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Electron transport in DNA sequencing connected to silicene electrodes: design of electronic devices 连接到硅电极的DNA测序中的电子传递:电子装置的设计
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.81549
In this article, electron transport has been studied for a system consisting of a double-stranded DNA molecule with a telomeric sequence attached to two semi-finite electrodes of silicic nanoribbons. This study has been investigated using the tight-binding model and Green's function approach. By placing the DNA molecule in the middle of two silicon nanorod electrodes, we can see the electron passing channels in the system, and also the type of organic base connected to the electrodes showed a significant effect on the electron transport of the system. Calculations show that telomeric sequences such as TAGGGT, TTAGGG, and GTTAGG have the highest electrical conductivity compared to other sequences. We found that by controlling the gate voltage in the system, It is possible to control the current or load delivery. Also, by increasing the number of organic base pairs in the system, we saw an increase in current, and by controlling the number of organic base pairs, the transport characteristics can be controlled. This ability to control has many uses and a significant role in the manufacture of electronic components.
本文研究了由端粒序列连接到硅纳米带的两个半有限电极的双链DNA分子组成的系统的电子传递。本研究采用紧密结合模型和格林函数方法进行研究。通过将DNA分子置于两个硅纳米棒电极的中间,我们可以看到系统中的电子通过通道,并且连接到电极上的有机碱的类型对系统的电子传递也有显著的影响。计算表明,与其他序列相比,TAGGGT、TTAGGG和GTTAGG等端粒序列具有最高的电导率。我们发现,通过控制系统中的栅极电压,可以控制电流或负载的传递。同时,通过增加系统中有机碱基对的数量,我们看到电流的增加,通过控制有机碱基对的数量,可以控制传输特性。这种控制能力在电子元件的制造中有许多用途和重要作用。
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引用次数: 0
Study of thermal diffusivity coefficient of ultrathin metal layers using thermal lens spectroscopy 用热透镜光谱法研究超薄金属层的热扩散系数
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.41673
In spite of the incredible evolutions of advanced material characterization methods, this field of research faces different technical and scientific challenges. Thermal lens spectroscopy is known as a sensitive and nondestructive optical based technique to characterize the opto-thermal properties of materials and also to diagnose the impurities in the solutions. In this research, by engaging thermal lens spectroscopy, we investigate the thermal diffusivity coefficient of ultrathin silver layers, prepared by magnetron sputtering. For this propose, the Shen theoretical model is fitted to the obtained empirical signal and subsequently, the thermal diffusivity coefficient will be extracted. The results clearly show that, in the investigated interval thickness (<15nm), the thermal diffusivity coefficient increases by increasing the thickness. Furthermore, our findings reveal that in the very fine thickness region, the thermal diffusivity coefficient shows a fair dependence on the thickness of the silver layers. This might be explained by 2D behavior of the thermal diffusivity for ultrathin metal nanolayers.
尽管先进的材料表征方法取得了令人难以置信的发展,但这一研究领域面临着不同的技术和科学挑战。热透镜光谱学是一种灵敏、无损的光学技术,用于表征材料的光热特性和诊断溶液中的杂质。在这项研究中,我们利用热透镜光谱研究了磁控溅射制备的超薄银层的热扩散系数。为此,将沈理论模型拟合到获得的经验信号中,然后提取热扩散系数。结果清楚地表明,在所研究的层厚(<15nm)内,随着层厚的增加,热扩散系数增大。此外,我们的研究结果表明,在非常细的厚度区域,热扩散系数对银层的厚度有一定的依赖性。这可以用超薄金属纳米层的二维热扩散率行为来解释。
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引用次数: 0
The effects of random reset on the dynamics of a non-Markovian random walk 随机重置对非马尔可夫随机漫步动力学的影响
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.21612
Resetting in stochastic systems is defined in different ways. In this research, a 1D non-Markovian random walk is considered. In this process, the reset changes the dynamics in a way where the random walker, after losing its memory, goes back to a fixed point in space and starts again. In this study we investigate time evolution and also the long-time limit of displacement moments in the presence of resetting. Our calculations in the long-time limit show that the probability distribution function for displacement reaches a steady-state. On the other hand, this distribution never gets to a Gaussian form for any values of the resetting rate. We will show that, in contrast to the case where the process does not undergo resetting, the moments accumulate to finite values. This is confirmed by doing Monte Carlo simulations.
随机系统中的重置有不同的定义。本研究考虑一维非马尔可夫随机漫步。在这个过程中,重置会改变动态,使随机漫步者在失去记忆后回到空间中的固定点并重新开始。在这项研究中,我们研究了时间的演变和位移矩的长期限制在重置的存在。在长时间极限下的计算表明,位移的概率分布函数达到稳态。另一方面,对于重置率的任何值,这个分布都不会达到高斯形式。我们将证明,与过程不经历重置的情况相反,力矩累积到有限值。通过蒙特卡罗模拟证实了这一点。
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引用次数: 0
Investigating the damage to the genetic material of the cell induced by protons and carbon ions with the MCDS code compared to the results of the Geant4-DNA Monte Carlo code 用MCDS编码与genant4 - dna蒙特卡罗编码的结果进行比较,研究质子和碳离子对细胞遗传物质的损伤
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.01584
Due to physical and chemical interactions with the cell DNA, ionizing radiations induce early and late damage to the genetic material. This type of damage, which is mainly caused by single-stranded and double-stranded breaks in DNA, and if not repaired by the cell, can lead to genetic mutations or cell death. In this research, the DNA damage of living cells, induced by protons and carbon ions, which are of great importance in radiation therapy studies, has been investigated with the MCDS code. In order to check the accuracy of the MCDS code results in this research, the probability of each type of damage and the yields have been calculated and compared with the results of previous works with Geant4-DNA. The results of this research, especially double-strand breaks, are very close to the results calculated with the Geant4-DNA code. There are also differences in the results due to the difference in the cross-sections of the two codes, especially in ionization and excitation interactions, as well as the reaction rates of chemical radicals. The results of this research regarding the efficiency of double-strand breaks can be very useful in the planning of treatment with protons and carbon ions.
由于电离辐射与细胞DNA的物理和化学相互作用,导致遗传物质的早期和晚期损伤。这种类型的损伤主要是由DNA单链和双链断裂引起的,如果不被细胞修复,可能导致基因突变或细胞死亡。本研究利用MCDS编码研究了质子和碳离子对活细胞的DNA损伤,这是放射治疗研究的重要内容。为了验证本研究中MCDS代码结果的准确性,我们计算了各种类型损伤的概率和屈服,并与以往的工作结果进行了比较。本研究的结果,特别是双链断裂,与用Geant4-DNA编码计算的结果非常接近。由于两种代码的截面不同,特别是在电离和激发相互作用方面,以及化学自由基的反应速率方面,结果也存在差异。这项关于双链断裂效率的研究结果对质子和碳离子处理的规划非常有用。
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引用次数: 0
Investigating the giant magnetoresistance in a two-dimensional square network including two materials with a diagonal boundary 研究具有对角边界的两种材料的二维方形网络中的巨磁电阻
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.71531
Large magnetic resistance has been widely considered due to its many applications in various fields, including the manufacture of magnetic sensors. An important case of this type of resistance is the linear magnetoresistance caused by the inhomogeneity of charge distribution. The magnetoresistance of heterogeneous conductors is simulated by the two-dimensional resistance network model. In the network model, the resistance unit of a homogeneous circular disk with four current terminals and the potential difference between the terminals is considered, and the currents and potential differences are connected to each other by means of the impedance matrix, and the magnetic field is perpendicular to the lattice. In this work, we study and investigate the changes in magnetoresistance for a network including two subsystems with different resistances with a diagonal arrangement. The results show that the changes in the magnetic resistance of the heterogeneous system depend on the resistance ratio of the two materials as well as the location of the boundary between them. In addition, it was observed that for large values ​​of the resistance ratio or high inhomogeneity, there is the possibility of the existence of a peak of resistance variation.
由于大磁阻在各个领域的广泛应用,包括磁传感器的制造,它已经得到了广泛的考虑。这类电阻的一个重要例子是由电荷分布的不均匀性引起的线性磁电阻。采用二维电阻网络模型模拟了非均质导体的磁阻。在网络模型中,考虑具有四个电流端子和端子间电位差的均匀圆盘的电阻单元,通过阻抗矩阵将电流和电位差相互连接,磁场垂直于晶格。在这项工作中,我们研究和研究了一个包含两个不同电阻的对角排列子系统的网络的磁电阻变化。结果表明,非均相体系的磁阻变化取决于两种材料的电阻比以及两种材料之间的边界位置。此外,观察到电阻比值较大或非均匀性较高时,有可能存在电阻变化峰。
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引用次数: 0
Study of isotopic yield and half-life of spontaneous fission for two (_ 104^266)Rf and (_104^268)Rf superheavy isotopes 两种(_104^ 266)Rf和(_104^268)Rf超重同位素的同位素产率和自发裂变半衰期研究
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.01588
Isotopic yields and half-lives for (_ 104^266)Rf and (_104^268)Rfisotopes of the superheavy nucleus Rutherfordium are calculated and compared with the experimental data. For each fragmentation, the probability of tunneling through the fission barrier and the fission decay constant are obtained using the WKB approximation. Then, by summation over all partial fission constants, total fission constant and half-lives of two isotopes are obtained. In order to calculate the fission barrier, proximity nuclear and Coulomb potentials are considered (because of even-even isotopes, their ground state spin is zero, so centrifugal potential becomes zero.). The fission barrier as a function of fragment mass number is plotted for two isotopes. Usually, spontaneous fission occurs in superheavy nuclei in such a way that the excitation energy of the parent nucleus is low and therefore the number of neutrons emitted along with the fission is small and can be ignored. Therefore, in this method, which is known as cold spontaneous fission, instantaneous emission of neutrons along with fission is ignored. Isotopic yields of (_ 104^266)Rf and (_104^268)Rf for all possible splitting indicated that the production of two fragments (_ 52^134)Te and (_52^132)Te have the highest partial yields for fission of (_ 104^266)Rf and (_104^268)Rf isotopes, respectively. The existence of a small difference between the calculated and measured half-lives confirms the relative success of our method. .
计算了超重核卢瑟福的(_104^ 266)Rf和(_104^268)Rf同位素的同位素产率和半衰期,并与实验数据进行了比较。利用WKB近似,得到了每一次裂变势垒隧穿的概率和裂变衰变常数。然后,通过对所有部分裂变常数求和,得到两种同位素的总裂变常数和半衰期。为了计算裂变势垒,考虑了接近核和库仑势(因为偶偶同位素,它们的基态自旋为零,所以离心势变为零)。绘制了两种同位素的裂变势垒随碎片质量数的函数图。通常,自发裂变发生在超重核中,母核的激发能很低,因此随裂变而发射的中子数很小,可以忽略。因此,在这种被称为冷自发裂变的方法中,忽略了随裂变而产生的中子的瞬时发射。(_104^ 266)Rf和(_104^268)Rf的同位素产率表明,(_104^ 266)Rf和(_104^268)Rf同位素裂变产生的两个碎片(_52^ 134)Te和(_52^132)Te的部分产率分别最高。计算的半衰期和测量的半衰期之间存在着很小的差异,这证实了我们的方法是相对成功的。
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引用次数: 0
Annealing temperature effect on optical properties of cadmium telluride thin films 退火温度对碲化镉薄膜光学性能的影响
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.81554
Cadmium telluride nanoparticles (CdTe NPs) were deposited by the thermal evaporation method on glass substrates at a temperature of 373 K and a vacuum pressure of 2.7 mPa, and thin films with the thickness of 100 nm were fabricated. The prepared films were subjected to ultraviolet-visible (UV-Vis) spectroscopy to study the optical properties of thin films. To investigate the effect of annealing temperature on the optical properties of cadmium telluride thin films, these films were annealed at temperatures (323-373) K. The light absorption spectra of films before and after annealing were recorded using UV-Vis spectroscopy at a wavelength range of 600-1600 nm shows that the value of light absorption by films increased with the increased annealing temperature. The optical energy bandgap of the grown films has a decrement process from 1.519 eV after annealing. The results of the Tauc plot show the decrease in energy bandgap with annealing. Extinction and refractive indices increase with increment of photon energy and annealing temperature. The relative density and electronic polarizability of grown films increase after annealing. Other optical parameters obtained in this work, including the real and imaginary parts of the dielectric constant, increase, while the surface and volume energy loss functions decrease with increase of the annealing temperature. The results of this work indicate that the deposited cadmium telluride thin films annealed at 373 K have better optical properties for photoelectronic applications.
采用热蒸发法制备了碲化镉纳米颗粒(CdTe NPs),温度为373 K,真空压力为2.7 mPa,制备了厚度为100 nm的薄膜。对制备的薄膜进行了紫外可见光谱(UV-Vis)研究。为了研究退火温度对碲化镉薄膜光学性能的影响,将这些薄膜在323 ~ 373 k温度下进行退火。利用紫外可见光谱法在600 ~ 1600 nm波长范围内记录了薄膜退火前后的光吸收光谱,结果表明,薄膜的光吸收值随着退火温度的升高而增加。经退火后,生长薄膜的光能带隙从1.519 eV减小。tac图的结果表明,退火后能隙减小。消光系数和折射率随光子能量和退火温度的增加而增大。退火后,生长膜的相对密度和电子极化率提高。随着退火温度的升高,得到的介电常数实部和虚部等其他光学参数增大,而表面和体积能量损失函数减小。结果表明,在373 K退火后沉积的碲化镉薄膜具有较好的光学性能,可用于光电子应用。
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引用次数: 0
Theoretical study of helium atom single ionization by bare carbon ions impact 裸碳离子撞击氦原子单电离的理论研究
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.21647
In this work, the single ionization of helium atoms from the ground and the first excited state by bare carbon ions () impact at the incident energy of 100 MeV has been studied. The post form of CDW-4B formalism is used in the calculations. The correlated Silverman wave function as the ground state of the helium atom has been used to consider the effects of static electron correlation. The results, as the fully differential cross section in the azimuthal plane for different angles and the ejected electron energy 6.5 eV and momentum transfer 0.75 a.u, are compared with experimental and three-body formalism results from theory. Also, the variations of the fully differential cross section in the scattering plane for the various ejected electron energies and momentum transfers have been studied.
本文研究了氦原子在入射能量为100 MeV的情况下,受到裸碳离子()撞击而产生的单次电离和第一激发态。计算采用CDW-4B形式的post形式。用相关的Silverman波函数作为氦原子的基态来考虑静态电子相关的影响。在不同角度的方位面全微分截面、射出电子能量6.5 eV和动量传递0.75 a.u的情况下,将结果与实验结果和理论的三体形式计算结果进行了比较。此外,还研究了各种电子抛射的能量和动量转移在散射面上的全微分截面的变化。
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引用次数: 0
verification of proton range in proton therapy using conversion of PGT spectrum to prompt γ-ray emission profile 利用PGT光谱转换提示γ射线发射剖面验证质子治疗中的质子范围
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.71532
One of the on-line range verification techniques in proton therapy is time -of-flight (TOF) measurement for prompt gamma. In this technique, the prompt gamma timing spectra is measured using the time difference between passage of the particle bunch through the target entrance of the beam and the arrival time of the corresponding prompt γ-ray at the detector.In this study, homogeneous PMMA phantom and PMMA phantoms with a slice of bone or air cavity were simulated in GEANT4 simulation. These targets were irradiated with a proton pencil beam with an initial energy of 150 MeV, and the resulting PGT spectra was recorded by scintillation detectors.Then, a code was programmed in MATLAB software to analytically solve the kinematics of proton movement in the phantom, and the PGT spectrum obtained from GEANT4 was given as an input to this software code and the prompt gamma-ray emission profiles was obtained in the phantom. In this study, the effect of the type and position of the heterogeneous slice on the PGT spectrum and the prompt gamma-ray emission profiles resulting from the PGT transformation was investigated. From the comparison of the prompt gamma-ray emission profile resulting from PGT spectra conversion, with the energy deposition spectra resulting from GEANT4 simulation, it was observed that the range shift and the shift of energy deposition location resulting from an inhomogeneity in PMMA have a significant relationship compared to the reference phantom.The presence of an inhomogeneous slice of bone and air cavity with a thickness of 10 mm shifts the range of the proton compared to its range in the reference phantom by 4 mm and 9.6 mm, respectively, and the spectra of energy deposition for these states are respectively 4.8 mm and 9.9 mm shifted relative to the energy deposition spectra of the reference phantom. Therefore, the PGT spectra reflects the proton transit time in the target material and provides the possibility of determining the prompt gamma-ray emission profiles and the possibility of confirming the delivery of the dose to the patient's body.
质子治疗的在线距离验证技术之一是飞行时间(TOF)测量提示伽马。在这种技术中,利用粒子束通过光束的目标入口和相应的提示γ射线到达探测器的时间之间的时间差来测量提示伽马时序谱。本研究在GEANT4仿真中分别模拟均匀PMMA幻像和带骨片或空腔的PMMA幻像。用初始能量为150 MeV的质子束照射这些目标,并通过闪烁探测器记录了所产生的PGT光谱。然后,在MATLAB软件中编写代码,解析求解质子在幻体中的运动运动学,并将GEANT4获得的PGT谱作为该软件代码的输入,得到幻体中的提示伽马射线发射曲线。在这项研究中,研究了非均质薄片的类型和位置对PGT光谱和由PGT变换产生的提示伽马射线发射剖面的影响。通过将PGT光谱转换得到的提示伽马射线发射剖面与GEANT4模拟得到的能量沉积光谱进行比较,发现PMMA中不均匀性导致的距离偏移和能量沉积位置偏移与参考模体有显著的关系。厚度为10 mm的非均匀骨片和空腔的存在使质子的范围相对于参考模体的范围分别偏移了4 mm和9.6 mm,这两种状态的能量沉积谱相对于参考模体的能量沉积谱分别偏移了4.8 mm和9.9 mm。因此,PGT光谱反映了质子在目标材料中的传递时间,并提供了确定提示伽马射线发射谱的可能性,并提供了确认剂量递送到患者体内的可能性。
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引用次数: 0
The bulk flow in uLCDM and XCDMand the Hubble constant and sigma8 tensions uLCDM和xcdm中的体积流、哈勃常数和sigma8张力
Q4 Physics and Astronomy Pub Date : 2023-06-01 DOI: 10.47176/ijpr.23.1.31667
The standard model of cosmology,, has been successful in describing many observations. With the improvement of the number and the accuracy of observations, some inconsistencies among key cosmological parameters of the model have emerged. Many alternative models are proposed to alleviate these tensions. On the other hand, some observations of peculiar velocity show higher values than expected in a universe which may contradict the cosmological principle. In this work, we used linear perturbation theory to measure bulk flow and parameter in two alternative cosmological models and XCDM. We compared measured bulk flows with the predictions and some observations. We did a analysis to see which model is preferred by data. We find that model predicts higher bulk flows and is more consistent with observational data but does not reduce tension. Bulk flows measured in the XCDM model are lower compared to . However, this model can reconcile tension.
宇宙学的标准模型已经成功地描述了许多观测结果。随着观测数量和精度的提高,模型的关键宇宙学参数之间出现了一些不一致。提出了许多替代模型来缓解这些紧张关系。另一方面,在一个可能与宇宙学原理相矛盾的宇宙中,一些特殊速度的观测显示出比预期更高的值。在这项工作中,我们使用线性微扰理论测量了两个备选宇宙学模型和XCDM的体积流量和参数。我们将测量的总体流量与预测和一些观察结果进行了比较。我们做了一个分析,看看哪种模型更受数据青睐。我们发现该模型预测了更高的体积流量,与观测数据更加一致,但没有降低张力。在XCDM模型中测量的总体流量比。然而,这种模式可以调和紧张关系。
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引用次数: 0
期刊
Iranian Journal of Physics Research
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