Pub Date : 2015-03-14DOI: 10.1140/epjti/s40485-015-0015-9
N. Pavillon, N. Smith
{"title":"Implementation of simultaneous quantitative phase with Raman imaging","authors":"N. Pavillon, N. Smith","doi":"10.1140/epjti/s40485-015-0015-9","DOIUrl":"https://doi.org/10.1140/epjti/s40485-015-0015-9","url":null,"abstract":"","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-015-0015-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"63972529","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-03-12DOI: 10.1140/epjti/s40485-014-0012-4
Ralph van Oorschot, H. H. Perez Garza, R. Derks, U. Staufer, M. Ghatkesar
{"title":"A microfluidic AFM cantilever based dispensing and aspiration platform","authors":"Ralph van Oorschot, H. H. Perez Garza, R. Derks, U. Staufer, M. Ghatkesar","doi":"10.1140/epjti/s40485-014-0012-4","DOIUrl":"https://doi.org/10.1140/epjti/s40485-014-0012-4","url":null,"abstract":"","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-03-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-014-0012-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"63972618","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-02-27DOI: 10.1140/epjti/s40485-015-0014-x
M. Hudl, P. Lazor, R. Mathieu, A. Gavriliuk, V. Struzhkin
{"title":"PPMS-based set-up for Raman and luminescence spectroscopy at high magnetic field, high pressure and low temperature","authors":"M. Hudl, P. Lazor, R. Mathieu, A. Gavriliuk, V. Struzhkin","doi":"10.1140/epjti/s40485-015-0014-x","DOIUrl":"https://doi.org/10.1140/epjti/s40485-015-0014-x","url":null,"abstract":"","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-015-0014-x","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"63972856","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-02-24DOI: 10.1140/epjti/s40485-015-0013-y
R. Wiese, H. Kersten, G. Wiese, R. Bartsch
{"title":"Energy influx measurements with an active thermal probe in plasma-technological processes","authors":"R. Wiese, H. Kersten, G. Wiese, R. Bartsch","doi":"10.1140/epjti/s40485-015-0013-y","DOIUrl":"https://doi.org/10.1140/epjti/s40485-015-0013-y","url":null,"abstract":"","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-02-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-015-0013-y","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"63972638","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-01-01Epub Date: 2015-07-28DOI: 10.1140/epjti/s40485-015-0020-z
Alexander von Zastrow, Jolijn Onvlee, David H Parker, Sebastiaan Y T van de Meerakker
A Stark decelerator produces beams of molecules with high quantum state purity, and small spatial, temporal and velocity spreads. These tamed molecular beams are ideally suited for high-resolution crossed beam scattering experiments. When velocity map imaging is used, the Stark decelerator allows the measurement of scattering images with unprecedented radial sharpness and angular resolution. Differential cross sections must be extracted from these high-resolution images with extreme care, however. Common image analysis techniques that are used throughout in crossed beam experiments can result in systematic errors, in particular in the determination of collision energy, and the allocation of scattering angles to observed peaks in the angular scattering distribution. Using a high-resolution data set on inelastic collisions of velocity-controlled NO radicals with Ne atoms, we describe the challenges met by the high resolution, and present methods to mitigate or overcome them. PACS Codes: 34.50.-s; 37.10.Mn.
{"title":"Analysis of velocity-mapped ion images from high-resolution crossed-beam scattering experiments: a tutorial review.","authors":"Alexander von Zastrow, Jolijn Onvlee, David H Parker, Sebastiaan Y T van de Meerakker","doi":"10.1140/epjti/s40485-015-0020-z","DOIUrl":"https://doi.org/10.1140/epjti/s40485-015-0020-z","url":null,"abstract":"<p><p>A Stark decelerator produces beams of molecules with high quantum state purity, and small spatial, temporal and velocity spreads. These tamed molecular beams are ideally suited for high-resolution crossed beam scattering experiments. When velocity map imaging is used, the Stark decelerator allows the measurement of scattering images with unprecedented radial sharpness and angular resolution. Differential cross sections must be extracted from these high-resolution images with extreme care, however. Common image analysis techniques that are used throughout in crossed beam experiments can result in systematic errors, in particular in the determination of collision energy, and the allocation of scattering angles to observed peaks in the angular scattering distribution. Using a high-resolution data set on inelastic collisions of velocity-controlled NO radicals with Ne atoms, we describe the challenges met by the high resolution, and present methods to mitigate or overcome them. <b>PACS Codes:</b> 34.50.-s; 37.10.Mn.</p>","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-015-0020-z","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33964354","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-01-01Epub Date: 2015-08-06DOI: 10.1140/epjti/s40485-015-0021-y
Sjoerd N Vogels, Zhi Gao, Sebastiaan Yt van de Meerakker
With the Stark deceleration technique, packets of molecules with a tunable velocity, a narrow velocity spread, and a high state purity can be produced. These tamed molecular beams find applications in high resolution spectroscopy, cold molecule trapping, and controlled scattering experiments. The quality and purity of the packets of molecules emerging from the decelerator critically depend on the specifications of the decelerator, but also on the characteristics of the molecular beam pulse with which the decelerator is loaded. We consider three frequently used molecular beam sources, and discuss their suitability for molecular beam deceleration experiments, in particular with the application in crossed beam scattering in mind. The performance of two valves in particular, the Nijmegen Pulsed Valve and the Jordan Valve, is illustrated by decelerating ND 3 molecules in a 2.6 meter-long Stark decelerator. We describe a protocol to characterize the valve, and to optimally load the pulse of molecules into the decelerator. We characterize the valves regarding opening time duration, optimal valve-to-skimmer distance, mean velocity, velocity spread, state purity, and relative intensity.
{"title":"Optimal beam sources for Stark decelerators in collision experiments: a tutorial review.","authors":"Sjoerd N Vogels, Zhi Gao, Sebastiaan Yt van de Meerakker","doi":"10.1140/epjti/s40485-015-0021-y","DOIUrl":"https://doi.org/10.1140/epjti/s40485-015-0021-y","url":null,"abstract":"<p><p>With the Stark deceleration technique, packets of molecules with a tunable velocity, a narrow velocity spread, and a high state purity can be produced. These tamed molecular beams find applications in high resolution spectroscopy, cold molecule trapping, and controlled scattering experiments. The quality and purity of the packets of molecules emerging from the decelerator critically depend on the specifications of the decelerator, but also on the characteristics of the molecular beam pulse with which the decelerator is loaded. We consider three frequently used molecular beam sources, and discuss their suitability for molecular beam deceleration experiments, in particular with the application in crossed beam scattering in mind. The performance of two valves in particular, the Nijmegen Pulsed Valve and the Jordan Valve, is illustrated by decelerating ND <sub>3</sub> molecules in a 2.6 meter-long Stark decelerator. We describe a protocol to characterize the valve, and to optimally load the pulse of molecules into the decelerator. We characterize the valves regarding opening time duration, optimal valve-to-skimmer distance, mean velocity, velocity spread, state purity, and relative intensity.</p>","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-015-0021-y","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33919361","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-01-01Epub Date: 2015-03-24DOI: 10.1140/epjti/s40485-015-0016-8
Adrian Ghita, Flavius C Pascut, Virginie Sottile, Chris Denning, Ioan Notingher
Stem cell therapy is widely acknowledged as a key medical technology of the 21st century which may provide treatments for many currently incurable diseases. These cells have an enormous potential for cell replacement therapies to cure diseases such as Parkinson's disease, diabetes and cardiovascular disorders, as well as in tissue engineering as a reliable cell source for providing grafts to replace and repair diseased tissues. Nevertheless, the progress in this field has been difficult in part because of lack of techniques that can measure non-invasively the molecular properties of cells. Such repeated measurements can be used to evaluate the culture conditions during differentiation, cell quality and phenotype heterogeneity of stem cell progeny. Raman spectroscopy is an optical technique based on inelastic scattering of laser photons by molecular vibrations of cellular molecules and can be used to provide chemical fingerprints of cells or organelles without fixation, lysis or use of labels and other contrast enhancing chemicals. Because differentiated cells are specialized to perform specific functions, these cells produce specific biochemicals that can be detected by Raman micro-spectroscopy. This mini-review paper describes applications of Raman micro-scpectroscopy to measure moleculare properties of stem cells during differentiation in-vitro. The paper focuses on time- and spatially-resolved Raman spectral measurements that allow repeated investigation of live stem cells in-vitro.
{"title":"Applications of Raman micro-spectroscopy to stem cell technology: label-free molecular discrimination and monitoring cell differentiation.","authors":"Adrian Ghita, Flavius C Pascut, Virginie Sottile, Chris Denning, Ioan Notingher","doi":"10.1140/epjti/s40485-015-0016-8","DOIUrl":"https://doi.org/10.1140/epjti/s40485-015-0016-8","url":null,"abstract":"<p><p>Stem cell therapy is widely acknowledged as a key medical technology of the 21st century which may provide treatments for many currently incurable diseases. These cells have an enormous potential for cell replacement therapies to cure diseases such as Parkinson's disease, diabetes and cardiovascular disorders, as well as in tissue engineering as a reliable cell source for providing grafts to replace and repair diseased tissues. Nevertheless, the progress in this field has been difficult in part because of lack of techniques that can measure non-invasively the molecular properties of cells. Such repeated measurements can be used to evaluate the culture conditions during differentiation, cell quality and phenotype heterogeneity of stem cell progeny. Raman spectroscopy is an optical technique based on inelastic scattering of laser photons by molecular vibrations of cellular molecules and can be used to provide chemical fingerprints of cells or organelles without fixation, lysis or use of labels and other contrast enhancing chemicals. Because differentiated cells are specialized to perform specific functions, these cells produce specific biochemicals that can be detected by Raman micro-spectroscopy. This mini-review paper describes applications of Raman micro-scpectroscopy to measure moleculare properties of stem cells during differentiation in-vitro. The paper focuses on time- and spatially-resolved Raman spectral measurements that allow repeated investigation of live stem cells in-vitro.</p>","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-015-0016-8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33996886","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-01-01Epub Date: 2015-02-21DOI: 10.1140/epjti/s40485-014-0011-5
Ann-Lauriene Haag, Yoshihiko Nagai, R Bruce Lennox, Peter Grütter
Cantilever based sensors are a promising tool for a very diverse spectrum of biological sensors. They have been used for the detection of proteins, DNA, antigens, bacteria viruses and many other biologically relevant targets. Although cantilever sensing has been described for over 20 years, there are still no viable commercial cantilever-based sensing products on the market. Several reasons can be found for this - a lack of detailed understanding of the origin of signals being an important one. As a consequence application-relevant issues such as shelf life and robust protocols distinguishing targets from false responses have received very little attention. Here, we will discuss a cantilever sensing platform combined with an electrochemical system. The detected surface stress signal is modulated by applying a square wave potential to a gold coated cantilever. The square wave potential induces adsorption and desorption onto the gold electrode surface as well as possible structural changes of the target and probe molecules on the cantilever surface resulting in a measurable surface stress change. What sets this approach apart from regular cantilever sensing is that the quantification and identification of observed signals due to target-probe interactions are not only a function of stress value (i.e. amplitude), but also of the temporal evolution of the stress response as a function of the rate and magnitude of the applied potential change, and the limits of the potential change. This paper will discuss three issues that play an important role in future successful applications of cantilever-based sensing. First, we will discuss what is required to achieve a large surface stress signal to improve sensitivity. Second, a mechanism to achieve an optimal probe density is described that improves the signal-to-noise ratio and response times of the sensor. Lastly, lifetime and long term measurements are discussed.
{"title":"Characterization of a gold coated cantilever surface for biosensing applications.","authors":"Ann-Lauriene Haag, Yoshihiko Nagai, R Bruce Lennox, Peter Grütter","doi":"10.1140/epjti/s40485-014-0011-5","DOIUrl":"https://doi.org/10.1140/epjti/s40485-014-0011-5","url":null,"abstract":"<p><p>Cantilever based sensors are a promising tool for a very diverse spectrum of biological sensors. They have been used for the detection of proteins, DNA, antigens, bacteria viruses and many other biologically relevant targets. Although cantilever sensing has been described for over 20 years, there are still no viable commercial cantilever-based sensing products on the market. Several reasons can be found for this - a lack of detailed understanding of the origin of signals being an important one. As a consequence application-relevant issues such as shelf life and robust protocols distinguishing targets from false responses have received very little attention. Here, we will discuss a cantilever sensing platform combined with an electrochemical system. The detected surface stress signal is modulated by applying a square wave potential to a gold coated cantilever. The square wave potential induces adsorption and desorption onto the gold electrode surface as well as possible structural changes of the target and probe molecules on the cantilever surface resulting in a measurable surface stress change. What sets this approach apart from regular cantilever sensing is that the quantification and identification of observed signals due to target-probe interactions are not only a function of stress value (i.e. amplitude), but also of the temporal evolution of the stress response as a function of the rate and magnitude of the applied potential change, and the limits of the potential change. This paper will discuss three issues that play an important role in future successful applications of cantilever-based sensing. First, we will discuss what is required to achieve a large surface stress signal to improve sensitivity. Second, a mechanism to achieve an optimal probe density is described that improves the signal-to-noise ratio and response times of the sensor. Lastly, lifetime and long term measurements are discussed.</p>","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-014-0011-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33983637","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2015-01-01Epub Date: 2015-08-21DOI: 10.1140/epjti/s40485-015-0023-9
J C Oller, L Ellis-Gibbings, F Ferreira da Silva, P Limão-Vieira, G García
We report a novel experimental setup for studying collision induced products resulting from the interaction of anionic beams with a neutral gas-phase molecular target. The precursor projectile was admitted into vacuum through a commercial pulsed valve, with the anionic beam produced in a hollow cathode discharge-induced plasma, and guided to the interaction region by a set of deflecting plates where it was made to interact with the target beam. Depending on the collision energy regime, negative and positive species can be formed in the collision region and ions were time-of-flight (TOF) mass-analysed. Here, we present data on O2 precursor projectile, where we show clear evidence of O- and O2- formation from the hollow cathode source as well as preliminary results on the interaction of these anions with nitromethane, CH3NO2. The negative ions formed in such collisions were analysed using time-of-flight mass spectrometry. The five most dominant product anions were assigned to H-, O-, NO-, CNO- and CH3NO2-.
{"title":"Novel experimental setup for time-of-flight mass spectrometry ion detection in collisions of anionic species with neutral gas-phase molecular targets.","authors":"J C Oller, L Ellis-Gibbings, F Ferreira da Silva, P Limão-Vieira, G García","doi":"10.1140/epjti/s40485-015-0023-9","DOIUrl":"https://doi.org/10.1140/epjti/s40485-015-0023-9","url":null,"abstract":"<p><p>We report a novel experimental setup for studying collision induced products resulting from the interaction of anionic beams with a neutral gas-phase molecular target. The precursor projectile was admitted into vacuum through a commercial pulsed valve, with the anionic beam produced in a hollow cathode discharge-induced plasma, and guided to the interaction region by a set of deflecting plates where it was made to interact with the target beam. Depending on the collision energy regime, negative and positive species can be formed in the collision region and ions were time-of-flight (TOF) mass-analysed. Here, we present data on O<sub>2</sub> precursor projectile, where we show clear evidence of O<sup>-</sup> and O<sub>2</sub><sup>-</sup> formation from the hollow cathode source as well as preliminary results on the interaction of these anions with nitromethane, CH<sub>3</sub>NO<sub>2</sub>. The negative ions formed in such collisions were analysed using time-of-flight mass spectrometry. The five most dominant product anions were assigned to H<sup>-</sup>, O<sup>-</sup>, NO<sup>-</sup>, CNO<sup>-</sup> and CH<sub>3</sub>NO<sub>2</sub><sup>-</sup>.</p>","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2015-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-015-0023-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33964355","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2014-12-01DOI: 10.1140/epjti/s40485-014-0010-6
B. Bircher, Roger Krenger, T. Braun
{"title":"Influence of squeeze-film damping on higher-mode microcantilever vibrations in liquid","authors":"B. Bircher, Roger Krenger, T. Braun","doi":"10.1140/epjti/s40485-014-0010-6","DOIUrl":"https://doi.org/10.1140/epjti/s40485-014-0010-6","url":null,"abstract":"","PeriodicalId":44591,"journal":{"name":"EPJ Techniques and Instrumentation","volume":null,"pages":null},"PeriodicalIF":1.0,"publicationDate":"2014-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1140/epjti/s40485-014-0010-6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"63972176","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}