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Human Microbiome and Resistome Studies 人类微生物组和抵抗组研究
Pub Date : 2018-06-01 DOI: 10.7599/HMR.2018.38.2.71
Mina Rho
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引用次数: 0
Microbiome Research in Atopic Dermatitis 特应性皮炎的微生物组研究
Pub Date : 2018-06-01 DOI: 10.7599/HMR.2018.38.2.85
Min-Hye Kim
Atopic dermatitis (AD) is a representative allergic disease that is accompanied with high disease prevalence and considerable socioeconomic burden. While the pathophysiology is largely unknown, the role of microbes in health and diseases has drawn attention. The development of metagenomics that is a recent advance in analyzing microbiome has enabled us to research how microbiome impacts the development and aggravation of AD. Skin microbiome and intestinal microbiome are assumed to affect the AD. Research has shown a difference in skin and intestinal microbial composition between AD patients and normal controls. Based on the findings of microbial impacts on the AD, efforts to use probiotics for the treatment or prevention of AD have been made. However, further research is needed until the firm conclusion is reached.
特应性皮炎(AD)是一种具有代表性的过敏性疾病,发病率高,社会经济负担大。虽然病理生理学在很大程度上是未知的,但微生物在健康和疾病中的作用已经引起了人们的注意。宏基因组学是分析微生物组的最新进展,使我们能够研究微生物组如何影响阿尔茨海默病的发展和恶化。皮肤微生物组和肠道微生物组被认为影响AD。研究表明,阿尔茨海默病患者与正常人的皮肤和肠道微生物组成存在差异。根据微生物对阿尔茨海默病影响的研究结果,人们已经开始努力使用益生菌来治疗或预防阿尔茨海默病。然而,在得出确切的结论之前,还需要进一步的研究。
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引用次数: 1
Carbapenem-resistant Enterobacteriaceae in Korea 韩国碳青霉烯耐药肠杆菌科
Pub Date : 2018-06-01 DOI: 10.7599/HMR.2018.38.2.99
Jieun Kim
Carbapenem-resistant Enterobacteriaceae (CRE) has emerged as a major problem of public health. By various resistance mechanisms including carbapenemase, there are few antibiotics to treat CRE infection. Therefore, an infection caused by CRE is associated with a higher mortality rate than those caused by other causative agents. By horizontal transmission of the carbapenemase-producing gene, resistance to carbapenem spreads to other organisms and multi-drug resistance could be induced. The incidence of CRE has increased, and many countries have been troubled with CRE outbreaks. The best way to manage and treat CRE is infection control and prevention against CRE. The aim of this paper is to describe the current status of CRE and clinical implication of CRE infection in Korea. The mechanism which induces resistance to carbapenem as well as carbapenemase-producing gene (a gene that could be transferred to other organisms and then induces resistance to carbapenem) make it difficult to treat CRE infection.
耐碳青霉烯肠杆菌科(CRE)已成为公共卫生的一个主要问题。由于碳青霉烯酶等多种耐药机制,目前治疗CRE感染的抗生素很少。因此,与其他病原体引起的感染相比,由CRE引起的感染与更高的死亡率相关。通过碳青霉烯酶产生基因的水平传播,对碳青霉烯烯的耐药性向其他生物扩散,并可诱导多药耐药。CRE的发病率有所增加,许多国家都受到CRE疫情的困扰。控制和治疗CRE的最佳方法是感染控制和预防CRE。本文的目的是描述CRE的现状和CRE感染在韩国的临床意义。碳青霉烯耐药的机制以及碳青霉烯酶产生基因(一种可以转移到其他生物体然后诱导对碳青霉烯耐药的基因)使CRE感染的治疗变得困难。
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引用次数: 2
Human Resistome Study with Metagenomic Sequencing Data 基于宏基因组测序数据的人类抵抗组研究
Pub Date : 2018-06-01 DOI: 10.7599/HMR.2018.38.2.73
J. Shin, Mina Rho
With the introduction of synthetic antibiotics, many lives including humans and animals have been saved against bacterial infection. An increasing level of antibiotics use, however, raises serious problems of multi-drug resistance and transferring of resistance genes across different environments and countries. Advances in highthroughput sequencing technology and efficient bioinformatics methods allow us to perform a large-scale screening and analysis of resistomes in the human and environmental microbiomes. Recent studies on human microbiomes have revealed a diverse distribution of resistance genes and their transferring activities in the communities. This review discusses recent progresses in metagenomic approaches to identify resistance genes in the human microbiome, including genomic sequence search and functional metagenomics methods. Using Rifampicin ADP-ribosyltransferase as an example, an integrative approach that analyzes the sequences and three-dimensional structures of the proteins derived from resistance genes is also introduced.
随着合成抗生素的引入,包括人类和动物在内的许多生命都免于细菌感染。然而,越来越多的抗生素使用引发了多重耐药和耐药基因在不同环境和国家之间转移的严重问题。高通量测序技术和高效生物信息学方法的进步使我们能够对人类和环境微生物组中的抗性组进行大规模筛选和分析。最近对人类微生物组的研究揭示了耐药基因的多样性分布及其在社区中的转移活动。本文综述了利用宏基因组学方法鉴定人类微生物组耐药基因的最新进展,包括基因组序列搜索和功能宏基因组学方法。以利福平adp -核糖基转移酶为例,介绍了一种分析抗性基因衍生蛋白序列和三维结构的综合方法。
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引用次数: 0
Microbiome of Hepatobiliary Diseases 肝胆疾病的微生物组
Pub Date : 2018-06-01 DOI: 10.7599/HMR.2018.38.2.80
Yeseul Kim, D. Choi
Hepatobiliary and pancreatic cancers are associated with poor prognosis owing to their high level of tumor invasiveness, recurrence, hematogenous and lymphatic metastasis, resistance to firstline chemotherapy, and lack of effective target therapy [1,2]. Evidence in the literature suggests that hepatobiliary and pancreatic cancers develop through the accumulation of genetic and epigenetic alterations, which is influenced by host immune state, food, and environmental and microbial exposures [1-4]. The human microbiota is the collection of microorganisms exists in the human being, and the relationships with microorganisms and host can be considered to maintain a wide range of the spectrum, from mutualism to pathogen [5]. Abrupt changes in the microbiota of various human body areas associate with diverse localized or systemic human diseases. The human gastrointestinal tract is one of the biggest storing spaces of microbes in the body and contains both commensal and pathogenic microbial species [6]. Research on intestinal microbiota has shown that inflammatory bowel disease is originated from the varied composition of microbial composition and abnormal and overflowing mucosal immune response [7]. Numerous pathogens can promote cancer through well-identified mechanisms [8]. Although most studies are confined to specific bacterial pathogens and viruses, the link between human cancer and bacterial microbiota has recently been studied actively by using next-generation sequencing technology for microbiome profiling [9]. There is an increasing interest in understanding the role of microbiome as a microenvironment for cancer development, particularly in the area of hepatobiliary and pancreatic cancers [10]. The liver, biliary tract, and pancreas are located in very close Review
肝胆、胰腺肿瘤侵袭性高、易复发、有血淋巴转移、耐一线化疗、缺乏有效靶向治疗等特点,预后较差[1,2]。文献证据表明,肝胆癌和胰腺癌是通过遗传和表观遗传改变的积累而发生的,而遗传和表观遗传改变受宿主免疫状态、食物、环境和微生物暴露的影响[1-4]。人体微生物群是存在于人体内的微生物的集合,与微生物和宿主的关系可以认为保持着广泛的光谱,从共生关系到病原体[5]。人体各部位微生物群的突变与各种局部或全身性人类疾病有关。人体胃肠道是人体最大的微生物储存空间之一,既有共生微生物,也有致病微生物[6]。肠道菌群研究表明,炎症性肠病源于肠道微生物组成的变化和黏膜免疫反应异常、过溢[7]。许多病原体可以通过明确的机制促进癌症[8]。虽然大多数研究局限于特定的细菌病原体和病毒,但最近通过使用下一代测序技术进行微生物组分析,人们积极研究了人类癌症与细菌微生物群之间的联系[9]。人们越来越有兴趣了解微生物组作为癌症发展的微环境的作用,特别是在肝胆癌和胰腺癌领域[10]。肝脏、胆道和胰腺位于非常近的位置
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引用次数: 2
Microbiological Characteristics of Corynebacterium striatum, an Emerging Pathogen 新兴病原体纹状棒状杆菌的微生物学特征
Pub Date : 2018-06-01 DOI: 10.7599/HMR.2018.38.2.93
S. Song, J. Shin
Corynebacterium is a gram-positive bacillus that is widely distributed in the environment [1]. It consists of more than 80 species and is common in the normal f lora of human skin and mucous membranes [1]. These organisms traditionally have been considered contaminants and are ignored when they are detected in clinical specimens. However, the association of Corynebacterium species with disease is increasing, and we should consider them true pathogens when they are isolated from usually sterile specimens or invasive indwelling devices and in patients who have received long-term antimicrobial therapy. In recent years, Corynebacterium striatum has been isolated frequently from clinical specimens, and multi-drug-resistant strains are common. We need to know more precisely about the general characteristics of this organism, its clinical features, an accurate identification method, and antimicrobial resistance. We review the characteristics of C. striatum, an emerging pathogen, focusing on these points.
棒状杆菌是一种广泛分布于环境中的革兰氏阳性芽孢杆菌。它由80多种组成,在人体皮肤和粘膜的正常菌群中很常见。这些生物传统上被认为是污染物,当它们在临床标本中被检测到时被忽略。然而,棒状杆菌种类与疾病的关联正在增加,当它们从通常是无菌的标本或侵入性留置装置中分离出来以及在接受长期抗菌治疗的患者中分离出来时,我们应该认为它们是真正的病原体。近年来,纹状棒状杆菌从临床标本中分离到较多,耐多药菌株较为常见。我们需要更准确地了解这种生物的一般特征、临床特征、准确的鉴定方法和抗微生物药物耐药性。本文对一种新型病原菌纹状体的特征进行了综述。
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引用次数: 2
Perioperative Blood Management: Pros and Cons of ANH and Cell Salvage 围手术期血液管理:ANH和细胞抢救的利弊
Pub Date : 2018-03-01 DOI: 10.7599/HMR.2018.38.1.27
Sangkeun Ahn, Jong Hyun Lee
Without doubt, allogenic blood transfusion has been an important lifesaving option in some circumstances. However, allogenic blood transfusion also has its drawbacks. Side effects of allogenic blood transfusion, blood scarcity and individual religion problem like Jehovah’s witnesses are major issues [1,2]. In this respect, there has been much effort to replace allogenic blood transfusion such as using pharmacological agent, injecting topical vasoconstrictive agent, induced hypotension, intravenous iron, erythropoietin, coagulant and so on [3]. In addition, with growing technology, Cell salvage and Acute normovolemic hemodilution (ANH) has emerged as a substitute for allogenic blood transfusion [3,4]. First, Cell salvage became widely known in the late 1970s due to the infection threat like viral hepatitis and HIV infection from allogenic blood transfusion [5]. Namely, it was introduced in an optimal time to the world. Even now, cell salvage is a useful and effective technique with a low risk of transfusion-borne infection. Second, ANH has been utilized and its efficacy studied since the 1960s [6,7]. ANH is also considered to be helpful in cutting back the volume of allogenic blood transfusion and transfusion of autologous whole blood [8]. Nonetheless, still the efficacy and utility of ANH and cell salvage is unclear with pros and cons due to inconsistent conditions among various articles and outcome from journals ranging from effectiveness to insignificance or being unthrifty when considering other facilities. Hence, through this study, we provide clinical information about procedures mentioned above, gather various articles about cell salvage and ANH and make a conclusion whether cell salvage and ANH is effective or Review
毫无疑问,在某些情况下,同种异体输血是一种重要的救命方法。然而,同种异体输血也有其缺点。异体输血的副作用、血液短缺和耶和华见证人等个人宗教问题是主要问题[1,2]。在这方面,已有很多替代同种异体输血的方法,如使用药物、局部注射血管收缩剂、诱导性降压、静脉注射铁、促红细胞生成素、凝血剂等[3]。此外,随着技术的发展,细胞挽救和急性等容血稀释(ANH)已经成为同种异体输血的替代品[3,4]。首先,20世纪70年代末,由于异体输血引起的病毒性肝炎和HIV感染等感染威胁,细胞挽救术开始广为人知[5]。也就是说,它是在一个最佳的时间引入世界的。即使是现在,细胞抢救也是一种有用和有效的技术,输血传播感染的风险很低。其次,自20世纪60年代以来,ANH就开始被利用并研究其疗效[6,7]。ANH也被认为有助于减少异体输血量和自体全血输血量[8]。尽管如此,由于各种文章和期刊的结果不一致,从有效到不重要或在考虑其他设施时不节俭,ANH和细胞回收的功效和效用仍然不清楚,利弊不一。因此,通过本研究,我们提供上述程序的临床信息,收集各种关于细胞挽救和ANH的文章,并得出细胞挽救和ANH是否有效或审查的结论
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引用次数: 3
Era of Bloodless Surgery: Spotlights on Hemostasic Materials and Techniques 无血手术的时代:止血材料和技术的焦点
Pub Date : 2018-03-01 DOI: 10.7599/HMR.2018.38.1.3
Jiwon V. Park, J. Koh
Hemostasis occurs when blood vessels are injured or ruptured and it is a series of responses for the body to stop bleeding without thrombus [1]. The rapid sequence of hemostatic processes can be divided into four steps and the whole sequence is shown in Fig. 1. Hemostasis is initiated with an arteriolar vasoconstriction process that the damaged blood vessels shrink to block blood from being spilled [2]. The second step after the arteriolar vasoconstriction is platelet aggregation and it is also called primary hemostasis. The third step is called secondary hemostasis or clot formation. The final step includes completed thrombus and antithrombotic events [3,4].
止血发生在血管损伤或破裂时,是机体在没有血栓的情况下进行止血的一系列反应[1]。快速止血过程可分为四个步骤,整个过程如图1所示。止血是由小动脉血管收缩过程开始的,受损血管收缩以阻止血液溢出[2]。小动脉血管收缩后的第二步是血小板聚集,也称为原发性止血。第三步称为继发性止血或凝块形成。最后一步包括完成的血栓和抗血栓事件[3,4]。
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引用次数: 4
Patient Blood Management: An Internist's Perspective 病人血液管理:内科医生的观点
Pub Date : 2018-03-01 DOI: 10.7599/HMR.2018.38.1.38
J. Uhm
Patient blood management (PBM) is a patient-specific, evidencebased and systematic approach to optimize the management of patient and blood transfusion for quality and effective patient care. It aims at improving patient outcomes through the rational and safe use of blood products and minimizing unnecessary exposure to it [1]. The concept of PBM is not only “blood conservation” but also “blood management” which includes the preventive approaches to maintain and optimize hemoglobin (Hb) level and hemostasis [2]. The goal of PBM is not merely to avoid or withhold transfusions, but to timely apply evidence-based medical and surgical concepts designed to manage anemia, optimize hemostasis, and minimize blood loss to improve patient outcomes by relying on a patient’s own blood rather than on donor blood [2,3]. The concept of PBM is well established in surgical patients, demonstrating significant reductions in blood usage, yet with improved patient outcomes and reduced cost [4]. However, 52%–65% of recipients of allogeneic blood transfusion are medical patients with hematologic and non-hematologic malignancies, acute gastrointestinal bleed, renal failure, and other chronic disorders, etc [5]. In contrast to surgical patients, PBM is less developed in medical patients, in particular with hematologic/oncologic diseases, by whom a significant percentage of the blood is consumed [3,5]. This review will discuss how to integrate the concept of PBM into medical conditions including acute coronary syndrome (ACS), heart failure, chronic kidney disease (CKD), chemotherapy-induced anemia (CIA), and hematologic malignancies, in the aspect of red blood cell (RBC). Review
患者血液管理(PBM)是一种针对患者的、以证据为基础的系统方法,用于优化患者和输血管理,以提高患者护理的质量和有效性。其目的是通过合理、安全地使用血液制品,尽量减少不必要的接触,从而改善患者的预后[1]。PBM的概念不仅是“血液保护”,而且是“血液管理”,包括维持和优化血红蛋白(Hb)水平和止血的预防方法[2]。PBM的目标不仅仅是避免或拒绝输血,而是及时应用基于证据的医学和外科概念来管理贫血,优化止血,最大限度地减少失血,通过依赖患者自己的血液而不是献血者的血液来改善患者的预后[2,3]。PBM的概念在手术患者中得到了很好的确立,可以显著减少用血,同时改善患者的预后并降低成本[4]。然而,52%-65%的接受异体输血的是血液学和非血液学恶性肿瘤、急性胃肠道出血、肾功能衰竭等慢性疾病的内科患者[5]。与手术患者相比,PBM在内科患者中发展较少,特别是血液/肿瘤疾病患者,他们消耗了很大比例的血液[3,5]。本文将从红细胞(RBC)的角度讨论如何将PBM的概念融入急性冠状动脉综合征(ACS)、心力衰竭、慢性肾病(CKD)、化疗性贫血(CIA)和血液系统恶性肿瘤等医学疾病中。审查
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引用次数: 2
Cutting-Edge Technologies for Patient Blood Management 患者血液管理的前沿技术
Pub Date : 2018-03-01 DOI: 10.7599/HMR.2018.38.1.1
D. Choi
http://www.e-hmr.org ©2018 Hanyang University College of Medicine · Institute of Medical Science Patient blood management (PBM) is a recently developed technique; it is an evidence-based, patient-focused approach to optimize the management of patient and blood transfusion. Shortage of blood donation and numerous complications from blood transfusions urge many doctors to apply this technique to the real world of practice regardless of types of their individual practice and types of treatment given to their patients. Therefore, this special issue has been organized to introduce the cutting-edge techniques of PBM for various fatal diseases, including hematologic, gastrointestinal, and obstetric and gynecologic diseases. This issue focuses not only on the several strategic tools for PBM but also on the great clinical innovations in the real clinical application of these techniques for managing complicated patients. Recently, the knowledge and understanding of the benefits and costs of these newly developed hemostatic methods have made it easier for medical personnel to manage patient’s blood. A number of hemostatic agents and devices have been developed, and they can be classified by their mechanism of action. Coagulants can result in hemostasis by means of various mechanisms, including physical, caustic, bio-physical, and biologic actions. Hemostatic devices are divided into several categories such as dressings, glue, clips, electrocautery devices, and so on. Park and Koh will touch on various kinds of hemostatic materials and techniques [1]. With the global implementation of PBM, administration of iron and erythropoietin (EPO) has become the most common pharmacologic choice based on current practice’ needs. However, controversy still exists. Therefore, further studies on iron and EPO are warranted to ensure better and safer patient care. This topic will be reviewed by Lee and Yuh [2]. Over the last decade, autologous blood transfusion has increasingly been raising concerns owing to awareness of adverse effects of allogeneic blood transfusion, blood shortage, and patients with religious or other personal issues. With advances in medicine, cell salvage and acute normovolemic hemodilution (ANH) have been proposed as an alternative to allogeneic blood transfusion. Ahn and Lee [3] will provide an overview of current knowledge of ANH and cell salvage and summarize potential benefits of these techniques. An individualized approach to each patient with anemia is recommended in various medical conditions such as acute coronary syndrome, heart failure, chronic kidney disease, and malignancies. However, PBM has not yet been established in the medical field as well as in perioperative care. Uhm [4] will provide an overview of the past, the present, and the future of PBM for the medical field. Significant advances have been made in PBM in the surgical field, especially in anesthesiology, hepatobiliary and pancreatic surgery, and obstetrics and gynecology. Jung
http://www.e-hmr.org©2018汉阳大学医学院·医学科学研究所患者血液管理(PBM)是一项最新开发的技术;这是一种以证据为基础、以患者为中心的优化患者和输血管理的方法。献血的短缺和输血引起的众多并发症促使许多医生将这种技术应用于现实世界的实践,而不管他们个人的实践类型和对患者的治疗类型。因此,本期特刊专门介绍PBM治疗各种致命疾病的前沿技术,包括血液病、胃肠病、产科和妇科疾病。本期重点介绍了PBM的几种战略工具,以及这些技术在实际临床应用中对复杂患者管理的重大临床创新。最近,对这些新开发的止血方法的好处和成本的认识和理解使医务人员更容易管理病人的血液。许多止血剂和装置已经被开发出来,它们可以根据它们的作用机制进行分类。凝血剂可以通过多种机制导致止血,包括物理、腐蚀性、生物物理和生物作用。止血装置分为敷料、胶、夹、电灼装置等几类。Park和Koh将涉及各种止血材料和技术[1]。随着PBM的全球实施,根据目前的实践需要,铁和促红细胞生成素(EPO)的管理已成为最常见的药物选择。然而,争议仍然存在。因此,铁和促生成素的进一步研究是必要的,以确保更好和更安全的患者护理。Lee和Yuh[2]将对这一主题进行回顾。在过去的十年中,自体输血越来越引起人们的关注,因为人们意识到异体输血的不良影响,血液短缺,以及有宗教或其他个人问题的患者。随着医学的进步,细胞抢救和急性等容血稀释(ANH)已被提出作为异基因输血的替代方法。Ahn和Lee[3]将概述ANH和细胞挽救的当前知识,并总结这些技术的潜在益处。在不同的医疗条件下,如急性冠状动脉综合征、心力衰竭、慢性肾脏疾病和恶性肿瘤,建议对每个贫血患者采用个性化的方法。然而,在医学领域和围手术期护理中,PBM尚未建立。Uhm[4]将概述PBM在医学领域的过去、现在和未来。PBM在外科领域取得了重大进展,特别是在麻醉学、肝胆胰外科和妇产科。Jung和Kim[5]将讨论麻醉领域当前问题的最新进展。PBM在肝胆胰外科和妇产科领域的应用将分别由Jung和Choi[6]和Lee[7]进行综述。最后,Um[8]将提出韩国PBM的未来展望。输血是一项重要的医疗程序,可以挽救病人的生命。但是,预计在不久的将来,国内将出现输血产品短缺的情况。PBM是一种基于证据的多学科方法,用于优化可能需要输血的患者的护理。这一目标是通过临床管理或保存患者自己的血液来实现的,而不是轻率地求助于异体血液。虽然韩国才刚刚开始实施PBM,但希望社论
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引用次数: 0
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Hanyang Medical Reviews
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