首页 > 最新文献

Journal of Photochemistry and Photobiology C: Photochemistry Reviews最新文献

英文 中文
Controlled optical manipulation and sorting of nanomaterials enabled by photonic and plasmonic nanodevices 利用光子和等离子体纳米器件实现纳米材料的可控光学操作和分类
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100534
Christophe Pin , Hideki Fujiwara , Keiji Sasaki

Precise manipulation and sorting of nanomaterials cannot rely on techniques used for micro- and macro-scale objects because of their nanoscale size, which is smaller than the diffraction limit, and their fast Brownian diffusion. To overcome the limitations of standard optical tweezers, new techniques have recently emerged that make use of optical forces acting on nanomaterials in the vicinity of photonic and plasmonic nanostructures. This review focuses on the techniques that have been recently developed to either optically transport, sort, trap, rotate, assemble, or deposit nanomaterials using photonic or plasmonic devices. The first part is dedicated to the optical transport and sorting of nanomaterials using photonic waveguides. The second part provides an overview of the recent work on optical trapping and manipulation of nanomaterials using photonic and plasmonic nanoresonators. The third part provides a short summary of recent work on optical trapping and manipulation using metalenses and metasurfaces. This review aims to highlight some specific functionalities enabled by photonic and plasmonic devices that make it possible to tailor the optical forces acting on nanomaterials.

纳米材料的精确操作和分类不能依赖于用于微观和宏观尺度物体的技术,因为它们的纳米尺度小于衍射极限,并且它们的快速布朗扩散。为了克服标准光镊的局限性,最近出现了利用光力作用在光子和等离子体纳米结构附近的纳米材料上的新技术。本文综述了近年来利用光子或等离子体器件进行光传输、分类、捕获、旋转、组装或沉积纳米材料的技术。第一部分是利用光子波导进行纳米材料的光输运和分选。第二部分概述了利用光子和等离子体纳米谐振器对纳米材料进行光捕获和操纵的最新工作。第三部分简要介绍了近年来利用超透镜和超表面进行光捕获和操纵的研究进展。这篇综述的目的是强调光子和等离子体器件所实现的一些特定功能,这些功能使得定制作用在纳米材料上的光力成为可能。
{"title":"Controlled optical manipulation and sorting of nanomaterials enabled by photonic and plasmonic nanodevices","authors":"Christophe Pin ,&nbsp;Hideki Fujiwara ,&nbsp;Keiji Sasaki","doi":"10.1016/j.jphotochemrev.2022.100534","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100534","url":null,"abstract":"<div><p>Precise manipulation and sorting of nanomaterials cannot rely on techniques used for micro- and macro-scale objects because of their nanoscale size, which is smaller than the diffraction limit, and their fast Brownian diffusion. To overcome the limitations of standard optical tweezers, new techniques have recently emerged that make use of optical forces acting on nanomaterials in the vicinity of photonic and plasmonic nanostructures. This review focuses on the techniques that have been recently developed to either optically transport, sort, trap, rotate, assemble, or deposit nanomaterials using photonic or plasmonic devices. The first part is dedicated to the optical transport and sorting of nanomaterials using photonic waveguides. The second part provides an overview of the recent work on optical trapping and manipulation of nanomaterials using photonic and plasmonic nanoresonators. The third part provides a short summary of recent work on optical trapping and manipulation using metalenses and metasurfaces. This review aims to highlight some specific functionalities enabled by photonic and plasmonic devices that make it possible to tailor the optical forces acting on nanomaterials.</p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100534"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"2377540","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Design, photophysical properties, and applications of fluorene-based fluorophores in two-photon fluorescence bioimaging: A review 基于芴的荧光团的设计、光物理性质及其在双光子荧光生物成像中的应用综述
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100529
Janah Shaya , Peter R. Corridon , Basem Al-Omari , Abdulrahman Aoudi , Abeer Shunnar , Mohamed Infas Haja Mohideen , Ahsanulhaq Qurashi , Benoît Y. Michel , Alain Burger

Two-photon fluorescence microscopy (2PFM) emerged as a powerful alternative to conventional one-photon microscopy. 2PFM typically uses two near-infrared (NIR) photons to excite fluorescent dyes, which minimizes light scattering in biological samples. Multiphoton absorption also suppresses background signal and autofluorescence from tissues and allows to achieve higher 3D resolution images with low photodamage and photobleaching. Fluorene dyes possess distinct properties that meet the strict criteria of probes used for 2PFM such as enhanced solubility, photostability, and two-photon absorption cross-section. The fluorene molecule also includes many active positions that allow versatile synthesis, selective functionalization, bioconjugation, and tuning solubility. These properties have led to reporting several fluorene probes including monomers, polymers, and dendrimers with important uses in understanding molecular dynamics and bioimaging. The current review presents a compact summary of fluorene-based fluorophores for 2PFM bioimaging applications, shedding light on structure-photophysical property relationships in fluorenes and polyaromatic probe designs.

双光子荧光显微镜(2PFM)作为传统单光子显微镜的强大替代品而出现。2PFM通常使用两个近红外(NIR)光子来激发荧光染料,从而最大限度地减少生物样品中的光散射。多光子吸收还可以抑制组织的背景信号和自身荧光,从而实现具有低光损伤和光漂白的更高3D分辨率图像。芴染料具有独特的性质,满足用于2PFM的探针的严格标准,如增强的溶解度,光稳定性和双光子吸收截面。芴分子还包括许多活性位置,允许多功能合成,选择性功能化,生物偶联和调节溶解度。这些性质导致了一些芴探针的报道,包括单体、聚合物和树状大分子,在理解分子动力学和生物成像方面具有重要用途。本文综述了基于芴的荧光团在2PFM生物成像中的应用,揭示了芴和多芳探针设计中的结构-光物理性质关系。
{"title":"Design, photophysical properties, and applications of fluorene-based fluorophores in two-photon fluorescence bioimaging: A review","authors":"Janah Shaya ,&nbsp;Peter R. Corridon ,&nbsp;Basem Al-Omari ,&nbsp;Abdulrahman Aoudi ,&nbsp;Abeer Shunnar ,&nbsp;Mohamed Infas Haja Mohideen ,&nbsp;Ahsanulhaq Qurashi ,&nbsp;Benoît Y. Michel ,&nbsp;Alain Burger","doi":"10.1016/j.jphotochemrev.2022.100529","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100529","url":null,"abstract":"<div><p>Two-photon fluorescence microscopy (2PFM) emerged as a powerful alternative to conventional one-photon microscopy. 2PFM typically uses two near-infrared (NIR) photons to excite fluorescent dyes, which minimizes light scattering in biological samples. Multiphoton absorption also suppresses background signal and autofluorescence from tissues and allows to achieve higher 3D resolution images with low photodamage and photobleaching. Fluorene dyes possess distinct properties that meet the strict criteria of probes used for 2PFM such as enhanced solubility, photostability, and two-photon absorption cross-section. The fluorene molecule also includes many active positions that allow versatile synthesis, selective functionalization, bioconjugation, and tuning solubility. These properties have led to reporting several fluorene probes including monomers, polymers, and dendrimers with important uses in understanding molecular dynamics and bioimaging. The current review presents a compact summary of fluorene-based fluorophores for 2PFM bioimaging applications, shedding light on structure-photophysical property relationships in fluorenes and polyaromatic probe designs.</p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100529"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"1612395","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 31
Optical manipulation in conjunction with photochemical/photothermal responses of materials 与材料的光化学/光热反应相结合的光学操作
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100536
Kenji Setoura , Syoji Ito

This article reviews optical manipulation coupled with photochemical/photothermal responses of nanometer sized materials including molecular systems, polymers, and inorganic nanoparticles. After the introduction, section 2 overviews the optical trapping of nanometer sized molecular systems including early-stage studies, such as trapping of polymer chains, micelles, and molecular aggregates in solution at room temperatures. Then, the conformation control of macromolecule assemblies and gels by optical force are introduced, followed by micro-fabrications achieved by combining optical trapping and photochemical reactions. Section 3 summarizes studies on the evaluation of optical force acting on nanometric molecular systems using fluorescence correlation techniques. Approaches to control optical force by using photochemical reactions are show in section 4, where the absorption band of target materials are modified through photochromic reactions, leading to micromechanical motion of small particles synchronizing with the photochemical reactions. Section 5 overviews photothermal effect in optical manipulation such as natural convection, Marangoni convection and thermophoresis, and applications of the thermal effects to develop new methods of micromanipulation achieved by combining optical force and photothermal responses.

本文综述了光学操纵与光化学/光热响应耦合的纳米材料,包括分子体系、聚合物和无机纳米颗粒。在介绍之后,第2节概述了纳米级分子系统的光学捕获,包括早期的研究,如室温下溶液中聚合物链、胶束和分子聚集体的捕获。然后介绍了利用光力控制大分子组装体和凝胶的构象,然后介绍了利用光捕获和光化学反应相结合实现的微加工。第3节总结了利用荧光相关技术评价作用于纳米分子体系的光力的研究。第4节展示了利用光化学反应控制光力的方法,其中通过光致变色反应修饰目标材料的吸收带,导致小颗粒的微机械运动与光化学反应同步。第5节概述了光学操作中的光热效应,如自然对流、马兰戈尼对流和热泳术,以及利用热效应开发结合光力和光热响应实现微操作的新方法。
{"title":"Optical manipulation in conjunction with photochemical/photothermal responses of materials","authors":"Kenji Setoura ,&nbsp;Syoji Ito","doi":"10.1016/j.jphotochemrev.2022.100536","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100536","url":null,"abstract":"<div><p><span>This article reviews optical manipulation coupled with photochemical/photothermal responses of nanometer sized materials including molecular systems, polymers, and inorganic nanoparticles. After the introduction, section 2 overviews the optical trapping of nanometer sized molecular systems including early-stage studies, such as trapping of polymer chains, </span>micelles<span><span>, and molecular aggregates in solution at room temperatures. Then, the conformation control of </span>macromolecule<span><span><span><span> assemblies and gels by optical force are introduced, followed by micro-fabrications achieved by combining optical trapping and photochemical reactions. Section 3 summarizes studies on the evaluation of optical force acting on nanometric molecular systems using fluorescence correlation techniques. Approaches to control optical force by using photochemical reactions are show in section 4, where the absorption band of target materials are modified through photochromic reactions, leading to micromechanical motion of small particles synchronizing with the photochemical reactions. Section 5 overviews photothermal effect in optical manipulation such as </span>natural convection, Marangoni convection and </span>thermophoresis, and applications of the thermal effects to develop new methods of </span>micromanipulation achieved by combining optical force and photothermal responses.</span></span></p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100536"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"1612397","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Theoretical insights into the mechanism of photocatalytic reduction of CO2 over semiconductor catalysts 半导体催化剂上光催化还原CO2机理的理论见解
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100538
Sajjad Hussain , Yanjie Wang , Lingju Guo , Tao He

Photocatalytic reduction of CO2 is one important approach to alleviate greenhouse gas emission and energy crisis, which has gained huge attention in the past decades. However, the lack of understanding complex reaction mechanism impedes new catalysts design. It is also very difficult to understand the mechanism by using only experimental approaches. For this concern, theoretical calculations can effectively supplement the experimental deficiency and thus play an important role. Recently theoretical calculations have been performed on adsorption, migration and reduction of CO2 molecule on the photocatalyst surface, leading to useful information that have contributed greatly to this field. This review summarizes recent advances in first-principles calculations about CO2 photoreduction over various semiconductor photocatalysts like metal oxides, sulfides and g-C3N4. The methods, models, adsorption and reaction pathways have been discussed in detail. The perspective about future investigation on the photocatalytic reduction of CO2 using first principles calculations is also presented.

光催化还原CO2是缓解温室气体排放和缓解能源危机的重要途径之一,近几十年来受到了广泛关注。然而,缺乏对复杂反应机理的了解,阻碍了新催化剂的设计。仅用实验方法也很难理解其机理。对于这一问题,理论计算可以有效地补充实验的不足,从而发挥重要作用。近年来,人们对CO2分子在光催化剂表面的吸附、迁移和还原进行了理论计算,得到了有用的信息,为这一领域的研究做出了重要贡献。本文综述了金属氧化物、硫化物和g-C3N4等半导体光催化剂上CO2光还原第一性原理计算的最新进展。详细讨论了制备方法、模型、吸附和反应途径。最后对利用第一性原理计算光催化还原CO2的研究进行了展望。
{"title":"Theoretical insights into the mechanism of photocatalytic reduction of CO2 over semiconductor catalysts","authors":"Sajjad Hussain ,&nbsp;Yanjie Wang ,&nbsp;Lingju Guo ,&nbsp;Tao He","doi":"10.1016/j.jphotochemrev.2022.100538","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100538","url":null,"abstract":"<div><p><span>Photocatalytic reduction of CO</span><sub>2</sub><span><span> is one important approach to alleviate greenhouse gas emission and energy crisis, which has gained huge attention in the past decades. However, the lack of understanding </span>complex reaction mechanism<span> impedes new catalysts design. It is also very difficult to understand the mechanism by using only experimental approaches. For this concern, theoretical calculations can effectively supplement the experimental deficiency and thus play an important role. Recently theoretical calculations have been performed on adsorption, migration and reduction of CO</span></span><sub>2</sub> molecule on the photocatalyst surface, leading to useful information that have contributed greatly to this field. This review summarizes recent advances in first-principles calculations about CO<sub>2</sub> photoreduction over various semiconductor photocatalysts like metal oxides, sulfides and g-C<sub>3</sub>N<sub>4</sub>. The methods, models, adsorption and reaction pathways have been discussed in detail. The perspective about future investigation on the photocatalytic reduction of CO<sub>2</sub> using first principles calculations is also presented.</p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100538"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"1612398","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 15
Laser-induced forward-transfer with light possessing orbital angular momentum 具有轨道角动量的光的激光诱导正向转移
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100535
Takashige Omatsu , Katsuhiko Miyamoto , Ken-Ichi Yuyama , Keisaku Yamane , Ryuji Morita

Helical light fields may carry both orbital angular and spin angular momentum which is respectively associated with their helical wavefronts (optical vortices) and rotating transverse electric fields. Interestingly, these helical light fields interact with materials and the orbital angular momentum of these fields can physically twist a range of materials, including metals, semiconductors, polymers, and liquids. With the aid of spin angular momentum, these fields can also form a range of helical structures. This light-matter interaction based on transfer of angular momentum has the potential to revolutionize industrial processes and enable technologies, such as advanced non-contact and nozzle-free printing. In this review paper, we focus on this printing technique, a process which we herein refer to as optical vortex laser induced forward transfer, and we show how it can be used for the production of next generation printed photonics/electronics/spintronics devices. Herein we review the interactions between the angular momentum of light and materials, and we discuss the ways in which optical vortices can be used to produce a variety of exotic structures. We also discuss the current state-of-the art of laser-induced forward-transfer technologies and detail some of the most novel devices, which have been fabricated using this optical vortex laser induced forward transfer, including hexagonal close-packed photonic-rings and plasmonic nanocores.

螺旋光场可以同时携带轨道角动量和自旋角动量,这两种角动量分别与它们的螺旋波前(光涡旋)和旋转横向电场有关。有趣的是,这些螺旋光场与材料相互作用,这些场的轨道角动量可以物理扭曲一系列材料,包括金属、半导体、聚合物和液体。借助自旋角动量,这些场还可以形成一系列的螺旋结构。这种基于角动量转移的光-物质相互作用有可能彻底改变工业过程和实现技术,例如先进的非接触和无喷嘴印刷。在这篇综述中,我们重点介绍了这种印刷技术,我们在这里称之为光学涡旋激光诱导前向转移,并展示了如何将其用于生产下一代印刷光子/电子/自旋电子器件。本文回顾了光的角动量与材料之间的相互作用,并讨论了利用光涡旋产生各种奇异结构的方法。我们还讨论了当前激光诱导前向转移技术的现状,并详细介绍了一些最新颖的器件,这些器件已经使用这种光学涡旋激光诱导前向转移制造,包括六边形密排光子环和等离子体纳米核。
{"title":"Laser-induced forward-transfer with light possessing orbital angular momentum","authors":"Takashige Omatsu ,&nbsp;Katsuhiko Miyamoto ,&nbsp;Ken-Ichi Yuyama ,&nbsp;Keisaku Yamane ,&nbsp;Ryuji Morita","doi":"10.1016/j.jphotochemrev.2022.100535","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100535","url":null,"abstract":"<div><p>Helical light fields may carry both orbital angular and spin angular momentum which is respectively associated with their helical wavefronts (optical vortices) and rotating transverse electric fields. Interestingly, these helical light fields interact with materials and the orbital angular momentum of these fields can physically twist a range of materials, including metals, semiconductors, polymers, and liquids. With the aid of spin angular momentum, these fields can also form a range of helical structures. This light-matter interaction based on transfer of angular momentum has the potential to revolutionize industrial processes and enable technologies, such as advanced non-contact and nozzle-free printing. In this review paper, we focus on this printing technique, a process which we herein refer to as optical vortex laser induced forward transfer, and we show how it can be used for the production of next generation printed photonics/electronics/spintronics devices. Herein we review the interactions between the angular momentum of light and materials, and we discuss the ways in which optical vortices can be used to produce a variety of exotic structures. We also discuss the current state-of-the art of laser-induced forward-transfer technologies and detail some of the most novel devices, which have been fabricated using this optical vortex laser induced forward transfer, including hexagonal close-packed photonic-rings and plasmonic nanocores.</p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100535"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"3210083","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Understanding the complete bioluminescence cycle from a multiscale computational perspective: A review 从多尺度计算的角度理解完整的生物发光周期:综述
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100537
Ya-Jun Liu

Bioluminescence (BL) is an amazing natural phenomenon whose visible light is produced by living organisms. BL phenomenon is quite pervasive and has been observed in 17 phyla of 4 kingdoms. This fascinating natural phenomenon has unceasingly attracted people’s curiosity from ancient era to today. For a very long time, we can only receive some sporadic and static information from experimental observations, the mechanism of most BL remains is unclear. How the chemical reaction of BL process is initiated? Where the energy for light emission comes from? How does the light emitter produce? What is the light emitter for a wild bioluminescent organism? How to regain luciferin for next bioluminescence when it is used up? The luciferin is utilized forthwith or stored and release for subsequent light emission? What factors affect the color and strength of a bioluminescence? How to artificially tune the bioluminescence for special application? Computational BL plays unreplaceable role in answering these mechanistic questions. In contrast with experimental BL, computational BL came very late. In the past two decades, computational BL has touched nearly all the bioluminescent systems with chemical bases via the method of multiscale simulation. In this review, the author firstly introduced the history, types and general chemical process of BL. Then, the computational scheme on BL was briefly epitomized. Using firefly BL as a paradigmatic case, the author summarized theoretical investigation on the six stages of general chemical process in a BL cycle: luciferin oxidation, peroxide thermolysis, light emission, luciferin regeneration, luciferin storage and luciferin release. At each stage, the available theoretical studies of other bioluminescent organisms are briefly introduced and compared with the firefly system. Basing on the mechanistic understanding, the author reviewed the up-to-date theoretical design on bioluminescent systems. Again, the firefly was mainly focused on, and the other possible systems were just briefly introduced. This review summarized the theoretical studies to date on BL and addressed the status, critical challenges and future prospects of computational BL.

生物发光是一种奇妙的自然现象,它是由生物体产生的可见光。BL现象十分普遍,已在4个界17个门中发现。从古至今,这一迷人的自然现象不断吸引着人们的好奇心。长期以来,我们只能从实验观察中获得一些零星和静态的信息,大多数BL的机制仍然不清楚。BL工艺的化学反应是如何开始的?发光的能量从何而来?光发射器是如何产生的?什么是野生发光生物的发光体?荧光素用完后如何重新获得下一次生物发光?荧光素是立即使用还是储存并释放用于后续的发光?什么因素影响生物发光的颜色和强度?如何人为调节特殊用途的生物发光?计算BL在回答这些机械性问题方面发挥着不可替代的作用。与实验BL相比,计算BL出现得很晚。近二十年来,通过多尺度模拟的方法,计算BL几乎触及了所有含化学碱的生物发光系统。本文首先介绍了BL的历史、类型和一般化学过程,然后简要概述了BL的计算方案。以萤火虫BL为例,对BL循环中荧光素氧化、过氧化物热解、发光、荧光素再生、荧光素储存和荧光素释放六个阶段的一般化学过程进行了理论研究。在每个阶段,简要介绍了其他生物发光系统的现有理论研究,并与萤火虫系统进行了比较。在对生物发光机理认识的基础上,综述了生物发光系统的最新理论设计。同样,主要关注的是萤火虫,其他可能的系统只是简要介绍。本文综述了迄今为止的理论研究成果,并对计算型生物信息学的现状、面临的主要挑战和未来发展前景进行了展望。
{"title":"Understanding the complete bioluminescence cycle from a multiscale computational perspective: A review","authors":"Ya-Jun Liu","doi":"10.1016/j.jphotochemrev.2022.100537","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100537","url":null,"abstract":"<div><p><span>Bioluminescence (BL) is an amazing natural phenomenon whose visible light is produced by living organisms. BL phenomenon is quite pervasive and has been observed in 17 phyla of 4 kingdoms. This fascinating natural phenomenon has unceasingly attracted people’s curiosity from ancient era to today. For a very long time, we can only receive some sporadic and static information from experimental observations, the mechanism of most BL remains is unclear. How the chemical reaction of BL process is initiated? Where the energy for light emission comes from? How does the light emitter produce? What is the light emitter for a wild bioluminescent organism? How to regain luciferin for next bioluminescence when it is used up? The luciferin is utilized forthwith or stored and release for subsequent light emission? What factors affect the color and strength of a bioluminescence? How to artificially tune the bioluminescence for special application? Computational BL plays unreplaceable role in answering these mechanistic questions. In contrast with experimental BL, computational BL came very late. In the past two decades, computational BL has touched nearly all the bioluminescent systems with chemical bases via the method of multiscale simulation. In this review, the author firstly introduced the history, types and general chemical process of BL. Then, the computational scheme on BL was briefly epitomized. Using firefly BL as a paradigmatic case, the author summarized theoretical investigation on the six stages of general chemical process in a BL cycle: luciferin </span>oxidation, peroxide thermolysis, light emission, luciferin regeneration, luciferin storage and luciferin release. At each stage, the available theoretical studies of other bioluminescent organisms are briefly introduced and compared with the firefly system. Basing on the mechanistic understanding, the author reviewed the up-to-date theoretical design on bioluminescent systems. Again, the firefly was mainly focused on, and the other possible systems were just briefly introduced. This review summarized the theoretical studies to date on BL and addressed the status, critical challenges and future prospects of computational BL.</p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100537"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"1612399","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Beyond green with synthetic chlorophylls – Connecting structural features with spectral properties 超越绿色与合成叶绿素-连接结构特征与光谱特性
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100513
Masahiko Taniguchi , David F. Bocian , Dewey Holten , Jonathan S. Lindsey

The distinct features of chlorophylls in photosynthesis have led to the formation of numerous derivatives for applications encompassing solar energy conversion, molecular photonics, photodynamic therapy, and molecular imaging. Synthetic chlorins created de novo and bearing a geminal dimethyl group in the reduced ring have proved invaluable for fundamental studies. Four decades of research have led to accumulation of tabulated spectra for > 400 such synthetic chlorins with distinct structural frameworks (17-oxochlorins, 131-oxophorbines, chlorinimides) and substituents (alkyl, aryl, ethynyl, phenylethynyl, acetyl, formyl) located at specific (meso, β) positions. In this review, spectral traces (324 absorption, 247 fluorescence) are assembled along with photophysical data including the molar absorption coefficient (ε), fluorescence quantum yield (Φf) and singlet excited-state lifetime (τs). The review uses the accumulated spectral data derived from chlorins all containing a uniform molecular scaffold to (1) highlight the effects of molecular structure on spectral features, and (2) identify trends including how ε, Φf and τs vary with wavelength and other features. Use of a common geminal-dimethyl-substituted chlorin scaffold – beginning with no substituents, to one substituent at designated sites, and to 2 or more substituents – provides a systematic Aufbau approach for understanding the absorption spectra of chlorins on a path to and beyond the native chlorophylls. The review provides insights concerning the rational design of potent analogues of Nature’s preeminent red-region absorbers for potential utilization in diverse applications and is aimed at multiple audiences: those interested in spectral properties, tetrapyrrole photophysics, and the molecular design of new chromophores.

叶绿素在光合作用中的独特特性导致了其衍生物的大量应用,包括太阳能转换、分子光子学、光动力治疗和分子成像。从头合成并在还原环上带有双甲基的氯被证明对基础研究是无价的。40年的研究积累了> 400种具有不同结构框架(17-氧氯,131-氧芴,氯酰亚胺)和位于特定(中位,β)位置的取代基(烷基,芳基,乙基,苯乙基,乙酰基,甲酰基)的合成氯的制表光谱。在这篇综述中,我们组装了光谱轨迹(324吸收,247荧光)以及光物理数据,包括摩尔吸收系数(ε),荧光量子产率(Φf)和单线态激发态寿命(τs)。本文利用积累的含有统一分子支架的氯的光谱数据(1)强调分子结构对光谱特征的影响,(2)确定ε, Φf和τs随波长和其他特征的变化趋势。使用常见的二甲基取代氯支架-从没有取代基开始,到指定位置的一个取代基,再到2个或更多取代基-为理解氯在通往和超越天然叶绿素的路径上的吸收光谱提供了系统的分析方法。这篇综述提供了关于合理设计自然界卓越的红区吸收剂的有效类似物以用于各种应用的见解,并针对多种受众:对光谱性质,四吡咯光物理和新发色团的分子设计感兴趣的人。
{"title":"Beyond green with synthetic chlorophylls – Connecting structural features with spectral properties","authors":"Masahiko Taniguchi ,&nbsp;David F. Bocian ,&nbsp;Dewey Holten ,&nbsp;Jonathan S. Lindsey","doi":"10.1016/j.jphotochemrev.2022.100513","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100513","url":null,"abstract":"<div><p><span><span>The distinct features of chlorophylls in photosynthesis have led to the formation of numerous derivatives for applications encompassing solar energy conversion, molecular photonics, photodynamic therapy, and molecular imaging. Synthetic </span>chlorins created </span><em>de novo</em> and bearing a geminal dimethyl group in the reduced ring have proved invaluable for fundamental studies. Four decades of research have led to accumulation of tabulated spectra for &gt; 400 such synthetic chlorins with distinct structural frameworks (17-oxochlorins, 13<sup>1</sup><span>-oxophorbines, chlorinimides) and substituents (alkyl, aryl, ethynyl<span><span>, phenylethynyl, acetyl, formyl) located at specific (meso, β) positions. In this review, spectral traces (324 absorption, 247 fluorescence) are assembled along with photophysical data including the molar absorption coefficient (ε), </span>fluorescence quantum yield (Φ</span></span><sub>f</sub>) and singlet excited-state lifetime (τ<sub>s</sub><span>). The review uses the accumulated spectral data derived from chlorins all containing a uniform molecular scaffold to (1) highlight the effects of molecular structure on spectral features, and (2) identify trends including how ε, Φ</span><sub>f</sub> and τ<sub>s</sub><span><span> vary with wavelength and other features. Use of a common geminal-dimethyl-substituted chlorin scaffold – beginning with no substituents, to one substituent at designated sites, and to 2 or more substituents – provides a systematic Aufbau approach for understanding the absorption spectra of chlorins on a path to and beyond the native chlorophylls. The review provides insights concerning the rational design of potent analogues of Nature’s preeminent red-region absorbers for potential utilization in diverse applications and is aimed at multiple audiences: those interested in spectral properties, tetrapyrrole </span>photophysics<span>, and the molecular design of new chromophores.</span></span></p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100513"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"3210082","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 10
Optical trapping in micro- and nanoconfinement systems: Role of thermo-fluid dynamics and applications 微纳米约束系统中的光捕获:热流体动力学的作用及其应用
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100533
Tetsuro Tsuji , Kentaro Doi , Satoyuki Kawano

In this mini-review, recent advances on the role of a focused laser in micro- and nanofluidic systems is widely introduced with special interest in thermo-fluid dynamical aspects and their importance in optical manipulation. As a brief introduction to microfluidic systems, we describe the advantages and challenges of the use of micro- and nanoscale confinement in optical trapping, as well as standard fabrication techniques for micro- and nanofluidic systems. From thermo-fluid dynamical viewpoints, various phenomena that accompany a laser irradiation to fluidic devices, are explained in detail. These phenomena can affect the optical trapping of target materials significantly, and are classified into two categories: one that induces the fluid flow around the target and another that directly acts on it as an external force. These classes are reviewed by shedding light on some recent cutting-edge researches for optical manipulation. Some applications using thermo-fluid dynamics in microfluidic systems for the measurement of optical forces and for the separation, measurement, and detection of target materials are also introduced.

在这篇简短的综述中,广泛介绍了聚焦激光在微和纳米流体系统中的作用的最新进展,特别关注热流体动力学方面及其在光学操纵中的重要性。作为对微流体系统的简要介绍,我们描述了在光学捕获中使用微和纳米尺度约束的优点和挑战,以及微和纳米流体系统的标准制造技术。从热流体动力学的观点,各种现象伴随激光照射流体装置,详细解释。这些现象可以显著地影响目标材料的光学捕获,并分为两类:一类是诱导流体在目标周围流动,另一类是作为外力直接作用于目标。对这些课程进行了回顾,揭示了一些最新的光学操纵的前沿研究。本文还介绍了热流体动力学在微流体系统中用于光学力测量和目标材料的分离、测量和检测的一些应用。
{"title":"Optical trapping in micro- and nanoconfinement systems: Role of thermo-fluid dynamics and applications","authors":"Tetsuro Tsuji ,&nbsp;Kentaro Doi ,&nbsp;Satoyuki Kawano","doi":"10.1016/j.jphotochemrev.2022.100533","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100533","url":null,"abstract":"<div><p>In this mini-review, recent advances on the role of a focused laser in micro- and nanofluidic systems is widely introduced with special interest in thermo-fluid dynamical aspects and their importance in optical manipulation. As a brief introduction to microfluidic systems, we describe the advantages and challenges of the use of micro- and nanoscale confinement in optical trapping, as well as standard fabrication techniques for micro- and nanofluidic systems. From thermo-fluid dynamical viewpoints, various phenomena that accompany a laser irradiation to fluidic devices, are explained in detail. These phenomena can affect the optical trapping of target materials significantly, and are classified into two categories: one that induces the fluid flow around the target and another that directly acts on it as an external force. These classes are reviewed by shedding light on some recent cutting-edge researches for optical manipulation. Some applications using thermo-fluid dynamics in microfluidic systems for the measurement of optical forces and for the separation, measurement, and detection of target materials are also introduced.</p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100533"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"2891929","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Nanoscale optical imaging with photoinduced force microscopy in heterodyne amplitude modulation and heterodyne frequency modulation modes 外差调幅和外差调频模式下的光致力显微镜纳米光学成像
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/j.jphotochemrev.2022.100532
Junsuke Yamanishi , Yan Jun Li , Yoshitaka Naitoh , Yasuhiro Sugawara

In this review, we introduce the operating principle of photoinduced force microscopy (PiFM) and its applications. First, we introduce that the photoinduced force includes the gradient force and the scattering force. Next, we explain how to eliminate the effects of photothermal effects on the metal tip and sample surface caused by light irradiation. Then, we introduce a PiFM operating in air based on the tapping mode and present images of SiNc clusters. Furthermore, we introduce a PiFM operating in vacuum based on the frequency modulation (FM) mode, and present the results of three-dimensional photo-induced force vector measurements of semiconductor quantum dots.

本文介绍了光致力显微镜(PiFM)的工作原理及其应用。首先,我们介绍了光致力包括梯度力和散射力。接下来,我们解释了如何消除光照射对金属尖端和样品表面的光热效应的影响。然后,我们介绍了一种基于自攻模式的PiFM,并给出了SiNc簇的当前图像。此外,我们还介绍了一种基于调频(FM)模式的真空PiFM,并给出了半导体量子点的三维光致力矢量测量结果。
{"title":"Nanoscale optical imaging with photoinduced force microscopy in heterodyne amplitude modulation and heterodyne frequency modulation modes","authors":"Junsuke Yamanishi ,&nbsp;Yan Jun Li ,&nbsp;Yoshitaka Naitoh ,&nbsp;Yasuhiro Sugawara","doi":"10.1016/j.jphotochemrev.2022.100532","DOIUrl":"https://doi.org/10.1016/j.jphotochemrev.2022.100532","url":null,"abstract":"<div><p>In this review, we introduce the operating principle of photoinduced force microscopy<span> (PiFM) and its applications. First, we introduce that the photoinduced force includes the gradient force and the scattering force. Next, we explain how to eliminate the effects of photothermal effects on the metal tip and sample surface caused by light irradiation<span>. Then, we introduce a PiFM operating in air based on the tapping mode and present images of SiNc clusters. Furthermore, we introduce a PiFM operating in vacuum based on the frequency modulation (FM) mode, and present the results of three-dimensional photo-induced force vector measurements of semiconductor quantum dots.</span></span></p></div>","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100532"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"3021424","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
IFC(EDITORIAL BOARD) 国际金融公司(编辑部)
IF 13.6 1区 化学 Q1 CHEMISTRY, PHYSICAL Pub Date : 2022-09-01 DOI: 10.1016/S1389-5567(22)00060-0
{"title":"IFC(EDITORIAL BOARD)","authors":"","doi":"10.1016/S1389-5567(22)00060-0","DOIUrl":"https://doi.org/10.1016/S1389-5567(22)00060-0","url":null,"abstract":"","PeriodicalId":376,"journal":{"name":"Journal of Photochemistry and Photobiology C: Photochemistry Reviews","volume":"52 ","pages":"Article 100541"},"PeriodicalIF":13.6,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"3210081","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Photochemistry and Photobiology C: Photochemistry Reviews
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1