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The ecological impact of plastic pollution in a changing climate. 塑料污染在气候变化中的生态影响。
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-01 DOI: 10.1042/ETLS20220016
Gawsia Wahidunnessa Chowdhury, Heather J Koldewey, Md Nazmul Hasan Niloy, Subrata Sarker

Assessing three interlinked issues, plastic pollution, climate change and biodiversity loss separately can overlook potential interactions that may lead to positive or negative impacts on global ecosystem processes. Recent studies suggest that threatened species and ecosystems are vulnerable to both plastic pollution and climate change stressors. Here we consider the connectivity and state of knowledge between these three environmental issues with a focus on the Global South. Nine out of top ten Long-Term Climate Risk Index (CRI) (2000-2019) ranked countries are located within the Global South, yet research is focused in the Global North. A literature search for the top ten Long-Term Climate Risk Index (CRI) (2000-2019) ranked countries matched a total of 2416 (3.3% of global publications) search results on climate change, with 56 (4% of the global publications) on plastic pollution, and seven (7.7% of the global publications) on both climate change and plastic pollution. There is a strong correlation between the Global South and high biodiversity hotspots, high food insecurity and low environmental performance. Using Bangladesh as a case study, we show the erosion rates and sea level rise scenarios that will increase ocean-bound plastic pollution and impact high biodiversity areas. Poverty alleviation and promoting renewable energy and green practices can significantly reduce the stress on the environment. We recommend that these connected planetary threats can be best addressed through a holistic and collaborative approach to research, a focus on the Global South, and an ambitious policy agenda.

单独评估塑料污染、气候变化和生物多样性丧失这三个相互关联的问题,可能会忽略可能对全球生态系统过程产生积极或消极影响的潜在相互作用。最近的研究表明,受威胁的物种和生态系统容易受到塑料污染和气候变化压力的影响。在这里,我们以全球南方为重点,考虑这三个环境问题之间的联系和知识状况。在长期气候风险指数(CRI)(2000-2019)排名前十的国家中,有九个位于全球南方,但研究的重点是全球北方。对排名前10位的长期气候风险指数(CRI)(2000-2019)国家的文献检索发现,共有2416个(占全球出版物的3.3%)关于气候变化的搜索结果相匹配,其中56个(占全球出版物的4%)关于塑料污染,7个(占全球出版物的7.7%)关于气候变化和塑料污染。全球南方与高生物多样性热点、高粮食不安全和低环境绩效之间存在很强的相关性。以孟加拉国为例,我们展示了侵蚀率和海平面上升的情景,这些情景将增加海洋塑料污染并影响生物多样性高的地区。减轻贫困和促进可再生能源和绿色做法可以大大减少对环境的压力。我们建议,要解决这些相互关联的地球威胁,最好的办法是采取全面合作的研究方法,关注全球南方,制定雄心勃勃的政策议程。
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引用次数: 3
Plastic pollution of four understudied marine ecosystems: a review of mangroves, seagrass meadows, the Arctic Ocean and the deep seafloor. 四种研究不足的海洋生态系统的塑料污染:红树林、海草草甸、北冰洋和深海海底综述。
IF 3.4 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-01 DOI: 10.1042/ETLS20220017
Bruno Andreas Walther, Melanie Bergmann

Plastic pollution is now a worldwide phenomenon affecting all marine ecosystems, but some ecosystems and regions remain understudied. Here, we review the presence and impacts of macroplastics and microplastics for four such ecosystems: mangroves, seagrass meadows, the Arctic Ocean and the deep seafloor. Plastic production has grown steadily, and thus the impact on species and ecosystems has increased, too. The accumulated evidence also indicates that plastic pollution is an additional and increasing stressor to these already ecosystems and many of the species living in them. However, laboratory or field studies, which provide strong correlational or experimental evidence of ecological harm due to plastic pollution remain scarce or absent for these ecosystems. Based on these findings, we give some research recommendations for the future.

塑料污染现已成为影响所有海洋生态系统的世界性现象,但对某些生态系统和区域的研究仍然不足。在此,我们回顾了红树林、海草草甸、北冰洋和深海海底这四个生态系统中存在的大塑料和微塑料及其影响。塑料产量稳步增长,因此对物种和生态系统的影响也随之增加。积累的证据还表明,塑料污染对这些生态系统和生活在其中的许多物种造成了额外的、日益严重的压力。然而,对于这些生态系统来说,能够提供塑料污染对生态造成危害的有力相关或实验证据的实验室或实地研究仍然很少或根本没有。基于这些发现,我们对未来的研究提出了一些建议。
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引用次数: 0
Exploring protein symmetry at the RCSB Protein Data Bank. 在RCSB蛋白质数据库中探索蛋白质对称性。
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-09-09 DOI: 10.1042/ETLS20210267
Jose M Duarte, Shuchismita Dutta, David S Goodsell, Stephen K Burley

The symmetry of biological molecules has fascinated structural biologists ever since the structure of hemoglobin was determined. The Protein Data Bank (PDB) archive is the central global archive of three-dimensional (3D), atomic-level structures of biomolecules, providing open access to the results of structural biology research with no limitations on usage. Roughly 40% of the structures in the archive exhibit some type of symmetry, including formal global symmetry, local symmetry, or pseudosymmetry. The Research Collaboratory for Structural Bioinformatics (RCSB) Protein Data Bank (founding member of the Worldwide Protein Data Bank partnership that jointly manages, curates, and disseminates the archive) provides a variety of tools to assist users interested in exploring the symmetry of biological macromolecules. These tools include multiple modalities for searching and browsing the archive, turnkey methods for biomolecular visualization, documentation, and outreach materials for exploring functional biomolecular symmetry.

自从确定了血红蛋白的结构以来,生物分子的对称性就一直吸引着结构生物学家。蛋白质数据库(PDB)档案是生物分子三维(3D)原子水平结构的中央全球档案,提供对结构生物学研究结果的开放访问,没有使用限制。档案中大约40%的结构表现出某种形式的对称,包括形式的全局对称、局部对称或伪对称。结构生物信息学研究合作实验室(RCSB)蛋白质数据库(全球蛋白质数据库合作伙伴关系的创始成员,共同管理,策划和传播档案)提供各种工具,以帮助有兴趣探索生物大分子对称性的用户。这些工具包括用于搜索和浏览档案的多种模式,用于生物分子可视化的交钥匙方法,用于探索功能性生物分子对称性的文档和外联材料。
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引用次数: 3
Floral symmetry: the geometry of plant reproduction. 花对称:植物繁殖的几何学。
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-09-09 DOI: 10.1042/ETLS20210270
Yuxiang Jiang, Laila Moubayidin

The flower is an astonishing innovation that arose during plant evolution allowing flowering plants - also known as angiosperms - to dominate life on earth in a relatively short period of geological time. Flowers are formed from secondary meristems by co-ordinated differentiation of flower organs, such as sepals, petals, stamens, and carpels. The position, number and morphology of these flower organs impose a geometrical pattern - or symmetry type - within the flower which is a trait tightly connected to successful reproduction. During evolution, flower symmetry switched from the ancestral poly-symmetric (radial symmetry) to the mono-symmetric (bilateral symmetry) type multiple times, including numerous reversals, with these events linked to co-evolution with pollinators and reproductive strategies. In this review, we introduce the diversity of flower symmetry, trace its evolution in angiosperms, and highlight the conserved genetic basis underpinning symmetry control in flowers. Finally, we discuss the importance of building upon the concept of flower symmetry by looking at the mechanisms orchestrating symmetry within individual flower organs and summarise the current scenario on symmetry patterning of the female reproductive organ, the gynoecium, the ultimate flower structure presiding over fertilisation and seed production.

花是植物进化过程中出现的一种惊人的创新,它使开花植物——也被称为被子植物——在相对较短的地质时间内主宰了地球上的生命。花由次生分生组织形成,通过花器官的协调分化,如萼片、花瓣、雄蕊和心皮。这些花器官的位置、数量和形态决定了花内部的几何模式或对称类型,这是与成功繁殖密切相关的特征。在进化过程中,花的对称从祖先的多对称(径向对称)多次转变为单对称(双边对称)类型,包括多次逆转,这些事件与传粉者和生殖策略的共同进化有关。本文介绍了被子植物花对称的多样性,追溯了花对称在被子植物中的进化过程,并强调了花对称控制的保守遗传基础。最后,我们通过观察单个花器官内协调对称的机制来讨论建立花对称概念的重要性,并总结了目前关于雌性生殖器官雌蕊对称模式的情况,雌蕊是主导受精和种子产生的最终花结构。
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引用次数: 5
Developmental instability, fluctuating asymmetry, and human psychological science. 发展不稳定、波动不对称和人类心理科学。
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-09-09 DOI: 10.1042/ETLS20220025
Steven W Gangestad
Developmental instability (DI) is an individual's inability to produce a specific developmental outcome under a given set of conditions, generally thought to result from random perturbations experienced during development. Fluctuating asymmetry (FA) - asymmetry on bilateral features that, on average, are symmetrical (or asymmetry deviating from that arising from design) - has been used to measure DI. Dating to half a century ago, and accelerating in the past three decades, psychological researchers have examined associations between FA (typically measured on bodily or facial features) and a host of outcomes of interest, including psychological disorders, cognitive ability, attractiveness, and sexual behavior. A decade ago, a meta-analysis on findings from nearly 100 studies extracted several conclusions. On average, small but statistically reliable associations between FA and traits of interest exist. Though modest, these associations are expected to greatly underestimate the strength of associations with underlying DI. Despite the massive sample size across studies, we still lack a good handle on which traits are most strongly affected by DI. A major methodological implication of the meta-analysis is that most studies have been, individually, woefully underpowered to detect associations. Though offering some intriguing findings, much research is the past decade too has been underpowered; hence, the newer literature is also likely noisy. Several large-scale studies are exceptions. Future progress depends on additional large-scale studies and researchers' sensitivity to power issues. As well, theoretical assumptions and conceptualizations of DI and FA driving psychological research may need revision to explain empirical patterns.
发育不稳定(DI)是指个体在特定条件下无法产生特定的发育结果,通常被认为是由发育过程中经历的随机扰动造成的。波动不对称(FA) -双侧特征的不对称,平均而言,是对称的(或偏离设计的不对称)-已被用于测量DI。早在半个世纪前,心理学研究人员就研究了FA(通常通过身体或面部特征测量)与一系列感兴趣的结果之间的关系,包括心理障碍、认知能力、吸引力和性行为。十年前,一项对近100项研究结果的荟萃分析得出了几个结论。平均而言,FA和感兴趣的性状之间存在较小但统计可靠的关联。虽然这些关联不大,但预计会大大低估与潜在DI的关联强度。尽管研究的样本量很大,但我们仍然无法很好地处理哪些特征受DI的影响最大。荟萃分析的一个主要方法学含义是,大多数单独的研究在检测关联方面的能力严重不足。虽然提供了一些有趣的发现,但在过去的十年里,许多研究也一直缺乏动力;因此,较新的文献也可能是嘈杂的。一些大规模的研究是例外。未来的进展取决于更多的大规模研究和研究人员对电力问题的敏感性。此外,理论假设和概念的DI和FA驱动心理学研究可能需要修订,以解释经验模式。
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引用次数: 3
Anthropometric fluctuating asymmetries in living humans through the eyes of an anthropologist. 通过人类学家的视角观察活人的波动不对称。
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-09-09 DOI: 10.1042/ETLS20210276
Barış Özener

There are many environmental and genetic factors that disrupt the stable structure of development in organisms. Although the strength of these vary, they leave certain signs in the body structure. Fluctuating asymmetry is a widely used population-level index of developmental instability, developmental noise, and robustness. Many bilateral traits are used in fluctuating asymmetry studies in humans. These traits include dermatoglyphics, limb lengths and widths, bilateral facial characters, and teeth. In this review, I evaluate the measurement methods of many bilateral anthropometric characters, taken from the bodies of living individuals with classical digital calipers.

有许多环境和遗传因素会破坏生物发育的稳定结构。虽然它们的强度各不相同,但它们会在身体结构中留下某些迹象。波动不对称是一种广泛使用的种群水平发育不稳定性、发育噪声和稳健性指标。在人类波动不对称研究中使用了许多双侧特征。这些特征包括皮肤纹、肢体长度和宽度、两侧面部特征和牙齿。在这篇综述中,我评估了许多双侧人体测量特征的测量方法,取自活体个体的经典数字卡尺。
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引用次数: 2
Fluctuating asymmetry as an indicator of stress. 波动不对称作为压力的指示。
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-09-09 DOI: 10.1042/ETLS20210274
Vladimir M Zakharov, Ilya E Trofimov

Fluctuating asymmetry as a special kind of asymmetry can be defined as deviations from a known predetermined ratio of the parts of morphological structure under study. As a special type of phenotypic variability fluctuating asymmetry is a manifestation of ontogenetic noise or developmental variability. This type of variability is ubiquitous and plays a significant role in the observed phenotypic diversity. The level of fluctuating asymmetry turns out to be an indicator of optimal developmental conditions and genetic coadaptation. It is also considered as a parameter of fitness. Thus, fluctuating asymmetry acts as a measure of developmental stability in developmental biology and as a measure of population condition in population biology.

波动不对称是一种特殊的不对称,可以定义为所研究的形态结构部分偏离已知的预定比例。波动不对称是一种特殊的表型变异性,是个体发生噪声或发育变异性的表现。这种类型的变异是普遍存在的,在观察到的表型多样性中起着重要作用。波动不对称的水平被证明是最佳发育条件和遗传共同适应的一个指标。它也被认为是适应度的一个参数。因此,波动不对称在发育生物学中作为发育稳定性的衡量标准,在种群生物学中作为种群状况的衡量标准。
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引用次数: 8
Shape asymmetry - what's new? 形状不对称——有什么新鲜事吗?
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-09-09 DOI: 10.1042/ETLS20210273
Christian Peter Klingenberg

Studies of shape asymmetry have become increasingly abundant as the methods of geometric morphometrics have gained widespread use. Most of these studies have focussed on fluctuating asymmetry and have largely obtained similar results as more traditional analyses of asymmetry in distance measurements, but several notable differences have also emerged. A key difference is that shape analyses provide information on the patterns, not just the amount of variation, and therefore tend to be more sensitive. Such analyses have shown that apparently symmetric structures in animals consistently show directional asymmetry for shape, but not for size. Furthermore, the long-standing prediction that phenotypic plasticity in response to environmental heterogeneity can contribute to fluctuating asymmetry has been confirmed for the first time for the shape of flower parts (but not for size). Finally, shape analyses in structures with complex symmetry, such as many flowers, can distinguish multiple types of directional asymmetry, generated by distinct direction-giving factors, which combine to the single component observable in bilaterally symmetric structures. While analyses of shape asymmetry are broadly compatible with traditional analyses of asymmetry, they incorporate more detailed morphological information, particularly for structures with complex symmetry, and therefore can reveal subtle biological effects that would otherwise not be apparent. This makes them a promising tool for a wide range of studies in the basic and applied life sciences.

随着几何形态计量学方法的广泛应用,对形状不对称的研究日益丰富。这些研究大多集中于波动不对称,并在很大程度上获得了与更传统的距离测量不对称分析相似的结果,但也出现了一些显著的差异。一个关键的区别是,形状分析提供了关于图案的信息,而不仅仅是变化的数量,因此往往更敏感。这些分析表明,动物表面上对称的结构在形状上始终表现出方向上的不对称,但在大小上却并非如此。此外,长期以来的预测,即对环境异质性的表型可塑性可能导致波动不对称,这一预测首次在花的形状(但不是大小)上得到证实。最后,对具有复杂对称性的结构(如许多花)进行形状分析,可以区分由不同的方向赋予因素产生的多种类型的方向不对称,这些因素结合到双边对称结构中可观察到的单一成分。虽然形状不对称的分析与传统的不对称分析大体一致,但它们包含了更详细的形态信息,特别是对于具有复杂对称性的结构,因此可以揭示微妙的生物效应,否则这些效应不会很明显。这使得它们在基础和应用生命科学的广泛研究中成为一个有前途的工具。
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引用次数: 3
Spatial patterns in ecological systems: from microbial colonies to landscapes. 生态系统的空间格局:从微生物群落到景观。
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-06-09 DOI: 10.1042/ETLS20210282
R. Martínez-García, C. Tarnita, J. A. Bonachela
Self-organized spatial patterns are ubiquitous in ecological systems and allow populations to adopt non-trivial spatial distributions starting from disordered configurations. These patterns form due to diverse nonlinear interactions among organisms and between organisms and their environment, and lead to the emergence of new (eco)system-level properties unique to self-organized systems. Such pattern consequences include higher resilience and resistance to environmental changes, abrupt ecosystem collapse, hysteresis loops, and reversal of competitive exclusion. Here, we review ecological systems exhibiting self-organized patterns. We establish two broad pattern categories depending on whether the self-organizing process is primarily driven by nonlinear density-dependent demographic rates or by nonlinear density-dependent movement. Using this organization, we examine a wide range of observational scales, from microbial colonies to whole ecosystems, and discuss the mechanisms hypothesized to underlie observed patterns and their system-level consequences. For each example, we review both the empirical evidence and the existing theoretical frameworks developed to identify the causes and consequences of patterning. Finally, we trace qualitative similarities across systems and propose possible ways of developing a more quantitative understanding of how self-organization operates across systems and observational scales in ecology.
自组织空间模式在生态系统中普遍存在,并允许种群从无序配置开始采用非平凡的空间分布。这些模式是由于生物体之间以及生物体与其环境之间的各种非线性相互作用而形成的,并导致自组织系统特有的新的(生态)系统级特性的出现。这种模式的后果包括对环境变化的更高弹性和抵抗力、生态系统的突然崩溃、滞后循环和竞争排斥的逆转。在这里,我们回顾了表现出自组织模式的生态系统。我们建立了两个广泛的模式类别,这取决于自组织过程主要是由非线性密度相关的人口统计率驱动还是由非线性密度依赖的运动驱动。利用这个组织,我们研究了从微生物群落到整个生态系统的广泛观测尺度,并讨论了假设为观测模式基础的机制及其系统级后果。对于每一个例子,我们都会回顾经验证据和现有的理论框架,以确定模式形成的原因和后果。最后,我们追踪了不同系统之间的定性相似性,并提出了可能的方法来发展对自组织如何在生态学中跨系统和观测尺度运行的更定量的理解。
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引用次数: 7
God playing dice, revisited: determinism and indeterminism in studies of stochastic phenotypic variation. 上帝在玩骰子,重访:随机表型变异研究中的决定论和不确定性。
IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-05-27 DOI: 10.1042/ETLS20210285
D. Lajus
Empirical studies of phenotypic variation show that genetic and environmental heterogeneity account for only part of it. Usually, the magnitude of the residual variation is comparable with that of the genetic component, while notably exceeding the magnitude of the environmental component. This can be interpreted in two ways. A deterministic interpretation associates it with artifacts such as measurement error and genetic and environmental heterogeneity that is unaccounted for. An indeterministic interpretation argues that it is random or stochastic phenotypic variation (SPV) resulting from developmental instability - a developing organism's inability to produce a consistent phenotype in a given environment. Classical example of debates between determinists and indeterminists took place about a century ago in quantum physics. In discussing Heidelberg's Uncertainty Principle, Einstein metaphorically expressed his deterministic position: 'God does not play dice with universe'. The indeterministic Uncertainty Principle, however, was eventually widely accepted. Currently, most biologists implicitly or explicitly support deterministic interpretations of phenotypic variation patterns. Here, a wide range of data on morphological traits (studied with analysis of fluctuating asymmetry) and non-morphological traits are analyzed to provide evidence that SPV is not an artifact, but a valid phenomenon. This evidence supports conclusions that observed associations between SPV and stress can be analyzed in the framework of dynamic energy budget theory, and are inextricably linked through energy homeostasis.
表型变异的实证研究表明,遗传和环境异质性只占其中的一部分。通常,残余变异的大小与遗传成分的大小相当,但明显超过环境成分的大小。这可以用两种方式来解释。确定性解释将其与测量误差、遗传和环境异质性等未知因素联系起来。一种不确定性的解释认为,这是由发育不稳定引起的随机或随机表型变异(SPV),即发育中的生物体在给定环境中无法产生一致的表型。决定论者和不确定论者之间争论的经典例子发生在大约一个世纪前的量子物理学中。在讨论海德堡的不确定性原理时,爱因斯坦隐喻性地表达了他的确定性立场:“上帝不会和宇宙玩骰子”。然而,不确定性原则最终被广泛接受。目前,大多数生物学家含蓄或明确地支持表型变异模式的确定性解释。在这里,分析了大量关于形态特征(通过波动不对称性分析进行研究)和非形态特征的数据,以提供证据,证明SPV不是一种假象,而是一种有效的现象。这一证据支持了这样的结论,即观察到的SPV和压力之间的关联可以在动态能量预算理论的框架下进行分析,并且通过能量稳态密不可分。
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引用次数: 2
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Emerging Topics in Life Sciences
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