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Analysis of the Time Course of the Establishment of Systemic Gene Silencing by Barley Stripe Mosaic Virus Virus-Induced Gene Silencing in Wheat 大麦条纹花叶病毒病毒诱导的小麦系统基因沉默的时间过程分析
Q4 Agricultural and Biological Sciences Pub Date : 2024-02-14 DOI: 10.3390/ijpb15010011
Anshu Garg, Amanda S. Brandt, Steven R. Scofield
Wheat is one of the major sources of protein worldwide. Its hexaploidy significantly complicates the identification of genes that may be crucial for improving wheat production to meet the challenges of an increased world population and climate change. Virus-induced gene silencing (VIGS) using Barley stripe mosaic virus (BSMV)-based constructs has proven to be a very useful tool in the analysis of gene function in the hexaploid plant, wheat. However, most published applications of this technique focus on phenotypes that can be observed in the leaves of wheat. A few studies have reported successful VIGS in the spikes of wheat, but this has proven to be more difficult than the seedling leaf assays. This study reports a time course analysis of the movement of BSMV from the site of inoculation into the meristematic region of wheat. It also describes how the photobleaching phenotype resulting from silencing phytoene desaturase (PDS), which is often used as a reporter for VIGS, does not indicate the full extent of where VIGS occurs, and this can mislead scientists as they design silencing studies. These findings provide guidance for more effective VIGS studies to determine the function of genes expressed in the spikes of wheat and may be important for wheat improvement.
小麦是全球蛋白质的主要来源之一。小麦的六倍体性大大增加了鉴定基因的难度,而这些基因可能对提高小麦产量以应对世界人口增长和气候变化的挑战至关重要。事实证明,使用基于大麦条纹花叶病毒(BSMV)的构建体进行病毒诱导基因沉默(VIGS)是分析小麦这种六倍体植物基因功能的非常有用的工具。然而,大多数已发表的该技术应用都集中在小麦叶片上可观察到的表型上。有少数研究报告称在小麦穗上成功地进行了 VIGS,但事实证明这比幼苗叶片试验更加困难。本研究报告分析了 BSMV 从接种部位进入小麦分生区的时间过程。研究还描述了沉默植物烯去饱和酶(PDS)所导致的光漂白表型(PDS 通常被用作 VIGS 的报告物)并不能说明 VIGS 发生的全部范围,这可能会误导科学家设计沉默研究。这些发现为更有效的 VIGS 研究提供了指导,以确定在小麦穗中表达的基因的功能,并可能对小麦改良具有重要意义。
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引用次数: 0
Effect of Herbicides on Forage Dry Matter Yield and Plant Density in the Old Arable Lands in Communal Area of the Eastern Cape Province, South Africa 除草剂对南非东开普省公社地区老耕地牧草干物质产量和植物密度的影响
Q4 Agricultural and Biological Sciences Pub Date : 2024-01-29 DOI: 10.3390/ijpb15010010
Wandile Mashece, S. T. Beyene, M. Mndela, Gideon Jordaan, U. Gulwa, S. Tokozwayo
With the world’s population growing at an alarming rate, there is an urgent need to improve food security. This study aimed to assess forage dry matter yield and plant density under different herbicide treatments at Kubedlana arable lands. The study was carried out using eight treatments consisting of seven herbicide treatments and a control. Seed mixtures of seven legume species were broadcasted in 24 plots of 3 m × 5 m size. Herbicide treatments including Bendioxide (BEN), Glyphosate (GLY), Haloxyfop-R methyl (HAL), Haloxyfop-R methyl and Bendioxide (HBE), Paraquat (PAR), Bendioxide (BRR), and Paraquat (PRR) were applied individually in three plots. Dry matter production and plant densities were determined in five randomly distributed 0.25 m2 quadrats per plot. The results revealed that GLY had a significantly (p < 0.05) higher effect on the DM yield compared with other treatments. Both BRR and HBE significantly (p < 0.05) decreased the DM yield. GLY and HBE significantly reduced (p < 0.05) the grass density in 2017 and BRR significantly affected (p < 0.05) the legume density in May 2017 and May 2018, respectively. These results indicate that the application of GlY and HAL resulted in the reduction of grass density. Furthermore, none of the applied chemicals negatively influenced the legume density.
随着世界人口以惊人的速度增长,迫切需要提高粮食安全。本研究旨在评估库贝德拉纳耕地在不同除草剂处理下的牧草干物质产量和植株密度。研究采用了八种处理方法,包括七种除草剂处理方法和一种对照方法。七种豆科植物的种子混合物被播撒在 24 块 3 m × 5 m 大小的地块中。除草剂处理包括 Bendioxide (BEN)、草甘膦 (GLY)、Haloxyfop-R methyl (HAL)、Haloxyfop-R methyl 和 Bendioxide (HBE)、百草枯 (PAR)、Bendioxide (BRR) 和百草枯 (PRR),分别在三个小区施用。在每个小区随机分布的 5 个 0.25 平方米的四分格中测定了干物质产量和植物密度。结果表明,与其他处理相比,GLY 对 DM 产量的影响显著(p < 0.05)。BRR 和 HBE 都明显降低了 DM 产量(p < 0.05)。GLY和HBE分别在2017年和2018年5月显著降低了草地密度(p < 0.05),BRR则显著影响了豆科植物密度(p < 0.05)。这些结果表明,施用 GlY 和 HAL 导致草密度降低。此外,施用的化学品均未对豆科植物密度产生负面影响。
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引用次数: 0
LeafArea Package: A Tool for Estimating Leaf Area in Andean Fruit Species 叶面积软件包:安第斯水果物种叶面积估算工具
Q4 Agricultural and Biological Sciences Pub Date : 2024-01-29 DOI: 10.3390/ijpb15010009
P. A. Velasquez-Vasconez, Danita Andrade Díaz
The LeafArea package is an innovative tool for estimating leaf area in six Andean fruit species, utilizing leaf length and width along with species type for accurate predictions. This research highlights the package’s integration of advanced machine learning algorithms, including GLM, GLMM, Random Forest, and XGBoost, which excels in predictive accuracy. XGBoost’s superior performance is evident in its low prediction errors and high R2 value, showcasing the effectiveness of machine learning in leaf area estimation. The LeafArea package, thus, offers significant contributions to the study of plant growth dynamics, providing researchers with a robust and precise tool for informed decision making in resource allocation and crop management.
LeafArea 软件包是估算安第斯六种水果叶面积的创新工具,它利用叶片长度和宽度以及物种类型进行准确预测。这项研究强调了该软件包集成了先进的机器学习算法,包括 GLM、GLMM、随机森林和 XGBoost,在预测准确性方面表现出色。XGBoost 的优越性能体现在预测误差小、R2 值高,展示了机器学习在叶面积估算中的有效性。因此,LeafArea 软件包为植物生长动态研究做出了重大贡献,为研究人员在资源分配和作物管理方面做出明智决策提供了强大而精确的工具。
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引用次数: 0
The Response of Botrytis cinerea to Fire in a Coast Redwood Forest 海岸红杉林中的灰葡萄孢菌对火灾的反应
Q4 Agricultural and Biological Sciences Pub Date : 2024-01-24 DOI: 10.3390/ijpb15010008
Damiana S. Rojas, G. Gilbert
Coast redwoods (Sequoia sempervirens) are long-lived trees that create deep shade and litter layers, and have limited recruitment from seedlings. Botrytis cinerea is an airborne fungal pathogen that attacks redwood seedlings. B. cinerea lives as a saprotroph in dead plant matter or as a necrotroph in live tissue. In the coast redwood forest, accumulated leaf litter may provide inoculum for subsequent infections, limiting redwood seedling recruitment. Here, we examine the response of B. cinerea to fire in the coast redwood forest. We measured the abundance of airborne B. cinerea spores in paired burned and unburned plots using a selective and diagnostic medium. In a greenhouse experiment, we grew seedlings in four different treatments: (1) burned soil with no leaf litter, (2) unburned soil with no leaf litter, (3) burned soil with leaf litter collected from the burn plot, (4) unburned soil with leaf litter collected from the unburned plot. Spore trapping showed no difference in the abundance of airborne spores in the paired plots. The seedling experiment showed that disease was greatest and survival lowest when grown in burned soil; leaf litter collected from burned plots reduced survival while leaf litter from not-burned plots increased survival. These results indicate that fire did not affect airborne B. cinerea and post-fire conditions did not provide favorable growth conditions for coast redwood seedlings.
海岸红杉(Sequoia sempervirens)是一种寿命很长的树木,它能形成很深的树荫和枯落物层,而且从幼苗开始生长的数量有限。Botrytis cinerea 是一种空气传播的真菌病原体,会侵袭红杉幼苗。B. cinerea 以嗜渍菌的形式生活在植物死物中,或以坏死菌的形式生活在活体组织中。在海岸红杉林中,累积的落叶可能会为后续感染提供接种体,从而限制红杉幼苗的生长。在这里,我们研究了 B. cinerea 对海岸红杉林火灾的反应。我们使用一种选择性诊断培养基测量了烧毁地块和未烧毁地块中空气传播的 B. cinerea 孢子数量。在温室实验中,我们在四种不同的处理中培育幼苗:(1)无落叶的烧毁土壤;(2)无落叶的未烧毁土壤;(3)从烧毁地块收集落叶的烧毁土壤;(4)从未烧毁地块收集落叶的未烧毁土壤。孢子捕获显示,配对地块中空气传播的孢子数量没有差异。幼苗实验表明,在烧毁的土壤中生长的幼苗发病率最高,存活率最低;从烧毁的地块收集的落叶会降低存活率,而从未曾烧毁的地块收集的落叶会提高存活率。这些结果表明,火灾并没有影响空气传播的 B. cinerea,火灾后的条件也没有为海岸红杉幼苗提供有利的生长条件。
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引用次数: 0
Multiple Foliar Fungal Disease Management in Tomatoes: A Comprehensive Approach 番茄多种叶面真菌病害防治:综合方法
Q4 Agricultural and Biological Sciences Pub Date : 2024-01-23 DOI: 10.3390/ijpb15010007
Dilip R. Panthee, Anju Pandey, Rajan Paudel
Foliar diseases are the significant production constraints in tomatoes. Among them, foliar fungal diseases in tomatoes, such as early blight (Alternaria linaria), Septoria leaf spot (Septoria lycopersici), and late blight (Phytophthora infestans), which is oomycetes, have higher economic significance. This paper will discuss the etiology, host range, distribution, symptoms, and disease cycle to help us understand the biology, followed by management approaches emphasizing the resistance breeding approach for these diseases. We provide an analytical review of crop improvement efforts, including conventional and molecular methods for improving these diseases’ resistance. We discuss the importance of modern breeding tools, including genomics, genetic transformation, and genome editing, to improve the resistance to these diseases in the future.
叶面病害是制约番茄生产的重要因素。其中,番茄叶面真菌病害,如早疫病(Alternaria linaria)、番茄叶斑病(Septoria lycopersici)和晚疫病(Phytophthora infestans)(卵菌),具有较高的经济意义。本文将讨论这些病害的病原学、寄主范围、分布、症状和发病周期,以帮助我们了解其生物学特性,然后介绍管理方法,强调抗性育种方法。我们分析回顾了作物改良工作,包括提高这些病害抗性的常规和分子方法。我们讨论了现代育种工具的重要性,包括基因组学、遗传转化和基因组编辑,以提高未来对这些病害的抗性。
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引用次数: 0
Experimental Botany: Anatomical and Morphological Approaches for Biotechnology and Nature Protection 实验植物学:用于生物技术和自然保护的解剖学和形态学方法
Q4 Agricultural and Biological Sciences Pub Date : 2024-01-23 DOI: 10.3390/ijpb15010006
Ekaterina N Baranova
As photosynthetic systems, plants are fundamental elements of the Earth’s biosphere, playing key roles in providing energy and resources [...]
作为光合作用系统,植物是地球生物圈的基本要素,在提供能源和资源方面发挥着关键作用 [...]
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引用次数: 0
Propagation of Saffron (Crocus sativus L.) Using Cross-Cuttings under a Controlled Environment 在可控环境下利用交叉插条繁殖藏红花(Crocus sativus L.)
Q4 Agricultural and Biological Sciences Pub Date : 2024-01-20 DOI: 10.3390/ijpb15010005
Soumaya El Merzougui, I. Boudadi, Khadija Lachguer, David G. Beleski, K. Lagram, Mohamed Lachheb, Mohamed Ben El Caid, Vania M. Pereira, P. Nongdam, M. Serghini, W. Vendrame
Saffron (Crocus sativus L.) is a valuable geophyte plant and one of the most expensive spices in the world. Recently, the demand for saffron spice has increased in worldwide markets owing to its enormous application and value. However, the production of saffron is limited by the vegetative propagation technique and the limited number of high-quality corms planted. Furthermore, climatic changes, notably increasing temperatures, negatively influence saffron multiplication and growth. Thus, it is important to develop alternative cultivation and propagation techniques for saffron under a controlled environment, which could ensure an increase in saffron yield and avoid the negative impact of climatic changes. The present study aimed to develop an alternative method for vegetative propagation of Crocus sativus under controlled conditions. The effect of different cross-cuttings, including basal cuttings (BCs) and top-to-bottom cuttings (CTBs), was evaluated on shoot, leaf, flower, and daughter corm production. All the growth parameters examined were influenced by the cutting treatment applied. The results showed that the highest number of shoots formed was obtained by BCs and CTBs, with an average of 6.68 and 5.47 shoots per corm, respectively, compared to the control with an average of 2.70 shoots per corm. The cutting treatment positively affected the formation of daughter corms in which, the high mean number of corms recorded was obtained by the BC treatment. Meanwhile, the lower size of the daughter corms was obtained after the cross-cutting treatment. This is the first report that provides an alternative propagation for saffron using a controlled environment, which could help to improve the production of saffron.
藏红花(Crocus sativus L.)是一种珍贵的地衣植物,也是世界上最昂贵的香料之一。近年来,由于藏红花的巨大用途和价值,全球市场对藏红花香料的需求不断增加。然而,藏红花的生产受到无性繁殖技术和优质球茎种植数量有限的限制。此外,气候变化,特别是气温的升高,也对藏红花的繁殖和生长产生了不利影响。因此,在可控环境下开发藏红花的替代栽培和繁殖技术非常重要,这样既能确保藏红花产量增加,又能避免气候变化的负面影响。本研究旨在开发一种可控条件下藏红花无性繁殖的替代方法。研究评估了不同交叉扦插方法(包括基部扦插(BC)和从上到下扦插(CTB))对芽、叶、花和子实体产量的影响。所有考察的生长参数都受到扦插处理的影响。结果表明,BCs 和 CTBs 形成的嫩枝数量最多,平均每个球茎分别有 6.68 个和 5.47 个嫩枝,而对照组平均每个球茎只有 2.70 个嫩枝。切割处理对子茎的形成有积极影响,其中 BC 处理的子茎平均数量最高。同时,横切处理后子茎的尺寸较小。这是首次报道利用受控环境繁殖藏红花的替代方法,有助于提高藏红花的产量。
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引用次数: 0
The tgd5 Mutation Affects Plastid Structure and Causes Giant Lipid Droplet Formation in Trichomes of Arabidopsis tgd5 突变影响拟南芥的质体结构并导致毛状体中巨型脂滴的形成
Q4 Agricultural and Biological Sciences Pub Date : 2024-01-09 DOI: 10.3390/ijpb15010004
Kanae Matsuoka, Hiroko Kubotera, Rina Miyazaki, Shota Moriyama, M. Fujiwara, Ryuuichi D. Itoh
Trichomes, epidermal protrusions in terrestrial plants, play diverse roles in plant defense, metabolism, and development. Arabidopsis thaliana, a model plant with single-celled and non-glandular trichomes, is a valuable system for studying cell differentiation in plants. However, organelle biology in Arabidopsis trichomes is relatively underexplored. Using light and transmission electron microscopy, we investigated the phenotypes of intracellular structures in Arabidopsis trichomes caused by tgd5 mutations, which are known to disrupt lipid transfer from the endoplasmic reticulum to plastids and have a large impact on chloroplast morphology in pavement and guard cells. Significant phenotypic changes in the plastid structure were observed in tgd5 trichome cells, including the absence of plastoglobuli, the emergence of clusters of electron-dense particles in the stroma, and the possibly cup-shaped morphology of plastids. Additionally, the tgd5 mutations triggered the formation of giant, up to 15 µm in diameter, neutral lipid-containing droplets in the trichome cells, as revealed using histochemical staining with lipophilic dyes. These lipid droplets were substantially larger and more frequent in trichome cells than in other types of cells in tgd5. These findings highlight the role of TGD5 in maintaining plastid structure and implicate the unique activity of lipid metabolism in Arabidopsis trichomes.
毛状体是陆生植物的表皮突起,在植物防御、新陈代谢和发育过程中发挥着多种作用。拟南芥是一种具有单细胞和非腺体毛状体的模式植物,是研究植物细胞分化的宝贵系统。然而,拟南芥毛状体中的细胞器生物学研究相对不足。我们利用光显微镜和透射电子显微镜研究了拟南芥毛状体中由ttgd5突变引起的细胞内结构的表型,众所周知,ttgd5突变会破坏从内质网到质体的脂质转移,并对铺面细胞和保卫细胞中的叶绿体形态产生巨大影响。在 tgd5 毛状体细胞中观察到质体结构发生了显著的表型变化,包括质体球的缺失、基质中电子致密颗粒簇的出现以及质体可能呈杯状的形态。此外,利用亲脂性染料进行组织化学染色显示,tgd5突变会在毛状体细胞中形成直径达15微米的巨型中性含脂液滴。与其他类型的细胞相比,tgd5 的毛状体细胞中的这些脂滴更大更频繁地出现。这些发现凸显了 TGD5 在维持质体结构中的作用,并表明拟南芥毛状体中脂质代谢具有独特的活性。
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引用次数: 0
Germination and Vegetative Propagation of the Wild Species Cuphea pulchra Moric. (Lythraceae), a Potential Ornamental Crop 野生物种 Cuphea pulchra Moric.(一种潜在的观赏作物
Q4 Agricultural and Biological Sciences Pub Date : 2023-12-29 DOI: 10.3390/ijpb15010003
Ana Luísa Corsino, D. Alves-da-Silva, Luis Alberto M. Palhares-Melo, T. B. Cavalcanti
Cuphea pulchra Moric. is a species native to the Cerrado and Caatinga biomes that grows in environments with high temperatures and low rainfall and can be adapted as an ornamental plant for pots. Tests were carried out on C. pulchra seeds, as well as the cultivation of plants from both seeds and cuttings in a greenhouse. Seeds at different stages of maturity (green, almost ripe, and mature) were placed on agar and paper for germination tests. The cultivated plants were pruned as necessary. Two cutting tests were carried out according to the age of the donor plant. The flowering period was monitored. Germination was successful with the almost ripe seeds. Drastic pruning was able to produce compact plants in pots. Cutting tests had greater sprouting with younger donor plants. Cuphea pulchra stood out in terms of the length of the flowering period, which lasted up to ten months. Greenhouse cultivation produced viable plants for the ornamental plant market.
Cuphea pulchra Moric.是一种原产于塞拉多(Cerrado)和卡廷加(Caatinga)生物群落的物种,生长在高温少雨的环境中,可作为盆栽观赏植物。我们对 C. pulchra 的种子进行了试验,并在温室中对种子和扦插植物进行了培育。将不同成熟阶段(绿色、近成熟和成熟)的种子放在琼脂和纸上进行发芽试验。必要时对培育的植株进行修剪。根据供体植株的年龄进行两次剪枝试验。对花期进行了监测。几乎成熟的种子发芽成功。大幅修剪能培育出株型紧凑的盆栽植物。扦插试验中,较年轻的供体植株萌发率更高。Cuphea pulchra 在花期方面表现突出,花期长达 10 个月。温室栽培为观赏植物市场提供了有生命力的植株。
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引用次数: 0
Prospection of Nematotoxic Aqueous Seeds Extracts Derived from the Preserved Arachis (Fabaceae) Germplasm Bank 从保存的天南星(豆科)种质库中提取线虫毒性种子水提取物的研究
Q4 Agricultural and Biological Sciences Pub Date : 2023-12-19 DOI: 10.3390/ijpb15010001
Bruna Nascimento, Cristiane Brauna, Paula Ferreira, Luis Melo, Paulo Ferreira, Thales Rocha
Plant-parasitic nematodes (PPN) are the most damaging plant pathogens all over the world. Root-knot nematodes (RKNs), considered the most important phytonematodes globally, cause significant agricultural losses. Despite the availability of various strategies to manage these pathogenic agents, excessive use of nematicides poses a threat to human health and the environment. Compounds derived from plant sources are proposed as an alternative to new biocides, potentially offering advantages over synthetic components. Several species within the Fabaceae family, including those within the Arachis genus, have demonstrated potential as sources of nematotoxic compounds. As part of a research program aimed at exploring bioactive compounds and valorizing germplasm banks, this study evaluated the nematicidal and nematostatic effects of aqueous crude extracts (ACEs) obtained from nine Arachis species sourced from the Embrapa Active Germplasm Bank against M. incognita’s second-stage juveniles (J2). The results indicate that Arachis stenosperma (ACE1) has promising nematocidal potential, with effectiveness exceeding 95% on dead nematodes for doses above 0.5 mg/mL. ACE1 has also demonstrated thermostability and lower harmful effects on bovine cells. This research provides a fresh outlook on the promising use of preserved germplasms to enhance Germplasm Storage Bank’s value, given the underexplored potential of these biological assets.
植物寄生线虫(PPN)是全世界危害最大的植物病原体。根结线虫(RKNs)被认为是全球最重要的植物线虫,造成了巨大的农业损失。尽管有各种策略来管理这些病原体,但过度使用杀线虫剂对人类健康和环境构成了威胁。从植物中提取的化合物被建议作为新杀虫剂的替代品,可能比合成成分更具优势。豆科植物中的一些物种,包括阿拉伯豆属的物种,已被证明具有作为线虫毒性化合物来源的潜力。作为旨在探索生物活性化合物和提高种质库价值的研究计划的一部分,本研究评估了从 Embrapa 公司活性种质库中获得的九种 Arachis 品种的水性粗提取物(ACEs)对 M. incognita 第二阶段幼虫(J2)的杀线虫和线虫抑制作用。结果表明,Arachis stenosperma(ACE1)具有很好的杀线虫潜力,在剂量超过 0.5 毫克/毫升时,对死亡线虫的有效率超过 95%。ACE1 还具有热稳定性,对牛细胞的有害影响较小。鉴于保存的种质的潜力尚未得到充分开发,这项研究为利用保存的种质来提高种质贮藏库的价值提供了新的前景。
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引用次数: 0
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International Journal of Plant Biology
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