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Tramadol Influences Cellular Metabolism and Autophagy in Germ and Sertoli Cells; Exercise Training as A Potential Ameliorative Strategy. 曲马多影响萌芽细胞和肥大细胞的细胞代谢和自噬;运动训练是一种潜在的改善策略。
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-08-11 DOI: 10.22074/cellj.2024.2024852.1532
Majid Rohani, Javad Tolouei Azar, Mazdak Razi, Asghar Tofighi

Objective: Dysregulation of lipid and carbohydrate/fatty acid (FA) balance in Sertoli and germ cells alters the NADP+/ NADPH ratio, resulting in metabolic autophagy in testicles. Tramadol (TRA) adversely affects spermatogenesis development, and it is not reversed within short periods of time after withdrawal. Therefore, the present study aimed to examine the boosting effect of different exercise training protocols (ETPs) on TRA-induced detrimental effects after withdrawal.

Materials and methods: In this experimental study, 36 mature Wistar rats were separated into control and TRAsole (administered 40 mg/kg of TRA and euthanized 60 days after TRA administration), Con-TRA (stopped TRA administration after 60 days, and continued for additional 60 days after withdrawal), TRA+low-intensity (TRA+LICT), TRA+ moderate-intensity (TRA+MICT), and TRA+high-intensity continuous (TRA+HICT) ETPs-induced groups (n=6/ group, ETPs were initiated for 60 days after stopping TRA administration). Next, the intracytoplasmic carbohydrate and lipids/FAs content, testicular lactate and lactate dehydrogenase (LDH) levels, relative ratios of NADP+/NADPH, serum testosterone levels, and the Leydig cells steroidogenic activity, the mRNA levels of Beclin-1, p62, LC3-I, and Atg7 as well as the LC3-I/II+ germ and somatic cells mean distributions were analyzed.

Results: The LICT and MICT could ameliorate the TRA-induced carbohydrates/lipids, FAs imbalance, increase lactate, LDH and testosterone levels, re-balance the NADP+/NADPH ratio, and reregulate the autophagy and steroidogenic activities in the Leydig and Sertoli cells.

Conclusion: Collectively, LICT and MICT can ameliorate the TRA-induced metabolic-oxidative autophagy by rebalancing energy survey in testicles and down-regulating autophagy reactions in Sertoli cells and rebalancing it in the Leydig cells.

目的塞尔托利细胞和生殖细胞中的脂质和碳水化合物/脂肪酸(FA)平衡失调会改变NADP+/ NADPH的比例,导致睾丸中的新陈代谢自噬。曲马多(TRA)对精子发生发育有不利影响,且停药后短期内无法逆转。因此,本研究旨在探讨不同运动训练方案(ETPs)对停药后曲马多诱导的有害影响的促进作用:在这项实验研究中,36 只成熟的 Wistar 大鼠被分为对照组和 TRAsole(给予 40 毫克/千克的 TRA,并在给予 TRA 60 天后安乐死)、Con-TRA(60 天后停止给予 TRA、60天后继续给药)、TRA+低强度组(TRA+LICT)、TRA+中等强度组(TRA+MICT)和TRA+高强度持续组(TRA+HICT)ETPs诱导组(n=6/组,停止TRA给药60天后开始ETPs)。接着,分析了细胞质内碳水化合物和脂质/脂肪酸含量、睾丸乳酸和乳酸脱氢酶(LDH)水平、NADP+/NADPH的相对比率、血清睾酮水平、Leydig细胞的类固醇生成活性、Beclin-1、p62、LC3-I和Atg7的mRNA水平以及LC3-I/II+生殖细胞和体细胞的平均分布:结果:LICT和MICT可改善TRA诱导的碳水化合物/脂类、FAs失衡,提高乳酸、LDH和睾酮水平,重新平衡NADP+/NADPH比率,并重新调节Leydig和Sertoli细胞的自噬和类固醇生成活性:总而言之,LICT和MICT可通过重新平衡睾丸的能量调查、下调Sertoli细胞的自噬反应和重新平衡Leydig细胞的自噬反应,改善TRA诱导的代谢氧化自噬。
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引用次数: 0
Therapeutic Potential of siRNAs in Tongue Squamous Cell Carcinoma by Modulating The PI3K/AKT and ERK Signaling Pathways: A Systematic Review. siRNA 通过调节 PI3K/AKT 和 ERK 信号通路对舌鳞癌的治疗潜力:系统综述。
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-08-11 DOI: 10.22074/cellj.2024.2021962.1501
Pouria Soltaninezhad, Nooshin Mohtasham, Fatemeh Arab, Masoumeh Sadeghi, Niloofar EbrahimZadeh, Seyedeh Fatemeh Azghadi, Farnaz Mohajertehran

Among the various manifestations of oral cavity cancer, tongue squamous cell carcinoma (TSCC), is the most common form of this condition. TSCC represents a major challenge in the field of cancer treatment. The emergence of small interfering RNAs (siRNAs) has opened new avenues for therapeutic intervention in TSCC. This research provides an overview of siRNA-mediated mechanisms and emphasizes their complex involvement in modulating key signaling pathways associated with TSCC progression. Relevant articles from 2004 to 2023 were conducted by using different keywords, such as "Interfering RNA " and "Small Interfering ". The search was following the Preferred Reporting Items for Systematic Reviews and Meta-analyses (PRISMA) guidelines based on inclusion and exclusion criteria. The quality of the studies was assessed using the Grading of Recommendations Assessment, Development, and Evaluation (GRADE) criteria. The selected studies (n=17) were subjected to perform comprehensive analysis. We concluded that the PI3K/AKT and ERK pathways, one of oncogenic signaling cascades in TSCC is notable. siRNAs and their role in targeting specific signaling pathways help us understand the molecular mechanisms underlying TSCC that may lead to the development promising therapies for TSCC. These therapies have the advantage of personalization and precision, targeted delivery, and the potential to overcome drug resistance. Therefore, the study enhances our comprehension of siRNA-based interventions' clinical potential in TSCC.

在口腔癌的各种表现形式中,舌鳞状细胞癌(TSCC)是最常见的一种。舌鳞状细胞癌是癌症治疗领域的一大挑战。小干扰 RNA(siRNA)的出现为治疗 TSCC 开辟了新途径。本研究概述了 siRNA 介导的机制,并强调了 siRNA 在调节与 TSCC 进展相关的关键信号通路中的复杂参与。通过使用不同的关键词,如 "干扰 RNA "和 "小干扰",对 2004 年至 2023 年的相关文章进行了检索。根据纳入和排除标准,按照系统综述和荟萃分析首选报告项目(PRISMA)指南进行了检索。研究质量采用建议评估、发展和评价分级(GRADE)标准进行评估。对所选研究(n=17)进行了综合分析。siRNA 及其在靶向特定信号通路中的作用有助于我们了解 TSCC 的分子机制,从而开发出有前景的 TSCC 治疗方法。这些疗法具有个性化、精准、靶向给药和克服耐药性的潜力等优势。因此,这项研究增强了我们对基于 siRNA 的 TSCC 临床干预潜力的理解。
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引用次数: 0
Testicular Cells Derived Conditioned Medium Supports Germ Cell Differentiation of Human Embryonic Stem Cells. 睾丸细胞衍生条件培养基支持人类胚胎干细胞的生殖细胞分化
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-08-11 DOI: 10.22074/cellj.2024.2012768.1419
Fatemeh Akyash, Reza Aflatoonian, Ehsan Farashahi-Yazd, Fatemeh Hajizadeh-Tafti, Jalal Golzadeh, Somayyeh Sadat Tahajjodi, Behrouz Aflatoonian

Objective: There are ethical and technical challenges in studying human germ cell development. Therefore, the aim of the study is in vitro differentiation of human embryonic stem cells (hESCs), as pluripotent cells, to the germ cells which is a valuable tool for studying molecular and cellular aspects of gametogenesis and understanding causes of infertility.

Materials and methods: In this experimental study, two different complete media [Dulbecco's Modified Eagle Medium (DMEM)+20% fetal bovine serum (FBS) and embryoid bodies (EBs) medium; KOSR/HES without basic fibroblast growth factor (bFGF)] were used in the both of test groups using testicular cells derived conditioned medium (TCCM) and control groups spontaneously differentiated (SD). Thereby, EBs from hESCs (Yazd2; 46XY) were cultured in different conditions EB medium; EB medium and conditioned EB medium; EB medium, DMEM, and FBS without conditioning; EB medium, conditioned DMEM, and FBS medium. EBs were collected after 4, 7, and 14 days and their gene expression profiles were assessed and compared to hESCs, as day 0, using IF and relative reverse transcription quantitative polymerase chain reaction (RT-qPCR).

Results: An increase in the gametogenesis gene expression level in TCCM groups was showed in comparison with SD groups. Additionally, immunostaining of differentiated cells in all groups showed in vitro gametogenesis (IVG).

Conclusion: Our findings showed that human TCCM could be used as a natural niche for in vitro male and female germ cell development. However, further studies are needed to define the factors and metabolites within the human TCCM.

目的:人类生殖细胞发育研究面临伦理和技术挑战。因此,本研究旨在体外分化作为多能细胞的人类胚胎干细胞(hESCs)为生殖细胞,这是研究配子发生的分子和细胞方面以及了解不育原因的宝贵工具:在这项实验研究中,两种不同的完全培养基[杜氏改良老鹰培养基(Dulbecco's Modified Eagle Medium,DMEM)+20%胎牛血清(FBS)和胚状体(EBs)培养基;不含碱性成纤维细胞生长因子(bFGF)的KOSR/HES]分别用于使用睾丸细胞条件培养基(TCCM)的试验组和自发分化(SD)的对照组。因此,将来自 hESCs(Yazd2;46XY)的 EB 在不同条件下培养:EB 培养基;EB 培养基和条件 EB 培养基;未经条件培养的 EB 培养基、DMEM 和 FBS;EB 培养基、条件 DMEM 和 FBS 培养基。4天、7天和14天后收集EB,使用IF和相对反转录定量聚合酶链反应(RT-qPCR)评估其基因表达谱,并与第0天的hESCs进行比较:结果:与 SD 组相比,TCCM 组的配子发生基因表达水平有所提高。此外,各组分化细胞的免疫染色均显示体外配子生成(IVG):我们的研究结果表明,人类 TCCM 可作为男性和女性生殖细胞体外发育的天然龛位。结论:我们的研究结果表明,人类 TCCM 可作为男性和女性生殖细胞体外发育的天然龛位,但还需要进一步研究,以确定人类 TCCM 中的各种因素和代谢物。
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引用次数: 0
Effects of Carvacrol on Cognitive Function and Apoptotic Gene Expression in Trimethyltin- Induced Hippocampal Injury in Rats. 香芹酚对三甲基锡诱导的大鼠海马损伤中认知功能和凋亡基因表达的影响
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-07-13 DOI: 10.22074/cellj.2024.2019885.1481
Farzaneh Babak, Mehdi Sadegh, Farideh Jalali-Mashayekhi, Mohammad Hassan Sakhaie

Objective: Trimethyltin (TMT) chloride is an organotin compound used in industry. It has been linked to generating reactive oxygen species (ROS), inflammatory processes, and neuronal death. Carvacrol is a monoterpene phenol found in the Lamiaceae plant family, modulating inflammatory conditions and necroptosis in neural tissue. This study aimed to investigate the neuroprotective effects of carvacrol in a rat model of hippocampal neuronal injury induced by TMT.

Materials and methods: In this experimental study, sixty male Wistar rats were randomly divided into five groups (n=12): group 1 receiving saline, group 2 received dimethyl sulfoxide (DMSO) as a vehicle for 21 days, group 3 receiving a single dose of TMT (8 mg/kg) and groups 4 and 5 receiving carvacrol 40 and 70 mg/kg daily for 21 days after a single dose of TMT. All injections were intraperitoneal (I.P.). Caspase-3, Bax, Bcl-2, and Bdnf gene expression and the number of pyknotic neurons in the hippocampus were quantified. Spatial memory was assessed with a radial arm maze.

Results: Statistical analysis of histological data revealed the carvacrol significantly attenuated cognitive dysfunction and the number of pyknotic neurons in the hippocampal CA1 region of rats treated with TMT. Based on real-time polymerase chain reaction (PCR), carvacrol modulated the expression of genes involved in apoptosis (Bax and Caspase-3) and upregulated anti-apoptotic (Bcl-2) and brain derived neurotrophic factor (Bdnf) genes in the hippocampal tissue.

Conclusion: These findings revealed neuroprotective effects of carvacrol which might be mediated by apoptotic and anti-apopetotic factors.

目的:三甲基氯化锡(TMT)是一种用于工业的有机锡化合物。它与产生活性氧(ROS)、炎症过程和神经元死亡有关。香芹酚是一种单萜酚,存在于腊梅科植物中,可调节神经组织的炎症状况和坏死。本研究旨在探讨香芹酚在 TMT 诱导的海马神经元损伤大鼠模型中的神经保护作用:在这项实验研究中,60 只雄性 Wistar 大鼠被随机分为 5 组(n=12):第 1 组接受生理盐水;第 2 组接受二甲基亚砜(DMSO)作为载体,持续 21 天;第 3 组接受单剂量 TMT(8 毫克/千克);第 4 组和第 5 组在单剂量 TMT 后每天接受香芹酚 40 和 70 毫克/千克,持续 21 天。所有注射均为腹腔注射。对Caspase-3、Bax、Bcl-2和Bdnf基因的表达以及海马中凋亡神经元的数量进行量化。用径向臂迷宫评估空间记忆:结果:对组织学数据进行统计分析后发现,香芹酚能显著减轻TMT治疗大鼠的认知功能障碍,并减少海马CA1区凋亡神经元的数量。根据实时聚合酶链反应(PCR),香芹酚调节了海马组织中参与凋亡的基因(Bax和Caspase-3)的表达,并上调了抗凋亡基因(Bcl-2)和脑源性神经营养因子(Bdnf)的基因:这些发现揭示了香芹酚的神经保护作用可能是由凋亡和抗凋亡因子介导的。
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引用次数: 0
Correction: Left Ventricular Geometry and Angiogenesis Improvement in Rat Chronic Ischemic Cardiomyopathy following Injection of Encapsulated Mesenchymal Stem Cells. 更正:注射包裹间充质干细胞后大鼠慢性缺血性心肌病的左心室几何形状和血管生成得到改善
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-07-13 DOI: 10.22074/cellj.2024.713824
Negar Karimi Hajishoreh, Nafiseh Baheiraei, Nasim Naderi, Mojdeh Salehnia, Mehdi Razavi

In this article published in Cell J, Vol 24, No 12, 2022, on pages 741-747, the authors found that there was some mistakes in the Table 1 and we have corrected them in the following table. The authors would like to apologize for any inconvenience.

在这篇发表于《细胞杂志》(Cell J)2022 年第 24 卷第 12 期第 741-747 页的文章中,作者发现表 1 中存在一些错误,我们已在下表中进行了更正。给您带来的不便,作者深表歉意。
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引用次数: 0
Correction: Relationship between Salivary Alkaline Phosphatase Enzyme Activity and The Concentrations of Salivary Calcium and Phosphate Ions. 更正:唾液碱性磷酸酶酶活性与唾液钙离子和磷离子浓度之间的关系
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-07-13 DOI: 10.22074/cellj.2024.713825
Mina Jazaeri, Hosein Malekzadeh, Hamidreza Abdolsamadi, Loghman Rezaei-Soufi, Mohammad Samami

In this article published in Cell J, Vol 17, No 1, 2015, on pages 159-162, the authors found that the affiliation of second author in address 2 was missed during the formatting of the paper. Therefore, we corrected it. The authors would like to apologize for any inconvenience.

在这篇发表于《细胞杂志》(Cell J)2015年第17卷第1期第159-162页的文章中,作者发现地址2中第二作者的单位在论文格式排版时被遗漏。因此,我们进行了更正。给您带来的不便,作者深表歉意。
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引用次数: 0
The Interactive Effects of The Aerobic Exercise and Vitamin E Supplementation on Parkinson's Rat Model. 有氧运动和补充维生素 E 对帕金森病大鼠模型的交互作用
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-07-13 DOI: 10.22074/cellj.2024.2023457.1515
Yadollah Zibaei Yekta, Rohollah Ranjbar, Abdolhamid Habibi, Aliakbar Alizadeh

Objective: In Parkinson's disease (PD), mitochondrial defects and oxidative stress cause an increase in free radicals and the death of dopaminergic neurons in the substantia nigra. By preventing lipid peroxidation and protecting against peroxide radicals, vitamin E is the most important antioxidant of biological membranes that can neutralize free radicals. Also, the improvement of the functional status of mitochondria can be influenced by exercise, which can be partially the result of changes in the mitochondrial mitophagy and dynamics system. This study aimed to investigate the interactive effects of six weeks of vitamin E (VE) consumption and training on the mitochondrial function [Cytochrome C (Cyt-C), Adenosine triphosphate (Atp) synthase, optical atrophy1 mitochondrial dynamics like guanosine triphosphatase (GTPase), 8-Oxodequanosin and Pten induced kinase 1 (Pink1) is a protein coding gene] in the hippocampus tissue of PD rats.

Materials and methods: In this experimental study, 4-6-month-old Sprague-Dawley rats (mean weight 250 ± 30 g) were given parkinsonism with reserpine (2 mg/kg) and were categorized into different groups, including healthy (H), PD, VE solvent+PD (Sham), aerobic exercise+PD (AE+PD), VE+PD, AE+VE+PD. The aerobic training program was carried out for six weeks and 5 sessions per week and each session lasted 15-22 minutes. VE was also taken orally at 30 mg/kg daily.

Results: A six-week regimen of VE supplement along with the AE significantly reduced the Cyt-C gene expression level, also we observed a significant increase in gene expression level of the Pink1, Atp synthase and Opa1 (P<0.05). There is no significant difference was found in the level of 8-Oxog detected in hippocampal tissue samples (P>0.05).

Conclusion: The consumption of VE along with AE may provide therapeutic effects on mitochondrial damage in PD rats.

研究目的在帕金森病(PD)中,线粒体缺陷和氧化应激会导致自由基增加和黑质中多巴胺能神经元的死亡。维生素 E 能防止脂质过氧化,抵御过氧化自由基,是生物膜最重要的抗氧化剂,能中和自由基。此外,线粒体功能状态的改善也会受到运动的影响,这可能是线粒体有丝分裂和动力系统变化的部分结果。本研究旨在探讨六周维生素 E(VE)摄入量和训练对 PD 大鼠海马组织线粒体功能[细胞色素 C(Cyt-C)、三磷酸腺苷(Atp)合成酶、光萎缩1 线粒体动力学如鸟苷三磷酸酶(GTPase)、8-氧代鸟苷和 Pten 诱导激酶 1(Pink1)是一种蛋白编码基因]的交互影响:本实验将4-6月龄的Sprague-Dawley大鼠(平均体重250 ± 30 g)用瑞舍平(2 mg/kg)治疗帕金森病,并将其分为不同的组别,包括健康组(H)、帕金森病组(PD)、VE溶剂+PD组(Sham)、有氧运动+PD组(AE+PD)、VE+PD组、AE+VE+PD组。有氧训练计划为期 6 周,每周 5 次,每次 15-22 分钟。同时,每天口服 30 毫克/千克的 VE:结果:在服用 AE 的同时补充 VE,为期六周的训练可显著降低 Cyt-C 基因的表达水平,我们还观察到 Pink1、Atp 合酶和 Opa1 的基因表达水平显著增加(P0.05):结论:服用 VE 和 AE 可对帕金森病大鼠的线粒体损伤起到治疗作用。
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引用次数: 0
Transcriptomic Analysis Reveals Sex-Based Differences in The Prefrontal Cortex of Autism Spectrum Disorder Patients. 转录组分析揭示自闭症谱系障碍患者前额叶皮层的性别差异
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-07-13 DOI: 10.22074/cellj.2024.2018050.1471
Asma Sobhani, Kolsoum InanlooRahatloo

Objective: The prevalence of neurological disorders often varies by sex, with conditions such as Alzheimer's disease and autism spectrum disorder (ASD) demonstrating notable differences in incidence. The aim of this study is to understand the molecular basis for these divergences in order to facilitate the creation of sex-specific therapeutic strategies.

Materials and methods: This study is a bioinformatic analysis of publicly available RNA sequencing datasets involving autism patients. The study utilized RNA sequencing data from postmortem human brains' prefrontal cortex, including 38 neurotypical controls and 34 individuals with ASD. The sequencing data was obtained from previously published papers, and we downloaded the raw data from SRA. We investigated the molecular basis of sex-biased presentation in ASD through comprehensive transcriptomic analysis.

Results: Comparative analysis of gene expression between male and female subjects, both autistic and unaffected, was conducted, using a significance level of ≤0.01. In autistic individuals, 136 genes demonstrated differential expression between sexes, predominantly upregulated in males, indicating a bias in male gene expression. Among these, 12 genes were identified as risk factors in the SFARI dataset. While most sex-biased genes were autosomal, expression differences on sex chromosomes were also observed in neurotypical subjects. Notable genes included TCF7L2, collagen family genes, and solute carrier family genes. In ASD males, extracellular matrix (ECM) organization emerged as a significant pathway, while immune-related processes were prominent in unaffected individuals.

Conclusion: Our study highlights the impact of the ECM pathway in ASD, with notable differences between sexes, particularly in males. MIR424 shows promise as a potential biomarker for ASD in males. Recognizing the importance of sex differences in ASD transcriptomic research is crucial, as these variances provide insights into the disorder's pathophysiology and may guide the development of more personalized treatments for both sexes.

目的:神经系统疾病的发病率往往因性别而异,阿尔茨海默病和自闭症谱系障碍(ASD)等疾病的发病率也存在明显差异。本研究的目的是了解这些差异的分子基础,以便于制定针对不同性别的治疗策略:本研究对涉及自闭症患者的公开 RNA 测序数据集进行了生物信息学分析。该研究利用了死后人类大脑前额叶皮层的 RNA 测序数据,其中包括 38 名神经典型对照组和 34 名 ASD 患者。测序数据来自以前发表的论文,我们从 SRA 下载了原始数据。我们通过全面的转录组分析研究了 ASD 性别差异表现的分子基础:结果:我们对男性和女性受试者(包括自闭症患者和未受影响者)的基因表达进行了比较分析,显著性水平≤0.01。在自闭症患者中,有 136 个基因的表达在性别间存在差异,主要是在男性中上调,这表明男性基因表达存在偏差。其中,12 个基因在 SFARI 数据集中被确定为风险因素。虽然大多数性别偏倚基因是常染色体基因,但在神经畸形受试者中也观察到了性染色体上的表达差异。值得注意的基因包括TCF7L2、胶原家族基因和溶质载体家族基因。在ASD男性中,细胞外基质(ECM)组织是一个重要途径,而在未受影响的个体中,免疫相关过程则很突出:我们的研究强调了 ECM 通路在 ASD 中的影响,不同性别之间存在明显差异,尤其是男性。MIR424有望成为男性 ASD 的潜在生物标记物。认识到性别差异在 ASD 转录组研究中的重要性至关重要,因为这些差异有助于深入了解该疾病的病理生理学,并可指导开发针对男女患者的更加个性化的治疗方法。
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引用次数: 0
Prognostic Significance of Circulating and Disseminated Tumor Cells in Breast Cancer Patients before and after Adjuvant Chemotherapy. 辅助化疗前后乳腺癌患者体内循环和播散肿瘤细胞的预后意义
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-07-13 DOI: 10.22074/cellj.2024.2017486.1466
Parisa Ghaffari, Meysam Yousefi, Mozaffar Aznab, Negar Khazan, Marjan Yaghmaie, Davood Bashash, Mohammad Vaezi, Ardashir Ghavamzadeh, Seyed H Ghaffari

Objective: Despite the advances in treatment, breast cancer (BC) remains a major cause of death in women. This study aims to evaluate the prognostic significance of detecting circulating tumor cells (CTCs) and disseminated tumor cells (DTCs) in paired peripheral blood (PB) and bone marrow (BM) samples obtained both before and after adjuvant chemotherapy from patients with operable BC.

Materials and methods: In this experimental study, from 160 patients with primary BC, we collected 160 PB and BM samples before and we could be able to collect PB and BM samples from 100 of them after adjuvant chemotherapy. The expression level of cytokeratin 19 (CK19), carcinoembryonic antigen (CEA), mammaglobin 1 (MGB1), mucin 2 (MUC2) and trefoil factor 1 (TFF1) mRNAs in the PB/BM samples were analyzed by quantitative real-time polymerase chain reaction (PCR).

Results: Multivariate Cox regression analyses indicated that the detection of CK19 mRNA-positive CTCs/DTCs either before or after adjuvant chemotherapy was an independent factor for prognosis associated with decreased diseasefree survival (DFS). Patients with tumor cells detected in both PB and BM and patients with persistent detection of tumor cells before and after chemotherapy had worse outcomes compared to those with tumor cells detected in one or neither of the compartments.

Conclusion: This study suggests that the detection of CK19 mRNA-positive CTCs/DTCs either before or after adjuvant chemotherapy could be an independent predictor of DFS in operable BC patients.

目的:尽管治疗手段不断进步,但乳腺癌(BC)仍然是导致女性死亡的主要原因。本研究旨在评估在可手术 BC 患者辅助化疗前后采集的配对外周血(PB)和骨髓(BM)样本中检测循环肿瘤细胞(CTC)和播散肿瘤细胞(DTC)的预后意义:在这项实验研究中,我们从160名原发性BC患者中收集了160份辅助化疗前的外周血和骨髓样本,并收集了其中100份辅助化疗后的外周血和骨髓样本。通过实时聚合酶链反应(PCR)定量分析了细胞角蛋白19(CK19)、癌胚抗原(CEA)、乳腺球蛋白1(MGB1)、粘蛋白2(MUC2)和三叶因子1(TFF1)mRNA在PB/BM样本中的表达水平:多变量Cox回归分析表明,辅助化疗前后检测到CK19 mRNA阳性的CTCs/DTCs是与无病生存期(DFS)下降相关的独立预后因素。与只在一个部位或两个部位均未检测到肿瘤细胞的患者相比,同时在肺结核和骨髓中检测到肿瘤细胞的患者以及在化疗前后持续检测到肿瘤细胞的患者的预后更差:这项研究表明,在辅助化疗前后检测到 CK19 mRNA 阳性的 CTCs/DTCs 可以独立预测可手术 BC 患者的 DFS。
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引用次数: 0
Investigation of SPOCD1 as A Suitable Diagnostic and Prognostic Biomarker in Various Common Cancer Types: Bioinformatics and Practical Analysis. 将 SPOCD1 作为各种常见癌症类型的诊断和预后生物标记物的研究:生物信息学与实践分析
IF 1.7 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-07-13 DOI: 10.22074/cellj.2024.2022401.1506
Samira Yavari, Maryam Naseroleslami, Maryam Peymani, Farshid Yekani, Niloufar Khayam Nekouei

Objective: The objective of this study was to assess whether Spen paralogue and orthologue C-terminal domain containing 1 (SPOCD1) gene expression could serve as a valuable prognostic and diagnostic biomarker in common cancers, drawing from insights in recent literature. We sought to verify this concept by utilizing data sourced from The Cancer Genome Atlas (TCGA) alongside clinical samples.

Materials and methods: In this bioinformatics and experimental study, SPOCD1 RNA-seq data from 12 common cancers were collected from TCGA Pan-Cancer Atlas using the R package "TCGA BIOLINKS" and normalized for analysis. Various analytical tools, including receiver operating characteristic (ROC) curves, Kaplan-Meier and Coxregression analyses, and pathway enrichment analysis via the molecular signatures database (MSigDB), were applied. Drug resistance/sensitivity correlations with SPOCD1 expression were explored using the Gene Expression Omnibus (GEO) database. Clinical colorectal cancer (CRC) samples, including both colon and rectal malignant samples, were also evaluated.

Results: The results showed elevated SPOCD1 expression in most cancers (9/12), with notable prognostic value in COAD, HNSC, KICH, and LIHC, and a correlation with poor prognosis in COAD for disease-free survival. ROC curve analysis suggested SPOCD1 as a diagnostic biomarker in the majority of cases (7/12), although this pattern was inconsistent in clinical CRC samples. Pathway enrichment analysis revealed a strong correlation between SPOCD1 expression and critical molecular pathways. Unlike former results, we found that SPOCD1 upregulated when interacting with PD-0325901. However, treating with Panobinostat led to downregulation. Both are as anticancer reagents.

Conclusion: This study confirms the potential of SPOCD1 as a diagnostic and prognostic biomarker in prevalent cancers. However, extensive clinical data, particularly for CRC, are required to validate its reliability. Different COAD subtypes may exhibit varying correlations with SPOCD1 expression levels, underscoring the need for further investigation to fully understand its diagnostic and prognostic value.

研究目的本研究的目的是借鉴近期文献中的观点,评估Spen旁系和直向同源物C-末端结构域包含1(SPOCD1)基因的表达是否可作为常见癌症的一种有价值的预后和诊断生物标志物。我们试图利用来自癌症基因组图谱(TCGA)和临床样本的数据来验证这一观点:在这项生物信息学和实验研究中,我们使用R软件包 "TCGA BIOLINKS "从TCGA泛癌图谱中收集了12种常见癌症的SPOCD1 RNA-seq数据,并进行了归一化分析。应用了多种分析工具,包括接收者操作特征曲线(ROC)、Kaplan-Meier和Coxregression分析,以及通过分子特征数据库(MSigDB)进行的通路富集分析。利用基因表达总库(GEO)数据库探讨了耐药性/敏感性与 SPOCD1 表达的相关性。此外,还对包括结肠和直肠恶性样本在内的临床结直肠癌(CRC)样本进行了评估:结果表明,SPOCD1在大多数癌症(9/12)中表达升高,在COAD、HNSC、KICH和LIHC中具有显著的预后价值,在COAD中与无病生存的不良预后相关。ROC 曲线分析表明,SPOCD1 在大多数病例(7/12 例)中可作为诊断生物标志物,但在临床 CRC 样本中这种模式并不一致。通路富集分析表明,SPOCD1的表达与关键分子通路密切相关。与之前的结果不同,我们发现 SPOCD1 在与 PD-0325901 相互作用时上调。然而,与 Panobinostat 共同作用则会导致下调。两者都是抗癌试剂:这项研究证实了SPOCD1在流行性癌症中作为诊断和预后生物标志物的潜力。然而,要验证其可靠性,还需要大量的临床数据,尤其是针对 CRC 的数据。不同的COAD亚型可能与SPOCD1的表达水平表现出不同的相关性,因此需要进一步研究以充分了解其诊断和预后价值。
{"title":"Investigation of <i>SPOCD1</i> as A Suitable Diagnostic and Prognostic Biomarker in Various Common Cancer Types: Bioinformatics and Practical Analysis.","authors":"Samira Yavari, Maryam Naseroleslami, Maryam Peymani, Farshid Yekani, Niloufar Khayam Nekouei","doi":"10.22074/cellj.2024.2022401.1506","DOIUrl":"10.22074/cellj.2024.2022401.1506","url":null,"abstract":"<p><strong>Objective: </strong>The objective of this study was to assess whether Spen paralogue and orthologue C-terminal domain containing 1 (<i>SPOCD1</i>) gene expression could serve as a valuable prognostic and diagnostic biomarker in common cancers, drawing from insights in recent literature. We sought to verify this concept by utilizing data sourced from The Cancer Genome Atlas (TCGA) alongside clinical samples.</p><p><strong>Materials and methods: </strong>In this bioinformatics and experimental study, <i>SPOCD1</i> RNA-seq data from 12 common cancers were collected from TCGA Pan-Cancer Atlas using the R package \"TCGA BIOLINKS\" and normalized for analysis. Various analytical tools, including receiver operating characteristic (ROC) curves, Kaplan-Meier and Coxregression analyses, and pathway enrichment analysis via the molecular signatures database (MSigDB), were applied. Drug resistance/sensitivity correlations with <i>SPOCD1</i> expression were explored using the Gene Expression Omnibus (GEO) database. Clinical colorectal cancer (CRC) samples, including both colon and rectal malignant samples, were also evaluated.</p><p><strong>Results: </strong>The results showed elevated <i>SPOCD1</i> expression in most cancers (9/12), with notable prognostic value in COAD, HNSC, KICH, and LIHC, and a correlation with poor prognosis in COAD for disease-free survival. ROC curve analysis suggested SPOCD1 as a diagnostic biomarker in the majority of cases (7/12), although this pattern was inconsistent in clinical CRC samples. Pathway enrichment analysis revealed a strong correlation between <i>SPOCD1</i> expression and critical molecular pathways. Unlike former results, we found that SPOCD1 upregulated when interacting with PD-0325901. However, treating with Panobinostat led to downregulation. Both are as anticancer reagents.</p><p><strong>Conclusion: </strong>This study confirms the potential of <i>SPOCD1</i> as a diagnostic and prognostic biomarker in prevalent cancers. However, extensive clinical data, particularly for CRC, are required to validate its reliability. Different COAD subtypes may exhibit varying correlations with <i>SPOCD1</i> expression levels, underscoring the need for further investigation to fully understand its diagnostic and prognostic value.</p>","PeriodicalId":49224,"journal":{"name":"Cell Journal","volume":"26 5","pages":"309-319"},"PeriodicalIF":1.7,"publicationDate":"2024-07-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141767773","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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