This review focuses on current challenges associated with the study and standardization of chitosan, a promising biopolymer for medical applications. Its key properties, such as biodegradability, low toxicity, mucoadhesion, and antimicrobial effects, make it highly sought in various fields of medicine. Particular attention is given to the analysis of chitosan parameters, including molecular weight, degree of deacetylation, and pattern of acetylation, as well as compliance with pharmacopoeial requirements. The challenges associated with the reproducibility of chitosan properties and the absence of uniform analytical standards are addressed. The review also summarized the data on the relationship between the chitosan structural characteristics and biological activity (antimicrobial, antioxidant, immunomodulatory, etc.), which is important for predicting its behavior in biological systems. Regulatory considerations governing the medical use of chitosan and prospects for its introduction into medical practice are examined. This review will be useful for researchers engaged in the development, characterization, and standardization of chitosan-based biomaterials.
{"title":"A Critical View at the Analysis of Chitosan Characteristics: Towards Biomedical Application","authors":"Balzhima Shagdarova, Alexey Lunkov, Yuliya Zhuikova, Sergey Lopatin, Alla Il’ina, Valery Varlamov","doi":"10.1134/S0006297925603831","DOIUrl":"10.1134/S0006297925603831","url":null,"abstract":"<p>This review focuses on current challenges associated with the study and standardization of chitosan, a promising biopolymer for medical applications. Its key properties, such as biodegradability, low toxicity, mucoadhesion, and antimicrobial effects, make it highly sought in various fields of medicine. Particular attention is given to the analysis of chitosan parameters, including molecular weight, degree of deacetylation, and pattern of acetylation, as well as compliance with pharmacopoeial requirements. The challenges associated with the reproducibility of chitosan properties and the absence of uniform analytical standards are addressed. The review also summarized the data on the relationship between the chitosan structural characteristics and biological activity (antimicrobial, antioxidant, immunomodulatory, etc.), which is important for predicting its behavior in biological systems. Regulatory considerations governing the medical use of chitosan and prospects for its introduction into medical practice are examined. This review will be useful for researchers engaged in the development, characterization, and standardization of chitosan-based biomaterials.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S193 - S224"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336927","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S000629792560406X
Ekaterina Yu. Epova, Elena V. Trubnikova, Nikita G. Yabbarov, Elena D. Nikolskaya, Maksim A. Klimenko, Margarita V. Chirkina, Mariia R. Mollaeva, Maria B. Sokol, Ilya N. Kurochkin
Proteins that bind components of bacterial cell wall play a key role in innate immunity and interactions between bacteria and host organisms. They participate in the control of peptidoglycan synthesis and degradation, determine the pathogenic specificity of bacteria, affect their ability to adhere and invade, and serve as important elements of molecular recognition. The review discusses proteins of diverse origins and their recombinant analogues, their structure and binding mechanisms, and prospects for application in the diagnostics of bacterial infections and functionalization of nanomaterials.
{"title":"Application of Proteins Binding Components of Bacterial Cell Wall for Extraction, Concentration, and Analysis of Biological Samples","authors":"Ekaterina Yu. Epova, Elena V. Trubnikova, Nikita G. Yabbarov, Elena D. Nikolskaya, Maksim A. Klimenko, Margarita V. Chirkina, Mariia R. Mollaeva, Maria B. Sokol, Ilya N. Kurochkin","doi":"10.1134/S000629792560406X","DOIUrl":"10.1134/S000629792560406X","url":null,"abstract":"<p>Proteins that bind components of bacterial cell wall play a key role in innate immunity and interactions between bacteria and host organisms. They participate in the control of peptidoglycan synthesis and degradation, determine the pathogenic specificity of bacteria, affect their ability to adhere and invade, and serve as important elements of molecular recognition. The review discusses proteins of diverse origins and their recombinant analogues, their structure and binding mechanisms, and prospects for application in the diagnostics of bacterial infections and functionalization of nanomaterials.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S133 - S162"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336932","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S0006297925604265
Alexander V. Zubkov, Ludmila G. Butova
The TPO gene belongs to the group of genes responsible for the biosynthesis of thyroid hormones and encodes thyroid peroxidase, a key enzyme involved in this process. Mutations in these genes can result in thyroid dysfunction characterized by reduced levels of thyroid hormones. Hypothyroidism caused by TPO pathogenic variants typically presents as permanent hypothyroidism and is frequently associated with endemic goiter. This analytical review summarizes and systematizes data from the studies conducted in different regions of the world on mutations identified in the TPO gene in patients with hypothyroidism. Particular attention is given to mutations within structural and functional domains of thyroid peroxidase, which has a unique molecular architecture within its family.
{"title":"Thyroid Peroxidase Gene Mutations Associated with Thyroid Disorders","authors":"Alexander V. Zubkov, Ludmila G. Butova","doi":"10.1134/S0006297925604265","DOIUrl":"10.1134/S0006297925604265","url":null,"abstract":"<p>The <i>TPO</i> gene belongs to the group of genes responsible for the biosynthesis of thyroid hormones and encodes thyroid peroxidase, a key enzyme involved in this process. Mutations in these genes can result in thyroid dysfunction characterized by reduced levels of thyroid hormones. Hypothyroidism caused by <i>TPO</i> pathogenic variants typically presents as permanent hypothyroidism and is frequently associated with endemic goiter. This analytical review summarizes and systematizes data from the studies conducted in different regions of the world on mutations identified in the <i>TPO</i> gene in patients with hypothyroidism. Particular attention is given to mutations within structural and functional domains of thyroid peroxidase, which has a unique molecular architecture within its family.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S394 - S418"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336933","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S0006297925603764
Yulia S. Panina, Sergey A. Bruskin, Svetlana O. Avdoshina, Liliya G. Maloshenok, Tigran Yuzbashev, Evgeniya Yuzbasheva
This article reviews biosynthesis of the valuable fat-soluble compounds with antioxidant activity, in particular vitamin E isomers and carotenoids, in yeast cells. Main genetic engineering approaches to increase microbial production of these substances are described. The main innovative strategies for subcellular separation of synthesis, storage, and recovery of lipophilic compounds are discussed, and examples of cell morphology engineering importance of are shown.
{"title":"Yeast Engineering for Antioxidant Production","authors":"Yulia S. Panina, Sergey A. Bruskin, Svetlana O. Avdoshina, Liliya G. Maloshenok, Tigran Yuzbashev, Evgeniya Yuzbasheva","doi":"10.1134/S0006297925603764","DOIUrl":"10.1134/S0006297925603764","url":null,"abstract":"<p>This article reviews biosynthesis of the valuable fat-soluble compounds with antioxidant activity, in particular vitamin E isomers and carotenoids, in yeast cells. Main genetic engineering approaches to increase microbial production of these substances are described. The main innovative strategies for subcellular separation of synthesis, storage, and recovery of lipophilic compounds are discussed, and examples of cell morphology engineering importance of are shown.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S98 - S117"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336899","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S0006297925604113
Natalia V. Rassomakhina, Astemir R. Likhov, Daria R. Shisterova, Ulyana A. Apukhtina, Veronika N. Volodina, Igor O. Gritskov, Gevorg R. Kasyan, Viktoriya V. Zherdeva
In recent years, reconstructive surgery strategies have been supplemented with innovative approaches aimed at developing tissue-engineered structures using autologous tissues and biodegradable scaffolds and matrices, the purpose of which is to reduce the risk of postoperative complications, on the one hand, while ensuring accelerated restoration of the structure and functions of organs, on the other hand. The review systematizes modern scientific trends in the field of tissue engineering of the urethra, focused on creation of biocompatible and functionally active tissue-engineered structures using achievements of cellular technologies and materials science. Particular attention is paid to describing the mechanisms and ways of forming a complete and functional three-dimensional structure of the urethra, including the use of organoids. It is expected that this strategy will contribute to the development of personalized therapeutic approaches and improved clinical outcomes in the patients with urological diseases.
{"title":"Tissue Engineering and Cell Technologies in the Treatment of Urethral Strictures","authors":"Natalia V. Rassomakhina, Astemir R. Likhov, Daria R. Shisterova, Ulyana A. Apukhtina, Veronika N. Volodina, Igor O. Gritskov, Gevorg R. Kasyan, Viktoriya V. Zherdeva","doi":"10.1134/S0006297925604113","DOIUrl":"10.1134/S0006297925604113","url":null,"abstract":"<p>In recent years, reconstructive surgery strategies have been supplemented with innovative approaches aimed at developing tissue-engineered structures using autologous tissues and biodegradable scaffolds and matrices, the purpose of which is to reduce the risk of postoperative complications, on the one hand, while ensuring accelerated restoration of the structure and functions of organs, on the other hand. The review systematizes modern scientific trends in the field of tissue engineering of the urethra, focused on creation of biocompatible and functionally active tissue-engineered structures using achievements of cellular technologies and materials science. Particular attention is paid to describing the mechanisms and ways of forming a complete and functional three-dimensional structure of the urethra, including the use of organoids. It is expected that this strategy will contribute to the development of personalized therapeutic approaches and improved clinical outcomes in the patients with urological diseases.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S282 - S317"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147337012","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S0006297925604071
Darya N. Zinovieva, Vasilina A. Zakharova, Elena D. Nikolskaya, Ivan V. Romashkin, Mariia R. Mollaeva, Maria B. Sokol, Margarita V. Chirkina, Ivan A. Gulyaev, Maxim A. Klimenko, Nikita G. Yabbarov
Widespread interest and broad application of alginic acid and its salts in tissue engineering, regenerative medicine, biotechnology, and pharmaceutical industry is due to the several unique properties: biomechanical compatibility with living tissue, lack of toxicity, and bioabsorption capacity. This literature review analyzes effects of the anionic structure of the binary alginate copolymer on physicochemical properties of the resulting solutions and gels, as well as characteristics and conditions of their processing to obtain functional products for medical and biological applications. Dependence of functionality of the products on the ratio of M(β-D-mannuronate)/G(α-L-guluronate) blocks in the chain and on the source of alginate are also considered. Influence of the quantitative content of guluronic (G) acid blocks in the chain of linear alginate on its susceptibility to H+-induced gelation is described. A review of the mechanisms of gelling in the alginate solutions caused by formation of ionic, hydrogen, and covalent bonds is provided. In particular, attention is paid to the rate of dissolution of alginate salts, viscosity properties of the solutions based on them, and their dependence on ionic strength and pH. The mechanisms of interaction between both native and chemically modified alginates with various biologically active substances, drugs, and surfactants are considered. A detailed study of these processes opens new possibilities not only for obtaining dimensionally stable gels for tissue engineering structures, but also for obtaining systems designed for the controlled release of drugs.
褐藻酸及其盐类由于其与活体组织具有生物力学相容性、无毒、生物吸收等特性,在组织工程、再生医学、生物技术和制药等领域得到了广泛的关注和应用。本文综述了双藻酸盐共聚物的阴离子结构对溶液和凝胶的理化性质的影响,以及它们的加工特点和条件,以获得用于医疗和生物应用的功能性产品。产物的功能依赖于链中M(β- d -甘露醛酸酯)/G(α- l -谷氨醛酸酯)的比例和海藻酸盐的来源。描述了线性海藻酸链中古鲁醛酸(G)块的定量含量对其对H+诱导凝胶化的敏感性的影响。综述了海藻酸盐溶液中由离子、氢和共价键形成的胶凝机制。特别关注海藻酸盐的溶解速率,基于它们的溶液的粘度特性,以及它们对离子强度和ph的依赖。考虑了天然和化学修饰的海藻酸盐与各种生物活性物质,药物和表面活性剂之间相互作用的机制。对这些过程的详细研究不仅为获得用于组织工程结构的尺寸稳定凝胶提供了新的可能性,而且为获得用于药物控制释放的系统提供了新的可能性。
{"title":"Alginate Hydrogels: Methods of Preparation and Application in Tissue Engineering and Targeted Drug Delivery","authors":"Darya N. Zinovieva, Vasilina A. Zakharova, Elena D. Nikolskaya, Ivan V. Romashkin, Mariia R. Mollaeva, Maria B. Sokol, Margarita V. Chirkina, Ivan A. Gulyaev, Maxim A. Klimenko, Nikita G. Yabbarov","doi":"10.1134/S0006297925604071","DOIUrl":"10.1134/S0006297925604071","url":null,"abstract":"<p>Widespread interest and broad application of alginic acid and its salts in tissue engineering, regenerative medicine, biotechnology, and pharmaceutical industry is due to the several unique properties: biomechanical compatibility with living tissue, lack of toxicity, and bioabsorption capacity. This literature review analyzes effects of the anionic structure of the binary alginate copolymer on physicochemical properties of the resulting solutions and gels, as well as characteristics and conditions of their processing to obtain functional products for medical and biological applications. Dependence of functionality of the products on the ratio of M(β-D-mannuronate)/G(α-L-guluronate) blocks in the chain and on the source of alginate are also considered. Influence of the quantitative content of guluronic (G) acid blocks in the chain of linear alginate on its susceptibility to H<sup>+</sup>-induced gelation is described. A review of the mechanisms of gelling in the alginate solutions caused by formation of ionic, hydrogen, and covalent bonds is provided. In particular, attention is paid to the rate of dissolution of alginate salts, viscosity properties of the solutions based on them, and their dependence on ionic strength and pH. The mechanisms of interaction between both native and chemically modified alginates with various biologically active substances, drugs, and surfactants are considered. A detailed study of these processes opens new possibilities not only for obtaining dimensionally stable gels for tissue engineering structures, but also for obtaining systems designed for the controlled release of drugs.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S225 - S250"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336892","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S0006297925603727
Andrey D. Bondarev, Konstantin Yu. Kulebyakin, Nikolai B. Gusev, Pyotr A. Tyurin-Kuzmin
Insulin exerts a complex effect on metabolism, cell growth, and differentiation interacting with its receptor. Adipose tissue is one of the key targets for insulin; in this tissue insulin regulates the processes of energy storage, as well as tissue renewal and emergence of new adipocytes. Insulin activates conversion of glucose into fatty acids, inhibits lipolysis, and induces adipogenic differentiation of adipose tissue stem cells. The insulin receptor is a classic tyrosine kinase receptor that activate phosphoinositide-3-kinase and mitogen-activated protein kinase signaling cascades. At the same time, insulin receptor activates several non-canonical signaling cascades that determine features of the receptor functioning. For example, insulin can affect phosphoinositide metabolism, as well as calcium and redox-dependent signaling. In addition, the insulin receptor can also interact with the trimeric G proteins-coupled receptors (GPCRs). Here, we review canonical and non-canonical signaling cascades activated by the insulin receptor and molecular mechanisms of their involvement in regulating the human adipose tissue renewal.
{"title":"Canonical and Non-Canonical Mechanisms of Insulin-Dependent Signaling Regulating Adipogenic Differentiation in Adipose Tissue Renewal","authors":"Andrey D. Bondarev, Konstantin Yu. Kulebyakin, Nikolai B. Gusev, Pyotr A. Tyurin-Kuzmin","doi":"10.1134/S0006297925603727","DOIUrl":"10.1134/S0006297925603727","url":null,"abstract":"<p>Insulin exerts a complex effect on metabolism, cell growth, and differentiation interacting with its receptor. Adipose tissue is one of the key targets for insulin; in this tissue insulin regulates the processes of energy storage, as well as tissue renewal and emergence of new adipocytes. Insulin activates conversion of glucose into fatty acids, inhibits lipolysis, and induces adipogenic differentiation of adipose tissue stem cells. The insulin receptor is a classic tyrosine kinase receptor that activate phosphoinositide-3-kinase and mitogen-activated protein kinase signaling cascades. At the same time, insulin receptor activates several non-canonical signaling cascades that determine features of the receptor functioning. For example, insulin can affect phosphoinositide metabolism, as well as calcium and redox-dependent signaling. In addition, the insulin receptor can also interact with the trimeric G proteins-coupled receptors (GPCRs). Here, we review canonical and non-canonical signaling cascades activated by the insulin receptor and molecular mechanisms of their involvement in regulating the human adipose tissue renewal.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S355 - S372"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336898","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S0006297925602734
Olga S. Kostareva, Svetlana V. Tishchenko, Darya V. Zyurkalova, Alisa O. Mikhaylina
The Escherichia coli bacterial expression system was the first platform developed for recombinant protein production and remains the fastest, simplest, and most cost-effective system for achieving high protein yields for fundamental research, as well as biotechnological and pharmaceutical applications. Bacterial surface display systems and secretion of target proteins have become widely used approaches. These strategies help prevent intracellular aggregation and proteolytic degradation of recombinant proteins, enabling the recovery of soluble, properly folded, and stable protein products. In the case of toxic proteins, secretion mitigates their inhibitory effects on essential host cell processes. Furthermore, secretion of target proteins and peptides significantly simplifies their purification. The review summarizes the data on E. coli secretion systems with a special focus on protein export and display strategies, and discusses their applications in scientific research, industrial biotechnology, and medicine.
{"title":"Recombinant Protein Secretion for Production and Purification in Bacterial Systems","authors":"Olga S. Kostareva, Svetlana V. Tishchenko, Darya V. Zyurkalova, Alisa O. Mikhaylina","doi":"10.1134/S0006297925602734","DOIUrl":"10.1134/S0006297925602734","url":null,"abstract":"<p>The <i>Escherichia coli</i> bacterial expression system was the first platform developed for recombinant protein production and remains the fastest, simplest, and most cost-effective system for achieving high protein yields for fundamental research, as well as biotechnological and pharmaceutical applications. Bacterial surface display systems and secretion of target proteins have become widely used approaches. These strategies help prevent intracellular aggregation and proteolytic degradation of recombinant proteins, enabling the recovery of soluble, properly folded, and stable protein products. In the case of toxic proteins, secretion mitigates their inhibitory effects on essential host cell processes. Furthermore, secretion of target proteins and peptides significantly simplifies their purification. The review summarizes the data on<i> E. coli</i> secretion systems with a special focus on protein export and display strategies, and discusses their applications in scientific research, industrial biotechnology, and medicine.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S163 - S192"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336931","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S0006297925604393
Denis L. Atroshenko, Svyatoslav S. Savin, Tatyana S. Oretskaya, Vladimir I. Tishkov
D-Amino acid oxidase (DAAO, EC 1.4.3.3) is a FAD-dependent enzyme that catalyzes the oxidative deamination of D-amino acids to produce the corresponding α-keto acids, hydrogen peroxide, and ammonium ion. High stereoselectivity toward D-enantiomers and favorable kinetic parameters make DAAO a convenient biocatalytic element for analytical applications. This review systematizes the main areas of DAAO use in bioanalysis, including clinical diagnostics, monitoring of food and biotechnological processes, and environmental surveillance. Sensor platforms and detection modes are discussed, including colorimetry, fluorimetry, chemiluminescence, electrochemistry, photoelectrochemistry, and oxygen-based detection methods. The review also addresses factors determining analytical suitability, strategies to broaden selectivity, as well as engineering approaches and structure-guided discovery of new DAAOs. Current limitations are highlighted and future prospects are outlined, such as improving enzyme stability, scaling up portable devices, and integrating biosensing with digital analytics and machine-learning algorithms.
d -氨基酸氧化酶(DAAO, EC 1.4.3.3)是一种fad依赖性酶,它催化d -氨基酸氧化脱胺生成相应的α-酮酸、过氧化氢和铵离子。对d -对映体的高立体选择性和良好的动力学参数使DAAO成为分析应用中方便的生物催化元件。本文综述了DAAO在生物分析中的主要应用领域,包括临床诊断、食品和生物技术过程监测以及环境监测。讨论了传感器平台和检测模式,包括比色法、荧光法、化学发光法、电化学、光电化学和基于氧的检测方法。本文还讨论了决定分析适用性的因素、扩大选择性的策略、工程方法和结构导向的新daao发现。强调了当前的局限性,并概述了未来的前景,例如提高酶的稳定性,扩大便携式设备的规模,以及将生物传感与数字分析和机器学习算法相结合。
{"title":"Application of D-Amino Acid Oxidase (DAAO) in Bioanalytics","authors":"Denis L. Atroshenko, Svyatoslav S. Savin, Tatyana S. Oretskaya, Vladimir I. Tishkov","doi":"10.1134/S0006297925604393","DOIUrl":"10.1134/S0006297925604393","url":null,"abstract":"<p>D-Amino acid oxidase (DAAO, EC 1.4.3.3) is a FAD-dependent enzyme that catalyzes the oxidative deamination of D-amino acids to produce the corresponding α-keto acids, hydrogen peroxide, and ammonium ion. High stereoselectivity toward D-enantiomers and favorable kinetic parameters make DAAO a convenient biocatalytic element for analytical applications. This review systematizes the main areas of DAAO use in bioanalysis, including clinical diagnostics, monitoring of food and biotechnological processes, and environmental surveillance. Sensor platforms and detection modes are discussed, including colorimetry, fluorimetry, chemiluminescence, electrochemistry, photoelectrochemistry, and oxygen-based detection methods. The review also addresses factors determining analytical suitability, strategies to broaden selectivity, as well as engineering approaches and structure-guided discovery of new DAAOs. Current limitations are highlighted and future prospects are outlined, such as improving enzyme stability, scaling up portable devices, and integrating biosensing with digital analytics and machine-learning algorithms.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S84 - S97"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336891","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-04DOI: 10.1134/S0006297925603922
Nadezhda K. Marynich, Alexandra V. Gavshina, Milana M. Verdish, Alexander P. Savitsky, Irina G. Meerovich
Fluorescent proteins (FP) are widely used to visualize biological processes in living cells, including their use as genetically encoded markers for molecular and cellular research. However, their expression, even at the cellular level, could lead to some difficulties in interpreting molecular events due to protein–cell interactions. At the level of immunocompetent organisms, immune mechanisms could also take place, complicating the work with the cells expressing fluorescent proteins and interpretation of the experimental results. This led to the study of immunogenicity of FPs in the models of various diseases, in particular, cancer, and development of the models exhibiting immune tolerance to FP. This review describes various approaches for selecting disease models that are more immunotolerant to the expression of fluorescent proteins, and for reducing immunogenicity of both FP-expressing tumor models and some other diseases models. It highlights the ways to use the increased immunogenicity of the fluorescent tumors in experimental oncology, as well highlights some aspects of reducing immunogenicity of the fluorescent proteins exogenously administered to laboratory animals.
{"title":"Immunogenicity of Fluorescent Tumor Models Based on Colored Fluorescent Proteins, Ways for Overcoming It and Using It","authors":"Nadezhda K. Marynich, Alexandra V. Gavshina, Milana M. Verdish, Alexander P. Savitsky, Irina G. Meerovich","doi":"10.1134/S0006297925603922","DOIUrl":"10.1134/S0006297925603922","url":null,"abstract":"<p>Fluorescent proteins (FP) are widely used to visualize biological processes in living cells, including their use as genetically encoded markers for molecular and cellular research. However, their expression, even at the cellular level, could lead to some difficulties in interpreting molecular events due to protein–cell interactions. At the level of immunocompetent organisms, immune mechanisms could also take place, complicating the work with the cells expressing fluorescent proteins and interpretation of the experimental results. This led to the study of immunogenicity of FPs in the models of various diseases, in particular, cancer, and development of the models exhibiting immune tolerance to FP. This review describes various approaches for selecting disease models that are more immunotolerant to the expression of fluorescent proteins, and for reducing immunogenicity of both FP-expressing tumor models and some other diseases models. It highlights the ways to use the increased immunogenicity of the fluorescent tumors in experimental oncology, as well highlights some aspects of reducing immunogenicity of the fluorescent proteins exogenously administered to laboratory animals.</p>","PeriodicalId":483,"journal":{"name":"Biochemistry (Moscow)","volume":"91 1","pages":"S333 - S354"},"PeriodicalIF":2.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147336896","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}