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The role of ABC transporter DrrABC in the export of PDIM in Mycobacterium tuberculosis ABC 转运体 DrrABC 在结核分枝杆菌 PDIM 的输出过程中的作用
Q1 Immunology and Microbiology Pub Date : 2024-10-15 DOI: 10.1016/j.tcsw.2024.100132
Nabiela Moolla , Helen Weaver , Rebeca Bailo , Albel Singh , Vassiliy N. Bavro , Apoorva Bhatt
The Mycobacterium tuberculosis virulence lipid phthiocerol dimycocerosate (PDIM) is exported by a complex mechanism that involves multiple proteins including the Resistance-Nodulation-Division (RND) transporter MmpL7 and the lipoprotein LppX. Here, we probe the role of the putative heterooligomeric ATP-Binding Cassette (ABC) transporter complex composed of DrrA, DrrB and DrrC in PDIM transport by constructing a set of individual null mutants of drrA, drrB and drrC in the vaccine strain Mycobacterium bovis BCG. Loss of all three, or individual drr genes, all resulted in a complete loss of PDIM export to the outer envelope of the mycobacterial cell. Furthermore, guided by a bioinformatic analysis we interrogated specific signature residues within the DrrABC to demonstrate that it is indeed an ABC transporter, and our modelling, together with the mutagenesis identify it as a member of the Type V family of ABC exporters. We identify several unique structural elements of the transporter, including a non-canonical C-terminally inserted domain (CTD) structure within DrrA, which may account for its functional properties.
结核分枝杆菌毒力脂质酞酰芹醇二甲芹糖酯(PDIM)的输出机制复杂,涉及多种蛋白质,包括抗性-结节-分裂(RND)转运体 MmpL7 和脂蛋白 LppX。在这里,我们通过在疫苗菌株卡介苗中构建一组 drrA、drrB 和 drrC 的单个无效突变体,探究了由 DrrA、DrrB 和 DrrC 组成的假定异源同源 ATP 结合盒(ABC)转运体复合物在 PDIM 转运中的作用。所有三个或单个 drr 基因的缺失都会导致 PDIM 完全丧失向分枝杆菌细胞外包膜的输出。此外,在生物信息学分析的指导下,我们询问了 DrrrABC 中的特定特征残基,证明它确实是 ABC 转运体,我们的建模和诱变确定它是 ABC 转运体 V 型家族的成员。我们确定了该转运体的几个独特结构元素,包括 DrrA 中的非经典 C 端插入结构域 (CTD),这可能是其功能特性的原因。
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引用次数: 0
Sorting of GPI-anchored proteins at the trypanosome surface is independent of GPI insertion signals 锥虫表面 GPI-anchored 蛋白质的分拣与 GPI 插入信号无关
Q1 Immunology and Microbiology Pub Date : 2024-07-06 DOI: 10.1016/j.tcsw.2024.100131
Thomas Henry Miller, Sabine Schiessler, Ella Maria Rogerson, Catarina Gadelha

The segregation of glycosylphosphatidylinositol-anchored proteins (GPI-APs) to distinct domains on the plasma membrane of eukaryotic cells is important for their correct cellular function, but the mechanisms by which GPI-APs are sorted are yet to be fully resolved. An extreme example of this is in African trypanosomes, where the major surface glycoprotein floods the whole cell surface while most GPI-APs are retained in a specialised domain at the base of the flagellum. One possibility is that anchor attachment signals direct differential sorting of proteins. To investigate this, we fused a monomeric reporter to the GPI-anchor insertion signals of trypanosome proteins that are differentially sorted on the plasma membrane. Fusions were correctly anchored by GPI, post-translationally modified, and routed to the plasma membrane, but this delivery was independent of retained signals upstream of the ω site. Instead, ω−minus signal strength appears key to efficacy of GPI addition and to GPI-AP cellular level. Thus, at least in this system, sorting is not encoded at the time of GPI anchor addition or in the insertion sequence retained in processed proteins. We discuss these findings in the context of previously proposed models for sorting mechanisms in trypanosomes.

将糖基磷脂酰肌醇锚定蛋白(GPI-APs)分离到真核细胞质膜上的不同区域对其正确的细胞功能非常重要,但 GPI-APs 的分离机制尚未完全确定。非洲锥虫就是一个极端的例子,它的主要表面糖蛋白遍布整个细胞表面,而大多数 GPI-AP 则保留在鞭毛基部的一个专门区域。一种可能性是,锚附着信号会引导蛋白质的不同分拣。为了研究这一点,我们将单体报告物与在质膜上进行不同分选的锥虫蛋白质的 GPI-锚插入信号融合。融合蛋白被 GPI 正确锚定、翻译后修饰并被输送到质膜上,但这种输送与 ω 位点上游的保留信号无关。相反,ω-minus 信号强度似乎是 GPI 添加效果和 GPI-AP 细胞水平的关键。因此,至少在这个系统中,分选不是在添加 GPI 锚点时编码的,也不是在加工蛋白中保留的插入序列中编码的。我们结合之前提出的锥虫分选机制模型讨论了这些发现。
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引用次数: 0
Study of fungal cell wall evolution through its monosaccharide composition: An insight into fungal species interacting with plants 通过单糖组成研究真菌细胞壁的进化:洞察与植物相互作用的真菌物种
Q1 Immunology and Microbiology Pub Date : 2024-06-01 DOI: 10.1016/j.tcsw.2024.100127
Sara I. Yugueros , Jorge Peláez , Jason E. Stajich , María Fuertes-Rabanal , Andrea Sánchez-Vallet , Asier Largo-Gosens , Hugo Mélida

Every fungal cell is encapsulated in a cell wall, essential for cell viability, morphogenesis, and pathogenesis. Most knowledge of the cell wall composition in fungi has focused on ascomycetes, especially human pathogens, but considerably less is known about early divergent fungal groups, such as species in the Zoopagomycota and Mucoromycota phyla. To shed light on evolutionary changes in the fungal cell wall, we studied the monosaccharide composition of the cell wall of 18 species including early diverging fungi and species in the Basidiomycota and Ascomycota phyla with a focus on those with pathogenic lifestyles and interactions with plants. Our data revealed that chitin is the most characteristic component of the fungal cell wall, and was found to be in a higher proportion in the early divergent groups. The Mucoromycota species possess few glucans, but instead have other monosaccharides such as fucose and glucuronic acid that are almost exclusively found in their cell walls. Additionally, we observed that hexoses (glucose, mannose and galactose) accumulate in much higher proportions in species belonging to Dikarya. Our data demonstrate a clear relationship between phylogenetic position and fungal cell wall carbohydrate composition and lay the foundation for a better understanding of their evolution and their role in plant interactions.

每个真菌细胞都包裹在细胞壁中,细胞壁对细胞存活、形态发生和致病至关重要。关于真菌细胞壁组成的大部分知识都集中在子囊菌,尤其是人类病原体上,但对于早期分化的真菌群,如紫真菌纲和粘菌纲的物种,人们的了解要少得多。为了揭示真菌细胞壁的进化变化,我们研究了 18 个物种细胞壁的单糖组成,其中包括早期分化的真菌以及担子菌门和子囊菌门中的物种,重点是那些具有致病生活方式并与植物有相互作用的真菌。我们的数据显示,几丁质是真菌细胞壁中最具特征性的成分,而且在早期分化的真菌群中所占比例较高。粘菌纲的物种几乎不含葡聚糖,而是在细胞壁中几乎只含有岩藻糖和葡萄糖醛酸等其他单糖。此外,我们还观察到,在属于 Dikarya 的物种中,己糖(葡萄糖、甘露糖和半乳糖)的积累比例要高得多。我们的数据证明了系统发育位置与真菌细胞壁碳水化合物组成之间的明确关系,为更好地了解真菌的进化及其在植物相互作用中的作用奠定了基础。
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引用次数: 0
Impact of secreted glucanases upon the cell surface and fitness of Candida albicans during colonisation and infection 在定植和感染过程中,分泌葡聚糖酶对白色念珠菌细胞表面和适应性的影响
Q1 Immunology and Microbiology Pub Date : 2024-06-01 DOI: 10.1016/j.tcsw.2024.100128
Qinxi Ma , Arnab Pradhan , Ian Leaves , Emer Hickey , Elena Roselletti , Ivy Dambuza , Daniel E. Larcombe , Leandro Jose de Assis , Duncan Wilson , Lars P. Erwig , Mihai G. Netea , Delma S. Childers , Gordon D. Brown , Neil A.R. Gow , Alistair J.P. Brown

Host recognition of the pathogen-associated molecular pattern (PAMP), β-1,3-glucan, plays a major role in antifungal immunity. β-1,3-glucan is an essential component of the inner cell wall of the opportunistic pathogen Candida albicans. Most β-1,3-glucan is shielded by the outer cell wall layer of mannan fibrils, but some can become exposed at the cell surface. In response to host signals such as lactate, C. albicans shaves the exposed β-1,3-glucan from its cell surface, thereby reducing the ability of innate immune cells to recognise and kill the fungus. We have used sets of barcoded xog1 and eng1 mutants to compare the impacts of the secreted β-glucanases Xog1 and Eng1 upon C. albicans in vitro and in vivo. Flow cytometry of Fc-dectin-1-stained strains revealed that Eng1 plays the greater role in lactate-induced β-1,3-glucan masking. Transmission electron microscopy and stress assays showed that neither Eng1 nor Xog1 are essential for cell wall maintenance, but the inactivation of either enzyme compromised fungal adhesion to gut and vaginal epithelial cells. Competitive barcode sequencing suggested that neither Eng1 nor Xog1 strongly influence C. albicans fitness during systemic infection or vaginal colonisation in mice. However, the deletion of XOG1 enhanced C. albicans fitness during gut colonisation. We conclude that both Eng1 and Xog1 exert subtle effects on the C. albicans cell surface that influence fungal adhesion to host cells and that affect fungal colonisation in certain host niches.

宿主对病原体相关分子模式(PAMP)β-1,3-葡聚糖的识别在抗真菌免疫中发挥着重要作用。β-1,3-葡聚糖是机会性病原体白色念珠菌内细胞壁的重要组成部分。大部分 β-1,3-葡聚糖被细胞外壁的甘露聚糖纤维层所保护,但也有一部分暴露在细胞表面。为了对乳酸等宿主信号做出反应,白念珠菌会将暴露的 β-1,3-葡聚糖从细胞表面刮掉,从而降低先天性免疫细胞识别和杀死真菌的能力。我们利用一组条形码 Xog1 和 Eng1 突变体,比较了分泌型 β-葡聚糖酶 Xog1 和 Eng1 在体外和体内对白僵菌的影响。Fc-Dectin-1染色菌株的流式细胞仪显示,Eng1在乳酸盐诱导的β-1,3-葡聚糖掩蔽中发挥了更大的作用。透射电子显微镜和压力试验表明,Eng1 和 Xog1 对细胞壁的维持都不是必需的,但这两种酶的失活都会影响真菌对肠道和阴道上皮细胞的粘附。竞争性条形码测序表明,在小鼠全身感染或阴道定植过程中,Eng1 和 Xog1 都不会对白僵菌的适应性产生强烈影响。然而,删除 XOG1 会增强白僵菌在肠道定植过程中的适应性。我们的结论是,Eng1 和 Xog1 对白僵菌细胞表面都有微妙的影响,它们影响真菌对宿主细胞的粘附,并影响真菌在某些宿主壁龛中的定殖。
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引用次数: 0
Erratum to “Fungal cell wall components modulate our immune system” [Cell Surf. 7 (2021) 100067] 对《真菌细胞壁成分调节我们的免疫系统》的勘误 [Cell Surf.
Q1 Immunology and Microbiology Pub Date : 2024-06-01 DOI: 10.1016/j.tcsw.2024.100119
Benoit Briard , Thierry Fontaine , Thirumala-Devi Kanneganti , Neil A.R. Gow , Nicolas Papon
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引用次数: 0
Powerful cell wall biomass degradation enzymatic system from saprotrophic Aspergillus fumigatus 腐生曲霉强大的细胞壁生物质降解酶系统
Q1 Immunology and Microbiology Pub Date : 2024-05-21 DOI: 10.1016/j.tcsw.2024.100126
Lige Tong , Yunaying Li , Xinke Lou , Bin Wang , Cheng Jin , Wenxia Fang

Cell wall biomass, Earth’s most abundant natural resource, holds significant potential for sustainable biofuel production. Composed of cellulose, hemicellulose, lignin, pectin, and other polymers, the plant cell wall provides essential structural support to diverse organisms in nature. In contrast, non-plant species like insects, crustaceans, and fungi rely on chitin as their primary structural polysaccharide. The saprophytic fungus Aspergillus fumigatus has been widely recognized for its adaptability to various environmental conditions. It achieves this by secreting different cell wall biomass degradation enzymes to obtain essential nutrients. This review compiles a comprehensive collection of cell wall degradation enzymes derived from A. fumigatus, including cellulases, hemicellulases, various chitin degradation enzymes, and other polymer degradation enzymes. Notably, these enzymes exhibit biochemical characteristics such as temperature tolerance or acid adaptability, indicating their potential applications across a spectrum of industries.

细胞壁生物质是地球上最丰富的自然资源,具有生产可持续生物燃料的巨大潜力。植物细胞壁由纤维素、半纤维素、木质素、果胶和其他聚合物组成,为自然界中的各种生物提供重要的结构支持。相比之下,昆虫、甲壳类动物和真菌等非植物物种则依赖甲壳素作为主要的结构多糖。烟曲霉(Aspergillus fumigatus)因其对各种环境条件的适应性而广为人知。它通过分泌不同的细胞壁生物质降解酶来获得必需的营养物质。本综述全面收集了从烟曲霉中提取的细胞壁降解酶,包括纤维素酶、半纤维素酶、各种几丁质降解酶和其他聚合物降解酶。值得注意的是,这些酶具有耐温性或酸适应性等生化特性,显示了它们在各行各业的潜在应用。
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引用次数: 0
Formative evaluation and structural analysis of non-tuberculosis mycobacterial biofilm using material pieces 利用材料碎片对非结核分枝杆菌生物膜进行形成性评估和结构分析
Q1 Immunology and Microbiology Pub Date : 2024-05-14 DOI: 10.1016/j.tcsw.2024.100125
Kentaro Yamamoto , Shota Torigoe , Hirotaka Kobayashi

Non-tuberculosis mycobacteria (NTM) can form biofilms on diverse artificial surfaces. In the present study, we induced NTM biofilm formation on materials used in various medical devices, evaluated the total amount of biofilm, and observed the ultrastructure by scanning electron microscopy.

非结核分枝杆菌(NTM)可在各种人工表面形成生物膜。在本研究中,我们诱导 NTM 在各种医疗设备所用材料上形成生物膜,评估生物膜的总量,并通过扫描电子显微镜观察其超微结构。
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引用次数: 0
Leucine rich repeat-malectin receptor kinases IGP1/CORK1, IGP3 and IGP4 are required for arabidopsis immune responses triggered by β-1,4-D-Xylo-oligosaccharides from plant cell walls 植物细胞壁中的β-1,4-D-木寡糖引发的拟南芥免疫反应需要富亮氨酸重复-malectin受体激酶 IGP1/CORK1、IGP3 和 IGP4 的参与
Q1 Immunology and Microbiology Pub Date : 2024-04-04 DOI: 10.1016/j.tcsw.2024.100124
Patricia Fernández-Calvo , Gemma López , Marina Martín-Dacal , Meriem Aitouguinane , Cristian Carrasco-López , Sara González-Bodí , Laura Bacete , Hugo Mélida , Andrea Sánchez-Vallet , Antonio Molina

Pattern-Triggered Immunity (PTI) in plants is activated upon recognition by Pattern Recognition Receptors (PRRs) of Damage- and Microbe-Associated Molecular Patterns (DAMPs and MAMPs) from plants or microorganisms, respectively. An increasing number of identified DAMPs/MAMPs are carbohydrates from plant cell walls and microbial extracellular layers, which are perceived by plant PRRs, such as LysM and Leucine Rich Repeat-Malectin (LRR-MAL) receptor kinases (RKs). LysM-RKs (e.g. CERK1, LYK4 and LYK5) are needed for recognition of fungal MAMP chitohexaose (β-1,4-D-(GlcNAc)6, CHI6), whereas IGP1/CORK1, IGP3 and IGP4 LRR-MAL RKs are required for perception of β-glucans, like cellotriose (β-1,4-D-(Glc)3, CEL3) and mixed-linked glucans. We have explored the diversity of carbohydrates perceived by Arabidopsis thaliana seedlings by determining PTI responses upon treatment with different oligosaccharides and polysaccharides. These analyses revealed that plant oligosaccharides from xylans [β-1,4-D-(xylose)4 (XYL4)], glucuronoxylans and α-1,4-glucans, and polysaccharides from plants and seaweeds activate PTI. Cross-elicitation experiments of XYL4 with other glycans showed that the mechanism of recognition of XYL4 and the DAMP 33-α-L-arabinofuranosyl-xylotetraose (XA3XX) shares some features with that of CEL3 but differs from that of CHI6. Notably, XYL4 and XA3XX perception is impaired in igp1/cork1, igp3 and igp4 mutants, and almost not affected in cerk1 lyk4 lyk5 triple mutant. XYL4 perception is conserved in different plant species since XYL4 pre-treatment triggers enhanced disease resistance in tomato to Pseudomonas syringae pv tomato DC3000 and PTI responses in wheat. These results expand the number of glycans triggering plant immunity and support IGP1/CORK1, IGP3 and IGP4 relevance in Arabidopsis thaliana glycans perception and PTI activation.

Significance Statement

The characterization of plant immune mechanisms involved in the perception of carbohydrate-based structures recognized as DAMPs/MAMPs is needed to further understand plant disease resistance modulation. We show here that IGP1/CORK1, IGP3 and IGP4 LRR-MAL RKs are required for the perception of carbohydrate-based DAMPs β-1,4-D-(xylose)4 (XYL4) and 33-α-L-arabinofuranosyl-xylotetraose (XA3XX), further expanding the function of these LRR-MAL RKs in plant glycan perception and immune activation.

植物的模式诱导免疫(PTI)是由模式识别受体(PRR)分别识别来自植物或微生物的损伤和微生物相关分子模式(DAMPs 和 MAMPs)后激活的。越来越多已确定的 DAMPs/MAMPs 是来自植物细胞壁和微生物胞外层的碳水化合物,可被植物 PRRs(如 LysM 和富亮氨酸重复-大孔蛋白(LRR-MAL)受体激酶 (RKs))感知。LysM-RKs (如 CERK1、LYK4 和 LYK5)是识别真菌 MAMP 菊糖(β-1,4-D-(GlcNAc)6,CHI6)所必需的,而 IGP1/CORK1、IGP3 和 IGP4 LRR-MAL RKs 则是感知β-葡聚糖(如纤维三糖(β-1,4-D-(Glc)3,CEL3)和混合连接葡聚糖)所必需的。我们通过测定拟南芥幼苗对不同寡糖和多糖处理后的 PTI 反应,探索了拟南芥幼苗感知碳水化合物的多样性。这些分析表明,来自木聚糖[β-1,4-D-(木糖)4 (XYL4)]、葡萄糖醛酸和α-1,4-葡聚糖的植物寡糖以及来自植物和海藻的多糖能激活 PTI。XYL4 与其他聚糖的交叉激发实验表明,XYL4 和 DAMP 33-α-L-arabinofuranosyl-xylotetraose (XA3XX) 的识别机制与 CEL3 的识别机制有一些相同之处,但与 CHI6 的识别机制不同。值得注意的是,igp1/cork1、igp3 和 igp4 突变体对 XYL4 和 XA3XX 的感知能力受损,而 cerk1 lyk4 lyk5 三重突变体几乎不受影响。XYL4 的感知在不同植物物种中是保守的,因为 XYL4 预处理会增强番茄对 Pseudomonas syringae pv tomato DC3000 的抗病性和小麦的 PTI 反应。这些结果扩大了触发植物免疫的糖类的数量,并支持 IGP1/CORK1、IGP3 和 IGP4 在拟南芥糖类感知和 PTI 激活中的相关性。我们在此表明,IGP1/CORK1、IGP3 和 IGP4 LRR-MAL RKs 是感知基于碳水化合物的 DAMPs β-1,4-D-(xylose)4 (XYL4) 和 33-α-L-arabinofuranosyl-xylotetraose (XA3XX) 所必需的,进一步拓展了这些 LRR-MAL RKs 在植物聚糖感知和免疫激活中的功能。
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引用次数: 0
Metabolic modulation: Pneumocystis phosphoglucomutase is a target influencing host recognition 代谢调节:肺孢子虫磷酸葡聚糖酶是影响宿主识别的靶标
Q1 Immunology and Microbiology Pub Date : 2024-03-25 DOI: 10.1016/j.tcsw.2024.100123
Theodore J. Kottom , Eva M. Carmona , Bernd Lepenies , Andrew H. Limper

Herein, this manuscript explores the significance of the phosphoglucomutase (PGM) enzyme in Pneumocystis spp., focusing on its role in fungal surface mannoprotein formation. Through expression of the Pneumocystis murina Pmpgm2 in a Saccharomyces cerevisiae pgm2Δ strain, we demonstrate restoration of binding to the mannose receptor (MR) and macrophages to wildtype yeast levels in this complemented strain. Gas Chromatography-Mass Spectroscopy (GC-MS) confirmed reduced mannose content in the pgm2Δ yeast strain compared to the wild-type and complemented Pmpgm2 cDNA-expressing strains. This study underscores fungal PGM function in dolichol glucosyl phosphate biosynthesis, crucial for proper cell wall mannoprotein formation. Furthermore, highlighting the conservation of targetable cysteine residues across fungal pathogens, PGM inhibition maybe a potential therapeutic strategy against a broad spectrum of fungal infections.

在此,本手稿探讨了肺炎囊菌属中磷酸葡萄糖转氨酶(PGM)的意义,重点是其在真菌表面甘露糖蛋白形成中的作用。通过在酿酒酵母 pgm2Δ 菌株中表达鼠肺孢子虫 Pmpgm2,我们证明在这种互补菌株中,与甘露糖受体(MR)和巨噬细胞的结合恢复到了野生型酵母的水平。气相色谱-质谱(GC-MS)证实,与野生型和 Pmpgm2 cDNA 表达互补株相比,pgm2Δ 酵母菌株中的甘露糖含量降低了。这项研究强调了真菌 PGM 在磷酸 Dolichol 葡萄糖基生物合成中的功能,这对细胞壁甘露糖蛋白的正常形成至关重要。此外,由于真菌病原体的半胱氨酸残基具有可靶向性,因此抑制 PGM 可能是一种针对多种真菌感染的潜在治疗策略。
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引用次数: 0
Top five unanswered questions in bacterial cell wall research 细菌细胞壁研究的五大未解之谜
Q1 Immunology and Microbiology Pub Date : 2024-02-21 DOI: 10.1016/j.tcsw.2024.100122
Sarah M. Batt , Katherine A. Abrahams , Gurdyal S. Besra
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引用次数: 0
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