Peatlands are crucial components of the global carbon (C) cycle but have been extensively degraded by drainage. Rewetting is a common practice to restore drained peatlands, yet its effectiveness and impacts on belowground soil organic carbon (SOC) dynamics remain uncertain. To effectively monitor restoration outcomes, affordable, time-efficient, and informative tools are essential. Pyrolysis-gas chromatography/mass spectrometry (py-GC/MS) provides detailed soil organic matter (SOM) characterization, but its high cost, time-intensive nature, and technical complexity limit its routine use. In contrast, mid infrared (MIR) spectroscopy, combined with chemometrics, can offer a promising alternative. This study evaluated the potential of MIR spectroscopy for: (1) reproducing the relative contribution of chemical groups as derived from py-GC/MS, (2) estimating SOC decomposability, and (3) monitoring belowground changes when undrained peatlands are drained or drained peatlands are rewetted. Our results indicated that MIR spectroscopy can effectively estimate specific chemical groups, including benzenes (R2P = 0.89), carbohydrates (R2P = 0.85), N-containing compounds (R2P = 0.76), and n-alkenes (R2P = 0.74), with fair predictions for lignins (R2P = 0.68) and phenols (R2P = 0.64). SOC decomposability, expressed as basal respiration per SOC, was also reasonably estimated (R2CV = 0.74). MIR spectra significantly differed between undrained and drained fens (P < 0.05), whereas rewetted fens did not differ from either condition (Ps > 0.05). Partial least squares−discriminant analysis further identified the functional groups most responsive to hydrological changes. Overall, MIR spectroscopy represents a cost- and time-efficient tool for assessing SOM composition and carbon stability in fens, supporting data-driven peatland restoration.
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