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USC-ENet: a high-efficiency model for the diagnosis of liver tumors combining B-mode ultrasound and clinical data. USC-ENet:结合b超和临床资料高效诊断肝脏肿瘤的模型。
IF 6 3区 医学 Pub Date : 2023-03-19 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-023-00217-y
Tingting Zhao, Zhiyong Zeng, Tong Li, Wenjing Tao, Xing Yu, Tao Feng, Rui Bu

Purpose: Ultrasound image acquisition has the advantages of being low cost, rapid, and non-invasive, and it does not produce radiation. Currently, ultrasound is widely used in the diagnosis of liver tumors. However, owing to the complex presentation and diverse features of benign and malignant liver tumors, accurate diagnosis of liver tumors using ultrasound is difficult even for experienced radiologists. In recent years, artificial intelligence-assisted diagnosis has proven to provide effective support to radiologists. However, there is room for further improvement in the existing ultrasound artificial intelligence diagnostic model of liver tumor. First, the image diagnostic model may not fully consider relevant clinical data in the decision-making process. Second, owing to the difficulty in collecting biopsy pathology and physician-labeled ultrasound data of liver tumors, training datasets are usually small, and commonly used large neural networks tend to overfit on small datasets, which seriously affects the generalization of the model.

Methods: In this study, we propose a deep learning-assisted diagnosis model called USC-ENet, which integrates B-mode ultrasound features of liver tumors and clinical data of patients, and we design a small neural network specifically for small-scale medical images combined with an attention mechanism.

Results and conclusion: Real data from 542 patients with liver tumors (N = 2168 images) are used during model training and validation. Experiments show that USC-ENet can achieve a good classification effect (area under the curve = 0.956, sensitivity = 0.915, and specificity = 0.880) after small-scale data training, and it has certain interpretability, showing good potential for clinical adoption. In conclusion, our model provides not only a reliable second opinion for radiologists but also a reference for junior radiologists who lack clinical experience.

目的:超声图像采集具有成本低、快速、无创、不产生辐射等优点。目前,超声已广泛应用于肝脏肿瘤的诊断。然而,由于良性和恶性肝脏肿瘤的复杂表现和不同特征,即使对于有经验的放射科医生来说,使用超声准确诊断肝脏肿瘤也是困难的。近年来,人工智能辅助诊断已被证明为放射科医生提供了有效的支持。然而,现有的肝脏肿瘤超声人工智能诊断模型还有进一步改进的空间。首先,图像诊断模型在决策过程中可能没有充分考虑相关的临床数据。其次,由于难以收集肝肿瘤的活检病理和医生标记的超声数据,训练数据集通常较小,常用的大型神经网络往往在较小的数据集上过度拟合,严重影响了模型的泛化能力。方法:在本研究中,我们提出了一个名为USC-ENet的深度学习辅助诊断模型,该模型集成了肝脏肿瘤的B模式超声特征和患者的临床数据,并结合注意力机制设计了一个专门针对小规模医学图像的小神经网络。结果和结论:在模型训练和验证过程中使用了542名肝肿瘤患者的真实数据(N=2168张图像)。实验表明,经过小规模的数据训练,USC-ENet可以达到良好的分类效果(曲线下面积=0.956,灵敏度=0.915,特异性=0.880),并且具有一定的可解释性,显示出良好的临床应用潜力。总之,我们的模型不仅为放射科医生提供了可靠的第二意见,而且为缺乏临床经验的初级放射科医生也提供了参考。
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引用次数: 0
Intelligent antepartum fetal monitoring via deep learning and fusion of cardiotocographic signals and clinical data. 基于深度学习和心电信号与临床数据融合的智能产前胎儿监测。
IF 6 3区 医学 Pub Date : 2023-03-19 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-023-00219-w
Zhen Cao, Guoqiang Wang, Ling Xu, Chaowei Li, Yuexing Hao, Qinqun Chen, Xia Li, Guiqing Liu, Hang Wei

Purpose: Cardiotocography (CTG), which measures uterine contraction (UC) and fetal heart rate (FHR), is a crucial tool for assessing fetal health during pregnancy. However, traditional computerized cardiotocography (cCTG) approaches have non-negligible calibration errors in feature extraction and heavily rely on the expertise and prior experience to define diagnostic features from CTG or FHR signals. Although previous works have studied deep learning methods for extracting CTG or FHR features, these methods still neglect the clinical information of pregnant women.

Methods: In this paper, we proposed a multimodal deep learning architecture (MMDLA) for intelligent antepartum fetal monitoring that is capable of performing automatic CTG feature extraction, fusion with clinical data and classification. The multimodal feature fusion was achieved by concatenating high-level CTG features, which were extracted from preprocessed CTG signals via a convolution neural network (CNN) with six convolution layers and five fully connected layers, and the clinical data of pregnant women. Eventually, light gradient boosting machine (LGBM) was implemented as fetal status assessment classifier. The effectiveness of MMDLA was evaluated using a dataset of 16,355 cases, each of which includes FHR signal, UC signal and pertinent clinical data like maternal age and gestational age.

Results: With an accuracy of 90.77% and an area under the curve (AUC) value of 0.9201, the multimodal features performed admirably. The data imbalance issue was also effectively resolved by the LGBM classifier, with a normal-F1 value of 0.9376 and an abnormal-F1 value of 0.8223.

Conclusion: In summary, the proposed MMDLA is conducive to the realization of intelligent antepartum fetal monitoring.

目的:测量子宫收缩(UC)和胎心率(FHR)的心脏分娩图(CTG)是评估妊娠期胎儿健康的重要工具。然而,传统的计算机心脏分娩描记术(cCTG)方法在特征提取中具有不可忽略的校准误差,并且严重依赖专业知识和先前的经验来定义CTG或FHR信号的诊断特征。尽管以前的工作已经研究了提取CTG或FHR特征的深度学习方法,但这些方法仍然忽视了孕妇的临床信息。方法:在本文中,我们提出了一种用于智能产前胎儿监测的多模式深度学习架构(MMDLA),该架构能够进行自动CTG特征提取、与临床数据融合和分类。多模式特征融合是通过级联高级CTG特征和孕妇的临床数据来实现的,这些特征是通过具有六个卷积层和五个完全连接层的卷积神经网络(CNN)从预处理的CTG信号中提取的。最终,采用光梯度增强机(LGBM)作为胎儿状态评估分类器。MMDLA的有效性是使用16355例病例的数据集进行评估的,每个病例都包括FHR信号、UC信号和相关的临床数据,如产妇年龄和胎龄。结果:多峰特征的准确率为90.77%,曲线下面积(AUC)值为0.9201,表现令人钦佩。LGBM分类器也有效地解决了数据不平衡问题,其正常-F1值为0.9376,异常-F1值值为0.8223。结论:总之,所提出的MMDLA有助于实现智能产前胎儿监测。
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引用次数: 0
Towards data-driven tele-medicine intelligence: community-based mental healthcare paradigm shift for smart aging amid COVID-19 pandemic. 迈向数据驱动的远程医疗智能:2019冠状病毒病大流行期间面向智能老龄化的社区精神卫生保健范式转变
IF 6 3区 医学 Pub Date : 2023-03-14 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-022-00198-4
Lan Cheng, W K Chan, Yi Peng, Harry Qin

Purpose: Telemedicine are experiencing an unprecedented boom globally since the beginning of the COVID-19 pandemic. As the most vulnerable groups amid COVID-19, the digital delivery of healthcare poses great challenges to the elderly population, caregiver, health service providers, and health policy makers. To bridge the service delivery gaps between the telemedicine demand side and supply side, explore evidence-based approach for integrated care, address challenges for aging policy, and build foundation for the development of data-driven and community-based telemedicine, our R&D team applied translational research to design and develop telemedicine "SMART" for enhancing elderly mental health wellbeing amid COVID-19. Our aim is to investigate the preparedness mechanisms of mental health disease including response, intervention, and connection these three healthcare delivery pipelines with the collection, consolidation, and synergy of heath parameters and social determinants, using data analytics approach to achieve Evidence-Based Medicine (EBM).

Methods: A mix of quantitative and qualitative research design for scientifically rigorous consultation and analysis was conducted from Jan 2020 to June 2021 in Hong Kong. An exploratory and descriptive qualitative design was used in this study. The data were collected through focus group discussions conducted from elderly and their caregivers living in 10 main districts of Hong Kong. Our research pilot tested "SMART" targeting for elderly with mental health improvement needs. Baseline questionnaire with 110 tele-medicine product users includes questions on demographic information, self-rated mental health digital adoption. The follow-up five focus group discussions with 57 users (elderly and their caregivers) further explore the social determinants of telemedicine transformation and help propose the integrated telemedicine paradigm shift framework establishment, development, and enhancement.

Results: Grounded on the baseline needs assessment and feedbacks collected, it is evident that multi-dimensional health information from the four various streams (community, clinic, home, remote) and customized digital health solutions are playing a key role in addressing elderly mental health digital service needs and bridging digital divide. The designed tele-medicine product lines up health service provider (supplier side) and elderly specific needs (demand side) with our three-level design, enables elderly and their families to follow and control their own health management and connect with the service provider, community of practice (CoP), and health policy makers.

Conclusion: It's beneficial to involve elderly and gerontechnology stakeholders as part of Community-Based Participatory Research (CBPR) before and throughout the developing and delivery phases an integrated and age-friendly digital intervention. The challenges in

目的:自新冠肺炎大流行开始以来,远程医疗在全球正经历着前所未有的繁荣。作为新冠肺炎中最脆弱的群体,医疗保健的数字化提供给老年人、护理人员、医疗服务提供者和卫生政策制定者带来了巨大挑战。为了弥合远程医疗需求方和供应方之间的服务提供差距,探索综合护理的循证方法,应对老龄化政策的挑战,并为数据驱动和基于社区的远程医疗的发展奠定基础,我们的研发团队应用转化研究来设计和开发远程医疗“SMART”,以增强新冠肺炎期间老年人的心理健康。我们的目的是调查心理健康疾病的准备机制,包括反应、干预,以及将这三个医疗保健提供渠道与健康参数和社会决定因素的收集、整合和协同作用联系起来,使用数据分析方法实现循证医学(EBM)。方法:2020年1月至2021年6月在香港进行了定量和定性相结合的研究设计,以进行科学严谨的咨询和分析。本研究采用了探索性和描述性的定性设计。数据是通过对居住在香港10个主要地区的老年人及其护理人员进行焦点小组讨论收集的。我们的研究试点测试了针对有心理健康改善需求的老年人的“SMART”。110名远程医疗产品用户的基线调查问卷包括人口统计信息、自我评定的心理健康数字采用问题。与57名用户(老年人及其护理人员)进行的后续五个焦点小组讨论进一步探讨了远程医疗转型的社会决定因素,并有助于提出综合远程医疗范式转变框架的建立、发展和增强。结果:基于基线需求评估和收集的反馈,很明显,来自四个不同流(社区、诊所、家庭、远程)的多维健康信息和定制的数字健康解决方案在满足老年人心理健康数字服务需求和弥合数字鸿沟方面发挥着关键作用。设计的远程医疗产品通过我们的三级设计将健康服务提供商(供应商方)和老年人的特定需求(需求方)结合起来,使老年人及其家人能够遵循和控制自己的健康管理,并与服务提供商、实践社区和健康政策制定者建立联系。结论:在开发和实施综合的、对年龄友好的数字干预之前和整个阶段,让老年人和老年技术利益相关者参与社区参与研究(CBPR)是有益的。老年人和护理人员反映的在应用和传播远程医疗方面的挑战可以作为进一步发展的重要投入和可持续综合老年人初级保健框架的指标。补充信息:在线版本包含补充材料,可访问10.1007/s13755-022-00198-4。
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引用次数: 3
MDU-Net: multi-scale densely connected U-Net for biomedical image segmentation. MDU-Net:用于生物医学图像分割的多尺度密集连接U-Net。
IF 6 3区 医学 Pub Date : 2023-03-13 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-022-00204-9
Jiawei Zhang, Yanchun Zhang, Yuzhen Jin, Jilan Xu, Xiaowei Xu

Biomedical image segmentation plays a central role in quantitative analysis, clinical diagnosis, and medical intervention. In the light of the fully convolutional networks (FCN) and U-Net, deep convolutional networks (DNNs) have made significant contributions to biomedical image segmentation applications. In this paper, we propose three different multi-scale dense connections (MDC) for the encoder, the decoder of U-shaped architectures, and across them. Based on three dense connections, we propose a multi-scale densely connected U-Net (MDU-Net) for biomedical image segmentation. MDU-Net directly fuses the neighboring feature maps with different scales from both higher layers and lower layers to strengthen feature propagation in the current layer. Multi-scale dense connections, which contain shorter connections between layers close to the input and output, also make a much deeper U-Net possible. Besides, we introduce quantization to alleviate the potential overfitting in dense connections, and further improve the segmentation performance. We evaluate our proposed model on the MICCAI 2015 Gland Segmentation (GlaS) dataset. The three MDC improve U-Net performance by up to 1.8% on test A and 3.5% on test B in the MICCAI Gland dataset. Meanwhile, the MDU-Net with quantization obviously improves the segmentation performance of original U-Net.

生物医学图像分割在定量分析、临床诊断和医疗干预中发挥着核心作用。鉴于全卷积网络(FCN)和U-Net,深度卷积网络(DNN)对生物医学图像分割应用做出了重大贡献。在本文中,我们为U型架构的编码器、解码器以及它们之间提出了三种不同的多尺度密集连接(MDC)。基于三个密集连接,我们提出了一种用于生物医学图像分割的多尺度密集连接U-Net(MDU-Net)。MDU-Net直接融合来自上层和下层的具有不同尺度的相邻特征图,以加强当前层中的特征传播。多尺度密集连接,在靠近输入和输出的层之间包含较短的连接,也使更深的U-Net成为可能。此外,我们引入量化来缓解密集连接中潜在的过拟合,并进一步提高分割性能。我们在MICCAI 2015腺体分割(GlaS)数据集上评估了我们提出的模型。在MICCAI Gland数据集中,三种MDC在测试A和测试B中分别将U-Net性能提高了1.8%和3.5%。同时,量化后的MDU-Net明显提高了原始U-Net的分割性能。
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引用次数: 68
Task-independent auditory probes reveal changes in mental workload during simulated quadrotor UAV training. 任务独立听觉探针揭示了模拟四旋翼无人机训练期间心理负荷的变化。
IF 6 3区 医学 Pub Date : 2023-03-07 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-023-00213-2
Shaodi Wang, Heng Gu, Qunli Yao, Chao Yang, Xiaoli Li, Gaoxiang Ouyang

Objective: The event-related potential (ERP) methods based on laboratory control scenes have been widely used to measure the level of mental workload during operational tasks. In this study, both task difficulty and test time were considered. Auditory probes (ignored task-irrelevant background sounds) were used to explore the changes in mental workload of unmanned aerial vehicle (UAV) operators during task execution and their ERP representations.

Approach: 51 students participated in a 10-day training and test of simulated quadrotor UAV. During the experiment, background sound was played to induce ERP according to the requirements of oddball paradigm, and the relationship between mental workload and the amplitudes of N200 and P300 in ERP was explored.

Main results: Our study shows that the mental workload during operational task training is multi-dimensional, and its changes are affected by bottom-up perception and top-down cognition. The N200 component of the ERP evoked by the auditory probe corresponds to the bottom-up perceptual part; while the P300 component corresponds to the top-down cognitive part, which is positively correlated with the improvement of skill level.

Significance: This paper describes the relationship between ERP induced by auditory probes and mental workload from the perspective of multi-resource theory and human information processing. This suggests that the auditory probe can be used to reveal the mental workload during the training of operational tasks, which not only provides a possible reference for measuring the mental workload, but also provides a possibility for identifying the development of the operator's skill level and evaluating the training effect.

目的:基于实验室控制场景的事件相关电位(ERP)方法已被广泛用于测量操作任务中的心理工作量水平。本研究同时考虑了任务难度和测试时间。听觉探针(被忽略的与任务无关的背景音)用于探索无人机操作员在任务执行过程中心理工作量的变化及其ERP表征。方法:51名学生参加了为期10天的模拟四旋翼无人机训练和测试。实验中,根据oddball范式的要求,播放背景音诱发ERP,探讨了心理负荷与ERP中N200和P300波幅的关系。主要结果:我们的研究表明,操作任务训练中的心理工作量是多维度的,其变化受到自下而上的感知和自上而下的认知的影响。听觉探针诱发的ERP的N200成分对应于自下而上的感知部分;P300成分对应自上而下的认知部分,与技能水平的提高呈正相关。意义:本文从多源理论和人类信息处理的角度,描述了听觉探测诱发的ERP与心理工作量之间的关系。这表明,听觉探针可以用来揭示操作任务训练过程中的心理工作量,这不仅为测量心理工作量提供了可能的参考,也为识别操作员技能水平的发展和评估训练效果提供了可能。
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引用次数: 0
MCA-UNet: multi-scale cross co-attentional U-Net for automatic medical image segmentation. MCA-UNet:用于医学图像自动分割的多尺度交叉共关注U-Net。
IF 6 3区 医学 Pub Date : 2023-01-30 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-022-00209-4
Haonan Wang, Peng Cao, Jinzhu Yang, Osmar Zaiane

Medical image segmentation is a challenging task due to the high variation in shape, size and position of infections or lesions in medical images. It is necessary to construct multi-scale representations to capture image contents from different scales. However, it is still challenging for U-Net with a simple skip connection to model the global multi-scale context. To overcome it, we proposed a dense skip-connection with cross co-attention in U-Net to solve the semantic gaps for an accurate automatic medical image segmentation. We name our method MCA-UNet, which enjoys two benefits: (1) it has a strong ability to model the multi-scale features, and (2) it jointly explores the spatial and channel attentions. The experimental results on the COVID-19 and IDRiD datasets suggest that our MCA-UNet produces more precise segmentation performance for the consolidation, ground-glass opacity (GGO), microaneurysms (MA) and hard exudates (EX). The source code of this work will be released via https://github.com/McGregorWwww/MCA-UNet/.

由于医学图像中感染或病变的形状、大小和位置的高度变化,医学图像分割是一项具有挑战性的任务。有必要构建多尺度表示来捕获来自不同尺度的图像内容。然而,对于具有简单跳过连接的U-Net来说,对全局多尺度上下文进行建模仍然具有挑战性。为了克服这一问题,我们在U-Net中提出了一种具有交叉共同注意的密集跳跃连接,以解决精确自动医学图像分割的语义缺口。我们将我们的方法命名为MCA-UNet,它有两个好处:(1)它具有很强的多尺度特征建模能力,以及(2)它联合探索了空间和通道注意力。新冠肺炎和IDRiD数据集的实验结果表明,我们的MCA-UNet对固结、基质不透明(GGO)、微血管瘤(MA)和硬渗出物(EX)产生了更精确的分割性能。本作品的源代码将通过https://github.com/McGregorWwww/MCA-UNet/.
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引用次数: 3
Design and development of a disease-specific clinical database system to increase the availability of hospital data in China. 设计和开发一个特定疾病的临床数据库系统,以增加中国医院数据的可用性。
IF 6 3区 医学 Pub Date : 2023-01-30 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-023-00211-4
Mimi Liu, Jinni Luo, Lin Li, Xuemei Pan, Shuyan Tan, Weidong Ji, Hongzheng Zhang, Shengsheng Tang, Jingjing Liu, Bin Wu, Zebin Chen, Xiaoying Wu, Yi Zhou

Purpose: In order to meet restrictions and difficulties in the development of hospital medical informatization and clinical databases in China, in this study, a disease-specific clinical database system (DSCDS) was designed and built. It provides support for the full utilization of real world medical big data in clinical research and medical services for specific diseases.

Methods: The development of DSCDS involved (1) requirements analysis on precision medicine, medical big data, and clinical research; (2) design schematics and basic architecture; (3) standard datasets of specific diseases consisting of common data elements (CDEs); (4) collection and aggregation of specific disease data scattered in various medical business systems of the hospital; (5) governance and quality improvement of specific disease data; (6) data storage and computing; and (7) design of data application modules.

Results: A DSCDS for liver cirrhosis was created in the gastrointestinal department of a 3A grade hospital in China and had more than nine data application modules. Based on this DSCDS, a series of clinical studies are being carried out, such as retrospective or prospective cohorts, prognostic studies using multimodal data, and follow-up studies.

Conclusion: The development of the DSCDS for liver cirrhosis in this paper provides experience and reference for the design and development of DSCDSs for other specific diseases in China; it can even expand to the development of DSCDSs in other countries if they have the demand for DSCDS and the same or better medical informatization foundation. DSCDS has more accurate, standard, comprehensive, multimodal and usable data of specific diseases than the general clinical database system and clinical data repository (CDR) and provides a credible data foundation for medical research, clinical decision-making and improving the medical service quality of specific diseases.

Supplementary information: The online version contains supplementary material available at 10.1007/s13755-023-00211-4.

目的:为了应对我国医院医疗信息化和临床数据库发展的限制和困难,本研究设计并构建了一个疾病特异性临床数据库系统(DSCDS)。它为在特定疾病的临床研究和医疗服务中充分利用真实世界的医疗大数据提供了支持。方法:DSCDS的开发涉及(1)精准医学、医疗大数据和临床研究的需求分析;(2) 设计原理图和基本架构;(3) 由常见数据元素(CDE)组成的特定疾病的标准数据集;(4) 收集和汇总分散在医院各种医疗业务系统中的特定疾病数据;(5) 具体疾病数据的治理和质量改进;(6) 数据存储和计算;(7)数据应用模块的设计。结果:在中国一家3A级医院的胃肠科创建了一个肝硬化DSCDS,它有9个以上的数据应用模块。基于该DSCDS,正在进行一系列临床研究,如回顾性或前瞻性队列、使用多模式数据的预后研究和随访研究。结论:本文研制的肝硬化DSCDS为我国其他特定疾病DSCDS的设计和开发提供了经验和借鉴;如果其他国家对DSCDS有需求,有相同或更好的医疗信息化基础,甚至可以扩展到DSCDS的发展。DSCDS比一般的临床数据库系统和临床数据库(CDR)具有更准确、标准、全面、多模式和可用的特定疾病数据,为医学研究、临床决策和提高特定疾病的医疗服务质量提供了可靠的数据基础。补充信息:在线版本包含补充材料,可访问10.1007/s13755-023-00211-4。
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引用次数: 0
Target area distillation and section attention segmentation network for accurate 3D medical image segmentation. 目标区域提取和截面注意力分割网络用于精确的三维医学图像分割。
IF 6 3区 医学 Pub Date : 2023-01-30 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-022-00200-z
Ruiwei Xie, Dan Pan, An Zeng, Xiaowei Xu, Tianchen Wang, Najeeb Ullah, Yuzhu Ji

3D medical image segmentation has an essential role in medical image analysis, while attention mechanism has improved the performance by a large margin. However, existing methods obtained the attention coefficient in a small receptive field, resulting in possible performance limitations. Radiologists usually scan all the slices first to have an overall idea of the target, and then analyze regions of interest in multiple 2D views in clinic practice. We simulate radiologists' recognition process and propose to exploit the 3D context information in a deeper manner for accurate 3D medical images segmentation. Due to the similarity of human body structure, medical images of different populations have highly similar shape and location information, so we use target region distillation to extract the common segmented region information. Particularly, we proposed two optimizations including Target Area Distillation and Section Attention. Target Area Distillation adds positions information to the original input to let the network has an initial attention of the target, while section attention performs attention extraction in three 2D sections thus with large range of receptive field. We compare our method against several popular networks in two public datasets including ImageCHD and COVID-19. Experimental results show that our proposed method improves the segmentation Dice score by 2-4% over the state-of-the-art methods. Our code has been released to the public (Anonymous link).

三维医学图像分割在医学图像分析中起着至关重要的作用,而注意力机制在很大程度上提高了分割性能。然而,现有的方法在小的感受野中获得了注意力系数,导致可能的性能限制。放射科医生通常首先扫描所有切片,对目标有一个总体的了解,然后在临床实践中分析多个2D视图中的感兴趣区域。我们模拟了放射科医生的识别过程,并提出以更深入的方式利用3D上下文信息进行精确的3D医学图像分割。由于人体结构的相似性,不同人群的医学图像具有高度相似的形状和位置信息,因此我们使用目标区域提取来提取常见的分割区域信息。特别地,我们提出了两个优化,包括目标区域蒸馏和部分注意。目标区域提取在原始输入中添加位置信息,使网络对目标具有初始注意力,而区间注意力在三个2D区间中进行注意力提取,从而具有大范围的感受野。我们将我们的方法与包括ImageCHD和新冠肺炎在内的两个公共数据集中的几个流行网络进行了比较。实验结果表明,与现有技术相比,我们提出的方法将分割骰子得分提高了2-4%。我们的代码已向公众发布(匿名链接)。
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引用次数: 1
A deep reinforcement learning-based wireless body area network offloading optimization strategy for healthcare services. 一种用于医疗服务的基于深度强化学习的无线身体区域网络卸载优化策略。
IF 6 3区 医学 Pub Date : 2023-01-28 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-023-00212-3
Yingqun Chen, Shaodong Han, Guihong Chen, Jiao Yin, Kate Nana Wang, Jinli Cao

Wireless body area network (WBAN) is widely adopted in healthcare services, providing remote real-time and continuous healthcare monitoring. With the massive increase of detective sensor data, WBAN is largely restricted by limited storage and computation capacity, resulting in severely decreased efficiency and reliability. Mobile edge computing (MEC) technique can be combined with WBAN to resolve this issue. This paper studies the joint optimization problem of computational offloading and resource allocation (JCORA) in MEC for healthcare service scenarios. We formulate JCORA as a Markov decision process and propose a deep deterministic policy gradient-based WBAN offloading strategy (DDPG-WOS) to optimize time delay and energy consumption in interfered transmission channels. This scheme employs MEC to mitigate the computation pressure on a single WBAN and increase the transmission ability. Further, DDPG-WOS optimizes the offloading strategy-making process by considering the channel condition, transmission quality, computation ability and energy consumption. Simulation results verify the effectiveness of the proposed optimization schema in reducing energy consumption and computation latency and increasing the utility of WBAN compared to two competitive solutions.

无线身体区域网络(WBAN)在医疗保健服务中被广泛采用,提供远程实时和连续的医疗保健监测。随着探测传感器数据的大量增加,WBAN在很大程度上受到存储和计算能力的限制,导致效率和可靠性严重下降。移动边缘计算(MEC)技术可以与WBAN相结合来解决这个问题。本文研究了医疗服务场景下MEC中计算卸载和资源分配(JCORA)的联合优化问题。我们将JCORA公式化为马尔可夫决策过程,并提出了一种基于深度确定性策略梯度的WBAN卸载策略(DDPG-WOS),以优化受干扰传输信道中的时延和能耗。该方案采用MEC来减轻单个WBAN的计算压力,提高传输能力。此外,DDPG-WOS通过考虑信道条件、传输质量、计算能力和能耗来优化卸载策略的制定过程。仿真结果验证了与两种竞争解决方案相比,所提出的优化方案在降低能耗和计算延迟以及提高WBAN实用性方面的有效性。
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引用次数: 4
Knowledge and data-driven prediction of organ failure in critical care patients. 重症监护患者器官衰竭的知识和数据驱动预测。
IF 6 3区 医学 Pub Date : 2023-01-23 eCollection Date: 2023-12-01 DOI: 10.1007/s13755-023-00210-5
Xinyu Ma, Meng Wang, Sihan Lin, Yuhao Zhang, Yanjian Zhang, Wen Ouyang, Xing Liu

Purpose: The early detection of organ failure mitigates the risk of post-intensive care syndrome and long-term functional impairment. The aim of this study is to predict organ failure in real-time for critical care patients based on a data-driven and knowledge-driven machine learning method (DKM) and provide explanations for the prediction by incorporating a medical knowledge graph.

Methods: The cohort of this study was a subset of the 4,386 adult Intensive Care Unit (ICU) patients from the MIMIC-III dataset collected between 2001 and 2012, and the primary outcome was the Delta Sequential Organ Failure Assessment (SOFA) score. A real-time Delta SOFA score prediction model was developed with two key components: an improved deep learning temporal convolutional network (S-TCN) and a graph-embedding feature extraction method based on a medical knowledge graph. Entities and relations related to organ failure were extracted from the Unified Medical Language System to build the medical knowledge graph, and patient data were mapped onto the graph to extract the embeddings. We measured the performance of our DKM approach with cross-validation to avoid the formation of biased assessments.

Results: An area under the receiver operating characteristic curve (AUC) of 0.973, a precision of 0.923, a NPV of 0.989, and an F1 score of 0.927 were achieved using the DKM approach, which significantly outperformed the baseline methods. Additionally, the performance remained stable following external validation on the eICU dataset, which consists of 2,816 admissions (AUC = 0.981, precision = 0.860, NPV = 0.984). Visualization of feature importance for the Delta SOFA score and their relationships on the basic clinical medical (BCM) knowledge graph provided a model explanation.

Conclusion: The use of an improved TCN model and a medical knowledge graph led to substantial improvement in prediction accuracy, providing generalizability and an independent explanation for organ failure prediction in critical care patients. These findings show the potential of incorporating prior domain knowledge into machine learning models to inform care and service planning.

Supplementary information: The online version of this article contains supplementary material available 10.1007/s13755-023-00210-5.

目的:早期发现器官衰竭可降低重症监护后综合征和长期功能损害的风险。本研究的目的是基于数据驱动和知识驱动的机器学习方法(DKM)实时预测重症监护患者的器官衰竭,并通过结合医学知识图为预测提供解释。方法:本研究的队列是2001年至2012年间收集的MIMIC-III数据集中4386名成人重症监护室(ICU)患者的子集,主要结果是德尔塔顺序器官衰竭评估(SOFA)评分。开发了一个实时Delta SOFA分数预测模型,该模型由两个关键组件组成:改进的深度学习时间卷积网络(S-TCN)和基于医学知识图的图嵌入特征提取方法。从统一医学语言系统中提取与器官衰竭相关的实体和关系以构建医学知识图,并将患者数据映射到图上以提取嵌入。我们通过交叉验证来衡量DKM方法的性能,以避免形成有偏见的评估。结果:使用DKM方法获得了0.973的受试者工作特征曲线下面积(AUC)、0.923的精度、0.989的NPV和0.927的F1分数,显著优于基线方法。此外,在eICU数据集上进行外部验证后,性能保持稳定,该数据集包括2816例入院(AUC = 0.981,精度 = 0.860,NPV = 0.984)。德尔塔SOFA评分的特征重要性及其在基础临床医学(BCM)知识图上的关系的可视化提供了模型解释。结论:使用改进的TCN模型和医学知识图显著提高了预测准确性,为重症监护患者的器官衰竭预测提供了可推广性和独立解释。这些发现显示了将先验领域知识纳入机器学习模型以为护理和服务规划提供信息的潜力。补充信息:本文的在线版本包含补充材料10.1007/s13755-023-00210-5。
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引用次数: 1
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