-dependent switch from \"equatorial\" to \"axial\" geometry upon binding 4-carboxy-pyridine-<i>N</i>-oxide guest. This switching is driven by the ditopic binding of the guest and stabilized by two intramolecular CH···lone pair interactions in the axial conformer of the complex. DFT calculations supported the experimental results. The reported findings highlight key structure-function relationships in calix[4]-pyrrole cavitands and establish a general strategy for designing guest-responsive molecular containers capable of conformational switching.</p>","PeriodicalId":29797,"journal":{"name":"ACS Organic & Inorganic Au","volume":"5 6","pages":"567-581"},"PeriodicalIF":3.3,"publicationDate":"2025-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12679308/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145701843","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
ACS Organic & Inorganic Au
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1