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Silence of Synaptotagmin VII inhibits release of dense core vesicles in PC12 cells. Synaptotagmin VII沉默抑制PC12细胞致密核囊泡的释放。
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-009-0160-y
JiangLi Li, Yang Xiao, Wei Zhou, ZhengXing Wu, RongYing Zhang, Tao Xu

Synaptotagmin VII (Syt VII), which has a higher Ca(2+) affinity and slower disassembly kinetics with lipid than Syt I and Syt IX, was regarded as being uninvolved in synaptic vesicle (SV) exocytosis but instead possibly as a calcium sensor for the slower kinetic phase of dense core vesicles (DCVs) release. By using high temporal resolution capacitance and amperometry measurements, it was demonstrated that the knockdown of endogenous Syt VII attenuated the fusion of DCV with the plasma membrane, reduced the amplitude of the exocytotic burst of the Ca(2+)-triggered DCV release without affecting the slope of the sustained component, and blocked the fusion pore expansion. This suggests that Syt VII is the Ca(2+) sensor of DCV fusion machinery and is an essential factor for the establishment and maintenance of the pool size of releasable DCVs in PC12 cells.

Synaptotagmin VII (Syt VII)具有比Syt I和Syt IX更高的Ca(2+)亲和力和更慢的脂质分解动力学,被认为与突触囊泡(SV)胞外作用无关,而可能是致密核心囊泡(DCVs)释放较慢动力学阶段的钙传感器。通过高时间分辨率电容和安培测量,结果表明,内源性Syt 7的敲低减弱了DCV与质膜的融合,降低了Ca(2+)触发的DCV释放的胞外爆发幅度,而不影响持续组分的斜率,并阻断了融合孔的扩张。这表明Syt VII是DCV融合机制的Ca(2+)传感器,是PC12细胞中可释放DCV池大小建立和维持的重要因素。
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引用次数: 10
Expression of hIGF-I in the silk glands of transgenic silkworms and in transformed silkworm cells. 转基因家蚕丝腺及转化家蚕细胞中higf - 1的表达。
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-009-0148-7
Yue Zhao, Xi Li, GuangLi Cao, RenYu Xue, ChengLiang Gong

To express human insulin-like growth factor-I (hIGF-I) in transformed Bombyx mori cultured cells and silk glands, the transgenic vector pigA3GFP-hIGF-ie-neo was constructed with a neomycin resistance gene driven by the baculovirus ie-1 promoter, and with the hIGF-I gene under the control of the silkworm sericin promoter Ser-1. The stably transformed BmN cells expressing hIGF-I were selected by using the antibiotic G418 at a final concentration of 700-800 microg/mL after the BmN cells were transfected with the piggyBac vector and the helper plasmid. The specific band of hIGF-I was detected in the transformed cells by Western blot. The expression level of hIGF-I, determined by ELISA, was about 7800 pg in 5x10(5) cells. Analysis of the chromosomal insertion sites by inverse PCR showed that exogenous DNA could be inserted into the cell genome randomly or at TTAA target sequence specifically for piggyBac element transposition. The transgenic vector pigA3GFP-hIGF-ie-neo was transferred into the eggs using sperm-mediated gene transfer. Finally, two transgenic silkworms were obtained after screening for the neo and gfp genes and verified by PCR and dot hybridization. The expression level of hIGF-I determined by ELISA was about 2440 pg/g of silk gland of the transgenic silkworms of the G1 generation.

为了在转化家蚕培养细胞和蚕丝腺中表达人胰岛素样生长因子-i (human insulin-like growth factor-I, hIGF-I),以杆状病毒ie-1启动子驱动的新霉素耐药基因和家蚕丝胶蛋白Ser-1启动子调控的hIGF-I基因为载体,构建了pigA3GFP-hIGF-ie-neo转基因载体。用piggyBac载体和辅助质粒转染BmN细胞后,用终浓度为700-800 μ g/mL的抗生素G418选择稳定转化的表达hIGF-I的BmN细胞。Western blot检测转染细胞中hIGF-I的特异条带。ELISA检测,5 × 10(5)个细胞中,hIGF-I的表达量约为7800 pg。逆转录PCR对染色体插入位点的分析表明,外源DNA可以随机插入细胞基因组中,也可以在TTAA靶序列上特异性插入piggyBac元件转位。通过精子介导的基因转移将转基因载体pigA3GFP-hIGF-ie-neo转移到卵子中。最后,通过筛选neo和gfp基因,并进行PCR和点杂交验证,获得了2只转基因家蚕。ELISA法测定G1代转基因家蚕蚕丝腺中hIGF-I的表达量约为2440 pg/g。
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引用次数: 30
Temporal allocation of metabolic tolerance in the body of beet armyworm in response to three gossypol-cotton cultivars. 甜菜粘虫对三个棉棉品种代谢耐受性的时间分配。
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-009-0157-6
Gang Wu, Marvin K Harris, JianYing Guo, FangHao Wan

The nutrient composition and enzyme activities in larvae of the beet armyworm, Spodoptera exigua (Hübner), fed on high, medium or low gossypol cotton cultivars were examined at different time intervals. Significantly lower free fatty acid was observed in larvae fed for 6 h on high gossypol 'M9101' compared to larvae fed on the low (ZMS13) and intermediate (HZ401) gossypol cultivars. Significantly higher trypsin activity was observed in larvae fed on high gossypol 'M9101' for 24 h compared to those fed for 1, 4 and 6 h. Significantly higher catalase and total superoxide dismutase enzyme activities were observed in larvae of S. exigua fed on high gossypol 'M9101' compared with low gossypol cultivars 'ZMS13' and 'HZ401' for 1, 4, 6 and 24 h. However, significantly lower carboxylesterase and acetylcholinesterase enzyme activities were found in larvae fed on high gossypol 'M9101' compared with the other cultivars for 1, 4, 6 and 24 h. The interaction between cotton variety and beet armyworm infestation time significantly affected the carboxylesterase enzyme activity in S. exigua. The characterization of the effects of plant allelochemicals on herbivorous larvae is important for aiding understanding of plant-insect interaction as well as in devising solutions to pest problems by breeding plant resistance, identifying metabolic targets for insecticide development, etc.

研究了不同时间间隔取食高、中、低棉酚品种的甜菜粘虫(Spodoptera exigua, h bner)幼虫的营养成分和酶活性。饲喂高棉酚品种‘M9101’6 h的幼虫游离脂肪酸显著低于饲喂低(ZMS13)和中(HZ401)棉酚品种的幼虫。饲喂高棉酚‘M9101’24 h时,胰蛋白酶活性显著高于饲喂1、4和6 h时的胰蛋白酶活性;饲喂高棉酚‘M9101’1、4、6和24 h时,超过氧化氢酶和总超氧化物歧化酶活性显著高于饲喂低棉酚品种‘ZMS13’和‘HZ401’。高棉酚‘M9101’取食1、4、6和24 h后,甜菜夜蛾羧酸酯酶和乙酰胆碱酯酶活性显著低于其他品种。棉花品种和甜菜夜蛾取食时间的互作显著影响甜菜夜蛾羧酸酯酶活性。研究植物化感物质对草食性幼虫的影响,对于了解植物与昆虫的相互作用,以及通过培育植物抗性、确定杀虫剂开发的代谢靶点等来设计害虫问题的解决方案具有重要意义。
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引用次数: 5
Phylogeographic analysis of human papillomavirus 58. 人乳头瘤病毒58的系统地理学分析
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-009-0149-6
YanYun Li, ZuoFeng Li, YiFeng He, Yu Kang, XiaoYan Zhang, MingJun Cheng, Yang Zhong, CongJian Xu

Human papillomavirus 58 (HPV58) is one type of HPV with high risk of causing cervical cancer. Unusually high prevalence of HPV58 has been reported in Asia, Africa and some other areas. However, due to the scattered distribution of global data, in addition to the lack of data of some HPV58 high-incidence nations and regions, like Mainland China, a comprehensive analysis of the global geographical distribution of HPV58 remains blank so far. In this study, HPV58 from the human cervical cancer tissue was detected in Mainland China, and 14 new HPV58-E6/L1 gene sequences were obtained. Moreover, phylogeographic analysis has been conducted combining the HPV58 sequences that have been deposited in GenBank since 1985. The study result shows that the sequences detected from the Shanghai, Jiangsu and Sichuan areas are homologous with those found in the past from Hong Kong and Xi'an, China, as well as Japan and other Southeast Asian areas. Furthermore, Western Africa is considered to be the "root" source of the HPV58 variant, while Mainland China and Southeast Asia are "transit points" and the new sources of HPV58 after receiving the isolates from the "root" source; like HPV16 and HPV18, the HPV58 might also be one of the major HPV types associated with the development and spread of cervical cancer.

人乳头瘤病毒58 (HPV58)是一种高危的人乳头瘤病毒,可引致子宫颈癌。据报道,HPV58在亚洲、非洲和其他一些地区的流行率异常高。然而,由于全球数据分布较为分散,加之中国大陆等部分HPV58高发国家和地区缺乏数据,目前对HPV58全球地理分布的综合分析仍是空白。本研究在中国大陆地区从人宫颈癌组织中检测到HPV58,获得14条新的HPV58- e6 /L1基因序列。此外,结合1985年以来储存在GenBank中的HPV58序列进行了系统地理分析。研究结果表明,从上海、江苏和四川地区检测到的序列与过去在中国香港、西安以及日本等东南亚地区检测到的序列同源。此外,西非被认为是HPV58变异的“根”源,而中国大陆和东南亚是“中转站”和从“根”源接收分离物后的HPV58新来源;与HPV16和HPV18一样,HPV58也可能是与宫颈癌发展和扩散相关的主要HPV类型之一。
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引用次数: 7
Mechanisms of microRNA-mediated gene regulation. microrna介导的基因调控机制。
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-009-0152-y
Shuang Zhao, Mo-Fang Liu

microRNAs (miRNAs) are identified as a class of non-protein regulators and a new source for broad control of gene expression in eukaryotes. The past years have witnessed substantial progress in understanding miRNA functions and mechanisms, although a few controversies remain. Various hypotheses and models have been suggested for the mechanisms of miRNA repression, including translational inhibition at the level of initiation or elongation, rapid degradation of the nascent peptide, mRNA degradation, and mRNA sequestration into P bodies (processing bodies) and SGs (stress granules) for degradation or/and storage. Recently, some noncanonical miRNA regulation, such as miRNA activation and de-repression of miRNA inhibition, have been uncovered. This review discusses some recent advances about how miRNAs regulate their targets and various modes of miRNA function.

microRNAs (miRNAs)被认为是一类非蛋白质调控因子,是真核生物广泛调控基因表达的新来源。过去几年,在理解miRNA的功能和机制方面取得了实质性进展,尽管仍存在一些争议。关于miRNA抑制的机制,人们提出了各种假设和模型,包括起始或延伸水平的翻译抑制、新生肽的快速降解、mRNA降解以及mRNA被隔离到P体(加工体)和SGs(应激颗粒)中降解或储存。最近,一些非规范的miRNA调控,如miRNA激活和miRNA抑制的去抑制,已经被发现。本文综述了近年来有关miRNA调控靶点的研究进展以及miRNA的各种功能模式。
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引用次数: 43
The three-dimensional structure of Infectious flacherie virus capsid determined by cryo-electron microscopy. 用低温电子显微镜测定感染性裂孔病毒衣壳的三维结构。
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-009-0151-z
Li Xie, QinFen Zhang, XingMeng Lu, XinHong Dai, KunPeng Li, Jian Hong, XuePing Zhou

Cryo-electron microscopy and image reconstruction were used to determine the three-dimensional structure of Infectious flacherie virus (IFV). 5047 particles were selected for the final reconstruction. The FSC curve showed that the resolution of this capsid structure was 18 A. The structure is a psuedo T=3 (P=3) icosahedral capsid with a diameter of 302.4 A and a single shell thickness of 15 A. The density map showed that IFV has a smooth surface without any prominent protrude or depression. Comparison of the IFV structure with those of the insect picorna-like virus-Cricket paralysis virus (CrPV)and human picornavirus-Human rhinovirus 14 (HRV 14) revealed that the IFV structure resembles the CrPV structure. The "Rossmann canyon" is absent in both IFV and CrPV particles. The polypeptide topology of IFV VP2, IFV VP3 was predicted and the subunit location at the capsid surface was further analyzed.

采用低温电子显微镜和图像重建技术确定了感染性裂口病毒(IFV)的三维结构。最终选择5047个粒子进行重建。FSC曲线显示该衣壳结构的分辨率为18 A。该结构为伪T=3 (P=3)二十面体衣壳,其直径为302.4 a,单壳厚度为15 a。密度图显示IFV表面光滑,无明显的凸起或凹陷。与昆虫小核糖核酸样病毒-蟋蟀麻痹病毒(CrPV)和人小核糖核酸病毒-人鼻病毒14 (HRV 14)的结构比较发现,IFV的结构与CrPV的结构相似。在IFV和CrPV粒子中均不存在“罗斯曼峡谷”。预测了IFV VP2、IFV VP3的多肽拓扑结构,并进一步分析了其在衣壳表面的亚基位置。
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引用次数: 5
Tissue and host tropism of influenza viruses: importance of quantitative analysis. 流感病毒的组织和宿主趋向性:定量分析的重要性。
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-009-0161-x
Hong Zhang

It is generally accepted that human influenza viruses preferentially bind to cell-surface glycoproteins/glycolipids containing sialic acids in alpha2,6-linkage; while avian and equine influenza viruses preferentially bind to those containing sialic acids in alpha2,3-linkage. Even though this generalized view is accurate for H3 subtype isolates, it may not be accurate and absolute for all subtypes of influenza A viruses and, therefore, needs to be reevaluated carefully and realistically. Some of the studies published in major scientific journals on the subject of tissue tropism of influenza viruses are inconsistent and caused confusion in the scientific community. One of the reasons for the inconsistency is that most studies were quantitative descriptions of sialic acid receptor distributions based on lectin or influenza virus immunohistochemistry results with limited numbers of stained cells. In addition, recent studies indicate that alpha2,3- and alpha2,6-linked sialic acids are not the sole receptors determining tissue and host tropism of influenza viruses. In fact, determinants for tissue and host tropism of human, avian and animal influenza viruses are more complex than what has been generally accepted. Other factors, such as glycan topology, concentration of invading viruses, local density of receptors, lipid raft microdomains, coreceptors or sialic acid-independent receptors, may also be important. To more efficiently control the global spread of pandemic influenza such as the current circulating influenza A H1N1, it is crucial to clarify the determinants for tissue and host tropism of influenza viruses through quantitative analysis of experimental results. In this review, I will comment on some conflicting issues related to tissue and host tropism of influenza viruses, discuss the importance of quantitative analysis of lectin and influenza virus immunohistochemistry results and point out directions for future studies in this area, which should lead to a better understanding of tissue and host tropism of influenza viruses.

一般认为,人类流感病毒优先结合细胞表面糖蛋白/含有唾液酸的α 2,6-连锁糖脂;而禽流感和马流感病毒优先与含有唾液酸的α 2,3连锁结合。尽管这种广义观点对H3亚型分离株是准确的,但它可能对所有甲型流感病毒亚型都不准确和绝对,因此,需要仔细和现实地重新评估。在主要科学期刊上发表的一些关于流感病毒组织趋向性的研究不一致,在科学界引起了混乱。不一致的原因之一是,大多数研究是基于凝集素或流感病毒免疫组化结果定量描述唾液酸受体分布,染色细胞数量有限。此外,最近的研究表明,α 2,3-和α 2,6-链唾液酸并不是决定流感病毒组织和宿主趋向性的唯一受体。事实上,人类、禽流感和动物流感病毒的组织和宿主倾向的决定因素比人们普遍认为的要复杂得多。其他因素,如聚糖拓扑结构、入侵病毒的浓度、受体的局部密度、脂筏微结构域、辅助受体或唾液酸非依赖性受体,也可能很重要。为了更有效地控制当前流行的甲型H1N1流感等大流行性流感的全球传播,通过对实验结果的定量分析,阐明流感病毒组织和宿主趋向性的决定因素至关重要。本文就流感病毒的组织性和宿主性相关的一些相互矛盾的问题进行综述,讨论凝集素定量分析和流感病毒免疫组化结果的重要性,并指出该领域未来的研究方向,从而更好地了解流感病毒的组织性和宿主性。
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引用次数: 22
Progress in miRNA target prediction and identification. miRNA靶点预测与鉴定研究进展。
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-009-0159-4
Wei Xia, GuoJun Cao, NingSheng Shao

Recently, the identification of miRNA targets has received much attention. The strategies to determine miRNA targets include bioinformatic prediction and experimental assays. The bioinformatic prediction methods are mainly based on the confirmed rules of interaction between miRNAs and their targets, and are carried out by programs, such as miRanda, TargetScan, TargetScanS, RNAhybrid, DIANA-microT, PicTar, RNA22 and FindTar, which follow well-known principles. The experimental assays to find miRNA targets employ immunoprecipitation of AGO proteins to identify interacting mRNAs, or the analysis of mRNA or protein levels to identify genes which can be regulated by miRNAs. The improvement of current bioinformatic and experimental assays and the development of novel assays will enable greater efficiency in the identification of miRNA targets and thus facilitate miRNA research. This paper describes progress in the prediction and identification of miRNA targets.

近年来,miRNA靶点的鉴定备受关注。确定miRNA靶点的策略包括生物信息学预测和实验分析。生物信息学预测方法主要基于mirna与靶标之间确定的相互作用规律,采用miRanda、TargetScan、TargetScanS、RNAhybrid、DIANA-microT、PicTar、RNA22和FindTar等程序,遵循众所周知的原理进行预测。寻找miRNA靶点的实验分析采用AGO蛋白的免疫沉淀来鉴定相互作用的mRNA,或分析mRNA或蛋白水平来鉴定可被miRNA调节的基因。现有生物信息学和实验分析方法的改进以及新型分析方法的开发将使miRNA靶点的鉴定效率更高,从而促进miRNA的研究。本文综述了miRNA靶点的预测和鉴定进展。
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引用次数: 43
Characterization of interspecific hybrids and backcross progenies from a cross between Oryza minuta and Oryza sativa. 米与米的种间杂交种及回交后代的特性。
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-008-0155-0
SiBin Guo, FaLan Qin, DuanPin Zhang, XingHua Lin

Oryza minuta, a tetraploid wild relative of cultivated rice, is an important source for the genetic improvement. Interspecific hybrids were obtained from the cross of O. sativa L. (IR24) and O. minuta (Acc. No. 101133) with 5.58% crossability, which ranged from 0.11% to 1.62% in the backcross generations. The chromosome numbers of the backcross progenies were 24 to 48. Seven yield-related traits of the parents, hybrid F(1), and backcross progenies were evaluated. Simple sequence repeat markers analysis showed that the polymorphism ratio of SSR bands between IR24 and Acc. No. 101133 was 93.2%. The average donor segment number, length, donor genome size, and percentage of donor genome of 92 BC(3)F(1) plants (2n=24) were 24.1, 17.8 cM, 438.4 cM and 26.2%, respectively. They were complex variation and uneven among the chromosomes. These introgression lines could be used to identify the favorable genes of O. minuta and provide a new platform for the genetic improvement of cultivated rice.

米塔(Oryza minuta)是栽培水稻的四倍体野生近缘种质,是重要的遗传改良资源。用IR24与Acc杂交获得了种间杂种。代交率为5.58%,回交代交率为0.11% ~ 1.62%。回交后代的染色体数为24 ~ 48。对亲本、杂种F(1)和回交后代的7个产量相关性状进行了评价。简单序列重复标记分析表明,IR24与Acc之间的SSR频带多态性比率较高。第101133号为93.2%。92 BC(3)F(1)株(2n=24)的平均供体片段数、长度、供体基因组大小和供体基因组百分比分别为24.1%、17.8 cM、438.4 cM和26.2%。它们是复杂变异和不均匀的染色体。这些基因渐渗系可用于鉴别稻的有利基因,为栽培稻的遗传改良提供新的平台。
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引用次数: 8
Expression of the difference between the Cold (Han) and Hot (Re) natures of traditional Chinese medicines (Strobal and Rhubarb) based on the cold/hot plate differentiating assay. 基于冷/热板鉴别试验的中药(黄芪、大黄)寒性与热性差异表达
Pub Date : 2009-12-01 Epub Date: 2009-12-17 DOI: 10.1007/s11427-008-0154-1
HaiPing Zhao, YanLing Zhao, JiaBo Wang, HanBing Li, YongShen Ren, CanPing Zhou, Dan Yan, XiaoHe Xiao

In this study, objective differences between the Cold (Han) and Hot (Re) nature of traditional Chinese medicines, e.g. Strobal and Rhubarb, are determined by using a cold/hot plate differentiation technology. A novel, self-designed cold/hot plate differentiating instrument, with methodological study, was used to investigate the intervention of Strobal and Rhubarb on the temperature tropism of mice. Compared with the ICR and BALB/c mice, it was found that KM mice on the cold/hot plate were more sensitive to the change of temperature, within the tolerant temperature range of 15-40 degrees C. The temperature tropism behavior of mice is influenced by treatment with Rhubarb and Strobal, as is the activity of ATPase in liver tissue. These trends are consistent with the definition of the Cold/Hot nature of Chinese medicines based on traditional Chinese medicinal theory. This study showed that the differences of the Cold/Hot nature of traditional Chinese medicines. might be objectively represented by the temperature tropism of animal by means of cold/hot differentiating assay.

本研究采用冷热板鉴别技术,对中药如黄芪、大黄的寒(汉)性和热(热)性进行客观区分。本研究采用自行设计的冷热板鉴别仪,通过方法学研究,探讨大黄、黄芪对小鼠体温倾向的干预作用。与ICR和BALB/c小鼠相比,我们发现冷/热板上的KM小鼠对温度的变化更为敏感,在15-40℃的耐受温度范围内,小鼠的温度趋向性行为受到大黄和苦参黄的影响,肝组织中atp酶的活性也受到影响。这些趋势与传统中医理论对中药寒/热性质的定义是一致的。本研究表明,中药寒热性质的差异。可以通过冷热分化实验客观地表征动物的体温倾向。
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引用次数: 13
期刊
Science in China. Series C, Life Sciences / Chinese Academy of Sciences
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