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GC-rich repeat expansions: associated disorders and mechanisms. 富含GC重复序列扩增:相关疾病和机制
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2022-01-12 eCollection Date: 2021-12-01 DOI: 10.1515/medgen-2021-2099
Christopher Schröder, Bernhard Horsthemke, Christel Depienne

Noncoding repeat expansions are a well-known cause of genetic disorders mainly affecting the central nervous system. Missed by most standard technologies used in routine diagnosis, pathogenic noncoding repeat expansions have to be searched for using specific techniques such as repeat-primed PCR or specific bioinformatics tools applied to genome data, such as ExpansionHunter. In this review, we focus on GC-rich repeat expansions, which represent at least one third of all noncoding repeat expansions described so far. GC-rich expansions are mainly located in regulatory regions (promoter, 5' untranslated region, first intron) of genes and can lead to either a toxic gain-of-function mediated by RNA toxicity and/or repeat-associated non-AUG (RAN) translation, or a loss-of-function of the associated gene, depending on their size and their methylation status. We herein review the clinical and molecular characteristics of disorders associated with these difficult-to-detect expansions.

非编码重复扩增是众所周知的主要影响中枢神经系统的遗传性疾病的原因。常规诊断中使用的大多数标准技术都遗漏了病原性非编码重复扩增片段,因此必须使用特定技术(如重复引物PCR)或应用于基因组数据的特定生物信息学工具(如ExpansionHunter)来搜索。在这篇综述中,我们将重点放在富含gc的重复序列扩展上,它们至少占到目前所描述的所有非编码重复序列扩展的三分之一。富含gc的扩增主要位于基因的调控区域(启动子,5 '非翻译区,第一个内含子),并可能导致由RNA毒性和/或重复相关的非aug (RAN)翻译介导的毒性功能获得,或相关基因的功能丧失,这取决于它们的大小和甲基化状态。我们在此回顾与这些难以检测的扩张相关的疾病的临床和分子特征。
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引用次数: 0
X-linked dystonia-parkinsonism: over and above a repeat disorder. X连锁肌张力障碍性帕金森综合征:一种重复性疾病
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2022-01-12 eCollection Date: 2021-12-01 DOI: 10.1515/medgen-2021-2105
Jelena Pozojevic, Joseph Neos Cruz, Ana Westenberger

X-linked dystonia-parkinsonism (XDP) is an adult-onset neurodegenerative movement disorder, caused by a founder retrotransposon insertion in an intron of the TAF1 gene. This insertion contains a polymorphic hexanucleotide repeat (CCCTCT)n, the length of which inversely correlates with the age at disease onset (AAO) and other clinical parameters, aligning XDP with repeat expansion disorders. Nevertheless, many other pathogenic mechanisms are conceivably at play in XDP, indicating that in contrast to other repeat disorders, the (CCCTCT)n repeat may not be the actual (or only) disease cause. Here, we summarize and discuss genetic and molecular aspects of XDP, highlighting the role of the hexanucleotide repeat in age-related disease penetrance and expressivity.

x连锁肌张力障碍-帕金森病(XDP)是一种成人发病的神经退行性运动障碍,由TAF1基因内含子的奠基反转录转座子插入引起。该插入包含一个多态六核苷酸重复序列(CCCTCT)n,其长度与发病年龄(AAO)和其他临床参数呈负相关,使XDP与重复扩增疾病一致。然而,许多其他致病机制可能在XDP中起作用,这表明与其他重复序列疾病相比,(CCCTCT)n重复序列可能不是实际的(或唯一的)致病原因。在这里,我们总结和讨论了XDP的遗传和分子方面,强调了六核苷酸重复在年龄相关疾病的外显率和表达性中的作用。
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引用次数: 0
Tandem repeat expansions: the good, the bad and the hidden. 串联重复扩展:好的,坏的和隐藏的
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2022-01-12 eCollection Date: 2021-12-01 DOI: 10.1515/medgen-2021-2097
Christel Depienne
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引用次数: 0
Career satisfaction of German human genetics residents. 德国人类遗传学居民的职业满意度
IF 0.8 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2022-01-12 eCollection Date: 2021-12-01 DOI: 10.1515/medgen-2021-2103
Johanna Tecklenburg, Robert Meyer, Ilona Krey, Brigitte Schlegelberger

Objectives: The aim of this survey was to investigate the career satisfaction of human genetics residents in Germany and to analyse the influence of intrinsic and extrinsic factors.

Methods: We developed an online survey for the evaluation of a broad range of factors concerning the situation of human genetics residents in Germany using validated questionnaires and adding human genetics specific items to them. Human genetics residents working at institutions with an authorization for specialist training were asked to participate in the online survey. To analyse the situation of specialist training in human genetics and the influence of multiple factors on career satisfaction, descriptive statistics, mean descriptive statistics and comparisons of mean values as well as multiple linear regression analyses were carried out.

Results: Of the 71 institutions contacted, 41 (58 %) provided feedback and reported the number of 114 residents in human genetics. In total, 58 residents completed the questionnaire (50.9 %). Overall career satisfaction was high with a mean score of 30.8 (scale ranging from 8-40). Factors significantly influencing career satisfaction were general life satisfaction, occupational self-efficacy expectations and content with the doctors entitled to the specialty training. Except for the reduced perception to achieve their professional goals expressed by women with children, career satisfaction was influenced by neither gender nor parental status, other sociodemographic factors, variables concerning the personal professional life and the residency in general, the subjective perceived workload nor the site of specialist training. Participation in research activities differed significantly between male and female residents. The residents' assessment of their own professional prospects and the prospects of the subject were consistently positive, even though residents consider the current requirement planning by the GB-A for human geneticists as inappropriate and believe that human genetics is not yet firmly anchored as a specialist discipline in the consciousness of other medical colleagues and the general public.

Conclusions: Career satisfaction of German human genetics residents is generally high and mainly influenced by life satisfaction, occupational self-efficacy expectations and quality of the specialist training. In contrast to other specialties career satisfaction seems to be independent from gender or parental status even though male residents were significantly more often involved in research activities. In order to keep human genetics residents in the specialty, measures that enable balanced professional and care work as well as continuous improvement of specialist education, e. g. through the implementation of structured curricula and continuing education of the doctors entitled to specialist training, is of great importance.

摘要目的调查德国人类遗传学居民的职业满意度,分析内因和外因对职业满意度的影响。方法采用有效问卷,并在问卷中添加人类遗传学具体项目,开展了一项在线调查,对涉及德国人类遗传学居民状况的广泛因素进行评估。在获得专业培训授权的机构工作的人类遗传学住院医师被要求参与在线调查。为分析人类遗传学专业人才培养现状及多因素对职业满意度的影响,采用描述性统计、均值描述性统计、均值比较及多元线性回归分析。结果在联系的71家机构中,41家(58%)提供了反馈,报告了114名居民的人类遗传学。共有58名居民完成问卷,占50.9%。整体职业满意度较高,平均得分为30.8分(范围从8-40)。影响职业满意度的因素有一般生活满意度、职业自我效能期望和对专科培训医师的满意程度。除了有子女的妇女对实现职业目标的感知减少外,职业满意度不受性别和父母身份、其他社会人口因素、个人职业生活和一般居住情况的变量、主观感知的工作量和专业培训地点的影响。研究活动的参与在男性和女性居民之间存在显著差异。尽管住院医生认为GB-A目前对人类遗传学家的要求规划是不适当的,并且认为人类遗传学在其他医学同事和公众的意识中尚未牢固地作为一门专业学科,但住院医生对自己的职业前景和该学科的前景的评估始终是积极的。结论德国人类遗传学住院医师的职业满意度总体较高,主要受生活满意度、职业自我效能预期和专科培训质量的影响。与其他专业相比,尽管男性住院医生更经常参与研究活动,但职业满意度似乎与性别或父母身份无关。为了使人类遗传学住院医师保持专业,采取措施使专业和护理工作平衡,并不断改进专业教育,例如:通过实施结构化课程和继续教育,对医生进行专科资格培训,具有十分重要的意义。
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引用次数: 0
A perspective on human cell models for POLG-spectrum disorders: advantages and disadvantages of CRISPR-Cas-based vs. patient-derived iPSC models. POLG谱系障碍的人类细胞模型展望:基于CRISPR-Cas与患者衍生的iPSC模型的优缺点
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2021-12-03 eCollection Date: 2021-09-01 DOI: 10.1515/medgen-2021-2090
Cagla Cakmak, Hans Zempel

Neurogenetic diseases represent a broad group of diseases with variable genetic causes and clinical manifestations. Among these, polymerase-gamma (POLG)-spectrum disorders are relatively frequent with an estimated disease frequency of ∼1:10.000. Also, mutations in the POLG gene are by far the most important cause for mitochondriopathy. POLG-spectrum disorders usually result in progressive loss of brain function and may involve severe and deadly encephalopathy, seizures, and neuromuscular disease, as well as cardiac and hepatic failure in some cases. Onset of disease may range from birth to late adulthood, and disease duration ranges from weeks in severe cases to decades. There is no curative treatment; current animal models do not faithfully recapitulate human disease, complicating preclinical therapeutic studies. Human-based preclinical model systems must be developed to understand the human disease mechanisms and develop therapeutic approaches. In this review, we provide an overview of the current approaches to model neurogenetic disorders in a human cellular and neuronal environment with a focus on POLG-spectrum disorders. We discuss the necessity of using neuronal cells and the advantages and pitfalls of currently available cell model approaches, namely (i) CRISPR-based (i. e., genetically engineered) and induced pluripotent stem cell (iPSC) (i. e., stem cell like)-derived neuronal models and (ii) the reprogramming of patient-derived cells into iPSCs and derived neurons. Despite the fact that cell models are by definition in vitro systems incapable of recapitulating all aspects of human disease, they are still the reasonable point of start to discover disease mechanisms and develop therapeutic approaches to treat neurogenetic diseases.

摘要神经遗传性疾病代表了一组广泛的疾病,其遗传原因和临床表现各不相同。在这些疾病中,聚合酶-γ(POLG)谱疾病相对常见,估计疾病频率为~1:10.000。此外,POLG基因的突变是导致线粒体病变的最重要原因。POLG谱系障碍通常会导致大脑功能的逐渐丧失,并可能涉及严重和致命的脑病、癫痫发作、神经肌肉疾病,在某些情况下还会导致心功能衰竭和肝功能衰竭。疾病的发病时间可能从出生到成年晚期,严重病例的发病时间从几周到几十年不等。没有治疗方法;目前的动物模型并不能忠实地再现人类疾病,使临床前治疗研究复杂化。必须开发基于人类的临床前模型系统,以了解人类疾病机制并开发治疗方法。在这篇综述中,我们概述了目前在人类细胞和神经元环境中模拟神经遗传性疾病的方法,重点是POLG谱疾病。我们讨论了使用神经元细胞的必要性以及目前可用的细胞模型方法的优点和缺点,即(i)基于CRISPR的(i)。 e.基因工程)和诱导多能干细胞(iPSC)(即。 e.干细胞样)衍生的神经元模型,以及(ii)将患者衍生的细胞重新编程为iPSC和衍生的神经元。尽管根据定义,细胞模型在体外系统中无法概括人类疾病的所有方面,但它们仍然是发现疾病机制和开发治疗神经源性疾病的治疗方法的合理起点。
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引用次数: 0
Tumor spheroids and organoids as preclinical model systems. 肿瘤球体和类器官作为临床前模型系统
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2021-12-03 eCollection Date: 2021-09-01 DOI: 10.1515/medgen-2021-2093
Aria Baniahmad

The generation of three-dimensional (3D) cancer models is a novel and fascinating development in the study of personalized medicine and tumor-specific drug delivery. In addition to the classical two-dimensional (2D) adherent cell culture models, 3D spheroid and organoid cancer models that mimic the microenvironment of cancer tissue are emerging as an important preclinical model system. 3D cancer models form, similar to cancer, multiple cell-cell and cell-extracellular matrix interactions and activate different cellular cascades/pathways, like proliferation, quiescence, senescence, and necrotic or apoptotic cell death. Further, it is possible to analyze genetic variations and mutations, the microenvironment of cell-cell interactions, and the uptake of therapeutics and nanoparticles in nanomedicine. Important is also the analysis of cancer stem cells (CSCs), which could play key roles in resistance to therapy and cancer recurrence. Tumor spheroids can be generated from one tumor-derived cell line or from co-culture of two or more cell lines. Tumor organoids can be derived from tumors or may be generated from CSCs that differentiate into multiple facets of cancerous tissue. Similarly, tumorspheres can be generated from a single CSC. By transplanting spheroids and organoids into immune-deficient mice, patient-derived xenografts can serve as a preclinical model to test therapeutics in vivo. Although the handling and analysis of 3D tumor spheroids and organoids is more complex, it will provide insights into various cancer processes that cannot be provided by 2D culture. Here a short overview of 3D tumor systems as preclinical models is provided.

摘要三维(3D)癌症模型的生成是个性化药物和肿瘤特异性药物递送研究的一个新的和令人着迷的发展。除了经典的二维(2D)粘附细胞培养模型外,模拟癌症组织微环境的3D球体和类器官癌症模型正在成为一个重要的临床前模型系统。类似于癌症,3D癌症模型形成多种细胞-细胞和细胞-细胞外基质相互作用,并激活不同的细胞级联/途径,如增殖、静止、衰老和坏死或凋亡细胞死亡。此外,还可以分析基因变异和突变、细胞-细胞相互作用的微环境以及纳米医学中治疗剂和纳米颗粒的吸收。癌症干细胞(CSCs)的分析也很重要,CSCs可能在抗治疗和癌症复发中发挥关键作用。肿瘤球体可以由一种肿瘤衍生的细胞系或由两种或多种细胞系的共培养产生。肿瘤类器官可以来源于肿瘤,也可以由分化为癌组织多个方面的CSC产生。类似地,肿瘤球可以由单个CSC产生。通过将球体和类器官移植到免疫缺陷小鼠体内,患者来源的异种移植物可以作为临床前模型在体内测试治疗方法。尽管3D肿瘤球体和类器官的处理和分析更为复杂,但它将为2D培养所无法提供的各种癌症过程提供见解。这里提供了作为临床前模型的3D肿瘤系统的简短概述。
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引用次数: 0
Challenges and opportunities for modeling monogenic and complex disorders of the human retina via induced pluripotent stem cell technology. 通过诱导多能干细胞技术模拟人类视网膜单基因和复杂疾病的挑战和机遇
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2021-12-03 eCollection Date: 2021-09-01 DOI: 10.1515/medgen-2021-2092
Karolina Plössl, Andrea Milenkovic, Bernhard H F Weber

The human retina is a highly structured and complex neurosensory tissue central to perceiving and processing visual signals. In a healthy individual, the close interplay between the neuronal retina, the adjacent retinal pigment epithelium and the underlying blood supply, the choriocapillaris, is critical for maintaining eyesight over a lifetime. An impairment of this delicate and metabolically highly active system, caused by genetic alteration, environmental impact or both, results in a multitude of pathological phenotypes of the retina. Understanding and treating these disease processes are motivated by a marked medical need in young as well as in older patients. While naturally occurring or gene-manipulated animal models have been used successfully in ophthalmological research for many years, recent advances in induced pluripotent stem cell technology have opened up new avenues to generate patient-derived retinal model systems. Here, we explore to what extent these cellular models can be useful to mirror human pathologies in vitro ultimately allowing to analyze disease mechanisms and testing treatment options in the cell type of interest on an individual patient-specific genetic background.

摘要人类视网膜是一种结构高度复杂的神经感觉组织,以感知和处理视觉信号为中心。在健康的个体中,神经元视网膜、相邻的视网膜色素上皮和潜在的血液供应绒毛膜毛细血管之间的密切相互作用对于终身保持视力至关重要。由于基因改变、环境影响或两者兼而有之,这种脆弱且代谢高度活跃的系统受到损害,导致视网膜出现多种病理表型。了解和治疗这些疾病过程的动机是年轻和老年患者明显的医疗需求。尽管自然产生或基因操纵的动物模型已成功用于眼科研究多年,但诱导多能干细胞技术的最新进展为生成患者衍生的视网膜模型系统开辟了新的途径。在这里,我们探索了这些细胞模型在多大程度上有助于在体外反映人类病理,最终允许在个体患者特定的遗传背景下分析疾病机制并测试感兴趣的细胞类型的治疗方案。
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引用次数: 0
Cellular models of genetic diseases. 遗传疾病的细胞模型
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2021-12-03 eCollection Date: 2021-09-01 DOI: 10.1515/medgen-2021-2095
Matthias Rath, Ute Felbor
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引用次数: 0
Humangenetiker Stefan Mundlos erhält Mendel-Medaille der Leopoldina.
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2021-12-03 eCollection Date: 2021-09-01 DOI: 10.1515/medgen-2021-2088
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引用次数: 0
Cellular models and therapeutic perspectives in hypertrophic cardiomyopathy. 肥厚性心肌病的细胞模型和治疗前景
IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Pub Date : 2021-12-03 eCollection Date: 2021-09-01 DOI: 10.1515/medgen-2021-2094
Gökhan Yigit, Bernd Wollnik

Hypertrophic cardiomyopathy (HCM) is a clinically heterogeneous cardiac disease that is mainly characterized by left ventricular hypertrophy in the absence of any additional cardiac or systemic disease. HCM is genetically heterogeneous, inherited mainly in an autosomal dominant pattern, and so far pathogenic variants have been identified in more than 20 genes, mostly encoding proteins of the cardiac sarcomere. Based on its variable penetrance and expressivity, pathogenicity of newly identified variants often remains unsolved, underlining the importance of cellular and tissue-based models that help to uncover causative genetic alterations and, additionally, provide appropriate systems for the analysis of disease hallmarks as well as for the design and application of new therapeutic strategies like drug screenings and genome/base editing approaches. Here, we review the current state of cellular and tissue-engineered models and provide future perspectives for personalized therapeutic strategies of HCM.

摘要肥厚型心肌病(HCM)是一种临床异质性心脏病,其主要特征是在没有任何其他心脏或全身疾病的情况下左心室肥大。HCM是遗传异质性的,主要以常染色体显性遗传模式遗传,到目前为止,已经在20多个基因中发现了致病性变体,主要编码心肌肌节蛋白。基于其可变的外显率和表现力,新发现的变体的致病性通常仍未解决,这突出了基于细胞和组织的模型的重要性,这些模型有助于揭示致病基因改变,此外,为分析疾病特征以及设计和应用新的治疗策略(如药物筛选和基因组/碱基编辑方法)提供适当的系统。在这里,我们回顾了细胞和组织工程模型的现状,并为HCM的个性化治疗策略提供了未来的前景。
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引用次数: 0
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Medizinische Genetik
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