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A fractional mathematical model for vaccinated humans with the impairment of Monkeypox transmission 接种过猴痘疫苗的人类传播能力受损的分数数学模型
Pub Date : 2024-07-10 DOI: 10.1140/epjs/s11734-024-01211-5
A. Venkatesh, M. Manivel, K. Arunkumar, M. Prakash Raj, Shyamsunder, S. D. Purohit

This research develops a comprehensive numerical model leveraging fuzzy fractional differential equations to analyze the transmission dynamics of the Monkeypox virus. Using Caputo’s fuzzy fractional differential equations, we construct a dynamical model for Monkeypox vaccination in humans. The importance of fuzzy fractional differential equations lies in their ability to provide a more accurate representation of the transmission dynamics due to their non-local properties, which capture memory and hereditary effects inherent in the spread of infectious diseases. Our numerical simulations highlight how vaccination significantly curbs disease spread, demonstrating the practical application of fuzzy fractional techniques in epidemiology. The study underscores the necessity of these advanced mathematical tools in capturing the complex dynamics of Monkeypox transmission, paving the way for more effective control strategies.

本研究利用模糊分式微分方程建立了一个综合数值模型,用于分析猴痘病毒的传播动力学。利用卡普托模糊分数微分方程,我们构建了人类接种猴痘疫苗的动态模型。模糊分式微分方程的重要性在于,由于其非局部特性,它能够更准确地表示传播动态,捕捉到传染病传播过程中固有的记忆和遗传效应。我们的数值模拟突出了疫苗接种如何显著抑制疾病传播,展示了模糊分式技术在流行病学中的实际应用。这项研究强调了这些先进数学工具在捕捉猴痘传播的复杂动态方面的必要性,为制定更有效的控制策略铺平了道路。
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引用次数: 0
Primordial nucleosynthesis with non-extensive statistics 非广延性统计的原始核合成
Pub Date : 2024-07-09 DOI: 10.1140/epjs/s11734-024-01216-0
C. A. Bertulani, Shubhchintak

The conventional Big Bang model successfully anticipates the initial abundances of (^2)H(D), (^3)He, and (^4)He, aligning remarkably well with observational data. However, a persistent challenge arises in the case of (^7)Li, where the predicted abundance exceeds observations by a factor of approximately three. Despite numerous efforts employing traditional nuclear physics to address this incongruity over the years, the enigma surrounding the lithium anomaly endures. In this context, we embark on an exploration of Big Bang nucleosynthesis (BBN) of light element abundances with the application of Tsallis non-extensive statistics. A comparison is made between the outcomes obtained by varying the non-extensive parameter q away from its unity value and both observational data and abundance predictions derived from the conventional big bang model. A good agreement is found for the abundances of (^4)He, (^3)He and (^7)Li, implying that the lithium abundance puzzle might be due to a subtle fine-tuning of the physics ingredients used to determine the BBN. However, the deuterium abundance deviates from observations.

传统的大爆炸模型成功地预测了((^2)H(D))、((^3)He和((^4)He的初始丰度,与观测数据非常吻合。然而,一个持续的挑战出现在 (^7)Li 的情况中,其预测丰度超出观测数据约三倍。尽管多年来人们运用传统核物理解决这一不协调问题的努力不计其数,但围绕锂异常的谜团依然存在。在此背景下,我们开始应用查利斯(Tsallis)非广延性统计对大爆炸核合成(BBN)轻元素丰度进行探索。通过改变非广延性参数 q,使其偏离其统一值,我们对观测数据和传统大爆炸模型得出的丰度预测结果进行了比较。结果发现,(^4)He、(^3)He 和(^7)Li 的丰度有很好的一致性,这意味着锂丰度之谜可能是由于用于确定大爆炸模型的物理成分的微妙微调造成的。然而,氘丰度偏离了观测结果。
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引用次数: 0
Unsupervised and lightly supervised learning in particle physics 粒子物理学中的无监督和轻监督学习
Pub Date : 2024-07-08 DOI: 10.1140/epjs/s11734-024-01235-x
Jai Bardhan, Tanumoy Mandal, Subhadip Mitra, Cyrin Neeraj, Monalisa Patra

We review the main applications of machine learning models that are not fully supervised in particle physics, i.e., clustering, anomaly detection, detector simulation, and unfolding. Unsupervised methods are ideal for anomaly detection tasks—machine learning models can be trained on background data to identify deviations if we model the background data precisely. The learning can also be partially unsupervised when we can provide some information about the anomalies at the data level. Generative models are useful in speeding up detector simulations—they can mimic the computationally intensive task without large resources. They can also efficiently map detector-level data to parton-level data (i.e., data unfolding). In this review, we focus on interesting ideas and connections and briefly overview the underlying techniques wherever necessary.

我们回顾了非完全监督的机器学习模型在粒子物理中的主要应用,即聚类、异常检测、探测器模拟和展开。无监督方法是异常检测任务的理想选择--如果我们对背景数据进行精确建模,机器学习模型可以在背景数据上进行训练,从而识别偏差。如果我们能提供一些数据层面的异常信息,那么学习也可以是部分无监督的。生成模型在加速探测器模拟方面非常有用--它们可以在不需要大量资源的情况下模拟计算密集型任务。它们还能有效地将探测器级数据映射到粒子级数据(即数据展开)。在这篇综述中,我们将重点讨论有趣的想法和联系,并在必要时简要概述基础技术。
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引用次数: 0
Complex dynamics of a fractional-order delayed epidemic model incorporating waning immunity and optimal control 包含免疫力减弱和优化控制的分数阶延迟流行病模型的复杂动力学
Pub Date : 2024-07-08 DOI: 10.1140/epjs/s11734-024-01221-3
Suvankar Majee, Soovoojeet Jana, T. K. Kar, Bidhan Bhunia

To explore the effect of memory, we first incorporate the fractional-order derivative in our defined model, which is a SIR-type epidemic model with logistic growth in susceptible and incubation delay in saturated incidence rate. Based on the value of a threshold parameter (R_0), called basic reproduction number, there exist two equilibria. Also, depending on that threshold value, stability and Hopf bifurcation analysis were performed in our formulated model. To study the effects of vaccination and treatment on Hopf bifurcation, we include these measures in our model and derive that these measures may increase the length of the critical delay. We also looked into a fractional-order optimal control problem to better understand the optimal role of treatment and vaccination in reducing disease prevalence and lowering associated costs. We have run simulations to verify the analytical results, considering the model’s feasible parameter values. Finally, to study the uncertainty analysis, we have used the partial rank correlation coefficient technique.

为了探索记忆的影响,我们首先在定义的模型中加入了分数阶导数,该模型是一个 SIR 型流行病模型,易感者呈对数增长,饱和发病率呈潜伏延迟。根据阈值参数 (R_0)(称为基本繁殖数)的值,存在两个均衡点。同时,根据该临界值,我们对所建立的模型进行了稳定性和霍普夫分岔分析。为了研究疫苗接种和治疗对霍普夫分岔的影响,我们在模型中加入了这些措施,并得出这些措施可能会增加临界延迟的长度。我们还研究了分数阶最优控制问题,以更好地理解治疗和疫苗接种在减少疾病流行和降低相关成本方面的最佳作用。考虑到模型的可行参数值,我们进行了模拟来验证分析结果。最后,为了研究不确定性分析,我们使用了偏等级相关系数技术。
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引用次数: 0
How deep learning is complementing deep thinking in ATLAS 深度学习如何与 ATLAS 的深度思考相辅相成
Pub Date : 2024-07-05 DOI: 10.1140/epjs/s11734-024-01238-8
Deepak Kar

ATLAS collaboration uses machine learning (ML) algorithms in many different ways in its physics programme, starting from object reconstruction, simulation of calorimeter showers, signal to background discrimination in searches and measurements, tagging jets based on their origin and so on. Anomaly detection (AD) techniques are also gaining popularity where they are used to find hidden patterns in the data, with lesser dependence on simulated samples as in the case of supervised learning-based methods. ML methods used in detector simulation and in jet tagging in ATLAS will be discussed, along with four searches using ML/AD techniques.

ATLAS 合作组织在其物理计划中以多种不同方式使用机器学习(ML)算法,包括天体重构、模拟量热计阵雨、搜索和测量中的信号与背景判别、根据喷流的起源对其进行标记等。异常检测(AD)技术也越来越受欢迎,它们被用来发现数据中隐藏的模式,而不像基于监督学习的方法那样依赖模拟样本。将讨论探测器模拟和 ATLAS 喷射标记中使用的 ML 方法,以及使用 ML/AD 技术进行的四次搜索。
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引用次数: 0
A robust study of the dynamics of tumor–immune interaction for public health via fractional framework 通过分数框架对肿瘤-免疫相互作用动态进行稳健研究,促进公共健康
Pub Date : 2024-07-05 DOI: 10.1140/epjs/s11734-024-01210-6
Meshal Shutaywi, Zahir Shah, Rashid Jan

It is evident that a tumor is a dangerous lump of tissue developed through the uncontrollable division of cells, replacing healthy tissue with abnormal tissue. It is cancerous and spreads through the lymphatic system or blood within the body of a host individual while the human immune system, consisting of interrelated special cells, tissues, and organs, is employed for the protection of the body from microorganisms, foreign diseases, infections, and toxins. Thus, the conceptualization and understanding of the intersections of tumor–immune cells are valuable. In this article, the natural process of tumor–immune cell interactions is formulated through a mathematical framework. The intricate dynamics of tumor–immune interactions are then represented by means of operators of fractional calculus involving nonlocal and nonsingular kernels. The definitions and basic properties of non-integer derivatives are introduced for the investigation of the proposed system. In addition, a new numerical scheme is introduced for the dynamics, showing the chaos and oscillation of the tumor–immune system. The proposed dynamics of tumor–immune interaction are highlighted with the effect of different input factors. Our findings not only contribute to a thorough comprehension of the complex interactions between input parameters and tumor dynamics, but critical factors that have a major impact on the dynamics are also identified. These outcomes are pivotal for refining and optimizing the proposed system to enhance its predictive accuracy and efficacy in modeling tumor behavior.

很明显,肿瘤是一种危险的组织肿块,它是通过细胞不受控制的分裂形成的,用异常组织取代健康组织。人体免疫系统由相互关联的特殊细胞、组织和器官组成,用于保护人体免受微生物、外来疾病、感染和毒素的侵害。因此,对肿瘤-免疫细胞交叉的概念和理解很有价值。本文通过数学框架阐述了肿瘤-免疫细胞相互作用的自然过程。然后通过涉及非局部和非奇异核的分数微积分算子来表示肿瘤-免疫相互作用的复杂动态。为研究拟议系统,介绍了非整数导数的定义和基本性质。此外,还介绍了一种新的动力学数值方案,显示了肿瘤免疫系统的混沌和振荡。在不同输入因素的影响下,所提出的肿瘤-免疫相互作用动力学得到了强调。我们的研究结果不仅有助于深入理解输入参数与肿瘤动力学之间复杂的相互作用,还找出了对动力学有重大影响的关键因素。这些结果对于完善和优化所提出的系统,以提高其预测准确性和肿瘤行为建模的有效性至关重要。
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引用次数: 0
Dynamics of crystals in metastable liquids with applications to the growth of polypeptide hormones 晶体在易变质液体中的动力学及其在多肽激素生长中的应用
Pub Date : 2024-07-04 DOI: 10.1140/epjs/s11734-024-01226-y
Dmitri V. Alexandrov, Alexander A. Ivanov, Irina V. Alexandrova, Eugenya V. Makoveeva

This study is concerned with the dynamics of a polydisperse ensemble of crystals in a single-component metastable solution/melt. A new theory based on the kinetic and balance equations is developed for the description of initial and intermediate stages of bulk crystallization. Such phenomena as unsteady growth rates of individual crystals with fluctuations, diffusion of the crystal-size distribution function in the space of particle radii, the Gibbs–Thomson and atomic kinetics effects, various crystal nucleation mechanisms are taken into account. The analytical solution is constructed in a parametric form with the modified time being the decision variable. Namely, the metastability degree, particle-radius distribution function, crystallization time, total number of crystals and their mean size are found as the functions of decision variable. The analytical solutions show that the metastability degree decreases with time as a result of liquid desupersaturation/desupercooling. As this takes place, the particle-radius distribution function moves to greater particle radii, becomes wider and lower with increasing the crystallization time. The theory is tested against experiments on the growth of such polypeptide hormones as porcine and bovine insulins. We show that the theory is in good agreement with the experimental data.

本研究涉及单组分可蜕变溶液/熔体中多分散晶体集合体的动力学。在动力学和平衡方程的基础上开发了一种新的理论,用于描述块状结晶的初始和中间阶段。该理论考虑了具有波动的单个晶体的不稳定增长率、晶体尺寸分布函数在粒子半径空间中的扩散、吉布斯-汤姆森效应和原子动力学效应、各种晶体成核机制等现象。分析解是以参数形式构建的,修正时间是决定变量。即,将蜕变度、粒子半径分布函数、结晶时间、晶体总数及其平均尺寸作为决策变量的函数。分析结果表明,由于液体去饱和/去过冷,转移度会随着时间的推移而降低。随着结晶时间的延长,颗粒半径分布函数会向更大的颗粒半径移动,变得更宽且更低。该理论通过猪和牛胰岛素等多肽激素的生长实验进行了检验。结果表明,该理论与实验数据十分吻合。
{"title":"Dynamics of crystals in metastable liquids with applications to the growth of polypeptide hormones","authors":"Dmitri V. Alexandrov, Alexander A. Ivanov, Irina V. Alexandrova, Eugenya V. Makoveeva","doi":"10.1140/epjs/s11734-024-01226-y","DOIUrl":"https://doi.org/10.1140/epjs/s11734-024-01226-y","url":null,"abstract":"<p>This study is concerned with the dynamics of a polydisperse ensemble of crystals in a single-component metastable solution/melt. A new theory based on the kinetic and balance equations is developed for the description of initial and intermediate stages of bulk crystallization. Such phenomena as unsteady growth rates of individual crystals with fluctuations, diffusion of the crystal-size distribution function in the space of particle radii, the Gibbs–Thomson and atomic kinetics effects, various crystal nucleation mechanisms are taken into account. The analytical solution is constructed in a parametric form with the modified time being the decision variable. Namely, the metastability degree, particle-radius distribution function, crystallization time, total number of crystals and their mean size are found as the functions of decision variable. The analytical solutions show that the metastability degree decreases with time as a result of liquid desupersaturation/desupercooling. As this takes place, the particle-radius distribution function moves to greater particle radii, becomes wider and lower with increasing the crystallization time. The theory is tested against experiments on the growth of such polypeptide hormones as porcine and bovine insulins. We show that the theory is in good agreement with the experimental data.</p>","PeriodicalId":501403,"journal":{"name":"The European Physical Journal Special Topics","volume":"39 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141548968","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fractional-calculus analysis of the dynamics of $$text {CD4}^{+}$$ T cells and human immunodeficiency viruses 对 $$text {CD4}^{+}$ T 细胞和人类免疫缺陷病毒动态的分数微积分分析
Pub Date : 2024-07-04 DOI: 10.1140/epjs/s11734-024-01192-5
Abdulrahman Obaid Alshammari, Imtiaz Ahmad, Rashid Jan, Sahar Ahmed Idris

Combination antiretroviral Therapy (cART) is the standard treatment approach for human immunodeficiency virus (HIV), involving the use of various antiretroviral drugs to effectively suppress the virus’s replication in the body. The objective of cART is to decrease the viral load in the blood to undetectable levels, enhance the immune system’s function, and ultimately prolong the patient’s life by preventing the progression to AIDS and associated opportunistic infections. In this work, we formulated the dynamics of HIV infection, including the effects of cART, within a fractional framework. This paper presents a numerical study that investigates the complex dynamics of HIV infection in (text {CD4}^{+}) T cells. The proposed HIV model incorporates the impact of antiretroviral medication via the Caputo–Fabrizio derivative. To comprehend the dynamics of the proposed HIV infection model, a numerical approach is employed. The dynamic behavior of the system is illustrated by examining the influence of various input parameters, aiming to capture the system’s sensitivity to these factors. Furthermore, this modeling approach highlights the interaction between the immune system and the virus. Through numerical simulations utilizing specific input values, we explore the chaotic and periodic behavior of HIV infection and provide insights into its intricate dynamics.

抗逆转录病毒联合疗法(cART)是人类免疫缺陷病毒(HIV)的标准治疗方法,通过使用各种抗逆转录病毒药物来有效抑制病毒在体内的复制。抗逆转录病毒疗法的目的是将血液中的病毒载量降至检测不到的水平,增强免疫系统的功能,最终通过防止发展为艾滋病和相关的机会性感染来延长患者的生命。在这项工作中,我们在分数框架内制定了 HIV 感染的动力学,包括 cART 的影响。本文介绍了一项数值研究,研究了 HIV 在 (text {CD4}^{+}) T 细胞中感染的复杂动态。所提出的 HIV 模型通过 Caputo-Fabrizio 衍生物纳入了抗逆转录病毒药物的影响。为了理解所提出的 HIV 感染模型的动态,我们采用了数值方法。通过研究各种输入参数的影响来说明系统的动态行为,旨在捕捉系统对这些因素的敏感性。此外,这种建模方法还突出了免疫系统与病毒之间的相互作用。通过利用特定输入值进行数值模拟,我们探索了艾滋病病毒感染的混沌和周期性行为,并对其错综复杂的动态过程提出了见解。
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引用次数: 0
Stochastic nonlinear model for nanoparticles and viruses escape from endosomes 纳米粒子和病毒从内体逃逸的随机非线性模型
Pub Date : 2024-07-03 DOI: 10.1140/epjs/s11734-024-01228-w
Vladimir Sholokhov, Eugenya V. Makoveeva, Sergei Fedotov, Dmitri V. Alexandrov

A stochastic nonlinear model for Rab5 and Rab7 proteins describing the transformation of early endosomes into late endosomes was formulated. This model consists of two stochastic nonlinear differential equations for Rab5 and Rab7 protein levels on the endosome surface. The primary goal of this paper is to understand the impact of multiplicative noise on the nonlinear dynamics of Rab5 and Rab7. The main idea is to introduce the stochastic variable T, which defines the random time when the conversion from Rab5 to Rab7 occurs. It follows from the dynamics of pH level that T can also be considered as the escape time of pH-sensitive nanoparticles and viruses from endosomes. The probability density function for T was obtained numerically. It was shown that the average conversion time T is shifted to the right when compared to the deterministic one, potentially influencing the pH distribution function and, consequently, the average escape time of viruses and nanoparticles.

我们建立了一个描述早期内体向晚期内体转化过程的 Rab5 和 Rab7 蛋白随机非线性模型。该模型由内体表面 Rab5 和 Rab7 蛋白水平的两个随机非线性微分方程组成。本文的主要目的是了解乘法噪声对 Rab5 和 Rab7 非线性动力学的影响。主要思路是引入随机变量 T,它定义了从 Rab5 到 Rab7 转换发生的随机时间。根据 pH 值的动态变化,T 也可视为对 pH 值敏感的纳米粒子和病毒从内体逃逸的时间。通过数值计算得到了 T 的概率密度函数。结果表明,与确定性时间相比,平均转换时间 T 右移,这可能会影响 pH 分布函数,进而影响病毒和纳米粒子的平均逃逸时间。
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引用次数: 0
The role of astronomical forcing on stochastically induced climate dynamics 天文因素对随机诱导气候动力学的作用
Pub Date : 2024-07-03 DOI: 10.1140/epjs/s11734-024-01231-1
Dmitri V. Alexandrov, Irina A. Bashkirtseva, Lev B. Ryashko

This study is concerned with the influence of astronomical forcing and stochastic disturbances on non-linear dynamics of the Earth’s climate. As a starting point, we take the system of climate equations derived by Saltzman and Maasch for late Cenozoic climate changes. This system contains variations of three prognostic variables: the global ice mass, carbon dioxide concentration, and deep ocean temperature. The bifurcation diagram of deterministic system shows possible existence/coexistence of stable equilibria and limit cycle leading either to monostability or bistability. Fitting the astronomical forcing by an oscillatory function and representing the deep ocean temperature deviations by means of white Gaussian noise of various intensities, we analyze the corresponding stochastic system of Saltzman and Maasch equations for the deviations of prognostic variables from their average values (equilibrium state). The main conclusions of our study are as follows: (i) astronomical forcing causes the climate system transitions from large-amplitude oscillations to small-amplitude ones and vice versa; (ii) astronomical and stochastic forcings together cause the mixed-mode climate oscillations with intermittent large and small amplitudes. In this case, the Earth’s climate would be shifting from one stable equilibrium with a warmer climate to another stable equilibrium with a colder climate and back again.

本研究关注天文强迫和随机扰动对地球气候非线性动力学的影响。我们以 Saltzman 和 Maasch 针对新生代晚期气候变化推导出的气候方程系统为起点。该系统包含三个预报变量的变化:全球冰量、二氧化碳浓度和深海温度。确定性系统的分岔图显示了可能存在/共存的稳定平衡和导致单稳态或双稳态的极限循环。我们用振荡函数拟合天文强迫,用不同强度的白高斯噪声表示深海温度偏差,分析了预报变量偏离其平均值(平衡态)的相应萨尔茨曼和马什方程随机系统。研究的主要结论如下(i) 天文作用力导致气候系统从大振幅振荡过渡到小振幅振荡,反之亦然;(ii) 天文作用力和随机作用力共同导致间歇性大振幅和小振幅的混合模式气候振荡。在这种情况下,地球气候将从一个气候变暖的稳定平衡转向另一个气候变冷的稳定平衡,然后再返回。
{"title":"The role of astronomical forcing on stochastically induced climate dynamics","authors":"Dmitri V. Alexandrov, Irina A. Bashkirtseva, Lev B. Ryashko","doi":"10.1140/epjs/s11734-024-01231-1","DOIUrl":"https://doi.org/10.1140/epjs/s11734-024-01231-1","url":null,"abstract":"<p>This study is concerned with the influence of astronomical forcing and stochastic disturbances on non-linear dynamics of the Earth’s climate. As a starting point, we take the system of climate equations derived by Saltzman and Maasch for late Cenozoic climate changes. This system contains variations of three prognostic variables: the global ice mass, carbon dioxide concentration, and deep ocean temperature. The bifurcation diagram of deterministic system shows possible existence/coexistence of stable equilibria and limit cycle leading either to monostability or bistability. Fitting the astronomical forcing by an oscillatory function and representing the deep ocean temperature deviations by means of white Gaussian noise of various intensities, we analyze the corresponding stochastic system of Saltzman and Maasch equations for the deviations of prognostic variables from their average values (equilibrium state). The main conclusions of our study are as follows: (i) astronomical forcing causes the climate system transitions from large-amplitude oscillations to small-amplitude ones and vice versa; (ii) astronomical and stochastic forcings together cause the mixed-mode climate oscillations with intermittent large and small amplitudes. In this case, the Earth’s climate would be shifting from one stable equilibrium with a warmer climate to another stable equilibrium with a colder climate and back again.</p>","PeriodicalId":501403,"journal":{"name":"The European Physical Journal Special Topics","volume":"5 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141526001","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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The European Physical Journal Special Topics
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