This field study investigated the population structure, distribution pattern and habitat utilization of Yellow-wattled Lapwings. The line transect method was used to estimate the density of Yellow-wattled Lapwings. An average of 394 individuals including 77 chicks of Yellow-wattled Lapwings have been registered with an average density of 38 birds per km. The outcome of the GLM analysis exhibited, that Bakshi Ka Talab had the highest lapwing count while, Malihabad had the lowest lapwing count. A significant lapwing count in the year 2021 was confirmed. The winter season had the lowest lapwing counts, whereas the summer season had the highest values. Moreover, the largest lapwing counts were estimated in uncultivated while, the lowest lapwing count was documented in river habitat types. There was a significant difference in the mean flock size across the seasons and the habitat types. Being sighted in flocks of various sizes the distribution pattern was found to be clumped in Yellow-wattled Lapwings. The results of the factorial ANOVA showed a significant difference in the habitat utilization of Yellow-wattled Lapwings across study sites, years, seasons and habitat types. Uncultivated habitat types were the most utilized habitat types during summer seasons.
{"title":"Population structure, distribution pattern and habitat utilization of Yellow-wattled Lapwing, Vanellus malabaricus (Boddaert, 1783), in Northern India.","authors":"Prateek, Himanshu Mishra, Vikas Kumar, Ashish Kumar","doi":"10.1186/s40850-025-00222-6","DOIUrl":"10.1186/s40850-025-00222-6","url":null,"abstract":"<p><p>This field study investigated the population structure, distribution pattern and habitat utilization of Yellow-wattled Lapwings. The line transect method was used to estimate the density of Yellow-wattled Lapwings. An average of 394 individuals including 77 chicks of Yellow-wattled Lapwings have been registered with an average density of 38 birds per km. The outcome of the GLM analysis exhibited, that Bakshi Ka Talab had the highest lapwing count while, Malihabad had the lowest lapwing count. A significant lapwing count in the year 2021 was confirmed. The winter season had the lowest lapwing counts, whereas the summer season had the highest values. Moreover, the largest lapwing counts were estimated in uncultivated while, the lowest lapwing count was documented in river habitat types. There was a significant difference in the mean flock size across the seasons and the habitat types. Being sighted in flocks of various sizes the distribution pattern was found to be clumped in Yellow-wattled Lapwings. The results of the factorial ANOVA showed a significant difference in the habitat utilization of Yellow-wattled Lapwings across study sites, years, seasons and habitat types. Uncultivated habitat types were the most utilized habitat types during summer seasons.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"10 1","pages":"1"},"PeriodicalIF":1.4,"publicationDate":"2025-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11765937/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143047268","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-29DOI: 10.1186/s40850-024-00220-0
Soodong Lee, Chunghyeon Oh, Bonggyo Cho, Youngsub Han
Background: The crested ibis, a species that relies on wetland ecosystems for survival, was once found throughout East Asia but has declined to near extinction in Korea, Russia, and Japan, except China. Artificial propagation of seven individuals found in Yangxian, Shaanxi Province, China has resulted in a stable population. Furthermore, South Korea and Japan are working on restoring populations through donations from China. Artificial propagation began in 2008, and in 2019, 40 individuals born between 2014 and 2018 were released into the natural habitat for the first time. We conducted this study to analyze the habitat environment, home range, and habitat usage patterns of a 2016-born male and a 2017-born female who attempted to reproduce naturally for the first time.
Results: After forming a breeding pair on April 3, 2020, the pair made two breeding attempts, built a nest in Pinus densiflora, and succeeded in hatching the chicks, but failed to raise them. The home range analysis showed that the area was 1.777-2.425 km² for MCP 100%, and 0.347-2.085 km² for 95% KDE. Meanwhile, the core habitat ranged from 0.007 to 0.296 km² (KDE 50%), indicating differences depending on the time of year and the individual being studied. Breeding pairs were estimated to spend over 50% of their recorded occurrences within 50 m during nesting for incubation, resting, and other activities. They mainly used in paddy fields, but from April to June, when onions and garlic were growing, they searched for food in fields, cemeteries, reservoirs, and other areas.
Conclusion: Breeding pairs have increasingly become more active near the nest, and Changnyeong-gun, where they were released, has large agricultural land suitable for crested ibis habitat. However, there is a problem that during the breeding season from April to June, most paddy fields are maintained as garlic and onion fields, which are then converted back for rice cultivation from May to June through double-cropping. Accordingly, for stable laying and rearing, it is necessary to contemplate how to maintain rice paddies, which serve as feeding grounds in the core habitats.
{"title":"Understanding the home range characteristics of the first naturally bred pair of crested ibis(Nipponia nippon) released into the natural habitat.","authors":"Soodong Lee, Chunghyeon Oh, Bonggyo Cho, Youngsub Han","doi":"10.1186/s40850-024-00220-0","DOIUrl":"10.1186/s40850-024-00220-0","url":null,"abstract":"<p><strong>Background: </strong>The crested ibis, a species that relies on wetland ecosystems for survival, was once found throughout East Asia but has declined to near extinction in Korea, Russia, and Japan, except China. Artificial propagation of seven individuals found in Yangxian, Shaanxi Province, China has resulted in a stable population. Furthermore, South Korea and Japan are working on restoring populations through donations from China. Artificial propagation began in 2008, and in 2019, 40 individuals born between 2014 and 2018 were released into the natural habitat for the first time. We conducted this study to analyze the habitat environment, home range, and habitat usage patterns of a 2016-born male and a 2017-born female who attempted to reproduce naturally for the first time.</p><p><strong>Results: </strong>After forming a breeding pair on April 3, 2020, the pair made two breeding attempts, built a nest in Pinus densiflora, and succeeded in hatching the chicks, but failed to raise them. The home range analysis showed that the area was 1.777-2.425 km² for MCP 100%, and 0.347-2.085 km² for 95% KDE. Meanwhile, the core habitat ranged from 0.007 to 0.296 km² (KDE 50%), indicating differences depending on the time of year and the individual being studied. Breeding pairs were estimated to spend over 50% of their recorded occurrences within 50 m during nesting for incubation, resting, and other activities. They mainly used in paddy fields, but from April to June, when onions and garlic were growing, they searched for food in fields, cemeteries, reservoirs, and other areas.</p><p><strong>Conclusion: </strong>Breeding pairs have increasingly become more active near the nest, and Changnyeong-gun, where they were released, has large agricultural land suitable for crested ibis habitat. However, there is a problem that during the breeding season from April to June, most paddy fields are maintained as garlic and onion fields, which are then converted back for rice cultivation from May to June through double-cropping. Accordingly, for stable laying and rearing, it is necessary to contemplate how to maintain rice paddies, which serve as feeding grounds in the core habitats.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"9 1","pages":"30"},"PeriodicalIF":1.4,"publicationDate":"2024-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11606112/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142755352","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-13DOI: 10.1186/s40850-024-00219-7
Mohamed A M Alsafy, Samir A A El-Gendy, Hanan H Abd-Elhafeez, Soha Soliman, Atef Erasha, Safwat Ali, Karam Roshdy, Ahmed M Rashwan
Background: Kuruma shrimp (Marsupenaeus japonicus) is a commercially important crustacean and a valuable global food source. This study employed scanning electron microscopy (SEM) to explore the morphology and morphometric features of the Marsupenaeus japonicus cephalothoracic structures, including antennules, antennas, scaphocerite, rostrums, and eye stalks. The primary focus was on understanding the role of each part, especially through the examination of setae, which are crucial for chemoreception and defense. Additionally, energy dispersive X-ray spectroscopy (EDX) analysis was utilized to identify the elemental composition of these structures.
Material and methods: The samples from the heads of fifteen Marsupenaeus japonicus were studied by gross morphology and morphometry, SEM, and EDX analysis. This study is the first to integrate both SEM and EDX techniques for a detailed analysis of these cephalothoracic structures, offering an innovative approach to understanding both morphological and elemental characteristics.
Results: Marsupenaeus japonicus exhibited two antennules and two antennae. The antenna featured four basal segments: basicerite, ischiocerite, merocerite, and carpocerite, each with distinctive articulations and setae distribution. The antennule, with three segments covered by plumose setae, displayed curved cone-shaped flagellae. The scaphocerite, resembling a paddle, showcased plumose setae, while the rostrum exhibited dorsal and ventral spines, lateral grooves, and unique setal arrangements. Setal measurements across structures revealed diverse lengths and widths, indicating functional specialization. The compound eyes were connected to an optic stalk adorned with plumose setae. EDX analysis revealed higher percentages of calcium and phosphorus in the spear-like structures of the scaphocerite, rostrum, and antenna, respectively.
Conclusion: This investigation provides a thorough examination of the intricate morphological features of the cephalothoracic region of Marsupenaeus japonicus, shedding light on its sensory and defensive capabilities. The novel application of both SEM and EDX not only deepens our insights into these structures but also lays the groundwork for future studies using this dual approach to explore crustacean morphology, with potential advantages for sustainable aquaculture and the conservation of marine ecosystems.
背景:库氏对虾(Marsupenaeus japonicus)是一种具有重要商业价值的甲壳类动物,也是全球珍贵的食物来源。本研究采用扫描电子显微镜(SEM)来探索日本马氏对虾头胸甲结构的形态和形态计量特征,包括触角、天线、鳞甲、喙和眼柄。研究的主要重点是了解各部分的作用,尤其是对化学感知和防御至关重要的刚毛的研究。此外,还利用能量色散 X 射线光谱(EDX)分析来确定这些结构的元素组成:通过大体形态学和形态测量学、扫描电镜和 EDX 分析,对 15 只日本马氏栉水母的头部样本进行了研究。该研究首次将 SEM 和 EDX 技术相结合,对这些头胸部结构进行了详细分析,为了解形态和元素特征提供了一种创新方法:结果:日本火星虫有两个触角和两个触须。触角有四个基节:基节(basicerite)、异基节(ischiocerite)、合基节(merocerite)和腕基节(carpocerite),每个基节都有独特的关节和刚毛分布。触角有三节,被羽状刚毛覆盖,具有弯曲的锥形鞭毛。鳞甲像一个桨,显示出羽状刚毛,而喙显示出背侧和腹侧的棘刺、侧沟和独特的刚毛排列。对不同结构的刚毛进行测量后发现,它们的长度和宽度各不相同,这表明它们在功能上各有特点。复眼与缀有羽状刚毛的视茎相连。乙二胺四乙酸氧化物分析表明,在鳞甲、喙和触角的矛状结构中,钙和磷的比例分别较高:本研究深入探讨了日本马氏栉水母头胸部复杂的形态特征,揭示了其感官和防御能力。SEM 和 EDX 的新颖应用不仅加深了我们对这些结构的了解,还为今后使用这种双重方法探索甲壳动物形态的研究奠定了基础,对可持续水产养殖和海洋生态系统保护具有潜在的优势。
{"title":"Scanning electron microscopy, morphometric and energy dispersive X-Ray analysis of cephalothoracic structures exploring defensive and sensory features in kuruma shrimp (Marsupenaeus japonicus Spence Bate, 1888).","authors":"Mohamed A M Alsafy, Samir A A El-Gendy, Hanan H Abd-Elhafeez, Soha Soliman, Atef Erasha, Safwat Ali, Karam Roshdy, Ahmed M Rashwan","doi":"10.1186/s40850-024-00219-7","DOIUrl":"10.1186/s40850-024-00219-7","url":null,"abstract":"<p><strong>Background: </strong>Kuruma shrimp (Marsupenaeus japonicus) is a commercially important crustacean and a valuable global food source. This study employed scanning electron microscopy (SEM) to explore the morphology and morphometric features of the Marsupenaeus japonicus cephalothoracic structures, including antennules, antennas, scaphocerite, rostrums, and eye stalks. The primary focus was on understanding the role of each part, especially through the examination of setae, which are crucial for chemoreception and defense. Additionally, energy dispersive X-ray spectroscopy (EDX) analysis was utilized to identify the elemental composition of these structures.</p><p><strong>Material and methods: </strong>The samples from the heads of fifteen Marsupenaeus japonicus were studied by gross morphology and morphometry, SEM, and EDX analysis. This study is the first to integrate both SEM and EDX techniques for a detailed analysis of these cephalothoracic structures, offering an innovative approach to understanding both morphological and elemental characteristics.</p><p><strong>Results: </strong>Marsupenaeus japonicus exhibited two antennules and two antennae. The antenna featured four basal segments: basicerite, ischiocerite, merocerite, and carpocerite, each with distinctive articulations and setae distribution. The antennule, with three segments covered by plumose setae, displayed curved cone-shaped flagellae. The scaphocerite, resembling a paddle, showcased plumose setae, while the rostrum exhibited dorsal and ventral spines, lateral grooves, and unique setal arrangements. Setal measurements across structures revealed diverse lengths and widths, indicating functional specialization. The compound eyes were connected to an optic stalk adorned with plumose setae. EDX analysis revealed higher percentages of calcium and phosphorus in the spear-like structures of the scaphocerite, rostrum, and antenna, respectively.</p><p><strong>Conclusion: </strong>This investigation provides a thorough examination of the intricate morphological features of the cephalothoracic region of Marsupenaeus japonicus, shedding light on its sensory and defensive capabilities. The novel application of both SEM and EDX not only deepens our insights into these structures but also lays the groundwork for future studies using this dual approach to explore crustacean morphology, with potential advantages for sustainable aquaculture and the conservation of marine ecosystems.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"9 1","pages":"29"},"PeriodicalIF":1.4,"publicationDate":"2024-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11558839/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142630518","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Grant's gazelles (Nanger granti) are classified as of least concern by the IUCN, although their number is declining due to several factors. A few research studies have been conducted on Grant's gazelle in Ethiopia. Thus, the present study was carried out to determine the population size and habitat association of Grant gazelle in the Ene Forest of western Ethiopia, comprising the dry and wet seasons. The study area was stratified into four habitats: woodland, mixed woodland, riverine forest, and grassland habitats. The data were collected using the direct observation technique. The data were analyzed using descriptive statistics and Pearson's chi-square (χ2) test. The average estimated Grant gazelle population was 136 ± 23 individuals, with a density of 9/km2. The adult male-to-adult female sex ratio was 1:1.40 and 1:1.26 during the wet and dry seasons, respectively. The largest herd size (N = 6) was observed during the wet season, and the smallest (N = 4) was observed during the dry season. The highest numbers of Grant gazelles were observed in the grassland habitat during the wet season and in the woodland during the dry season. More Gazelles (N = 65) were observed in the woodland habitat compared to the other habitat types. The continued existence of the Grant's gazelle population in the area and the suitability of the environment depend significantly on ongoing assessments of habitat change and management intervention.
{"title":"Population estimate and habitat association of Grant's gazelle (Nanger granti Brooke, 1872) in the Ene Forest of Dale Sadi district, western Ethiopia.","authors":"Paulos Bultum, Wondimagegnehu Tekalign, Taye Dobamo","doi":"10.1186/s40850-024-00217-9","DOIUrl":"10.1186/s40850-024-00217-9","url":null,"abstract":"<p><p>Grant's gazelles (Nanger granti) are classified as of least concern by the IUCN, although their number is declining due to several factors. A few research studies have been conducted on Grant's gazelle in Ethiopia. Thus, the present study was carried out to determine the population size and habitat association of Grant gazelle in the Ene Forest of western Ethiopia, comprising the dry and wet seasons. The study area was stratified into four habitats: woodland, mixed woodland, riverine forest, and grassland habitats. The data were collected using the direct observation technique. The data were analyzed using descriptive statistics and Pearson's chi-square (χ<sup>2</sup>) test. The average estimated Grant gazelle population was 136 ± 23 individuals, with a density of 9/km<sup>2</sup>. The adult male-to-adult female sex ratio was 1:1.40 and 1:1.26 during the wet and dry seasons, respectively. The largest herd size (N = 6) was observed during the wet season, and the smallest (N = 4) was observed during the dry season. The highest numbers of Grant gazelles were observed in the grassland habitat during the wet season and in the woodland during the dry season. More Gazelles (N = 65) were observed in the woodland habitat compared to the other habitat types. The continued existence of the Grant's gazelle population in the area and the suitability of the environment depend significantly on ongoing assessments of habitat change and management intervention.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"9 1","pages":"28"},"PeriodicalIF":1.4,"publicationDate":"2024-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11533338/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142576509","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: The Yangtze finless porpoise (Neophocaena asiaeorientalis asiaeorientalis) is critically endangered and has suffered from extensive habitat loss and fragmentation. Knowledge of its habitat preference could assist the conservation of the species and associated ecosystem. In the present study, spatiotemporal variations and driving factors of habitat use of a Yangtze finless porpoise population were studied in a 30-km section of the Yangtze mainstream. Seasonal variation in porpoise occurrences was observed based on visual surveys conducted from 2022 to 2023, with five surveys during the dry season and seven surveys during the wet season. Biological and environmental factors were synchronously sampled in both seasons. The maximum entropy model (MaxEnt) was applied to get the effects of biological and environmental variables on porpoise habitat preference.
Results: Within the study area, high-suitability habitats of the finless porpoises accounted for 19.0% and 15.4% of the area during the dry and wet seasons, respectively. The high-suitability habitat shifted from the mainstream in the dry season to the sandbar head and tributary area in the wet season. In the dry season, variables influencing the distribution were phytoplankton biomass, water velocity, and zooplankton biomass, which contributed 97.05% variation in the MaxEnt modeling. In the wet season, water depth, surface water temperature, and zooplankton biomass accounted for 97.69% variation of the distribution. Above results highlight that food availability plays an important role in porpoises distribution regardless of seasons, particularly in the dry season. This is because plankton is the primary food source for filter-feeding and omnivorous fish, especially those in the upper-middle layer which are frequently preyed on by finless porpoises.
Conclusion: Suitable areas for finless porpoises, particularly those with high suitability, differed significantly across seasons at a fine-scale in the Yangtze mainstream. Seasonal variations in habitat were driven by different factors. But food availability plays an important role in porpoises distribution regardless of seasons, particularly in the dry season. These results suggest prioritizing conservation of the finless porpoise in the dry season when fish resources are relatively scarce. Measures including monitoring and evaluating prey resources should be considered. More attention should also be paid on management of shipping in the dry season given that the high-suitability habitat of the finless porpoises shifts to the mainstream.
{"title":"Spatiotemporal variations and driving factors of fine-scale habitat use by the Yangtze finless porpoise population in the Yangtze River.","authors":"Ping Zhang, Zhongyin Yu, Daoping Yu, Bangzhi Ding, Minmin Chen","doi":"10.1186/s40850-024-00218-8","DOIUrl":"10.1186/s40850-024-00218-8","url":null,"abstract":"<p><strong>Background: </strong>The Yangtze finless porpoise (Neophocaena asiaeorientalis asiaeorientalis) is critically endangered and has suffered from extensive habitat loss and fragmentation. Knowledge of its habitat preference could assist the conservation of the species and associated ecosystem. In the present study, spatiotemporal variations and driving factors of habitat use of a Yangtze finless porpoise population were studied in a 30-km section of the Yangtze mainstream. Seasonal variation in porpoise occurrences was observed based on visual surveys conducted from 2022 to 2023, with five surveys during the dry season and seven surveys during the wet season. Biological and environmental factors were synchronously sampled in both seasons. The maximum entropy model (MaxEnt) was applied to get the effects of biological and environmental variables on porpoise habitat preference.</p><p><strong>Results: </strong>Within the study area, high-suitability habitats of the finless porpoises accounted for 19.0% and 15.4% of the area during the dry and wet seasons, respectively. The high-suitability habitat shifted from the mainstream in the dry season to the sandbar head and tributary area in the wet season. In the dry season, variables influencing the distribution were phytoplankton biomass, water velocity, and zooplankton biomass, which contributed 97.05% variation in the MaxEnt modeling. In the wet season, water depth, surface water temperature, and zooplankton biomass accounted for 97.69% variation of the distribution. Above results highlight that food availability plays an important role in porpoises distribution regardless of seasons, particularly in the dry season. This is because plankton is the primary food source for filter-feeding and omnivorous fish, especially those in the upper-middle layer which are frequently preyed on by finless porpoises.</p><p><strong>Conclusion: </strong>Suitable areas for finless porpoises, particularly those with high suitability, differed significantly across seasons at a fine-scale in the Yangtze mainstream. Seasonal variations in habitat were driven by different factors. But food availability plays an important role in porpoises distribution regardless of seasons, particularly in the dry season. These results suggest prioritizing conservation of the finless porpoise in the dry season when fish resources are relatively scarce. Measures including monitoring and evaluating prey resources should be considered. More attention should also be paid on management of shipping in the dry season given that the high-suitability habitat of the finless porpoises shifts to the mainstream.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"9 1","pages":"27"},"PeriodicalIF":1.4,"publicationDate":"2024-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492758/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142478159","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-10DOI: 10.1186/s40850-024-00214-y
Alberto J Ríos-Flores, Sandra López-Flores, Jose A Martínez-Moreno, Karen Y Falcon-Romero, Gloria G Asencio-Alcudia, Cesar A Sepúlveda-Quiroz, Rafael Martínez-García, Elizabeth Rodríguez-Salazar, Carlos A Alvarez González, Ernesto Maldonado
Background: The tropical gar (Atractosteus tropicus), a member of the Lepisosteidae family, is native to regions extending from southeastern Mexico to southern Costa Rica. This species serves as a unique bridge between tetrapods and teleosts due to its phylogenetic position, slow evolutionary rate, dense genetic map, gene similarities with humans, and ease of laboratory cultivation. As a taxonomic sister group to teleosts like the zebrafish (Danio rerio), known for its high regenerative capacity, it remains unclear whether the tropical gar shares a similar ability for regeneration.
Results: This study aims to elucidate the caudal fin regeneration process in tropical gar through skeletal and histological staining methods. Juvenile specimens were observed over a two-month period, during which they were fed brine shrimp, and anesthetized with 1% eugenol for caudal fin amputation. Samples were collected at various days post-amputation (dpa). Alcian blue and alizarin red staining were used to highlight skeletal regeneration, particularly the formation of new cartilage, while histological staining with hematoxylin and eosin was performed to observe tissue regeneration at the amputation site.
Conclusions: The findings reveal a remarkable ability for caudal fin regeneration in juvenile tropical gar. Given the Garfish evolutionary relationship with teleosts, this opens new avenues for research into tissue regeneration across different groups of Actinopterygii.
{"title":"Regeneration of the caudal fin of the evolutionary ancient tropical gar Atractosteus tropicus.","authors":"Alberto J Ríos-Flores, Sandra López-Flores, Jose A Martínez-Moreno, Karen Y Falcon-Romero, Gloria G Asencio-Alcudia, Cesar A Sepúlveda-Quiroz, Rafael Martínez-García, Elizabeth Rodríguez-Salazar, Carlos A Alvarez González, Ernesto Maldonado","doi":"10.1186/s40850-024-00214-y","DOIUrl":"10.1186/s40850-024-00214-y","url":null,"abstract":"<p><strong>Background: </strong>The tropical gar (Atractosteus tropicus), a member of the Lepisosteidae family, is native to regions extending from southeastern Mexico to southern Costa Rica. This species serves as a unique bridge between tetrapods and teleosts due to its phylogenetic position, slow evolutionary rate, dense genetic map, gene similarities with humans, and ease of laboratory cultivation. As a taxonomic sister group to teleosts like the zebrafish (Danio rerio), known for its high regenerative capacity, it remains unclear whether the tropical gar shares a similar ability for regeneration.</p><p><strong>Results: </strong>This study aims to elucidate the caudal fin regeneration process in tropical gar through skeletal and histological staining methods. Juvenile specimens were observed over a two-month period, during which they were fed brine shrimp, and anesthetized with 1% eugenol for caudal fin amputation. Samples were collected at various days post-amputation (dpa). Alcian blue and alizarin red staining were used to highlight skeletal regeneration, particularly the formation of new cartilage, while histological staining with hematoxylin and eosin was performed to observe tissue regeneration at the amputation site.</p><p><strong>Conclusions: </strong>The findings reveal a remarkable ability for caudal fin regeneration in juvenile tropical gar. Given the Garfish evolutionary relationship with teleosts, this opens new avenues for research into tissue regeneration across different groups of Actinopterygii.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"9 1","pages":"26"},"PeriodicalIF":1.4,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11465863/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142401660","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-30DOI: 10.1186/s40850-024-00216-w
Dessalegn Ejigu, Marye Gelaw
Background: Rodents are mammals of the order Rodentia, which are found in all continents except Antarctica. They are the most diverse groups of mammals representing 41% of all mammals and they are known with 33 families, 481 genera, and about 2277 species. The present study was conducted from December 2018 to August 2019 both during the dry and wet seasons using Sherman traps and live traps. Four trap sites namely forest, bushland, grassland, and sugarcane plantation were selected for data collection. Shannon-Wiener diversity index (H') was used to compute rodent species diversity, Simpson's index (D) to assess the number and abundance of rodents in the different habitats, and one-way ANOVA and independent samples t-test were used for data analysis.
Results: A total of 163 individual rodents were captured in 1776 trap nights of which 125 individuals were captured using live traps in 1176 trap nights and 38 individuals using snap traps in 600 trap nights. Among the total individual rodents captured in the Bahir Dar Blue Nile River Millennium Park, 63.8% (n = 104) were males and 36.2% (n = 59) were females. Males outnumbered females in all the grids and the difference was significant (t = 31.5, df = 10, p < 0.05). The relative abundance of rodent species indicated that 42.4% (n = 53) were Arvicanthis niloticus, 26.4% (n = 33) Rattus rattus, 17.6% (n = 22) Mus musculus, 8% (n = 10) Mastomys natalensis, and 5.6% (n = 7) Arvicanthis abyssinicus. There are more individual specimens of A. niloticus than other species identified in the area (F = 698.22, df = 4, p < 0.05). Distribution of rodents varied among the different habitats. As a result, the bushland habitat showed more diversity of rodents (H = 0.98) and comprised relatively the highest (51.2%, n = 64) number of individuals captured, while the forest habitat supported the lowest number of rodents (4%, n = 5), and the difference showed a significant difference (F = 873.37, df = 3, p < 0.05). Population density with 95% confident interval estimated as 166 individuals/ha (95% CI:164.43-167.57).
Conclusion: The present study provides basic information about population dynamics of rodents and contributes to design conservation strategies for rodents in particular and other biota of the area in general.
{"title":"Rodents of Bahir Dar Blue Nile River Millennium Park, Ethiopia.","authors":"Dessalegn Ejigu, Marye Gelaw","doi":"10.1186/s40850-024-00216-w","DOIUrl":"10.1186/s40850-024-00216-w","url":null,"abstract":"<p><strong>Background: </strong>Rodents are mammals of the order Rodentia, which are found in all continents except Antarctica. They are the most diverse groups of mammals representing 41% of all mammals and they are known with 33 families, 481 genera, and about 2277 species. The present study was conducted from December 2018 to August 2019 both during the dry and wet seasons using Sherman traps and live traps. Four trap sites namely forest, bushland, grassland, and sugarcane plantation were selected for data collection. Shannon-Wiener diversity index (H') was used to compute rodent species diversity, Simpson's index (D) to assess the number and abundance of rodents in the different habitats, and one-way ANOVA and independent samples t-test were used for data analysis.</p><p><strong>Results: </strong>A total of 163 individual rodents were captured in 1776 trap nights of which 125 individuals were captured using live traps in 1176 trap nights and 38 individuals using snap traps in 600 trap nights. Among the total individual rodents captured in the Bahir Dar Blue Nile River Millennium Park, 63.8% (n = 104) were males and 36.2% (n = 59) were females. Males outnumbered females in all the grids and the difference was significant (t = 31.5, df = 10, p < 0.05). The relative abundance of rodent species indicated that 42.4% (n = 53) were Arvicanthis niloticus, 26.4% (n = 33) Rattus rattus, 17.6% (n = 22) Mus musculus, 8% (n = 10) Mastomys natalensis, and 5.6% (n = 7) Arvicanthis abyssinicus. There are more individual specimens of A. niloticus than other species identified in the area (F = 698.22, df = 4, p < 0.05). Distribution of rodents varied among the different habitats. As a result, the bushland habitat showed more diversity of rodents (H = 0.98) and comprised relatively the highest (51.2%, n = 64) number of individuals captured, while the forest habitat supported the lowest number of rodents (4%, n = 5), and the difference showed a significant difference (F = 873.37, df = 3, p < 0.05). Population density with 95% confident interval estimated as 166 individuals/ha (95% CI:164.43-167.57).</p><p><strong>Conclusion: </strong>The present study provides basic information about population dynamics of rodents and contributes to design conservation strategies for rodents in particular and other biota of the area in general.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"9 1","pages":"25"},"PeriodicalIF":1.4,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11441244/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142356342","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Artificial reservoirs are alternative habitats for bird diversity, and knowledge of the diversity and abundance of bird species contribute to the management of the ecosystem. This study was conducted to investigate the species diversity and abundance of birds in Mai-Nigus reservoir and its surrounding semi-forest from July 2022 to March 2023. Point count method with a total of fifteen count stations at an interval of 50 m radius was used to study the diversity and abundance of bird species in the semi-forest habitat while total count employed on the reservoir. A total of 123 bird species comprising endemic and globally threatened species were identified. Order Passeriformes had the highest number of species followed by Charadriiformes and Pelecaniformes. Family Scolopacidae was the most abundant followed by Ardeidae, Ploceidae and Anatidae. Bird species richness and abundance were not significantly varied across seasons and habitats (P > 0.05). The highest species diversity (H´=3.96) were recorded in the Semi-forest during the wet season, whereas the least was recorded from reservoir during the dry season (H´=2.66). The highest and lowest species evenness of birds was recorded in Semi-forest (E = 0.725) and reservoir (E = 0.448) during the dry season, respectively. Most birds that inhabited the area had frequent relative abundance followed by uncommon and common species. Mai-Nigus reservoir and surrounding habitat host high bird diversity and this requires critical conservation concerns for the long-term survival of birds.
{"title":"Assessment of bird diversity and abundance in Mai-Nigus artificial reservoir and surrounding semi-forest in Tigray Region, Northern Ethiopia","authors":"Alembrhan Assefa, Kalayu Mesfin, Weldemariam Tesfahunegny, Birkti Fitsum, Amleset Gaim, Teklay Meles","doi":"10.1186/s40850-024-00215-x","DOIUrl":"https://doi.org/10.1186/s40850-024-00215-x","url":null,"abstract":"Artificial reservoirs are alternative habitats for bird diversity, and knowledge of the diversity and abundance of bird species contribute to the management of the ecosystem. This study was conducted to investigate the species diversity and abundance of birds in Mai-Nigus reservoir and its surrounding semi-forest from July 2022 to March 2023. Point count method with a total of fifteen count stations at an interval of 50 m radius was used to study the diversity and abundance of bird species in the semi-forest habitat while total count employed on the reservoir. A total of 123 bird species comprising endemic and globally threatened species were identified. Order Passeriformes had the highest number of species followed by Charadriiformes and Pelecaniformes. Family Scolopacidae was the most abundant followed by Ardeidae, Ploceidae and Anatidae. Bird species richness and abundance were not significantly varied across seasons and habitats (P > 0.05). The highest species diversity (H´=3.96) were recorded in the Semi-forest during the wet season, whereas the least was recorded from reservoir during the dry season (H´=2.66). The highest and lowest species evenness of birds was recorded in Semi-forest (E = 0.725) and reservoir (E = 0.448) during the dry season, respectively. Most birds that inhabited the area had frequent relative abundance followed by uncommon and common species. Mai-Nigus reservoir and surrounding habitat host high bird diversity and this requires critical conservation concerns for the long-term survival of birds.","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"104 1","pages":""},"PeriodicalIF":1.6,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142269877","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: The diaphragm, the main muscle involved in respiration and one of those responsible for maintaining life, is still little explored in terms of its morphology in wild animals. There are few studies on the anatomy of Eira barbara, a carnivorous mustelid that is a victim of the urbanization process. In order to contribute to the conservation of the species, we described the topography and morphology of the diaphragm, which may be involved in injuries caused by the impacts of human activities.
Results: We studied five specimens of Eira barbara, whose diaphragmatic muscle had a dorsal insertion on the 14th thoracic vertebra, laterally between the 8th and 13th intercostal space (EIC) and ventrally on the 8th EIC, with attachment to the xiphoid process. Consisting of three muscle regions (lumbar, costal and sternal), the diaphragm in Eira barbara showed radially arranged bundles, with the right costal muscle being slimmer than the left; the left pillar wider than the right and between them were the aortic and esophageal hiatuses. The Y-shaped tendinous center housed the foramen of the vena cava bordering the right costal region. In the most dorsal portion of the diaphragm, between the costal regions and the diaphragmatic pillar, we found two triangular-shaped regions devoid of muscle.
Conclusions: Our findings, when compared with the current literature, indicate that the location and positioning of the diaphragm are independent of the physical conformation of the species, and that the right costal region, as well as the triangular areas devoid of musculature, may be fragile points for herniation in cases of Eira barbara being run over.
{"title":"Topography and morphology of the Eira barbara diaphragm.","authors":"Aryane Maximina Melo Silva, Rogério Pereira Silva, Rogério Antônio Ribeiro Rodrigues, Elane Guerreiro Giese, Ana Rita Lima, Érika Branco","doi":"10.1186/s40850-024-00212-0","DOIUrl":"https://doi.org/10.1186/s40850-024-00212-0","url":null,"abstract":"<p><strong>Background: </strong>The diaphragm, the main muscle involved in respiration and one of those responsible for maintaining life, is still little explored in terms of its morphology in wild animals. There are few studies on the anatomy of Eira barbara, a carnivorous mustelid that is a victim of the urbanization process. In order to contribute to the conservation of the species, we described the topography and morphology of the diaphragm, which may be involved in injuries caused by the impacts of human activities.</p><p><strong>Results: </strong>We studied five specimens of Eira barbara, whose diaphragmatic muscle had a dorsal insertion on the 14th thoracic vertebra, laterally between the 8th and 13th intercostal space (EIC) and ventrally on the 8th EIC, with attachment to the xiphoid process. Consisting of three muscle regions (lumbar, costal and sternal), the diaphragm in Eira barbara showed radially arranged bundles, with the right costal muscle being slimmer than the left; the left pillar wider than the right and between them were the aortic and esophageal hiatuses. The Y-shaped tendinous center housed the foramen of the vena cava bordering the right costal region. In the most dorsal portion of the diaphragm, between the costal regions and the diaphragmatic pillar, we found two triangular-shaped regions devoid of muscle.</p><p><strong>Conclusions: </strong>Our findings, when compared with the current literature, indicate that the location and positioning of the diaphragm are independent of the physical conformation of the species, and that the right costal region, as well as the triangular areas devoid of musculature, may be fragile points for herniation in cases of Eira barbara being run over.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"9 1","pages":"23"},"PeriodicalIF":1.4,"publicationDate":"2024-08-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11363356/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142116909","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-16DOI: 10.1186/s40850-024-00213-z
Yasin İlemin
Background: Determining the density of mammalian wildlife in an ecosystem is very important for the ecosystem conservation. The aim of this study is to reveal mammalian wildlife density and compare the effect human footprint index (HFI) on the Mediterranean ecosystems. The mammalian wildlife surveys were conducted between August 2013 and December 2013, using 21 camera traps with 2175 camera trap days in a Mediterranean forest ecosystem in İzmir, Türkiye. We used random encounter model (REM) method to estimate densities.
Results: The population density for 5 mammals were; for red fox 7.89 ind./km2 (± 0.82 SE), wild boar 4.36 ind./km2 (± 0.46 SE), European hare 15.33 ind./km2 (± 03.37 SE), beech marten 0.99 ind./km2 (± 0.10 SE) and golden jackal 0.50 ind./km2 (± 0.05 SE). These results were compared with mammal community which was previously studied in another Mediterranean ecosystem in Muğla, Türkiye, includes caracal and has a lower human footprint index.
Conclusions: According to results of this study human activity which can be revealed by Human footprint index (HFI) is one of the main parameter on Mediterranean ecosystem and it is effecting the density and occurence of species in mammal community. Both a higher human footprint index and the absence of caracal might cause higher density of red fox and European hare in İzmir, Türkiye. This study also suggests that caracal might be a serious suppressor on red fox which could be explained by competition. Caracal may also control the European hare in Mediterranean forest ecosystem of Anatolia. Thus, decreasing human footprint index and maintaining caracal suppressor effect are crucial for the conservation of the whole Mediterranean ecosystem.
{"title":"Estimation of mammalian wildlife density by REM method in a Mediterranean forest ecosystem (Pinus brutia) of Türkiye: how human footprint effects mammal community?","authors":"Yasin İlemin","doi":"10.1186/s40850-024-00213-z","DOIUrl":"10.1186/s40850-024-00213-z","url":null,"abstract":"<p><strong>Background: </strong>Determining the density of mammalian wildlife in an ecosystem is very important for the ecosystem conservation. The aim of this study is to reveal mammalian wildlife density and compare the effect human footprint index (HFI) on the Mediterranean ecosystems. The mammalian wildlife surveys were conducted between August 2013 and December 2013, using 21 camera traps with 2175 camera trap days in a Mediterranean forest ecosystem in İzmir, Türkiye. We used random encounter model (REM) method to estimate densities.</p><p><strong>Results: </strong>The population density for 5 mammals were; for red fox 7.89 ind./km<sup>2</sup> (± 0.82 SE), wild boar 4.36 ind./km<sup>2</sup> (± 0.46 SE), European hare 15.33 ind./km<sup>2</sup> (± 03.37 SE), beech marten 0.99 ind./km<sup>2</sup> (± 0.10 SE) and golden jackal 0.50 ind./km<sup>2</sup> (± 0.05 SE). These results were compared with mammal community which was previously studied in another Mediterranean ecosystem in Muğla, Türkiye, includes caracal and has a lower human footprint index.</p><p><strong>Conclusions: </strong>According to results of this study human activity which can be revealed by Human footprint index (HFI) is one of the main parameter on Mediterranean ecosystem and it is effecting the density and occurence of species in mammal community. Both a higher human footprint index and the absence of caracal might cause higher density of red fox and European hare in İzmir, Türkiye. This study also suggests that caracal might be a serious suppressor on red fox which could be explained by competition. Caracal may also control the European hare in Mediterranean forest ecosystem of Anatolia. Thus, decreasing human footprint index and maintaining caracal suppressor effect are crucial for the conservation of the whole Mediterranean ecosystem.</p>","PeriodicalId":48590,"journal":{"name":"BMC Zoology","volume":"9 1","pages":"22"},"PeriodicalIF":1.4,"publicationDate":"2024-08-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11328366/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141996722","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}