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The folding and misfolding of multidomain proteins. 多结构域蛋白的折叠和错误折叠。
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-01 Epub Date: 2025-01-09 DOI: 10.1016/j.mam.2025.101337
Stefano Gianni, Maurizio Brunori

Protein folding represents a vital process for any living organism. While significant insights have been gained from studying single-domain proteins, our current knowledge on the folding mechanisms of multidomain proteins remains relatively limited, primarily due to their inherent complexity. The principal aim of this review lies in summarizing the emerging view pertaining multi-domain folding, emphasizing their modular nature, which minimizes misfolding and facilitates evolutionary innovation. We discuss the energetic interplay between domains, highlighting particularly the cases where domain interactions lead to transient misfolded intermediates. These interactions can result in diverse effects, including cooperative folding and domain-specific perturbations, which are particularly relevant to the pathogenesis of neurodegenerative diseases like polyglutamine disorders. The review underscores the critical need to understand multidomain folding, to better comprehend and potentially mitigate the molecular underpinnings of protein misfolding diseases.

蛋白质折叠对任何生物体来说都是一个重要的过程。虽然从研究单域蛋白中获得了重要的见解,但我们目前对多域蛋白折叠机制的了解仍然相对有限,主要是由于它们固有的复杂性。本综述的主要目的在于总结有关多畴折叠的新兴观点,强调它们的模块化性质,从而最大限度地减少错误折叠并促进进化创新。我们讨论了区域之间的能量相互作用,特别强调了区域相互作用导致瞬态错误折叠中间体的情况。这些相互作用可导致多种影响,包括合作折叠和区域特异性扰动,这与神经退行性疾病(如多谷氨酰胺疾病)的发病机制特别相关。这篇综述强调了了解多结构域折叠的迫切需要,以便更好地理解和潜在地减轻蛋白质错误折叠疾病的分子基础。
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引用次数: 0
Cancer vaccines: Target antigens, vaccine platforms and preclinical models. 癌症疫苗:靶抗原、疫苗平台和临床前模型。
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-01 Epub Date: 2024-12-03 DOI: 10.1016/j.mam.2024.101324
Francesca Ruzzi, Federica Riccardo, Laura Conti, Lidia Tarone, Maria Sofia Semprini, Elisabetta Bolli, Giuseppina Barutello, Elena Quaglino, Pier-Luigi Lollini, Federica Cavallo

This review provides a comprehensive overview of the evolving landscape of cancer vaccines, highlighting their potential to revolutionize tumor prevention. Building on the success of vaccines against virus-related cancers, such as HPV- and HBV-associated cervical and liver cancers, the current challenge is to extend these achievements to the prevention of non-viral tumors and the treatment of preneoplastic or early neoplastic lesions. This review analyzes the critical aspects of preventive anti-cancer vaccination, focusing on the choice of target antigens, the development of effective vaccine platforms and technologies, and the use of various model systems for preclinical testing, from laboratory rodents to companion animals.

这篇综述全面概述了癌症疫苗的发展前景,强调了它们在肿瘤预防方面的革命性潜力。在针对病毒相关癌症(如与人乳头瘤病毒和乙肝病毒相关的宫颈癌和肝癌)的疫苗取得成功的基础上,目前的挑战是将这些成就扩展到预防非病毒性肿瘤和治疗肿瘤前或早期肿瘤病变。本文分析了预防性抗癌疫苗接种的关键方面,重点是目标抗原的选择,有效疫苗平台和技术的发展,以及从实验室啮齿动物到伴侣动物的各种临床前试验模型系统的使用。
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引用次数: 0
An updated systematic review about various effects of microplastics on cancer: A pharmacological and in-silico based analysis. 关于微塑料对癌症的各种影响的最新系统综述:药理学和基于计算机的分析。
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-01 Epub Date: 2025-01-04 DOI: 10.1016/j.mam.2024.101336
Akmaral Baspakova, Afshin Zare, Roza Suleimenova, Aidar B Berdygaliev, Bibigul Karimsakova, Kymbat Tussupkaliyeva, Nadiar M Mussin, Kulyash R Zhilisbayeva, Nader Tanideh, Amin Tamadon

Microplastics (MPs) are known as substantial environmental and health threats because of their pervasive existence and potential function in human diseases. This study is the first research in which a comprehensive analysis of various impacts of MPs on cancer cells is performed through pharmacological and in silico approaches. Moreover, our results demonstrate that MPs have both promotive and suppressive impacts on cancer cells, changing some of the important features of these kinds of cells including cellular viability, migration, metastasis, and apoptosis. Furthermore, the present study displayed that AP-2 complex subunit mu-1 (AP2M1), Asialoglycoprotein receptor 2 (ASGR2), Bax inhibitor-1 (BI-1), and Ferritin Heavy Chain, and pivotal role in the progression of cancers mediated by MPs. Moreover, our in-silico analysis identified Goserelin, Paclitaxel, Raloxifene, Exemestane, Epirubicin, Trametinib, Vemurafenib, Pactitaxel, and Sorafenib as potential anticancer agents for curing MPS-based cancer. Besides, our results demonstrated that MPs can exacerbate the development of tumor cells by affecting some important mechanisms including oxidative stress, immune suppression, and adjusting of critical signaling pathways. Interestingly, some sorts of MPs also displayed suppressive effects on cancer cells in some particular contexts, highlighting their complicated biological roles in different biological interactions. Ultimately the present survey tries to demonstrate the crucial roles of MPs in cancer cells and the different mechanisms that occur in the mentioned cells in order to emphasize performing more studies about clarifying the roles of MPs in carcinogenesis.

由于微塑料的普遍存在和在人类疾病中的潜在作用,它们被认为是重大的环境和健康威胁。这项研究是第一个通过药理学和计算机方法对MPs对癌细胞的各种影响进行综合分析的研究。此外,我们的研究结果表明,MPs对癌细胞既有促进作用,也有抑制作用,改变了这些细胞的一些重要特征,包括细胞活力、迁移、转移和凋亡。此外,本研究还发现AP-2复合物亚基mu-1 (AP2M1)、亚洲糖蛋白受体2 (ASGR2)、Bax抑制剂-1 (BI-1)和铁蛋白重链在MPs介导的癌症进展中起关键作用。此外,我们的计算机分析发现戈舍雷林、紫杉醇、雷洛昔芬、依西美坦、表柔比星、曲美替尼、Vemurafenib、帕克他赛和索拉非尼是治疗mps型癌症的潜在抗癌药物。此外,我们的研究结果表明,MPs可以通过影响氧化应激、免疫抑制和关键信号通路的调节等重要机制来加剧肿瘤细胞的发展。有趣的是,某些种类的MPs在某些特定情况下也表现出对癌细胞的抑制作用,突出了它们在不同生物相互作用中的复杂生物学作用。最后,本研究试图证明MPs在癌细胞中的关键作用以及在上述细胞中发生的不同机制,以强调进行更多的研究来阐明MPs在癌变中的作用。
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引用次数: 0
Vaccines for cancer prevention and treatment. 预防和治疗癌症的疫苗。
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-01 Epub Date: 2024-12-13 DOI: 10.1016/j.mam.2024.101334
Federica Cavallo, Pier-Luigi Lollini
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引用次数: 0
The molecular code of kidney cancer: A path of discovery for gene mutation and precision therapy. 肾癌的分子密码:基因突变和精准治疗的发现之路。
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.mam.2024.101335
Deqian Xie, Guandu Li, Zunwen Zheng, Xiaoman Zhang, Shijin Wang, Bowen Jiang, Xiaorui Li, Xiaoxi Wang, Guangzhen Wu

Renal cell carcinoma (RCC) is a malignant tumor with highly heterogeneous and complex molecular mechanisms. Through systematic analysis of TCGA, COSMIC and other databases, 24 mutated genes closely related to RCC were screened, including VHL, PBRM1, BAP1 and SETD2, which play key roles in signaling pathway transduction, chromatin remodeling and DNA repair. The PI3K/AKT/mTOR signaling pathway is particularly important in the pathogenesis of RCC. Mutations in genes such as PIK3CA, MTOR and PTEN are closely associated with metabolic abnormalities and tumor cell proliferation. Clinically, mTOR inhibitors and VEGF-targeted drugs have shown significant efficacy in personalized therapy. Abnormal regulation of metabolic reprogramming, especially glycolysis and glutamine metabolic pathways, provides tumor cells with continuous energy supply and survival advantages, and GLS1 inhibitors have shown promising results in preclinical studies. This paper also explores the potential of immune checkpoint inhibitors in combination with other targeted drugs, as well as the promising application of nanotechnology in drug delivery and targeted therapy. In addition, unique molecular mechanisms are revealed and individualized therapeutic strategies are explored for specific subtypes such as TFE3, TFEB rearrangement type and SDHB mutant type. The review summarizes the common gene mutations in RCC and their molecular mechanisms, emphasizes their important roles in tumor diagnosis, treatment and prognosis, and looks forward to the application prospects of multi-pathway targeted therapy, metabolic targeted therapy, immunotherapy and nanotechnology in RCC treatment, providing theoretical support and clinical guidance for individualized treatment and new drug development.

肾细胞癌(RCC)是一种具有高度异质性和复杂分子机制的恶性肿瘤。通过对TCGA、COSMIC等数据库的系统分析,筛选出24个与RCC密切相关的突变基因,包括VHL、PBRM1、BAP1和SETD2,这些基因在信号通路转导、染色质重塑和DNA修复中发挥关键作用。PI3K/AKT/mTOR信号通路在RCC的发病机制中尤为重要。PIK3CA、MTOR和PTEN等基因突变与代谢异常和肿瘤细胞增殖密切相关。临床上,mTOR抑制剂和vegf靶向药物在个体化治疗中已显示出显著的疗效。异常调节代谢重编程,特别是糖酵解和谷氨酰胺代谢途径,为肿瘤细胞提供了持续的能量供应和生存优势,GLS1抑制剂在临床前研究中显示出良好的效果。本文还探讨了免疫检查点抑制剂与其他靶向药物联合的潜力,以及纳米技术在药物传递和靶向治疗中的应用前景。此外,还揭示了TFE3、TFEB重排型和SDHB突变型等特定亚型的独特分子机制,并探索了个体化治疗策略。综述了RCC常见基因突变及其分子机制,强调其在肿瘤诊断、治疗和预后中的重要作用,展望了多途径靶向治疗、代谢靶向治疗、免疫治疗和纳米技术在RCC治疗中的应用前景,为个体化治疗和新药开发提供理论支持和临床指导。
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引用次数: 0
Testicular immunity 睾丸免疫
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-25 DOI: 10.1016/j.mam.2024.101323
Shu-Yun Li , Sudeep Kumar , Xiaowei Gu , Tony DeFalco
The testis is a unique environment where immune responses are suppressed to allow the development of sperm that possess autoimmunogenic antigens. There are several contributors responsible for testicular immune privilege, including the blood-testis barrier, testicular immune cells, immunomodulation by Sertoli cells, and high levels of steroid hormones. Despite multiple mechanisms in place to regulate the testicular immune environment, pathogens that disrupt testicular immunity can lead to long-term effects such as infertility. If testicular immunity is disturbed, autoimmune reactions can also occur, leading to aberrant immune cell infiltration and subsequent attack of autoimmunogenic germ cells. Here we discuss cellular and molecular factors underlying testicular immunity and how testicular infection or autoimmunity compromise immune privilege. We also describe infections and autoimmune diseases that impact the testis. Further research into testicular immunity will reveal how male fertility is maintained and will help update therapeutic strategies for infertility and other testicular disorders.
睾丸是一个独特的环境,在这里免疫反应受到抑制,从而使具有自身免疫原抗原的精子得以发育。造成睾丸免疫特权的因素很多,包括血睾屏障、睾丸免疫细胞、Sertoli 细胞的免疫调节以及高水平的类固醇激素。尽管存在多种调节睾丸免疫环境的机制,但破坏睾丸免疫的病原体会导致不育等长期影响。如果睾丸免疫受到干扰,还可能发生自身免疫反应,导致免疫细胞异常浸润,进而攻击自身免疫性生殖细胞。在此,我们将讨论睾丸免疫的细胞和分子因素,以及睾丸感染或自身免疫如何损害免疫特权。我们还描述了影响睾丸的感染和自身免疫性疾病。对睾丸免疫的进一步研究将揭示男性生育能力是如何维持的,并有助于更新不育症和其他睾丸疾病的治疗策略。
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引用次数: 0
Diet and exercise in frailty and sarcopenia. Molecular aspects 虚弱和肌肉疏松症中的饮食与运动。分子方面
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-25 DOI: 10.1016/j.mam.2024.101322
Fernando Millan-Domingo , Esther Garcia-Dominguez , Juan Gambini , Gloria Olaso-Gonzalez , Jose Viña , Maria Carmen Gomez-Cabrera
Function declines throughout life although phenotypical manifestations in terms of frailty or disability are only seen in the later periods of our life. The causes underlying lifelong function decline are the aging process “per se”, chronic diseases, and lifestyle factors. These three etiological causes result in the deterioration of several organs and systems which act synergistically to finally produce frailty and disability. Regardless of the causes, the skeletal muscle is the main organ affected by developing sarcopenia.
In the first section of the manuscript, as an introduction, we review the quantitative and qualitative age-associated skeletal muscle changes leading to frailty and sarcopenia and their impact in the quality of life and independence in the elderly. The reversibility of frailty and sarcopenia are discussed in the second and third sections of the manuscript. The most effective intervention to delay and even reverse frailty is exercise training. We review the role of different training programs (resistance exercise, cardiorespiratory exercise, multicomponent exercise, and real-life interventions) not only as a preventive but also as a therapeutical strategy to promote healthy aging. We also devote a section in the text to the sexual dimorphic effects of exercise training interventions in aging. How to optimize the skeletal muscle anabolic response to exercise training with nutrition is also discussed in our manuscript. The concept of anabolic resistance and the evidence of the role of high-quality protein, essential amino acids, creatine, vitamin D, β-hydroxy-β-methylbutyrate, and Omega-3 fatty acids, is reviewed. In the last section of the manuscript, the main genetic interventions to promote robustness in preclinical models are discussed. We aim to highlight the molecular pathways that are involved in frailty and sarcopenia. The possibility to effectively target these signaling pathways in clinical practice to delay muscle aging is also discussed.
人的一生都会出现功能衰退,但衰弱或残疾的表型表现只出现在晚年。导致终生功能衰退的原因是 "本身 "的衰老过程、慢性疾病和生活方式因素。这三种病因会导致多个器官和系统的衰退,而这些器官和系统的衰退又会产生协同作用,最终导致虚弱和残疾。在手稿的第一部分,作为引言,我们回顾了导致虚弱和肌肉疏松症的与年龄相关的骨骼肌定量和定性变化及其对老年人生活质量和独立性的影响。手稿的第二和第三部分讨论了虚弱和肌肉疏松症的可逆性。运动训练是延缓甚至逆转衰弱的最有效干预措施。我们回顾了不同训练计划(阻力运动、心肺运动、多组分运动和现实生活干预)的作用,它们不仅是促进健康老龄化的预防策略,也是治疗策略。我们还在文中专门用了一个章节来讨论运动训练干预在衰老过程中的性别双态效应。我们的手稿还讨论了如何通过营养优化骨骼肌对运动训练的合成代谢反应。我们回顾了合成代谢阻力的概念以及优质蛋白质、必需氨基酸、肌酸、维生素 D、β-羟基-β-甲基丁酸和 Omega-3 脂肪酸作用的证据。手稿的最后一部分讨论了促进临床前模型稳健性的主要基因干预措施。我们的目的是强调与虚弱和肌肉疏松症有关的分子通路。我们还讨论了在临床实践中有效针对这些信号通路以延缓肌肉衰老的可能性。
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引用次数: 0
Physiological and pathological aspects of epididymal sperm maturation 附睾精子成熟的生理和病理问题
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-27 DOI: 10.1016/j.mam.2024.101321
Mariana Weigel Muñoz, Débora J. Cohen, Vanina G. Da Ros, Soledad N. González, Abril Rebagliati Cid, Valeria Sulzyk, Patricia S. Cuasnicu
In mammals, sperm that leave the testes are nonfunctional and require a complex post-testicular maturation process to acquire their ability to recognize and fertilize the egg. The crucial maturation changes that provide sperm their fertilizing capability occur while passing through the epididymis. Due to the widespread use of assisted reproductive technologies to address male infertility, there has been a significant decrease in research focusing on the mechanisms underlying the maturation process over the past decades. Considering that up to 40% of male infertility is idiopathic and could be reflecting sperm maturation defects, the study of post-testicular sperm maturation will clearly contribute to a better understanding of the causes of male infertility and to the development of both new approaches to maturing sperm in vitro and safer male contraceptive methods. Based on this, the present review focuses on the physiopathology of the epididymis as well as on current approaches under investigation to improve research in sperm maturation and as potential therapeutic options for male infertility.
在哺乳动物中,离开睾丸的精子是无功能的,需要经过复杂的睾丸后成熟过程才能获得识别和受精卵的能力。使精子具备受精能力的关键成熟变化是在通过附睾时发生的。由于辅助生殖技术在解决男性不育症方面的广泛应用,在过去的几十年中,对精子成熟过程机制的研究明显减少。考虑到多达 40% 的男性不育是特发性的,可能反映了精子成熟缺陷,对睾丸后精子成熟的研究显然有助于更好地理解男性不育的原因,并有助于开发体外精子成熟的新方法和更安全的男性避孕方法。在此基础上,本综述侧重于附睾的生理病理以及目前正在研究的方法,以改进精子成熟的研究,并作为男性不育症的潜在治疗方案。
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引用次数: 0
Advances in human In vitro spermatogenesis: A review 人类体外精子发生的进展:综述
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-23 DOI: 10.1016/j.mam.2024.101320
Anna-Lisa V. Nguyen , Sania Julian , Ninglu Weng , Ryan Flannigan
Recent advances surrounding in vitro spermatogenesis (IVS) have shown potential in creating a new paradigm of regenerative medicine in the future of fertility treatments for males experiencing non-obstructive azoospermia (NOA). Male infertility is a common condition affecting approximately 15% of couples, with azoospermia being present in 15% of infertile males (Cocuzza et al., 2013; Esteves et al., 2011a). Treatment for patients with NOA has primarily been limited to surgical sperm retrieval combined with in vitro fertilization intracytoplasmic sperm injection (IVF-ICSI); however, sperm retrieval is successful in only half of these patients, and live birth rates typically range between 10 and 25% (Aljubran et al., 2022). Therefore, a significant need exists for regenerative therapies in this patient population.
IVS has been considered as a model for further understanding the molecular and cellular processes of spermatogenesis and as a potential regenerative therapeutic approach. While 2D cell cultures using human testicular cells have been attempted in previous research, lack of proper spatial arrangement limits germ cell differentiation and maturation, posing challenges for clinical application. Recent research suggests that 3D technology may have advantages for IVS due to mimicry of the native cytoarchitecture of human testicular tissue along with cell-cell communication directly or indirectly. 3D organotypic cultures, scaffolds, organoids, microfluidics, testis-on-a-chip, and bioprinting techniques have all shown potential to contribute to the technology of regenerative treatment strategies, including in vitro fertilization (IVF).
Although promising, further work is needed to develop technology for successful, replicable, and safe IVS for humans. The intersection between tissue engineering, molecular biology, and reproductive medicine in IVS development allows for multidisciplinary involvement, where challenges can be overcome to realize regenerative therapies as a viable option.
围绕体外生精(IVS)的最新进展表明,在未来针对男性非梗阻性无精子症(NOA)的生育治疗中,体外生精有望开创一种新的再生医学模式。男性不育是一种常见病,影响着约15%的夫妇,其中15%的不育男性存在无精子症(Cocuzza等人,2013年;Esteves等人,2011年a)。对无精子症患者的治疗主要局限于手术取精结合体外受精卵胞浆内单精子显微注射(IVF-ICSI);然而,这些患者中只有一半能成功取精,活产率通常在10%到25%之间(Aljubran等人,2022年)。IVS 被认为是进一步了解精子发生的分子和细胞过程的模型,也是一种潜在的再生治疗方法。虽然以前的研究尝试过使用人类睾丸细胞进行二维细胞培养,但由于缺乏适当的空间排列,限制了生殖细胞的分化和成熟,给临床应用带来了挑战。最近的研究表明,三维技术可以模仿人类睾丸组织的原生细胞结构,直接或间接地进行细胞间的交流,因此在 IVS 方面具有优势。三维器官型培养物、支架、器官组织、微流控、芯片睾丸和生物打印技术都显示出对再生治疗策略技术的潜在贡献,包括体外受精(IVF)。组织工程学、分子生物学和生殖医学在体外受精技术开发中的交集使得多学科的参与成为可能,在这种情况下,可以克服挑战,将再生疗法作为一种可行的选择。
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引用次数: 0
Muscle aging and sarcopenia: The pathology, etiology, and most promising therapeutic targets 肌肉老化和肌肉疏松症:病理、病因和最有希望的治疗目标。
IF 8.7 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-22 DOI: 10.1016/j.mam.2024.101319
Mercedes Grima-Terrén , Silvia Campanario , Ignacio Ramírez-Pardo , Andrés Cisneros , Xiaotong Hong , Eusebio Perdiguero , Antonio L. Serrano , Joan Isern , Pura Muñoz-Cánoves
Sarcopenia is a progressive muscle wasting disorder that severely impacts the quality of life of elderly individuals. Although the natural aging process primarily causes sarcopenia, it can develop in response to other conditions. Because muscle function is influenced by numerous changes that occur with age, the etiology of sarcopenia remains unclear. However, recent characterizations of the aging muscle transcriptional landscape, signaling pathway disruptions, fiber and extracellular matrix compositions, systemic metabolomic and inflammatory responses, mitochondrial function, and neurological inputs offer insights and hope for future treatments. This review will discuss age-related changes in healthy muscle and our current understanding of how this can deteriorate into sarcopenia. As our elderly population continues to grow, we must understand sarcopenia and find treatments that allow individuals to maintain independence and dignity throughout an extended lifespan.
肌肉疏松症是一种进行性肌肉萎缩症,严重影响老年人的生活质量。虽然肌肉疏松症主要是由自然衰老过程引起的,但它也可能因其他情况而发生。由于肌肉功能受到随年龄增长而发生的许多变化的影响,因此肌肉疏松症的病因仍不清楚。不过,最近对衰老肌肉转录结构、信号通路干扰、纤维和细胞外基质组成、全身代谢组学和炎症反应、线粒体功能和神经输入等方面的研究,为我们提供了深入的见解,也为未来的治疗带来了希望。本综述将讨论健康肌肉中与年龄有关的变化,以及我们目前对这种变化如何恶化成肌肉疏松症的理解。随着老年人口的不断增长,我们必须了解肌肉疏松症,并找到能让患者在延长的寿命中保持独立和尊严的治疗方法。
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引用次数: 0
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Molecular Aspects of Medicine
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