{"title":"Comparative efficacy of ChatGPT 3.5, ChatGPT 4, and other large language models in gynecology and infertility research","authors":"Pallav Sengupta , Sulagna Dutta , Srikumar Chakravarthi , Ravindran Jegasothy , Ravichandran Jeganathan , Anuradha Pichumani","doi":"10.1016/j.gocm.2023.09.002","DOIUrl":"10.1016/j.gocm.2023.09.002","url":null,"abstract":"","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 4","pages":"Pages 203-206"},"PeriodicalIF":0.0,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2667164623000842/pdfft?md5=8c793ee960bbbd7d58d4b14b01ad70c7&pid=1-s2.0-S2667164623000842-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135348732","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01DOI: 10.1016/j.gocm.2023.08.002
Xiuli Sun , Lei Gao , Hongmei Zhu , Wei Jiao , Jianjun Guo , Jianliu Wang , Lihui Wei , Sports, Exercise and Health Branch of Chinese Preventive Medicine Association
Objective
Pregnancy has been identified as a risk factor for pelvic floor dysfunction (PFD). The aim of this study was to establish primary prevention measures for PFD during pregnancy and reduce the overall incidence of PFD.
Methods
We assembled a panel of 36 experts, including gynecologists, obstetricians, and physiotherapists. Through surveys and expert meetings, the panel reviewed and assessed the safety and effectiveness of various clinical interventions. Based on expert comments from Round 1, a revised list of 8 clinical interventions was developed and submitted for a second round of expert review.
Results
A consensus was reached on the importance of implementing prevention measures to protect pelvic floor function during pregnancy. Experts particularly emphasized the significance of health education, weight management, pelvic floor muscle training, respiratory training, overall exercise, physical activity, and perineal massage.
Conclusion
The expert consensus provides comprehensive clinical measures to safeguard pelvic floor function during pregnancy. This paper represents the initial step toward developing scientific recommendations for pregnant women regarding the primary prevention of PFD. Future research should focus on the implementation of these recommendations in clinical practice.
{"title":"Chinese expert consensus on primary prevention for pelvic floor dysfunction during pregnancy","authors":"Xiuli Sun , Lei Gao , Hongmei Zhu , Wei Jiao , Jianjun Guo , Jianliu Wang , Lihui Wei , Sports, Exercise and Health Branch of Chinese Preventive Medicine Association","doi":"10.1016/j.gocm.2023.08.002","DOIUrl":"10.1016/j.gocm.2023.08.002","url":null,"abstract":"<div><h3>Objective</h3><p>Pregnancy has been identified as a risk factor for pelvic floor dysfunction (PFD). The aim of this study was to establish primary prevention measures for PFD during pregnancy and reduce the overall incidence of PFD.</p></div><div><h3>Methods</h3><p>We assembled a panel of 36 experts, including gynecologists, obstetricians, and physiotherapists. Through surveys and expert meetings, the panel reviewed and assessed the safety and effectiveness of various clinical interventions. Based on expert comments from Round 1, a revised list of 8 clinical interventions was developed and submitted for a second round of expert review.</p></div><div><h3>Results</h3><p>A consensus was reached on the importance of implementing prevention measures to protect pelvic floor function during pregnancy. Experts particularly emphasized the significance of health education, weight management, pelvic floor muscle training, respiratory training, overall exercise, physical activity, and perineal massage.</p></div><div><h3>Conclusion</h3><p>The expert consensus provides comprehensive clinical measures to safeguard pelvic floor function during pregnancy. This paper represents the initial step toward developing scientific recommendations for pregnant women regarding the primary prevention of PFD. Future research should focus on the implementation of these recommendations in clinical practice.</p></div>","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 3","pages":"Pages 133-139"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44003736","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01DOI: 10.1016/j.gocm.2023.07.006
Yanhua Liu , Man Tan , Cheng Tan , Xin Yang
Objectives
This research aimed to investigate changes in defecation sensory threshold and related factors in patients with posterior vaginal wall prolapse.
Methods
A total of 214 patients with pelvic organ prolapse were recruited between October 2019 to January 2021. All patients underwent a defecation sensory threshold examination, physical examination, and pelvic floor ultrasound examination. Factors related to the defecation sensory threshold were analyzed.
Results
(1) Among the participants, 57 patients (26.6%) had a defecation sensory threshold of more than 90 ml. Patients with a threshold > 90 ml showed higher scores of defecation dysfunction in the Constipation Scoring System (CSS) score (p=0.003) and higher scores of constipation in the Colorectal-anal Distress Inventory 8 (CRADI-8) score (p=0.002). (2) The defecation sensation threshold positively correlated with the Ap point (r=0.448, p<0.001), the Bp point (r=0.345, p=0.009), the area of the levator-ani hiatus measured by transvaginal ultrasound (r=0.403, p=0.002), and parity (r=0.355, p=0.007).
Conclusions
Patients diagnosed with pelvic organ prolapse commonly experience an increased threshold of defecation sensation. Elevated thresholds were associated with more frequent constipation symptoms. Additionally, the severity of posterior pelvic prolapse positively correlated with the defecation sensory threshold.
{"title":"Sensory threshold for defecation and its correlation with pelvic organ prolapse: An exploration of related factors","authors":"Yanhua Liu , Man Tan , Cheng Tan , Xin Yang","doi":"10.1016/j.gocm.2023.07.006","DOIUrl":"10.1016/j.gocm.2023.07.006","url":null,"abstract":"<div><h3>Objectives</h3><p>This research aimed to investigate changes in defecation sensory threshold and related factors in patients with posterior vaginal wall prolapse.</p></div><div><h3>Methods</h3><p>A total of 214 patients with pelvic organ prolapse were recruited between October 2019 to January 2021. All patients underwent a defecation sensory threshold examination, physical examination, and pelvic floor ultrasound examination. Factors related to the defecation sensory threshold were analyzed.</p></div><div><h3>Results</h3><p>(1) Among the participants, 57 patients (26.6%) had a defecation sensory threshold of more than 90 ml. Patients with a threshold > 90 ml showed higher scores of defecation dysfunction in the Constipation Scoring System (CSS) score (<em>p=</em>0.003) and higher scores of constipation in the Colorectal-anal Distress Inventory 8 (CRADI-8) score (<em>p</em>=0.002). (2) The defecation sensation threshold positively correlated with the Ap point (r=0.448, <em>p</em><0.001), the Bp point (r=0.345, <em>p</em>=0.009), the area of the levator-ani hiatus measured by transvaginal ultrasound (r=0.403, <em>p</em>=0.002), and parity (r=0.355, <em>p</em>=0.007).</p></div><div><h3>Conclusions</h3><p>Patients diagnosed with pelvic organ prolapse commonly experience an increased threshold of defecation sensation. Elevated thresholds were associated with more frequent constipation symptoms. Additionally, the severity of posterior pelvic prolapse positively correlated with the defecation sensory threshold.</p></div>","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 3","pages":"Pages 149-153"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42141881","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01DOI: 10.1016/j.gocm.2023.08.004
Mian Dehi Boston , Guie Privat , Apollinaire Horo , Aka Edele , Kouakou Konan Virginie , Aholoupke Bruno , Koné Seydou , Rochon Sarah , Boni Serge , Burke Thomas F
Background
The use of uterine balloon tamponade (UBT) devices for intrauterine packing and management of vaginal bleeding by uterine atony has shown promising results in improving the quality of care and reducing maternal mortality.
Objective
This report aims to provide an overview of progress made in implementing UBT devices in northern Cote d'Ivoire.
Material and methods
A four-year retrospective study was conducted in the North-East (163,645), North-Center (351,909), and North-West (57,983). In 2017, UBT was adopted by members of the healthcare system. Subsequently, 5 national and 32 regional trainers have been trained. The training session was a theoretical and practical program with a low simulator. UBT is a male condom tied to a urinary catheter, filled with liquid. Positive outcomes included stopping bleeding, avoiding the need for surgery, and preventing maternal deaths (MD). In 2018, 3,515 UBT devices were distributed. In 2019, monitoring tools and transmission circuits of the data were validated. In 2020, the collection of data and local manufacturing was launched.
Results
During the process, 978 health workers, mainly midwife (52.0%) and nurses (32.2%) out of the 1,295 assigned were trained. The number of trained individuals decreased from 209 in 2019 to 160 in 2020. A total of 1,715 UBT devices were locally manufactured, adding to the existing gift of 5,080 devices, with total availability of 6,795. The distribution of devices increased from 2017 to 2019 but decreased in 2020. Success rates increased from 87.3% in 2017 (365/418) to 95.0% in 2019 (556/585) and slightly decreased in 2020 to 98.0% (681/695). Adverse outcomes (144/2,193), included MD (35/2,193) and medical evacuation to the surgical center (109/2,193).
Conclusion
The implementation of UBT in northern Cote d'Ivoire successfully reduced maternal death rates caused by immediate post-partum hemorrhage (IPPH). However, to ensure sustainability, further improvements are needed, including increased monitoring, ongoing training, and device availability.
{"title":"Implementing uterine balloon tamponade (UBT) device for immediate postpartum hemorrhage management: Leveraging resource allocation and highlighting noteworthy experiences","authors":"Mian Dehi Boston , Guie Privat , Apollinaire Horo , Aka Edele , Kouakou Konan Virginie , Aholoupke Bruno , Koné Seydou , Rochon Sarah , Boni Serge , Burke Thomas F","doi":"10.1016/j.gocm.2023.08.004","DOIUrl":"10.1016/j.gocm.2023.08.004","url":null,"abstract":"<div><h3>Background</h3><p>The use of uterine balloon tamponade (UBT) devices for intrauterine packing and management of vaginal bleeding by uterine atony has shown promising results in improving the quality of care and reducing maternal mortality.</p></div><div><h3>Objective</h3><p>This report aims to provide an overview of progress made in implementing UBT devices in northern Cote d'Ivoire.</p></div><div><h3>Material and methods</h3><p>A four-year retrospective study was conducted in the North-East (163,645), North-Center (351,909), and North-West (57,983). In 2017, UBT was adopted by members of the healthcare system. Subsequently, 5 national and 32 regional trainers have been trained. The training session was a theoretical and practical program with a low simulator. UBT is a male condom tied to a urinary catheter, filled with liquid. Positive outcomes included stopping bleeding, avoiding the need for surgery, and preventing maternal deaths (MD). In 2018, 3,515 UBT devices were distributed. In 2019, monitoring tools and transmission circuits of the data were validated. In 2020, the collection of data and local manufacturing was launched.</p></div><div><h3>Results</h3><p>During the process, 978 health workers, mainly midwife (52.0%) and nurses (32.2%) out of the 1,295 assigned were trained. The number of trained individuals decreased from 209 in 2019 to 160 in 2020. A total of 1,715 UBT devices were locally manufactured, adding to the existing gift of 5,080 devices, with total availability of 6,795. The distribution of devices increased from 2017 to 2019 but decreased in 2020. Success rates increased from 87.3% in 2017 (365/418) to 95.0% in 2019 (556/585) and slightly decreased in 2020 to 98.0% (681/695). Adverse outcomes (144/2,193), included MD (35/2,193) and medical evacuation to the surgical center (109/2,193).</p></div><div><h3>Conclusion</h3><p>The implementation of UBT in northern Cote d'Ivoire successfully reduced maternal death rates caused by immediate post-partum hemorrhage (IPPH). However, to ensure sustainability, further improvements are needed, including increased monitoring, ongoing training, and device availability.</p></div>","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 3","pages":"Pages 175-180"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44324867","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Postpartum hemorrhage (PPH) could be avoided by identifying high-risk women. The objective of this systematic review is to determine PPH predictors using machine learning (ML) approaches.
Method
This strategy included searching for studies from inception through November 2022 through the database included: Cochrane Central Register, PubMed, MEDLINE, EMBASE, ProQuest, Scopus, WOS, IEEE Xplore, and the Google Scholar database. The search methodology employed the PICO framework (population, intervention, control, and outcomes). In this study, “P” represents PPH populations, “I” represents the ML approach as intervention, “C” represents the traditional statistical analysis approach as control, and “O” represents prediction and diagnosis outcomes. The quality assessment of each included study was performed using the PROBAST methodology.
Results
The initial search strategy resulted in 2048 citations, which were subsequently refined by removing duplicates and irrelevant studies. Ultimately, four studies were deemed eligible for inclusion in the review. Among these studies, three were classified as having a low risk of bias, while one was considered to have a low to moderate risk of bias. A total of 549 unique variables were identified as candidate predictors from the included studies. Nine distinct models were chosen as ML algorithms from the four studies. Each of the four studies employed different metrics, such as the area under the curve, false positive rate, false negative rate, and sensitivity, to report the accuracy of their models. The ML models exhibited varying accuracies, with the area under the curve (AUC) ranging from 0.706 to 0.979. Several weighted predictors were identified as significant factors in PPH risk prediction. These included pre-pregnancy maternal weight, maternal weight at the time of admission, fetal macrosomia, gestational age, level of hematocrit at the time of admission, shock index, frequency of contractions during labor, white blood cell count, pregnancy-induced hypertension, the weight of the newborn, duration of the second stage of labor, amniotic fluid index, body mass index, and cesarean delivery before labor. These factors were determined to have a notable influence on the prediction of PPH risk.
Conclusion
The findings from ML models used to predict PPH are highly encouraging.
背景产后出血(PPH)可以通过识别高危妇女来避免。本系统综述的目的是使用机器学习(ML)方法确定PPH预测因子。该策略包括通过Cochrane Central Register、PubMed、MEDLINE、EMBASE、ProQuest、Scopus、WOS、IEEE Xplore和Google Scholar数据库搜索从成立到2022年11月的研究。搜索方法采用PICO框架(人群、干预、控制和结果)。在本研究中,“P”代表PPH群体,“I”代表干预的ML方法,“C”代表控制的传统统计分析方法,“O”代表预测和诊断结果。采用PROBAST方法对每个纳入的研究进行质量评估。最初的搜索策略产生了2048条引用,随后通过删除重复和不相关的研究对其进行了改进。最终,四项研究被认为符合纳入综述的条件。在这些研究中,3项被归类为低偏倚风险,1项被认为具有低至中等偏倚风险。从纳入的研究中,共有549个独特的变量被确定为候选预测因子。从这四项研究中选择了九个不同的模型作为ML算法。四项研究中的每一项都采用了不同的指标,如曲线下面积、假阳性率、假阴性率和敏感性,来报告其模型的准确性。ML模型具有不同的精度,曲线下面积(AUC)在0.706 ~ 0.979之间。几个加权预测因子被确定为PPH风险预测的重要因素。这些指标包括孕前母亲体重、入院时母亲体重、胎儿巨大、胎龄、入院时红细胞压积水平、休克指数、分娩时宫缩频率、白细胞计数、妊娠高血压、新生儿体重、第二产程持续时间、羊水指数、体重指数和分娩前剖宫产。这些因素对PPH风险的预测有显著影响。结论ML模型预测PPH的结果令人鼓舞。
{"title":"Predicting risk of postpartum hemorrhage using machine learning approach: A systematic review","authors":"Amene Ranjbar , Sepideh Rezaei Ghamsari , Banafsheh Boujarzadeh , Vahid Mehrnoush , Fatemeh Darsareh","doi":"10.1016/j.gocm.2023.07.002","DOIUrl":"10.1016/j.gocm.2023.07.002","url":null,"abstract":"<div><h3>Background</h3><p>Postpartum hemorrhage (PPH) could be avoided by identifying high-risk women. The objective of this systematic review is to determine PPH predictors using machine learning <strong>(</strong>ML) approaches.</p></div><div><h3>Method</h3><p>This strategy included searching for studies from inception through November 2022 through the database included: Cochrane Central Register, PubMed, MEDLINE, EMBASE, ProQuest, Scopus, WOS, IEEE Xplore, and the Google Scholar database. The search methodology employed the PICO framework (population, intervention, control, and outcomes). In this study, “P” represents PPH populations, “I” represents the ML approach as intervention, “C” represents the traditional statistical analysis approach as control, and “O” represents prediction and diagnosis outcomes. The quality assessment of each included study was performed using the PROBAST methodology.</p></div><div><h3>Results</h3><p>The initial search strategy resulted in 2048 citations, which were subsequently refined by removing duplicates and irrelevant studies. Ultimately, four studies were deemed eligible for inclusion in the review. Among these studies, three were classified as having a low risk of bias, while one was considered to have a low to moderate risk of bias. A total of 549 unique variables were identified as candidate predictors from the included studies. Nine distinct models were chosen as ML algorithms from the four studies. Each of the four studies employed different metrics, such as the area under the curve, false positive rate, false negative rate, and sensitivity, to report the accuracy of their models. The ML models exhibited varying accuracies, with the area under the curve (AUC) ranging from 0.706 to 0.979. Several weighted predictors were identified as significant factors in PPH risk prediction. These included pre-pregnancy maternal weight, maternal weight at the time of admission, fetal macrosomia, gestational age, level of hematocrit at the time of admission, shock index, frequency of contractions during labor, white blood cell count, pregnancy-induced hypertension, the weight of the newborn, duration of the second stage of labor, amniotic fluid index, body mass index, and cesarean delivery before labor. These factors were determined to have a notable influence on the prediction of PPH risk.</p></div><div><h3>Conclusion</h3><p>The findings from ML models used to predict PPH are highly encouraging.</p></div>","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 3","pages":"Pages 170-174"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43122734","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01DOI: 10.1016/j.gocm.2023.07.005
Jerome L. Belinson , Robert G. Pretorius , Ruifang Wu , Youlin Qiao
Since 1998, Preventive Oncology International, Inc. (POI) has been at the forefront of studying human papillomavirus (HPV) self-collection for cervical cancer screening, with a significant focus in China. Through multiple clinical trials over the past 25 years, POI has explored various aspects related to self-collection methodologies. In 2004–2006, POI established that self-collection could be equivalent to direct endocervical samples. Subsequently, a large randomized trial involving 10,000 patients in 2010 further confirmed that self-collected vaginal specimens, tested for high-risk HPV (hrHPV) using a PCR-based assay with high analytic sensitivity, could effectively replace endocervical specimens with minimal loss of sensitivity and a slight decrease in specificity. Throughout the years, POI's research has encompassed several crucial topics, including patient acceptance, the development of new cost-effective, simpler, and faster assays, exploring different collection devices, devising efficient methods of specimen transport, and implementing population-based screening systems. The findings strongly support the integration of self-collection methodologies into cervical cancer control programs worldwide, particularly in medically underserved regions. As HPV self-collection continues to evolve, ongoing research and innovations are expected to play a pivotal role in achieving the global mission of combating cervical cancer.
自1998年以来,Preventive Oncology International, Inc. (POI)一直走在研究人乳头瘤病毒(HPV)自我采集用于宫颈癌筛查的前沿,并将重点放在中国。通过过去25年的多次临床试验,POI探索了与自我收集方法相关的各个方面。2004-2006年,POI确定自采可等同于直接宫颈内取样。随后,2010年一项涉及10,000名患者的大型随机试验进一步证实,使用基于pcr的高分析灵敏度检测高危HPV (hrHPV)的自收集阴道标本可以有效地替代宫颈内标本,且敏感性损失最小,特异性略有下降。多年来,POI的研究涵盖了几个关键主题,包括患者接受度,开发新的成本效益,更简单,更快速的检测方法,探索不同的采集设备,设计有效的标本运输方法,以及实施基于人群的筛查系统。研究结果强烈支持将自我收集方法纳入全球宫颈癌控制计划,特别是在医疗服务不足的地区。随着HPV自我收集的不断发展,正在进行的研究和创新有望在实现抗击宫颈癌的全球使命中发挥关键作用。
{"title":"Preventive Oncology International: A brief history of HPV self-collected vaginal specimens for cervical cancer screening","authors":"Jerome L. Belinson , Robert G. Pretorius , Ruifang Wu , Youlin Qiao","doi":"10.1016/j.gocm.2023.07.005","DOIUrl":"10.1016/j.gocm.2023.07.005","url":null,"abstract":"<div><p>Since 1998, Preventive Oncology International, Inc. (POI) has been at the forefront of studying human papillomavirus (HPV) self-collection for cervical cancer screening, with a significant focus in China. Through multiple clinical trials over the past 25 years, POI has explored various aspects related to self-collection methodologies. In 2004–2006, POI established that self-collection could be equivalent to direct endocervical samples. Subsequently, a large randomized trial involving 10,000 patients in 2010 further confirmed that self-collected vaginal specimens, tested for high-risk HPV (hrHPV) using a PCR-based assay with high analytic sensitivity, could effectively replace endocervical specimens with minimal loss of sensitivity and a slight decrease in specificity. Throughout the years, POI's research has encompassed several crucial topics, including patient acceptance, the development of new cost-effective, simpler, and faster assays, exploring different collection devices, devising efficient methods of specimen transport, and implementing population-based screening systems. The findings strongly support the integration of self-collection methodologies into cervical cancer control programs worldwide, particularly in medically underserved regions. As HPV self-collection continues to evolve, ongoing research and innovations are expected to play a pivotal role in achieving the global mission of combating cervical cancer.</p></div>","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 3","pages":"Pages 144-148"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44730587","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01DOI: 10.1016/j.gocm.2023.08.003
Sonal Upadhyay , Ravi Bhushan , Anima Tripathi , Lavina Chaubey , Amita Diwakar , Pawan K. Dubey
Objective
The objective of this study is to differentiate between uterine leiomyomas (ULM) and uterine leiomyosarcomas (ULMS) by conducting molecular differential analysis and identifying potential prognostic biomarkers for diagnosis.
Methods
The microarray datasets (GSEID: GSE64763 and GSE185543) were retrieved from the Gene Expression Omnibus database. Data preprocessing and differential gene expressions (DEGs) analysis were performed. The DEGs were further intersected to find the common DEGs in ULM and ULMS and further validation of selected DEGs were performed. Further, a machine learning classifier was also applied in the selection of biomarkers. Protein-protein interaction network based upon STRING v 10.5, was constructed. Additionally, Gene Ontology (GO) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway enrichment analyses were also performed to dissect possible functions and pathways.
Results
A total of 50 significant DEGs for ULM while 321 DEGs for ULMS have been identified with their official gene symbol. Between ULM and ULMS, a total of 14 common DEGs were identified of which 8 were up-regulated while 6 were down-regulated. The DEGs of (GSE185543) were also analyzed and the significant genes were retrieved common in both datasets for further analysis. Using a machine learning approach, 10 feature genes were identified. Using the expression profiles of these genes, a sequential minimal optimization (SMO) prediction model was built on the training set, and it accurately and reliably classified features expression in ULM and ULMS in the independent test set. Furthermore, Co- Enrichment analysis was also performed.
Conclusion
The study identified several DEGs, including ZNF365, EPYC, COL11A1, SHOX2, MMP13, TNN, GPM6A, and GATA2, through cross-validation, machine learning classifier, and Co- Enrichment analysis. These candidate disease genes may provide valuable insight into the underlying mechanisms and could be used as potential diagnostic biomarkers for ULM and ULMS. However, further validation of these genes is necessary to better understand their roles in the pathogenesis of ULM and ULMS.
{"title":"Differential gene expression profile evaluation between uterine leiomyoma and leiomyosarcoma using a machine learning approach","authors":"Sonal Upadhyay , Ravi Bhushan , Anima Tripathi , Lavina Chaubey , Amita Diwakar , Pawan K. Dubey","doi":"10.1016/j.gocm.2023.08.003","DOIUrl":"https://doi.org/10.1016/j.gocm.2023.08.003","url":null,"abstract":"<div><h3>Objective</h3><p>The objective of this study is to differentiate between uterine leiomyomas (ULM) and uterine leiomyosarcomas (ULMS) by conducting molecular differential analysis and identifying potential prognostic biomarkers for diagnosis.</p></div><div><h3>Methods</h3><p>The microarray datasets (GSEID: GSE64763 and GSE185543) were retrieved from the Gene Expression Omnibus database. Data preprocessing and differential gene expressions (DEGs) analysis were performed. The DEGs were further intersected to find the common DEGs in ULM and ULMS and further validation of selected DEGs were performed. Further, a machine learning classifier was also applied in the selection of biomarkers. Protein-protein interaction network based upon STRING v 10.5, was constructed. Additionally, Gene Ontology (GO) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway enrichment analyses were also performed to dissect possible functions and pathways.</p></div><div><h3>Results</h3><p>A total of 50 significant DEGs for ULM while 321 DEGs for ULMS have been identified with their official gene symbol. Between ULM and ULMS, a total of 14 common DEGs were identified of which 8 were up-regulated while 6 were down-regulated. The DEGs of (GSE185543) were also analyzed and the significant genes were retrieved common in both datasets for further analysis. Using a machine learning approach, 10 feature genes were identified. Using the expression profiles of these genes, a sequential minimal optimization (SMO) prediction model was built on the training set, and it accurately and reliably classified features expression in ULM and ULMS in the independent test set. Furthermore, Co- Enrichment analysis was also performed.</p></div><div><h3>Conclusion</h3><p>The study identified several DEGs, including ZNF365, EPYC, COL11A1, SHOX2, MMP13, TNN, GPM6A, and GATA2, through cross-validation, machine learning classifier, and Co- Enrichment analysis. These candidate disease genes may provide valuable insight into the underlying mechanisms and could be used as potential diagnostic biomarkers for ULM and ULMS. However, further validation of these genes is necessary to better understand their roles in the pathogenesis of ULM and ULMS.</p></div>","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 3","pages":"Pages 154-162"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49878622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01DOI: 10.1016/j.gocm.2023.07.004
Shuqing Ding
{"title":"Integrative medicine for pelvic floor disorders: A conceptual framework","authors":"Shuqing Ding","doi":"10.1016/j.gocm.2023.07.004","DOIUrl":"10.1016/j.gocm.2023.07.004","url":null,"abstract":"","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 3","pages":"Pages 140-143"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49407067","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01DOI: 10.1016/j.gocm.2023.07.001
Giulio A. Santoro, Patrizia Pelizzo, Mohammed Alharbi
{"title":"Advanced ultrasound for benign anorectal conditions: is it worthwhile?","authors":"Giulio A. Santoro, Patrizia Pelizzo, Mohammed Alharbi","doi":"10.1016/j.gocm.2023.07.001","DOIUrl":"10.1016/j.gocm.2023.07.001","url":null,"abstract":"","PeriodicalId":34826,"journal":{"name":"Gynecology and Obstetrics Clinical Medicine","volume":"3 3","pages":"Pages 131-132"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44519406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}