Pub Date : 2024-09-09DOI: 10.1080/23802359.2024.2399925
Tu Van Nguyen,Thien Duc Luong,Trang Thi Le,Dae-Sung Lee,Moongeun Yoon,Keun-Yong Kim,Biet Thanh Tran,Jiyoung Woo
The marine red alga, Gracilaria eucheumatoides, is economically significant for its agar production and pharmacologically active compounds. This study reveals its complete mitochondrial genome (mitogenome), sequenced using Illumina's next-generation technology. The mitogenome is a 25,909 bp circular molecule with a G + C content of 27.21%, comprising 24 protein-coding genes, two ribosomal RNA genes, 24 transfer RNA genes, and one open reading frame (ORF) with an unidentified function. Both gene structure and composition are highly conserved within Gracilaria. The phylogenetic analyses fully support a close relationship of G. eucheumatoides with other Gracilaria species, as well as its sister relationship with G. urvillei. This mitogenome sequencing effort of G. eucheumatoides provides crucial data for future phylogenetic research on marine red algae.
海洋红藻 Gracilaria eucheumatoides 因其琼脂产量和药用活性化合物而具有重要的经济价值。本研究利用 Illumina 的新一代技术对其完整的线粒体基因组（有丝分裂基因组）进行了测序。线粒体基因组是一个 25,909 bp 的环状分子，G + C 含量为 27.21%，包括 24 个蛋白质编码基因、2 个核糖体 RNA 基因、24 个转运 RNA 基因和 1 个功能不明的开放阅读框（ORF）。基因结构和组成在 Gracilaria 内部高度保守。系统进化分析结果完全支持 G. eucheumatoides 与其他 Gracilaria 物种的密切关系，以及与 G. urvillei 的姊妹关系。此次对欧泉藻丝裂基因组的测序工作为今后海洋红藻的系统发育研究提供了重要数据。
{"title":"Characterization and phylogenetic analysis of the complete mitochondrial genome of the red alga, Gracilaria eucheumatoides Harvey 1860 (Gracilariales: Gracilariaceae) from Vietnam.","authors":"Tu Van Nguyen,Thien Duc Luong,Trang Thi Le,Dae-Sung Lee,Moongeun Yoon,Keun-Yong Kim,Biet Thanh Tran,Jiyoung Woo","doi":"10.1080/23802359.2024.2399925","DOIUrl":"https://doi.org/10.1080/23802359.2024.2399925","url":null,"abstract":"The marine red alga, Gracilaria eucheumatoides, is economically significant for its agar production and pharmacologically active compounds. This study reveals its complete mitochondrial genome (mitogenome), sequenced using Illumina's next-generation technology. The mitogenome is a 25,909 bp circular molecule with a G + C content of 27.21%, comprising 24 protein-coding genes, two ribosomal RNA genes, 24 transfer RNA genes, and one open reading frame (ORF) with an unidentified function. Both gene structure and composition are highly conserved within Gracilaria. The phylogenetic analyses fully support a close relationship of G. eucheumatoides with other Gracilaria species, as well as its sister relationship with G. urvillei. This mitogenome sequencing effort of G. eucheumatoides provides crucial data for future phylogenetic research on marine red algae.","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142213849","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-12DOI: 10.1080/23802359.2024.2391087
Xinhua Wang, Liqiang Wang, Jiaojiao Kong, Na Kong
Lindernia crustacea (L.) F. Muell 1882, a species in the Linderniaceae family, holds traditional medicinal value in China. To investigate its genetic diversity, we assembled, annotated, and charact...
Lindernia crustacea (L.) F. Muell 1882是林下经济科的一个物种，在中国具有传统药用价值。为了研究它的遗传多样性，我们收集、注释并描述了它的...
{"title":"The complete chloroplast genome of Lindernia crustacea (L.) F. Muell 1882 (Linderniaceae) and its phylogenetic analysis","authors":"Xinhua Wang, Liqiang Wang, Jiaojiao Kong, Na Kong","doi":"10.1080/23802359.2024.2391087","DOIUrl":"https://doi.org/10.1080/23802359.2024.2391087","url":null,"abstract":"Lindernia crustacea (L.) F. Muell 1882, a species in the Linderniaceae family, holds traditional medicinal value in China. To investigate its genetic diversity, we assembled, annotated, and charact...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141930035","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-12DOI: 10.1080/23802359.2024.2389918
Shaoyong Deng, Cunzhong Fan, Ziyun Lu, Huilin Yang
Gardenia stenophylla Merr, a member of the genus Gardenia in the family Rubiaceae, possesses significant medicinal and ornamental value and is widely distributed in China. This study reports the ne...
{"title":"The complete chloroplast genome of Gardenia stenophylla Merr (Rubiaceae) and its phylogenetic analysis","authors":"Shaoyong Deng, Cunzhong Fan, Ziyun Lu, Huilin Yang","doi":"10.1080/23802359.2024.2389918","DOIUrl":"https://doi.org/10.1080/23802359.2024.2389918","url":null,"abstract":"Gardenia stenophylla Merr, a member of the genus Gardenia in the family Rubiaceae, possesses significant medicinal and ornamental value and is widely distributed in China. This study reports the ne...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141930034","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In this study, we sequenced the complete mitochondrial genome of the shield-faced leaf-nosed bat (Hipposideros lylei Thomas, 1914) using the Illumina platform. The mitochondrial genome of H. lylei ...
{"title":"The complete mitochondrial genome of the shield-faced leaf-nosed bat from Yunnan Province in China","authors":"Jingying He, Jing Li, Liming Zhao, Tiantian Jiang, Liqun Ma, Yanzhen Bu","doi":"10.1080/23802359.2024.2389936","DOIUrl":"https://doi.org/10.1080/23802359.2024.2389936","url":null,"abstract":"In this study, we sequenced the complete mitochondrial genome of the shield-faced leaf-nosed bat (Hipposideros lylei Thomas, 1914) using the Illumina platform. The mitochondrial genome of H. lylei ...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-08-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141930036","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-09DOI: 10.1080/23802359.2024.2389913
Weiwei Lv, Jiayi Qian, Qian Long, Songting Wang
Typha angustifolia, commonly known as narrowleaf cattail, is a marginal, semi-aquatic, herbaceous perennial species with both ecological and edible values. In this study, the complete chloroplast (...
{"title":"The complete chloroplast genome of Typha angustifolia and its phylogenetic position in Typhaceae","authors":"Weiwei Lv, Jiayi Qian, Qian Long, Songting Wang","doi":"10.1080/23802359.2024.2389913","DOIUrl":"https://doi.org/10.1080/23802359.2024.2389913","url":null,"abstract":"Typha angustifolia, commonly known as narrowleaf cattail, is a marginal, semi-aquatic, herbaceous perennial species with both ecological and edible values. In this study, the complete chloroplast (...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-08-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141930158","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-09DOI: 10.1080/23802359.2024.2386403
I Hyang Kim, Cho Rong Shin, Gyeongmin Kim, Bia Park, Ki Beom Kim, Eun Hwa Choi, Ui Wook Hwang
The chiton (Polyplacophora) occupies a significant position in molluscan evolutionary history as one of the most primitive groups within the phylum Mollusca. Acanthochitona defilippii (Tapparone-Ca...
{"title":"Complete mitochondrial genome of Acanthochitona defilippii (Polyplacophora: Chitonida) from South Korea","authors":"I Hyang Kim, Cho Rong Shin, Gyeongmin Kim, Bia Park, Ki Beom Kim, Eun Hwa Choi, Ui Wook Hwang","doi":"10.1080/23802359.2024.2386403","DOIUrl":"https://doi.org/10.1080/23802359.2024.2386403","url":null,"abstract":"The chiton (Polyplacophora) occupies a significant position in molluscan evolutionary history as one of the most primitive groups within the phylum Mollusca. Acanthochitona defilippii (Tapparone-Ca...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-08-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141930157","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-31DOI: 10.1080/23802359.2024.2386418
Dongxue Wang, Chengwen Li, Lihong Dang
Described originally from Heilongjiang, China, Odontothrips phaseoli is a potential pest of threatening bean plant in northern China. The complete mitochondrial genome of O. phaseoli was sequenced ...
{"title":"Characterizing the complete mitogenome of Odontothrips phaseoli (Thysanoptera: Thripidae) and its mitochondrial phylogeny","authors":"Dongxue Wang, Chengwen Li, Lihong Dang","doi":"10.1080/23802359.2024.2386418","DOIUrl":"https://doi.org/10.1080/23802359.2024.2386418","url":null,"abstract":"Described originally from Heilongjiang, China, Odontothrips phaseoli is a potential pest of threatening bean plant in northern China. The complete mitochondrial genome of O. phaseoli was sequenced ...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141867257","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The species of Carpesium lipskyi C.Winkl. 1998 is an important traditional Chinese medicine in China. In this study, the complete chloroplast (cp) genome of C. lipskyi was determined and analyzed. ...
{"title":"Characterization and phylogenetic analysis of the complete chloroplast genome of Carpesium lipskyi (Asteraceae, Inuleae)","authors":"Tingyu Li, Hui Chen, Xinyu Chen, Tianmeng Qu, Xinyi Zheng, Liang Pang, Xianhua Gu, Zhixi Fu","doi":"10.1080/23802359.2024.2383680","DOIUrl":"https://doi.org/10.1080/23802359.2024.2383680","url":null,"abstract":"The species of Carpesium lipskyi C.Winkl. 1998 is an important traditional Chinese medicine in China. In this study, the complete chloroplast (cp) genome of C. lipskyi was determined and analyzed. ...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141780997","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Leonurus sibiricus Linnaeus 1753, an annual or biennial herb found in northern China, Mongolia, and Russia, typically grows in stony, sandy grasslands, and pine forests. This study sequenced and re...
{"title":"The complete chloroplast genome of Leonurus sibiricus Linnaeus (Labiatae, Leonurus Miller)","authors":"Yan-chang Huang, Wen-xiao Men, Che Bian, He-fei Xue, Wen-juan Hou, Yue-Yue Song, Yan-yun Yang, Liang Xu","doi":"10.1080/23802359.2024.2383673","DOIUrl":"https://doi.org/10.1080/23802359.2024.2383673","url":null,"abstract":"Leonurus sibiricus Linnaeus 1753, an annual or biennial herb found in northern China, Mongolia, and Russia, typically grows in stony, sandy grasslands, and pine forests. This study sequenced and re...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141780998","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-26DOI: 10.1080/23802359.2024.2383686
Haowen Tian, Xiaojun Shi, Hongxiang Zhang
Tamarix hispida Willd. 1816, a crucial native plant species in the arid desert region of northwestern China, plays a significant role in maintaining ecological stability. It is instrumental in addr...
{"title":"Characteristics of the chloroplast genome and genetic divergence of Tamarix hispida Willd. 1816 (Tamaricaceae)","authors":"Haowen Tian, Xiaojun Shi, Hongxiang Zhang","doi":"10.1080/23802359.2024.2383686","DOIUrl":"https://doi.org/10.1080/23802359.2024.2383686","url":null,"abstract":"Tamarix hispida Willd. 1816, a crucial native plant species in the arid desert region of northwestern China, plays a significant role in maintaining ecological stability. It is instrumental in addr...","PeriodicalId":501052,"journal":{"name":"Mitochondrial DNA Part B","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141780996","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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