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Effects of elevation gradient and aspect on butterfly diversity on Galičica Mountain in the Republic of Macedonia (south–eastern Europe) 海拔梯度和坡向对东南欧马其顿共和国加利<e:1>卡山蝴蝶多样性的影响
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-12-23 DOI: 10.32800/abc.2021.44.0067
M. Popović, B. Micevski, R. Verovnik
The patterns of butterfly diversity and community changes in relation to elevation are an interesting and well–covered topic in ecology, but the effects of aspect have rarely been evaluated. Here we studied the changes in butterfly species richness and communities along the elevation gradient and aspect of Galičica Mountain. As expected, species richness changed with altitude, showing a bimodal pattern with two peaks and a declining trend towards higher altitude. Changes were well–correlated with the area in each altitudinal zone, while the effects of productivity were less clear. Butterfly communities at higher altitudes were the most distinct when grouped according to β diversity estimates, followed by mid– and low–altitude communities. Indicator species were found in mid–altitudes and for the combination of low–mid and mid–high altitudes, but not among aspects. Overall, aspect produced a less conclusive effect on species richness and community composition. South and north accounted for most of these differences despite dominant western and eastern and exposition of the mountain slopes. The community temperature index declined with altitude and on the northern aspect, showing these areas hosted more cold–adapted species. Notes on butterfly conservation are provided as 23 species known from historical surveys have not been recorded recently.Data published through GBIF (Doi: 10.15470/jacl7y).
蝴蝶多样性的模式和群落随海拔高度的变化是生态学中一个有趣且涵盖广泛的主题,但很少评估方面的影响。在这里,我们研究了蝴蝶物种丰富度和群落沿海拔梯度和加利奇卡山方向的变化。正如预期的那样,物种丰富度随着海拔高度的变化而变化,呈现双峰模式,并呈向高海拔下降的趋势。变化与每个海拔带的面积密切相关,而生产力的影响则不太明显。根据β多样性估计,高海拔地区的蝴蝶群落最为明显,其次是中海拔和低海拔地区。指示物种在中海拔地区以及中低海拔和中高海拔的组合中发现,但在各方面之间没有发现。总的来说,这一方面对物种丰富度和群落组成产生的决定性影响较小。南部和北部是这些差异的主要原因,尽管西部和东部占主导地位,山坡也很明显。群落温度指数随海拔高度和北侧而下降,表明这些地区拥有更多适应寒冷的物种。由于历史调查中已知的23种蝴蝶最近没有记录,因此提供了有关蝴蝶保护的说明。通过GBIF发布的数据(Doi:10.15470/jacl7y)。
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引用次数: 2
The importance of addressing different Red Lists in conservation studies: an analysis comparing the conservation status of Brazilian mammals 处理不同红色名录在保护研究中的重要性:巴西哺乳动物保护状况比较分析
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-12-18 DOI: 10.32800/abc.2021.44.0079
M. C. Drago, D. Vrcibradic
Red Lists are important conservation tools because they attempt to estimate the extinction risks of species. We compared the conservation status of Brazilian mammals presented in the Brazilian Red Book with those presented in the IUCN Red List, highlighting the importance of each list and why they should be used jointly. Out of 636 species, 181 were considered endemic to Brazil and 121 were considered threatened by at least one of the lists. Considering the complete database, 86 % of the species had the same status on both lists, whereas only 48 % of the threatened species had the same status. Some possible factors responsible for variations are the period in which the evaluations were carried out, the evaluation process and the fact that a species threatened nationally may not be threatened globally. We recommend that communication should be improved, that lists should be kept updated, and that both the type of information and the data itself to be used in the assessments should be standardized.
红色名录是重要的保护工具,因为它们试图估计物种的灭绝风险。我们比较了《巴西红皮书》和《世界自然保护联盟红色名录》中列出的巴西哺乳动物的保护状况,强调了每一份名录的重要性以及为什么应该联合使用它们。636个物种中,181个被认为是巴西特有物种,121个被认为至少受到其中一个名单的威胁。考虑到完整的数据库,86%的物种在两份名单上的地位相同,而只有48%的受威胁物种的地位相同。造成变异的一些可能因素是进行评估的时期、评估过程以及国家受到威胁的物种可能不会受到全球威胁的事实。我们建议,应改进沟通,不断更新清单,评估中使用的信息类型和数据本身都应标准化。
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引用次数: 1
Marginal presence of plastic in nests of yellow–legged gulls (Larus michahellis) in the southeastern Bay of Biscay 比斯开湾东南部黄腿鸥(Larus michahellis)巢中塑料的边缘存在
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-12-01 DOI: 10.32800/abc.2020.43.0191
S. Delgado, N. Zorrozua, J. Arizaga
Marginal presence of plastic in nests of yellow–legged gulls (Larus michahellis) in the southeastern Bay of Biscay. Nest entanglement and consumption of plastics can be a cause of mortality in chicks of various seabird species. As plastic debris may be chosen as a source of nesting material, evaluation of its presence and contribution to nest building in seabird colonies is important. Here, we determined the contribution of anthropogenic debris to nest construction by a yellow–legged gull Larus michahellis population that largely depends on refuse tips to forage. Two colonies within the southeastern Bay of Biscay, Spain, were sampled in 2019. One of the colonies was in Getaria, where no debris was found in nests, and the second was in Ulia, where 40 % of the nests had some kind of artificial material. In all cases, however, this debris comprised less than 5 % of the nests' area. Among the studied nests, we found one had a piece of fabric, five had pieces of rope, and 20 had pieces of flexible plastic packaging. These results contrast with other seabird species that face problems of conservation due to the increasing use of plastic for nesting. With the low prevalence of artificial debris (chiefly plastic) in nests found in this study, mortality due to debris entanglement or ingestion is unlikely.
比斯开湾东南部黄腿海鸥(Larus michahellis)巢穴中塑料的边缘存在。鸟巢缠绕和塑料消耗可能是导致各种海鸟雏鸟死亡的原因。由于塑料碎片可能被选为筑巢材料的来源,因此评估其在海鸟群落中的存在及其对筑巢的贡献非常重要。在这里,我们确定了人为碎片对黄腿海鸥Larus michahellis种群筑巢的贡献,该种群在很大程度上依赖垃圾堆觅食。2019年,对西班牙比斯开湾东南部的两个殖民地进行了采样。其中一个群落在Getaria,那里的巢穴中没有发现碎片,第二个群落在Ulia,那里40%的巢穴都有某种人造材料。然而,在所有情况下,这些碎片只占巢穴面积的不到5%。在研究的巢穴中,我们发现一个有一块织物,五个有绳子,20个有柔性塑料包装。这些结果与其他海鸟形成了鲜明对比,这些海鸟由于越来越多地使用塑料筑巢而面临保护问题。由于本研究中发现的巢穴中人工碎片(主要是塑料碎片)的发生率较低,因此不太可能因碎片缠绕或摄入而死亡。
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引用次数: 2
Preferencias de los granívoros con respecto al tamaño y la calidad de las bellotas en un bosque de Quercus en la zona centroseptentrional de México 在墨西哥中北部的栎树林中,食粒动物对橡子大小和质量的偏好
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-12-01 DOI: 10.32800/abc.2020.43.0197
A. Gamboa, F. Barragán
espanolLas bellotas del genero Quercusson muy apreciadas por diversos animales. Se ha cuestionado si la seleccion de una bellota puede depender de las caracteristicas intrinsecas del fruto. En este trabajo determinamos si el tamano y la calidad de las bellotas (sanas o danadas) influyen en su seleccion. Los resultados muestran que Q. affinisfue la especie con las bellotas mas grandes, pero con la tasa mas baja de seleccion, y que Q. eduardiitenia bellotas mas pequenas, pero con la tasa mas alta de seleccion. La seleccion la llevan a cabo dos grupos de vertebrados con periodos de actividad claramente separados. Los arrendajos Aphelocoma spp. realizaban su actividad de dia y los roedores Peromyscus spp., de noche. El tamano y la calidad solo representaron una influencia significativa en la seleccion de bellotas de Q. affinis. Nuestros resultados sugieren que la ausencia de animales grandes puede poner en riesgo el establecimiento de especies con bellotas grandes (como Q. affinis). EnglishAcorns of the species of the genus Quercus are highly appreciated by a diverse group of animals. It remains unclear whether the choice to move an acorn is related to the intrinsic characteristics of the fruit. In this work, we aimed to determine whether the size and quality of acorns (healthy or damaged) influenced their removal. We found that Q. affinis was the species with the largest acorns but the lowest removal rate, and Q. eduardii was the species with the smallest acorns but highest removal rates. Two groups of vertebrates carried out this removal, and this activity occurred at two clearly separate times. Jays Aphelocoma spp. carried out their activity during the day, and rodents Peromyscus spp. removed acorns at night. Size and quality only had a significant influence on the removal of Q. affinis. Our results suggest that absence of large animals could put the establishment of species with large acorns (such as Q. affinis) at risk.
Quercusson属的橡子,深受各种动物的喜爱。人们质疑橡子的选择是否取决于果实的内在特征。在本研究中,我们确定橡子的大小和质量(健康或受损)是否影响其选择。结果表明,该物种的亲和力最大,但选择率最低,而eduardiitenia的亲和力较小,但选择率最高。选择是由两组活动周期明显不同的脊椎动物进行的。松鼠在白天活动,啮齿动物在晚上活动。在本研究中,我们分析了两种不同类型的橡子的选择。我们的研究结果表明,大型动物的缺乏可能会威胁到大型橡子物种(如affinis)的建立。= =地理= =根据美国人口普查,该地区的总面积为,其中土地和(0.964平方公里)水。这仍然是一个举措是否the choice to move an acorn is related to the intrinsic水果的特征。在这项工作中,我们试图确定橡子的大小和质量(健康或损坏)是否影响其移除。We found that was the species with the largest q . affinis acorns but the最低removal rate was, and q . eduardii the species with the smallest acorns的but removal房费。= =地理= =根据美国人口普查,这个县的总面积为,其中土地和(0.984平方公里)水。= =地理= =根据美国人口普查,这个县的土地面积为。= =地理= =根据美国人口普查,这个县的总面积为,其中土地和(1.5%)水。Our成果suggest that of large动物可put the establishment of species with large acorns(如:q . affinis) at risk。
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引用次数: 0
Temporal changes in the diet of two sympatric carnivorous mammals in a protected area of south–central Chile affected by a mixed–severity forest fire 智利中南部保护区两种同域食肉哺乳动物饮食的时间变化受到混合严重程度森林火灾的影响
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-12-01 DOI: 10.32800/abc.2020.43.0177
A. Zúñiga, J. Rau, V. Fuenzalida, A. Fuentes-Ramirez
espanolEl fuego es un importante agente perturbador en varios ecosistemas de todo el mundo que puede afectar a la disponibilidad de recursos en una zona determinada, regulando la interaccion entre especies competidoras. Estudiamos la dieta del zorro culpeo (Lycalopex culpaeus) y el puma (Puma concolor) por dos anos consecutivos en un zona protegida del centro y el sur de Chile que se vio afectada por un incendio forestal. Se observaron diferencias significativas en el regimen alimentario de ambas especies, lo que pone de manifiesto su segregacion trofica. En los dos anos del estudio, la presa predominante del puma fue una especie exotica: la liebre europea (Lepus europaeus), lo que sugiere una simplificacion de su espectro trofico respecto a lo reportado en otras latitudes. Se analizan las consecuencias ecologicas de este hecho. EnglishFire is a significant disruptive agent in various ecosystems around the world. It can affect the availability of resources in a given area, modulating the interaction between competing species. We studied the diet of the culpeo fox (Lycalopex culpaeus) and cougar (Puma concolor) for two consecutive years in a protected area of southern–central Chile which was affected by a wildfire. Significant differences were observed in the dietary pattern between the two species, showing their trophic segregation. In the two years of the study, the predominant prey for cougar was an exotic species, the European hare (Lepus europaeus), implying a simplification of its trophic spectrum with respect to that reported in other latitudes. The ecological consequences related to this scenario are discussed.
西班牙火是世界各地许多生态系统的主要干扰因素,它可以影响特定地区的资源可用性,调节竞争物种之间的相互作用。在智利中部和南部受森林火灾影响的保护区,我们连续两年研究了culpeo fox (Lycalopex culpaeus)和puma concolor的饮食。在本研究中,我们观察到两个物种的饮食有显著差异,表明它们的营养分离。在两年的研究中,美洲狮的主要猎物是一种外来物种:欧洲野兔(Lepus europaeus),这表明与其他纬度报道的相比,美洲狮的营养谱有所简化。分析了这一事件的生态后果。英国火是世界各地各种生态系统的重要破坏者。它可以影响特定地区资源的可用性,调节竞争物种之间的相互作用。在智利中南部受野火影响的保护区,我们连续两年研究了culpeo fox (Lycalopex culpaeus)和cougar (Puma concolor)的饮食。这两个物种的饮食模式有显著差异,显示出它们的营养分离。In the two》of the study, predominant prey for美洲狮was an exotic species,欧洲野兔(Lepus europaeus) implying简化of its trophic累计In other纬度spectrum with respect to that。这一情景的生态后果正在讨论中。
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引用次数: 6
Towards high–throughput analyses of fecal samples from wildlife 迈向野生动物粪便样本的高通量分析
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-12-01 DOI: 10.32800/abc.2020.43.0271
C. Sarabia, I. Salado, A. Cornellas, A. Fernández-Gil, C. Vilà, J. Leonard
Towards high–throughput analyses of fecal samples from wildlife. High–throughput sequencing offers new possibilities in molecular ecology and conservation studies. However, its potential has not yet become fully exploited for noninvasive studies of free–ranging animals, such as those based on feces. High–throughput sequencing allows sequencing of short DNA fragments and could allow simultaneous genotyping of a very large number of samples and markers at a low cost. The application of high throughput genotyping to fecal samples from wildlife has been hindered by several labor–intensive steps. We evaluate alternative protocols which could allow higher throughput for two of these steps: sample collection and DNA extraction. Two different field sampling and seven different DNA extraction methods are tested here on grey wolf (Canis lupus) feces. There was high variation in genotyping success rates. The field sampling method based on surface swabbing performed much worse than the extraction from a fecal fragment. In addition, there is a lot of room for improvement in the DNA extraction step. Optimization of protocols can lead to very much more efficient, cheaper and higher throughput noninvasive monitoring. Selection of appropriate markers is still of paramount importance to increase genotyping success..
对野生动物粪便样本进行高通量分析。高通量测序为分子生态学和保护研究提供了新的可能性。然而,其潜力尚未被充分利用,用于自由放养动物的非侵入性研究,例如基于粪便的研究。高通量测序可以对短DNA片段进行测序,并可以以低成本同时对大量样本和标记物进行基因分型。高通量基因分型在野生动物粪便样本中的应用受到了几个劳动密集型步骤的阻碍。我们评估了可以为其中两个步骤提供更高吞吐量的替代方案:样本采集和DNA提取。两种不同的野外采样和七种不同的DNA提取方法在灰狼(犬狼疮)粪便上进行了测试。基因分型成功率差异很大。基于表面拭子的现场采样方法比从粪便碎片中提取的效果差得多。此外,在DNA提取步骤中还有很大的改进空间。协议的优化可以带来更高效、更便宜和更高吞吐量的无创监测。选择合适的标志物对提高基因分型成功率仍然至关重要。。
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引用次数: 3
Variation in winter thrush abundance during the hunting season in southern Europe: the importance of hunting–free reserves 南欧狩猎季节冬季画眉鸟数量的变化:无狩猎保护区的重要性
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-11-18 DOI: 10.32800/abc.2021.44.0059
L. Goni, S. González, D. Biescas, D. Villanúa, J. Arizaga
Variation in winter thrush abundance during the hunting season in southern Europe: the importance of hunting–free reserves. We analysed variations in the abundance of the song thrush (Turdus philomelos) and the blackbird (T. merula) in the hunting season in hunting areas and hunting–free reserves. After controlling for habitat, we found that the abundance of song thrushes (hunted species) was lower in hunting areas than in reserves during the hunting season. This effect was not found for the blackbird (non–hunted species). This finding indicates hunting–free reserves have a positive effect on song thrush conservation. Further research is crucial to determine the traits that should be promoted in this type of reserve in order to improve their efficiency.
南欧狩猎季节冬季画眉鸟数量的变化:无狩猎保护区的重要性。我们分析了狩猎季节在狩猎区和无狩猎保护区的歌画眉鸟(Turdus philomelos)和黑鸟(T.merula)数量的变化。在控制栖息地后,我们发现狩猎季节,狩猎区的歌画眉(被猎杀物种)丰度低于保护区。这种影响并没有在黑鸟(非狩猎物种)身上发现。这一发现表明,无狩猎保护区对歌画眉的保护有积极影响。进一步的研究对于确定应该在这类保护区中推广的性状以提高其效率至关重要。
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引用次数: 0
The impacts of domestic dogs (Canis familiaris) on wildlife in two Brazilian hotspots and implications for conservation 家犬对巴西两个热点地区野生动物的影响及其对保护的影响
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-11-16 DOI: 10.32800/abc.2021.44.0045
J. J. Guedes, C. L. Assis, R. Feio, F. M. Quintela
The impacts of domestic dogs (Canis familiaris) on wildlife in two Brazilian hotspots and implications for conservation. Exotic species are major threats to biodiversity worldwide. Domestic dogs (Canis familiaris) are among the most common invasive predators in the world, interacting with wildlife in many ways. We present ecological data based on camera traps and occasional observations of free–roaming domestic dogs from localities within the Brazilian Atlantic forest and Cerrado hotspots. Canis familiaris was the second most abundant mammal species, and the most abundant carnivore. Dogs chased, killed, and/or competed with at least 26 native species. They consumed none of the killed animals, which together with the predominant records of solitary individuals acting during the daytime indicates they are mainly free–roaming dogs relying on humans for food and shelter. The high numbers of dogs and the wide range of prey suggest wildlife could be greatly impacted by domestic dogs, especially in areas that are highly threatened by anthropogenic activities, such as biodiversity hotspots. We highlight possible measures (such as the eradication or removal of dogs from natural areas) that could help to reduce the environmental damage caused by domestic dogs in the region.
家犬(Canis familyaris)对巴西两个热点地区野生动物的影响以及对保护的影响。外来物种是世界范围内生物多样性的主要威胁。家犬(Canis familyaris)是世界上最常见的入侵性捕食者之一,以多种方式与野生动物互动。我们提供了基于相机陷阱和偶尔观察到的来自巴西大西洋森林和塞拉多热点地区的自由漫游家狗的生态数据。家犬是数量第二丰富的哺乳动物,也是数量最多的食肉动物。狗追逐、杀死和/或与至少26种本土物种竞争。它们没有吃掉任何被杀死的动物,再加上白天单独行动的主要记录表明,它们主要是自由漫步的狗,依靠人类提供食物和住所。大量的狗和广泛的猎物表明,野生动物可能会受到家养狗的巨大影响,尤其是在生物多样性热点等受到人类活动高度威胁的地区。我们强调了可能采取的措施(如将狗从自然区域根除或清除),这些措施有助于减少该地区家养狗对环境造成的破坏。
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引用次数: 8
Nestedness structure of bird assemblages in a fragmented forest in Central Argentina: the role of selective extinction and colonization processes 阿根廷中部破碎森林中鸟类组合的筑巢结构:选择性灭绝和殖民化过程的作用
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-10-29 DOI: 10.32800/abc.2021.44.0017
S. Dardanelli, M. Bellis
Nestedness structure of bird assemblages in a fragmented forest in Central Argentina: the role of selective extinction and colonization processes. Nestedness analysis constitutes an important tool to understand the processes that shape wildlife communities. It also allows a quick first evaluation of species extinction proneness in fragmented landscapes. Here, we tested whether avian assemblages in the fragmented Espinal forest exhibited nested subset patterns. Furthermore, we examined whether selective extinction or selective colonization are driving nested subset patterns. We studied avian assemblages in 13 forest fragments in central Argentina during breeding and non–breeding seasons. We completed partial Spearman rank correlations to explore the relationship between nestedness rank order and habitat patch variables and species life history traits related to species extinction proneness and colonization rate. Bird species showed strong nestedness patterns, both for the total incidence matrix and for forest fragments and species separately. Nestedness patterns were similar during the breeding and non–breeding seasons. The nested rank order of forest fragments correlated with area and distance to nearest fragment, both of which are patch characteristics known to increase the probabilities of species extinction. The nested rank order of species was correlated with the minimum area of species requirement, trophic guild, and range size, traits that are linked to extinction risk. Selective extinction processes rather than selective colonization appear to be driving nestedness patterns of bird assemblages in fragmented Espinal forest. The most effective way to preserve forest bird species in the Espinal forest seems to be by protecting the larger fragments of this relictual forest.
阿根廷中部破碎森林中鸟类组合的筑巢结构:选择性灭绝和殖民化过程的作用。巢性分析是了解野生动物群落形成过程的重要工具。它还允许对破碎景观中的物种灭绝倾向进行快速的首次评估。在这里,我们测试了鸟类组合在破碎的埃斯皮纳尔森林中是否表现出嵌套的子集模式。此外,我们研究了是否选择性灭绝或选择性殖民化驱动嵌套子集模式。本文研究了阿根廷中部13个森林片段在繁殖期和非繁殖期的鸟类群落特征。通过部分Spearman秩相关分析,探讨巢性秩顺序与生境斑块变量、物种生活史特征与物种灭绝倾向和定植率之间的关系。无论在总关联矩阵上,还是在森林碎片和物种上,鸟类都表现出强烈的筑巢模式。巢型在繁殖期和非繁殖期相似。森林碎片的嵌套等级顺序与面积和与最近碎片的距离相关,这两者都是已知的增加物种灭绝概率的斑块特征。物种的筑巢等级顺序与物种所需的最小面积、营养行会和范围大小相关,这些特征与灭绝风险有关。在支离破碎的埃斯皮纳尔森林中,鸟类的筑巢模式似乎是由选择性灭绝过程而非选择性定植驱动的。保护埃斯皮纳尔森林鸟类最有效的方法似乎是保护这片宗教森林的大块区域。
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引用次数: 5
Evaluación de un protocolo automatizado para la obtención de medidas morfométricas de huevos de aves a partir de fotografías digitales 从数字照片中获得禽蛋形态测量的自动化协议的评估
IF 0.9 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION Pub Date : 2020-10-22 DOI: 10.32800/abc.2021.44.0031
V. M. Ramírez-Arrieta, D. Denis, Y. Ferrer-Sánchez
Evaluation of a protocol for automated extraction of morphometric measurements from avian eggs using digital photographyAs many ecomorphological studies are limited by the time required to gather manual measurement data, automatizing the process is an important focus of methodological innovations. We developed, implemented and validated a protocol for the semi–automated extraction of a set of morphometric variables of egg size and shape from digital pictures. The protocol was implemented in R language as a web app called OvometriK. After binarizing and calibrating images, this protocol uses geometric and trigonometric functions to calculate eleven egg variables. We tested calculations in several ways, assuming contour continuity or using voxel counts. Application was validated with geometric shapes and 30 manually–measured chicken eggs. Mathematical validation with spheres showed that the algorithm provided high precision diameter measures, with a correlation of 99.9 %. Average estimation error was 1.4 %. The mathematical volume estimation was underestimated by 27 %, while voxels were underestimated by only 6 %. Differences between manual egg measurements of diameters and those obtained from images was less than 3 mm (4 %). Correlation between estimated volume and measured by silica gel filling was higher than 90 % using the voxel count method. Neither inclination angle or picture resolution had significant effects on precision (3.2 % maximum difference). Measures showed high repeatability and represent a significant saving in processing time. This new protocol represents an improvement on previous programs regarding limitations of platform, accessibility and number of variables. Furthermore, its flexibility and openness means it can be adapted to other specific applications.
评估使用数字摄影从禽蛋中自动提取形态测量数据的方案由于许多生态形态研究受到收集手动测量数据所需时间的限制,自动化过程是方法创新的一个重要重点。我们开发、实施并验证了一种协议,用于从数字图片中半自动提取一组鸡蛋大小和形状的形态计量变量。该协议是用R语言作为一个名为OvometriK的网络应用程序实现的。在对图像进行二值化和校准后,该协议使用几何和三角函数来计算11个鸡蛋变量。我们以几种方式测试了计算,假设轮廓连续性或使用体素计数。应用程序通过几何形状和30个手动测量的鸡蛋进行了验证。球体的数学验证表明,该算法提供了高精度的直径测量,相关性为99.9 %. 平均估计误差为1.4 %. 数学体积估计被低估了27 %, 而体素只被低估了6 %. 人工测量卵子直径与从图像中获得的直径之间的差异小于3毫米(4 %). 估计体积与通过硅胶填充测量的体积之间的相关性高于90 % 使用体素计数方法。倾角或图片分辨率对精度都没有显著影响(3.2 % 最大差值)。测量结果显示出很高的重复性,并显著节省了处理时间。这个新协议在平台、可访问性和变量数量方面对以前的程序进行了改进。此外,它的灵活性和开放性意味着它可以适应其他特定的应用。
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Animal Biodiversity and Conservation
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