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Bleaching physiology: who's the 'weakest link' - host vs. symbiont? 漂白生理学:谁是“最薄弱的环节”——宿主还是共生体?
IF 3.8 Q1 Medicine Pub Date : 2022-03-14 DOI: 10.1042/ETLS20210228
Stéphane Roberty, Jean-Christophe Plumier

Environmental stress, such as an increase in the sea surface temperature, triggers coral bleaching, a profound dysfunction of the mutualist symbiosis between the host cnidarians and their photosynthetic dinoflagellates of the Family Symbiodiniaceae. Because of climate change, mass coral bleaching events will increase in frequency and severity in the future, threatening the persistence of this iconic marine ecosystem at global scale. Strategies adapted to coral reefs preservation and restoration may stem from the identification of the succession of events and of the different molecular and cellular contributors to the bleaching phenomenon. To date, studies aiming to decipher the cellular cascade leading to temperature-related bleaching, emphasized the involvement of reactive species originating from compromised bioenergetic pathways (e.g. cellular respiration and photosynthesis). These molecules are responsible for damage to various cellular components causing the dysregulation of cellular homeostasis and the breakdown of symbiosis. In this review, we synthesize the current knowledge available in the literature on the cellular mechanisms caused by thermal stress, which can initiate or participate in the cell cascade leading to the loss of symbionts, with a particular emphasis on the role of each partner in the initiating processes.

环境压力,如海水表面温度的升高,会引发珊瑚白化,这是共生菌科寄主刺胞动物和它们的光合鞭毛藻之间共生关系的严重失调。由于气候变化,未来大规模珊瑚白化事件的频率和严重程度将增加,威胁到这一标志性海洋生态系统在全球范围内的持久性。适应于珊瑚礁保护和恢复的策略可能源于对事件演替的识别以及对白化现象的不同分子和细胞贡献者的识别。迄今为止,旨在破译导致温度相关白化的细胞级联的研究强调了源自受损生物能量途径(例如细胞呼吸和光合作用)的反应性物种的参与。这些分子负责破坏各种细胞成分,导致细胞稳态失调和共生关系的破坏。在这篇综述中,我们综合了目前文献中关于热应激引起的细胞机制的现有知识,热应激可以启动或参与导致共生体丧失的细胞级联反应,并特别强调了每个伙伴在启动过程中的作用。
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引用次数: 3
Impacts of ocean warming and acidification on calcifying coral reef taxa: mechanisms responsible and adaptive capacity. 海洋变暖和酸化对钙化珊瑚礁分类群的影响:机制、责任和适应能力。
IF 3.8 Q1 Medicine Pub Date : 2022-03-14 DOI: 10.1042/ETLS20210226
Christopher E Cornwall, Steeve Comeau, Hollie Putnam, Verena Schoepf

Ocean warming (OW) and acidification (OA) are two of the greatest global threats to the persistence of coral reefs. Calcifying reef taxa such as corals and coralline algae provide the essential substrate and habitat in tropical reefs but are at particular risk due to their susceptibility to both OW and OA. OW poses the greater threat to future reef growth and function, via its capacity to destabilise the productivity of both taxa, and to cause mass bleaching events and mortality of corals. Marine heatwaves are projected to increase in frequency, intensity, and duration over the coming decades, raising the question of whether coral reefs will be able to persist as functioning ecosystems and in what form. OA should not be overlooked, as its negative impacts on the calcification of reef-building corals and coralline algae will have consequences for global reef accretion. Given that OA can have negative impacts on the reproduction and early life stages of both coralline algae and corals, the interdependence of these taxa may result in negative feedbacks for reef replenishment. However, there is little evidence that OA causes coral bleaching or exacerbates the effects of OW on coral bleaching. Instead, there is some evidence that OA alters the photo-physiology of both taxa. Tropical coralline algal possess shorter generation times than corals, which could enable more rapid evolutionary responses. Future reefs will be dominated by taxa with shorter generation times and high plasticity, or those individuals inherently resistant and resilient to both marine heatwaves and OA.

海洋变暖和海洋酸化是全球对珊瑚礁生存的两大威胁。钙化珊瑚礁分类群,如珊瑚和珊瑚藻,为热带珊瑚礁提供了必要的基质和栖息地,但由于它们对OW和OA都很敏感,因此面临特别的风险。OW对未来珊瑚礁的生长和功能构成了更大的威胁,因为它有能力破坏这两个分类群的生产力,并导致大规模的白化事件和珊瑚死亡。预计在未来几十年,海洋热浪的频率、强度和持续时间都将增加,这就提出了一个问题:珊瑚礁是否能够作为功能性生态系统持续存在,以及以何种形式持续存在。OA不应被忽视,因为它对造礁珊瑚和珊瑚藻类钙化的负面影响将对全球珊瑚礁增生产生影响。鉴于OA会对珊瑚藻类和珊瑚的繁殖和早期生命阶段产生负面影响,这些分类群的相互依赖可能会导致珊瑚礁补充的负反馈。然而,几乎没有证据表明OA会导致珊瑚白化或加剧OW对珊瑚白化的影响。相反,有一些证据表明OA改变了这两个分类群的光生理。热带珊瑚藻具有比珊瑚更短的繁殖周期,这可以使更快的进化反应。未来的珊瑚礁将以较短的繁殖周期和高可塑性的分类群为主,或者是那些对海洋热浪和OA具有内在抵抗力和弹性的个体。
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引用次数: 1
How moonlight shapes environments, life histories, and ecological interactions on coral reefs. 月光如何塑造珊瑚礁上的环境、生命史和生态相互作用。
IF 3.8 Q1 Medicine Pub Date : 2022-03-14 DOI: 10.1042/ETLS20210237
Jeffrey S Shima, Craig W Osenberg, Suzanne H Alonzo, Erik G Noonburg, Stephen E Swearer

The lunar cycle drives variation in nocturnal brightness. For the epipelagic larvae of coral reef organisms, nocturnal illumination may have widespread and underappreciated consequences. At sea, the onset of darkness coincides with an influx of mesopelagic organisms to shallow water (i.e. 'diel vertical migrants') that include predators (e.g. lanternfishes) and prey (zooplankton) of zooplanktivorous coral reef larvae. Moonlight generally suppresses this influx, but lunar periodicity in the timing and intensity of nocturnal brightness may affect vertically migrating predators and prey differently. A major turnover of species occurs at sunset on the reef, with diurnal species seeking shelter and nocturnal species emerging to hunt. The hunting ability of nocturnal reef-based predators is aided by the light of the moon. Consequently, variation in nocturnal illumination is likely to shape the timing of reproduction, larval development, and settlement for many coral reef organisms. This synthesis underscores the potential importance of trophic linkages between coral reefs and adjacent pelagic ecosystems, facilitated by the diel migrations of mesopelagic organisms and the ontogenetic migrations of coral reef larvae. Research is needed to better understand the effects of lunar cycles on life-history strategies, and the potentially disruptive effects of light pollution, turbidity, and climate-driven changes to nocturnal cloud cover. These underappreciated threats may alter patterns of nocturnal illumination that have shaped the evolutionary history of many coral reef organisms, with consequences for larval survival and population replenishment that could rival or exceed other effects arising from climate change.

月亮周期导致夜间亮度的变化。对于珊瑚礁生物的上层幼虫来说,夜间照明可能会产生广泛而不被重视的后果。在海上,夜幕降临的同时,中层生物也涌入了浅水区。包括捕食者(如灯笼鱼)和以浮游动物为食的珊瑚礁幼虫的猎物(浮游动物)。月光通常会抑制这种涌入,但月亮在时间和夜间亮度上的周期性可能会对垂直迁徙的捕食者和猎物产生不同的影响。主要的物种更替发生在日落时分的珊瑚礁上,白天活动的物种寻找庇护,夜间活动的物种出现狩猎。夜间活动的珊瑚礁捕食者的捕猎能力得益于月光。因此,夜间光照的变化可能会影响许多珊瑚礁生物的繁殖、幼虫发育和定居的时间。这种综合强调了珊瑚礁和邻近的远洋生态系统之间的营养联系的潜在重要性,这种联系是由中远洋生物的昼夜迁移和珊瑚礁幼虫的个体发生迁移所促进的。需要进行研究,以更好地了解月球周期对生命史策略的影响,以及光污染、浑浊和气候驱动的变化对夜间云量的潜在破坏性影响。这些未被重视的威胁可能会改变夜间照明模式,而夜间照明模式塑造了许多珊瑚礁生物的进化史,其对幼虫生存和种群补充的影响可能与气候变化引起的其他影响相媲美或超过。
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引用次数: 2
Coral-microbe interactions: their importance to reef function and survival. 珊瑚与微生物的相互作用:它们对珊瑚礁功能和生存的重要性。
IF 3.8 Q1 Medicine Pub Date : 2022-03-14 DOI: 10.1042/ETLS20210229
Cawa Tran

Many different microorganisms associate with the coral host in a single entity known as the holobiont, and their interactions with the host contribute to coral health, thereby making them a fundamental part of reef function, survival, and conservation. As corals continue to be susceptible to bleaching due to environmental stress, coral-associated bacteria may have a potential role in alleviating bleaching. This review provides a synthesis of the various roles bacteria have in coral physiology and development, and explores the possibility that changes in the microbiome with environmental stress could have major implications in how corals acclimatize and survive. Recent studies on the interactions between the coral's algal and bacterial symbionts elucidate how bacteria may stabilize algal health and, therefore, mitigate bleaching. A summary of the innovative tools and experiments to examine host-microbe interactions in other cnidarians (a temperate coral, a jellyfish, two anemones, and a freshwater hydroid) is offered in this review to delineate our current knowledge of mechanisms underlying microbial establishment and maintenance in the animal host. A better understanding of these mechanisms may enhance the success of maintaining probiotics long-term in corals as a conservation strategy.

许多不同的微生物与珊瑚宿主结合成一个单一的实体,称为全息生物,它们与宿主的相互作用有助于珊瑚健康,从而使它们成为珊瑚礁功能、生存和保护的基本组成部分。由于珊瑚在环境压力下容易白化,与珊瑚有关的细菌可能对减轻白化有潜在的作用。本文综述了细菌在珊瑚生理和发育中的各种作用,并探讨了环境胁迫下微生物组变化可能对珊瑚适应和生存产生重大影响的可能性。最近关于珊瑚的藻类和细菌共生体之间相互作用的研究阐明了细菌如何稳定藻类的健康,从而减轻白化。本文综述了用于研究其他刺胞动物(一种温带珊瑚、一种水母、两种海葵和一种淡水水生生物)中宿主-微生物相互作用的创新工具和实验,以描述我们目前对动物宿主中微生物建立和维持机制的了解。更好地了解这些机制可能会提高作为保护策略在珊瑚中长期维持益生菌的成功。
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引用次数: 1
Horizon scan of rapidly advancing coral restoration approaches for 21st century reef management. 21世纪珊瑚礁管理中快速推进的珊瑚恢复方法的水平扫描。
IF 3.8 Q1 Medicine Pub Date : 2022-03-14 DOI: 10.1042/ETLS20210240
David J Suggett, Madeleine J H van Oppen

Coral reef restoration activity is accelerating worldwide in efforts to offset the rate of reef health declines. Many advances have already been made in restoration practices centred on coral biology (coral restoration), and particularly those that look to employ the high adaptive state and capacity of corals in order to ensure that efforts rebuilding coral biomass also equip reefs with enhanced resilience to future stress. We horizon scan the state-of-play for the many coral restoration innovations already underway across the complex life cycle for corals that spans both asexual and sexual reproduction - assisted evolution (manipulations targeted to the coral host and host-associated microbes), biobanking, as well as scalable coral propagation and planting - and how these innovations are in different stages of maturity to support new 21st century reef management frameworks. Realising the potential for coral restoration tools as management aids undoubtedly rests on validating different approaches as their application continues to scale. Whilst the ecosystem service responses to increased scaling still largely remain to be seen, coral restoration has already delivered immense new understanding of coral and coral-associated microbial biology that has long lagged behind advances in other reef sciences.

全球范围内的珊瑚礁恢复活动正在加速,以抵消珊瑚礁健康状况下降的速度。在以珊瑚生物学(珊瑚恢复)为中心的恢复实践方面已经取得了许多进展,特别是那些寻求利用珊瑚的高适应状态和能力,以确保重建珊瑚生物量的努力也使珊瑚礁具备增强的对未来压力的恢复能力的做法。我们对许多珊瑚恢复创新的现状进行了水平扫描,这些创新已经在珊瑚的复杂生命周期中进行,包括无性繁殖和有性繁殖,辅助进化(针对珊瑚宿主和宿主相关微生物的操作),生物银行,以及可扩展的珊瑚繁殖和种植,以及这些创新如何处于不同的成熟阶段,以支持新的21世纪珊瑚礁管理框架。毫无疑问,实现珊瑚恢复工具作为管理辅助工具的潜力取决于随着它们的应用继续扩大,对不同方法的验证。虽然生态系统服务对不断增加的水垢的反应在很大程度上仍有待观察,但珊瑚恢复已经带来了对珊瑚和珊瑚相关微生物生物学的巨大新认识,这些认识长期落后于其他珊瑚礁科学的进展。
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引用次数: 12
Regime shifts on tropical coral reef ecosystems: future trajectories to animal-dominated states in response to anthropogenic stressors. 热带珊瑚礁生态系统的制度转变:人类压力源下动物主导状态的未来轨迹。
IF 3.8 Q1 Medicine Pub Date : 2022-03-14 DOI: 10.1042/ETLS20210231
James J Bell, Valerio Micaroni, Francesca Strano

Despite the global focus on the occurrence of regime shifts on shallow-water tropical coral reefs over the last two decades, most of this research continues to focus on changes to algal-dominated states. Here, we review recent reports (in approximately the last decade) of regime shifts to states dominated by animal groups other than zooxanthellate Scleractinian corals. We found that while there have been new reports of regime shifts to reefs dominated by Ascidacea, Porifera, Octocorallia, Zoantharia, Actiniaria and azooxanthellate Scleractinian corals, some of these changes occurred many decades ago, but have only just been reported in the literature. In most cases, these reports are over small to medium spatial scales (<4 × 104 m2 and 4 × 104 to 2 × 106 m2, respectively). Importantly, from the few studies where we were able to collect information on the persistence of the regime shifts, we determined that these non-scleractinian states are generally unstable, with further changes since the original regime shift. However, these changes were not generally back to coral dominance. While there has been some research to understand how sponge- and octocoral-dominated systems may function, there is still limited information on what ecosystem services have been disrupted or lost as a result of these shifts. Given that many coral reefs across the world are on the edge of tipping points due to increasing anthropogenic stress, we urgently need to understand the consequences of non-algal coral reef regime shifts.

尽管在过去的二十年里,全球都在关注浅水热带珊瑚礁的状态变化,但大多数研究仍然集中在藻类主导状态的变化上。在这里,我们回顾了最近的报告(大约在过去的十年中),政权转移到由动物种群主导的状态,而不是虫黄藻核珊瑚。我们发现,虽然有新的报道称,珊瑚礁的政权转变以Ascidacea、Porifera、Octocorallia、Zoantharia、Actiniaria和azooxanthellate sccleractinian珊瑚为主,但其中一些变化发生在几十年前,只是刚刚在文献中报道过。在大多数情况下,这些报告是在小到中等空间尺度(
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引用次数: 8
Microplastics: impacts on corals and other reef organisms. 微塑料:对珊瑚和其他珊瑚礁生物的影响。
IF 3.8 Q1 Medicine Pub Date : 2022-03-14 DOI: 10.1042/ETLS20210236
Olga Pantos

Plastic pollution in a growing problem globally. In addition to the continuous flow of plastic particles to the environment from direct sources, and through the natural wear and tear of items, the plastics that are already there have the potential to breakdown further and therefore provide an immense source of plastic particles. With the continued rise in levels of plastic production, and consequently increasing levels entering our marine environments it is imperative that we understand its impacts. There is evidence microplastic and nanoplastic (MNP) pose a serious threat to all the world's marine ecosystems and biota, across all taxa and trophic levels, having individual- to ecosystem-level impacts, although these impacts are not fully understood. Microplastics (MPs; 0.1-5 mm) have been consistently found associated with the biota, water and sediments of all coral reefs studied, but due to limitations in the current techniques, a knowledge gap exists for the level of nanoplastic (NP; <1 µm). This is of particular concern as it is this size fraction that is thought to pose the greatest risk due to their ability to translocate into different organs and across cell membranes. Furthermore, few studies have examined the interactions of MNP exposure and other anthropogenic stressors such as ocean acidification and rising temperature. To support the decision-making required to protect these ecosystems, an advancement in standardised methods for the assessment of both MP and NPs is essential. This knowledge, and that of predicted levels can then be used to determine potential impacts more accurately.

塑料污染是一个日益严重的全球性问题。除了塑料颗粒从直接来源和通过物品的自然磨损不断流入环境之外,已经存在的塑料有可能进一步分解,因此提供了巨大的塑料颗粒来源。随着塑料生产水平的持续上升,进入海洋环境的塑料含量也随之增加,我们必须了解其影响。有证据表明,微塑料和纳米塑料(MNP)对世界上所有的海洋生态系统和生物群构成了严重威胁,对所有分类群和营养水平产生了个体到生态系统的影响,尽管这些影响尚未完全了解。塑料微粒(议员;0.1-5毫米)一直被发现与所研究的所有珊瑚礁的生物群,水和沉积物有关,但由于当前技术的局限性,纳米塑料(NP;
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引用次数: 5
Will coral reefs survive by adaptive bleaching? 珊瑚礁会因适应性白化而存活吗?
IF 3.8 Q1 Medicine Pub Date : 2022-03-14 DOI: 10.1042/ETLS20210227
Ross Cunning

Some reef-building corals form symbioses with multiple algal partners that differ in ecologically important traits like heat tolerance. Coral bleaching and recovery can drive symbiont community turnover toward more heat-tolerant partners, and this 'adaptive bleaching' response can increase future bleaching thresholds by 1-2°C, aiding survival in warming oceans. However, this mechanism of rapid acclimatization only occurs in corals that are compatible with multiple symbionts, and only when the disturbance regime and competitive dynamics among symbionts are sufficient to bring about community turnover. The full scope of coral taxa and ecological scenarios in which symbiont shuffling occurs remains poorly understood, though its prevalence is likely to increase as warming oceans boost the competitive advantage of heat-tolerant symbionts, increase the frequency of bleaching events, and strengthen metacommunity feedbacks. Still, the constraints, limitations, and potential tradeoffs of symbiont shuffling suggest it will not save coral reef ecosystems; however, it may significantly improve the survival trajectories of some, or perhaps many, coral species. Interventions to manipulate coral symbionts and symbiont communities may expand the scope of their adaptive potential, which may boost coral survival until climate change is addressed.

一些造礁珊瑚与多种藻类伙伴形成共生关系,这些藻类在生态上重要的特征(如耐热性)上有所不同。珊瑚白化和恢复可以推动共生群落向更耐热的伙伴转变,这种“适应性白化”反应可以将未来的白化阈值提高1-2°C,有助于在变暖的海洋中生存。然而,这种快速适应机制只发生在与多个共生体相容的珊瑚中,并且只有当共生体之间的干扰制度和竞争动态足以导致群落更替时才会发生。尽管随着海洋变暖增强了耐热共生体的竞争优势,增加了漂白事件的频率,并加强了元群落反馈,但人们对共生洗牌发生的珊瑚分类群和生态情景的全部范围仍知之甚少,但洗牌的普遍程度可能会增加。尽管如此,共生洗牌的约束、限制和潜在的权衡表明,它不会拯救珊瑚礁生态系统;然而,它可能会显著改善一些或许多珊瑚物种的生存轨迹。操纵珊瑚共生体和共生体群落的干预措施可能会扩大其适应潜力的范围,这可能会促进珊瑚的生存,直到气候变化得到解决。
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引用次数: 1
Emerging insights on effects of sharks and other top predators on coral reefs 关于鲨鱼和其他顶级捕食者对珊瑚礁影响的新见解
IF 3.8 Q1 Medicine Pub Date : 2022-03-08 DOI: 10.1042/ETLS20210238
S. Sandin, Beverly French, B. Zgliczynski
Predation is ubiquitous on coral reefs. Among the most charismatic group of reef predators are the top predatory fishes, including sharks and large-bodied bony fishes. Despite the threat presented by top predators, data describing their realized effects on reef community structure and functioning are challenging to produce. Many innovative studies have capitalized on natural experimental conditions to explore predator effects on reefs. Gradients in predator density have been created by spatial patterning of fisheries management. Evidence of prey release has been observed across some reefs, namely that potential prey increase in density when predator density is reduced. While such studies search for evidence of prey release among broad groups or guilds of potential prey, a subset of studies have sought evidence of release at finer population levels. We find that some groups of fishes are particularly vulnerable to the effects of predators and more able to capitalize demographically when predator density is reduced. For example, territorial damselfish appear to realize reliable population expansion with the reduction in predator density, likely because their aggressive, defensive behavior makes them distinctly vulnerable to predation. Relatedly, individual fishes that suffer from debilitating conditions, such as heavy parasite loads, appear to realize relatively stronger levels of prey release with reduced predator density. Studying the effects of predators on coral reefs remains a timely pursuit, and we argue that efforts to focus on the specifics of vulnerability to predation among potential prey and other context-specific dimensions of mortality hold promise to expand our knowledge.
珊瑚礁上到处都是捕食者。在最具魅力的珊瑚礁捕食者群体中,包括鲨鱼和大型硬骨鱼在内的顶级掠食性鱼类。尽管顶级捕食者带来了威胁,但描述它们对珊瑚礁群落结构和功能的实际影响的数据仍具有挑战性。许多创新研究利用自然实验条件来探索捕食者对珊瑚礁的影响。渔业管理的空间格局造成了捕食者密度的梯度。在一些珊瑚礁上观察到猎物释放的证据,即当捕食者密度减少时,潜在猎物的密度增加。虽然这些研究在广泛的潜在猎物群体或行会中寻找猎物释放的证据,但有一部分研究在更精细的种群水平上寻找猎物释放的证据。我们发现,某些鱼类群体特别容易受到捕食者的影响,当捕食者密度降低时,它们更能在人口上发挥作用。例如,领地雀鲷似乎随着捕食者密度的减少而实现了可靠的种群扩张,这可能是因为它们的攻击性和防御性行为使它们明显容易受到捕食者的攻击。与此相关的是,个体鱼类遭受衰弱的条件,如寄生虫的沉重负荷,似乎实现了相对较强的猎物释放水平,减少了捕食者的密度。研究捕食者对珊瑚礁的影响仍然是一个及时的追求,我们认为,努力关注潜在猎物中对捕食者的脆弱性的具体细节和其他特定环境的死亡率维度有望扩大我们的知识。
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引用次数: 1
Multi-omics strategies for personalized and predictive medicine: past, current, and future translational opportunities. 个性化和预测医学的多组学策略:过去,现在和未来的转化机会。
IF 3.8 Q1 Medicine Pub Date : 2022-03-02 DOI: 10.1042/ETLS20210244
Zeeshan Ahmed
Precision medicine is driven by the paradigm shift of empowering clinicians to predict the most appropriate course of action for patients with complex diseases and improve routine medical and public health practice. It promotes integrating collective and individualized clinical data with patient specific multi-omics data to develop therapeutic strategies, and knowledgebase for predictive and personalized medicine in diverse populations. This study is based on the hypothesis that understanding patient's metabolomics and genetic make-up in conjunction with clinical data will significantly lead to determining predisposition, diagnostic, prognostic and predictive biomarkers and optimal paths providing personalized care for diverse and targeted chronic, acute, and infectious diseases. This study briefs emerging significant, and recently reported multi-omics and translational approaches aimed to facilitate implementation of precision medicine. Furthermore, it discusses current grand challenges, and the future need of Findable, Accessible, Intelligent, and Reproducible (FAIR) approach to accelerate diagnostic and preventive care delivery strategies beyond traditional symptom-driven, disease-causal medical practice.
精准医学是由授权临床医生预测复杂疾病患者最合适的行动方案并改进常规医疗和公共卫生实践的范式转变驱动的。它促进将集体和个性化的临床数据与患者特异性的多组学数据相结合,以制定治疗策略,并为不同人群的预测性和个性化医学建立知识库。这项研究基于这样一种假设,即结合临床数据了解患者的代谢组学和基因构成将大大有助于确定易感性、诊断、预后和预测性生物标志物,以及为各种有针对性的慢性病、急性病和传染病提供个性化护理的最佳途径。这项研究简要介绍了最近报道的旨在促进精准医学实施的多组学和转化方法。此外,它还讨论了当前的巨大挑战,以及可查找、可访问、智能和可复制(FAIR)方法的未来需求,以加速诊断和预防性护理提供策略,超越传统的症状驱动、疾病因果医疗实践。
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引用次数: 5
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