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Crocetin Delays Brain and Body Aging by Increasing Cellular Energy Levels in Aged C57BL/6J Mice 藏红花酸通过提高老年 C57BL/6J 小鼠的细胞能量水平延缓大脑和身体衰老
Pub Date : 2024-09-11 DOI: 10.1021/acsptsci.4c00151
Sushil Choudhary, Vishnu Kumar, Kuhu Sharma, Abhishek Gour, Ashish Sahrawat, Anshika Jotshi, Diksha Manhas, Utpal Nandi, Sandip B. Bharate, Zabeer Ahmed, Ajay Kumar
Aging is usually accompanied by mitochondrial dysfunction, reduced energy levels, and cell death in the brain and other tissues. Mitochondria play a crucial role in maintaining cellular energy through oxidative phosphorylation (OXPHOS). However, OXPHOS is impaired as the mitochondrial oxygen supply decreases with age. We explored whether pharmacologically increased oxygen diffusion by crocetin can restore OXPHOS and help delay the aging of the brain and other vital organs. We found that aged mice treated with crocetin for four months displayed significantly improved memory behavior, neuromuscular coordination, and ATP and NAD+ levels in the brain and other vital organs, leading to an increased median life span. The transcriptomic analysis of hippocampi from crocetin-treated mice revealed that enhanced brain energy level was caused by the upregulation of genes linked to OXPHOS, and their expression was close to that in young mice. The chronic treatment of aged astrocytes also showed improved mitochondrial membrane potential and energy state of the cells. Moreover, chronic treatment with crocetin did not cause any oxidative stress. Our data suggest that restoring OXPHOS and the normal energy state of the cell can delay aging and enhance longevity. Therefore, molecules such as crocetin should be further explored to treat age-related diseases.
衰老通常伴随着线粒体功能障碍、能量水平降低以及大脑和其他组织的细胞死亡。线粒体通过氧化磷酸化(OXPHOS)在维持细胞能量方面发挥着至关重要的作用。然而,随着年龄的增长,线粒体的供氧量减少,OXPHOS 的作用也随之减弱。我们探讨了通过药理学方法增加西番莲素的氧扩散是否能恢复 OXPHOS 并帮助延缓大脑和其他重要器官的衰老。我们发现,使用西西替酯治疗四个月的老年小鼠在记忆行为、神经肌肉协调性、大脑和其他重要器官的 ATP 和 NAD+ 水平等方面都有明显改善,从而延长了小鼠的中位寿命。克罗西汀治疗小鼠海马的转录组分析表明,大脑能量水平的提高是由与氧合磷酸酶相关的基因上调引起的,这些基因的表达与年轻小鼠接近。对老年星形胶质细胞的慢性治疗也显示出线粒体膜电位和细胞能量状态的改善。此外,用鳄梨素进行慢性治疗不会引起任何氧化应激。我们的数据表明,恢复细胞的 OXPHOS 和正常能量状态可以延缓衰老,延年益寿。因此,应该进一步探索用鳄梨素等分子来治疗与年龄有关的疾病。
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引用次数: 0
Digitally Enabled Generic Analytical Framework Accelerating the Pace of Liquid Chromatography Method Development for Vaccine Adjuvant Formulations 数字化通用分析框架加快了疫苗佐剂制剂液相色谱法的开发速度
Pub Date : 2024-09-11 DOI: 10.1021/acsptsci.4c00306
Mohamed Hemida, Rodell C. Barrientos, Caleb Kinsey, Nathan Kuster, Mayank Bhavsar, Armen G. Beck, Heather Wang, Andrew Singh, Pankaj Aggarwal, Arthur Arcinas, Malini Mukherjee, Emmanuel Appiah-Amponsah, Erik L. Regalado
The growing use of adjuvants in the fast-paced formulation of new vaccines has created an unprecedented need for meaningful analytical assays that deliver reliable quantitative data from complex adjuvant and adjuvant–antigen mixtures. Due to their complex chemical and physical properties, method development for the separation of vaccine adjuvants is considered a highly challenging and laborious task. Reversed-phase liquid chromatography (RPLC) is among the most important tests in the (bio)pharmaceutical industry for release and stability indicating measurements including adjuvant content, identity, and purity profile. However, the time constraints of developing “on-demand” robust quantitative methods prior to each change in formulation can easily lead to sample analysis becoming a bottleneck in vaccine development. Herein, a simple and efficient generic analytical framework capable of chromatographically resolving the most commonly used non-aluminum-based adjuvants across academic and industrial sectors is introduced. This was designed to seek a more proactive approach for fast-paced assay development endeavors that evolved from extensive stationary phase screening in conjunction with multifactorial in silico simulations of adjuvant retention time (RT) as a function of gradient time, temperature, organic modifier blending, and buffer concentration. The multifactorial retention models yield 3D resolution maps with excellent baseline separation of all adjuvants in a single run, which was found to be very accurate, with differences between experimental and simulated retention times of less than 1%. The analytical framework described here also includes the introduction of a more versatile approach to method development by introducing a dynamic RT database for adjuvants covering the entire library of adjuvants with broad mechanisms of action across numerous vaccine formulations with excellent linearity, accuracy, precision, and specificity. The power of this framework was also demonstrated with numerous analytical assays that can be generated rapidly from simulations guiding vaccine processes in the development of new adjuvant formulations. Analytical assay in this work covers content, purity profile by LC with diode array detector (DAD) and charged aerosol detector (CAD), and component identification by LC with mass spectrometry (MS) across complex vaccine formulations, including the use of surfactants (e.g., polysorbates) as well as their separation from adjuvant targets.
随着佐剂在新型疫苗快速配制过程中的使用日益增多,对能够从复杂的佐剂和佐剂-抗原混合物中获得可靠定量数据的分析检测方法的需求空前高涨。由于其复杂的化学和物理特性,疫苗佐剂的分离方法开发被认为是一项极具挑战性的艰巨任务。反相液相色谱法(RPLC)是(生物)制药行业最重要的释放和稳定性指示测量方法之一,包括佐剂含量、特性和纯度曲线。然而,在每次改变配方之前开发 "按需 "稳健定量方法的时间限制很容易导致样品分析成为疫苗开发的瓶颈。本文介绍了一种简单高效的通用分析框架,能够对学术界和工业界最常用的非铝基佐剂进行色谱分析。该框架旨在为快节奏的检测开发工作寻求一种更积极主动的方法,它由广泛的固定相筛选和佐剂保留时间(RT)与梯度时间、温度、有机改性剂混合和缓冲液浓度的函数关系的多因素硅学模拟演化而来。多因素保留模型可生成三维分辨率图,一次运行即可对所有佐剂进行出色的基线分离,而且非常精确,实验保留时间与模拟保留时间之间的差异小于 1%。这里描述的分析框架还包括引入一种更通用的方法开发,即引入一个动态 RT 数据库,该数据库涵盖了整个佐剂库,这些佐剂具有广泛的作用机制,适用于多种疫苗制剂,并具有极佳的线性度、准确度、精确度和特异性。在开发新佐剂配方的过程中,还可以通过模拟指导疫苗流程,快速生成大量分析检测结果,从而展示了这一框架的强大功能。这项工作中的分析测试涵盖了复杂疫苗配方中的成分含量、通过液相色谱法与二极管阵列检测器(DAD)和带电气溶胶检测器(CAD)进行的纯度分析,以及通过液相色谱法与质谱法(MS)进行的成分鉴定,包括表面活性剂(如聚山梨醇酯)的使用及其与佐剂目标的分离。
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引用次数: 0
Innovative Approaches and Future Directions in the Management and Understanding of Varicose Veins: A Systematic Review 管理和了解静脉曲张的创新方法和未来方向:系统回顾
Pub Date : 2024-09-09 DOI: 10.1021/acsptsci.4c00430
Aaqib Javaid, Abutwaibe KA, Sherilraj PM, Kanika Arora, Shyam Lal Mudavath
Varicose veins, a prevalent condition that primarily affects the lower limbs, present significant hurdles in diagnosis and treatment due to their diverse causes. This study dives into the complex hormonal, environmental, and molecular elements that influence varicose vein genesis, emphasizing the need for precise diagnostic methods and changing therapy approaches to improve patient outcomes. It investigates the epidemiology and demographic distribution of varicose veins, delves into their pathophysiology, and assesses diagnostic methods such as duplex ultrasonography and the CEAP classification system. In addition, the study discusses novel therapies such as sclerotherapy and endovenous thermal ablation, as well as the effectiveness of existing diagnostic methods in detecting chronic venous illnesses. By investigating venous wall remodeling and inflammatory pathways, it gives a thorough knowledge of varicose vein formation. The study calls for future research that focuses on patient-centered methods, bioengineering advances, digital health applications, and genetic and molecular studies to improve the accuracy and effectiveness of vascular therapy. As a result, a multidisciplinary literature analysis was done, drawing on insights from vascular medicine, epidemiology, genetics, and pharmacology, to consolidate existing knowledge and identify possibilities to enhance varicose vein diagnosis, treatment, and patient care outcomes.
静脉曲张是一种主要影响下肢的常见疾病,由于其病因多种多样,给诊断和治疗带来了巨大障碍。本研究深入探讨了影响静脉曲张成因的复杂荷尔蒙、环境和分子因素,强调了精确诊断方法和改变治疗方法以改善患者预后的必要性。研究调查了静脉曲张的流行病学和人口分布情况,深入探讨了静脉曲张的病理生理学,并对双相超声波检查和 CEAP 分类系统等诊断方法进行了评估。此外,该研究还讨论了硬化疗法和静脉腔内热消融术等新型疗法,以及现有诊断方法在检测慢性静脉疾病方面的有效性。通过对静脉壁重塑和炎症途径的研究,该研究对静脉曲张的形成有了全面的了解。该研究呼吁未来的研究应侧重于以患者为中心的方法、生物工程的进步、数字健康应用以及基因和分子研究,以提高血管治疗的准确性和有效性。因此,我们借鉴血管医学、流行病学、遗传学和药理学的见解,进行了一次多学科文献分析,以整合现有知识,找出提高静脉曲张诊断、治疗和患者护理效果的可能性。
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引用次数: 0
A Cellulose-Rich Diet Disrupts Gut Homeostasis and Leads to Anxiety through the Gut-Brain Axis 富含纤维素的饮食会破坏肠道平衡,并通过肠道-大脑轴导致焦虑症
Pub Date : 2024-09-09 DOI: 10.1021/acsptsci.4c00270
Kaede Ito, Haruka Hosoki, Yuya Kasai, Hiroyuki Sasaki, Atsushi Haraguchi, Shigenobu Shibata, Chihiro Nozaki
It is widely said that a healthy intestinal environment plays an essential role in better mental condition. One known dietary nutrient that maintains the intestinal environment is dietary fiber. A recent study showed that maintaining the intestinal environment with dietary fiber alleviated symptoms of psychiatric disorders in animals. However, such effects have only been reported with soluble fiber, which is highly fermentable and promotes short-chain fatty acid (SCFA) production, and not with insoluble fiber. Therefore, we aimed to verify whether insoluble fiber, such as cellulose, can alter emotion via changes in the gut. We divided mice into two groups and fed either a standard diet (SD, which contains both insoluble and soluble dietary fibers) or a cellulose-rich diet (CRD, which contains cellulose alone as the dietary fibers). We found that CRD-fed mice display increased anxiety-like behavior. CRD-fed animals also showed decreased intestinal SCFA levels along with increased intestinal permeability, dysmotility, and hypersensitivity. This behavioral and physiological effect of CRD has been completely abolished in vagotomized mice, indicating the direct link between intestinal environment exacerbation to the emotion through the gut-brain axis. Additionally, we found that amygdalar dopamine signaling has been modified in CRD-fed animals, and the opioid antagonist abolished this dopaminergic modification as well as CRD-induced anxiety. Altogether, our findings indicate that consumption of cellulose alone as the dietary fiber may evoke intestinal abnormalities, which fire the vagus nerve, then the opioidergic system, and amygdalar dopamine upregulation, resulting in the enhancement of anxiety.
人们普遍认为,健康的肠道环境对改善精神状态起着至关重要的作用。膳食纤维是一种已知的能维持肠道环境的膳食营养素。最近的一项研究表明,用膳食纤维维持肠道环境可减轻动物的精神紊乱症状。然而,仅有报道称可溶性纤维具有这种效果,因为可溶性纤维可高度发酵并促进短链脂肪酸(SCFA)的产生,而不溶性纤维则没有这种效果。因此,我们旨在验证纤维素等不溶性纤维是否能通过肠道变化改变情绪。我们将小鼠分为两组,分别喂食标准饮食(SD,同时含有不溶性和可溶性膳食纤维)或富含纤维素的饮食(CRD,仅含有纤维素作为膳食纤维)。我们发现,喂食 CRD 的小鼠表现出更多的焦虑行为。喂食 CRD 的动物还表现出肠道 SCFA 水平下降,肠道渗透性、运动障碍和过敏性增加。CRD的这种行为和生理效应在迷走神经切断的小鼠中完全消失,这表明肠道环境恶化与情绪之间通过肠脑轴有直接联系。此外,我们还发现,杏仁多巴胺信号在摄入CRD的动物中发生了改变,而阿片类拮抗剂可以消除这种多巴胺能改变以及CRD诱导的焦虑。总之,我们的研究结果表明,单独摄入纤维素作为膳食纤维可能会引起肠道异常,从而刺激迷走神经,继而刺激阿片能系统和杏仁多巴胺上调,导致焦虑增强。
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引用次数: 0
Challenges and Opportunities for Consideration of Efavirenz Drug Repurposing for Alzheimer’s Disease Therapeutics 考虑将依非韦伦药物重新用于阿尔茨海默病治疗的挑战与机遇
Pub Date : 2024-09-06 DOI: 10.1021/acsptsci.4c00229
Ben Boyarko, Sonia Podvin, Barry Greenberg, Steven Arnold, Almudena Maroto Juanes, Rik van der Kant, Lawrence Goldstein, Jeremiah D. Momper, Anne Bang, James Silverman, Howard H. Feldman, Vivian Hook
Therapeutic research and development for Alzheimer’s disease (AD) has been an area of intense research to alleviate memory loss and neurodegeneration. There is growing interest in drug repositioning and repurposing strategies for FDA-approved medications as potential candidates that may further advance AD therapeutics. The FDA drug efavirenz has been investigated as a candidate drug for repurposing as an AD medication. The proposed mechanism of action of efavirenz (at low doses) is the activation of the neuron-specific enzyme CYP46A1 that converts excess brain cholesterol into 24-hydroxycholesterol (24-HC) that is exported to the periphery. Efavirenz at a low dose was found to improve memory deficit in the 5XFAD model of AD that was accompanied by elevated 24-HC and reduction in Aβ; furthermore, efavirenz reduced pTau and excess cholesterol levels in human iPSC-derived Alzheimer’s neurons. The low dose of efavirenz used in the AD mouse model to increase 24-HC contrasts with the use of more than 100-fold higher doses of efavirenz for clinical treatment of human immunodeficiency virus (HIV) through inhibition of reverse transcriptase. Low doses of efavirenz may avoid neurotoxic adverse effects that occur at high efavirenz doses used for HIV treatment. This review evaluates the drug properties of efavirenz with respect to its preclinical data on regulating memory deficit, pharmacokinetics, pharmacodynamics, metabolites, and genetic variabilities in drug metabolism as well as its potential adverse effects. These analyses discuss the challenges and questions that should be addressed in future studies to consider the opportunity for low dose efavirenz as a candidate for AD drug development.
针对阿尔茨海默病(AD)的治疗研究和开发一直是缓解记忆丧失和神经变性的热门研究领域。人们对美国食品及药物管理局(FDA)批准的药物的重新定位和再利用战略越来越感兴趣,因为这些潜在的候选药物可能会进一步推动阿兹海默症的治疗。美国食品及药物管理局批准的药物依非韦伦已被作为一种候选药物进行了研究,以便作为一种抗注意力缺失症药物进行再利用。依非韦伦(低剂量)的作用机制是激活神经元特异性酶 CYP46A1,该酶可将过量的脑胆固醇转化为 24-HC 输出到外周。研究发现,低剂量的依非韦伦能改善 5XFAD 阿尔茨海默病模型的记忆缺陷,这种缺陷伴随着 24-HC 的升高和 Aβ 的减少;此外,依非韦伦还能降低 pTau 和源自人类 iPSC 的阿尔茨海默氏症神经元中过量胆固醇的水平。在AD小鼠模型中使用低剂量的依非韦伦来增加24-HC,这与临床上通过抑制逆转录酶来治疗人类免疫缺陷病毒(HIV)所使用的高100倍以上剂量的依非韦伦形成了鲜明的对比。低剂量的依非韦伦可以避免在使用高剂量依非韦伦治疗艾滋病时出现的神经毒性不良反应。本综述评估了依非韦伦的药物特性,包括调节记忆缺失的临床前数据、药代动力学、药效学、代谢物、药物代谢的遗传变异以及潜在的不良反应。这些分析讨论了未来研究中应解决的挑战和问题,以考虑低剂量依非韦伦作为AD药物开发候选药物的机会。
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引用次数: 0
A Novel Liver Cancer-Selective Histone Deacetylase Inhibitor Is Effective against Hepatocellular Carcinoma and Induces Durable Responses with Immunotherapy 一种新型肝癌选择性组蛋白去乙酰化酶抑制剂对肝细胞癌有效,并能诱导免疫疗法产生持久反应
Pub Date : 2024-09-05 DOI: 10.1021/acsptsci.4c00358
Bocheng Wu, Subhasish Tapadar, Zhiping Ruan, Carrie Q. Sun, Rebecca S. Arnold, Alexis Johnston, Jeremiah O. Olugbami, Uche Arunsi, David A. Gaul, John A. Petros, Tatsuya Kobayashi, Dan G. Duda, Adegboyega K. Oyelere
Hepatocellular carcinoma (HCC) progression is facilitated by gene-silencing chromatin histone hypoacetylation due to histone deacetylase (HDAC) activation. However, inhibiting HDACs─an effective treatment for lymphomas─has shown limited success in solid tumors. We report the discovery of a class of HDAC inhibitors (HDACi) that demonstrates exquisite selective cytotoxicity against human HCC cells. The lead compound STR-V-53 (3) showed a favorable safety profile in mice and robustly suppressed tumor growth in orthotopic xenograft models of HCC. When combined with the anti-HCC drug sorafenib, STR-V-53, showed greater in vivo efficacy. Moreover, STR-V-53 combined with anti-PD1 therapy increased the CD8+ to regulatory T-cell (Treg) ratio and survival in an orthotopic HCC model in immunocompetent mice. This combination therapy resulted in durable responses in 40% of the mice. Transcriptomic analysis revealed that STR-V-53 primed HCC cells to immunotherapy through HDAC inhibition, impaired glucose-regulated transcription, impaired DNA synthesis, upregulated apoptosis, and stimulated the immune response pathway. Collectively, our data demonstrate that the novel HDACi STR-V-53 is an effective anti-HCC agent that can induce profound responses when combined with standard immunotherapy.
组蛋白去乙酰化酶(HDAC)激活导致的基因沉默染色质组蛋白低乙酰化促进了肝细胞癌(HCC)的进展。然而,抑制 HDAC(一种治疗淋巴瘤的有效方法)在实体瘤中的疗效有限。我们报告了一类 HDAC 抑制剂(HDACi)的发现,它对人类 HCC 细胞具有极强的选择性细胞毒性。先导化合物 STR-V-53 (3) 在小鼠体内表现出良好的安全性,并在 HCC 的正位异种移植模型中强力抑制肿瘤生长。当与抗 HCC 药物索拉非尼联用时,STR-V-53 显示出更强的体内疗效。此外,STR-V-53与抗PD1疗法联合使用,可提高CD8+与调节性T细胞(Treg)的比例,并提高免疫功能正常小鼠的HCC模型存活率。这种联合疗法使 40% 的小鼠产生了持久的反应。转录组分析表明,STR-V-53 通过抑制 HDAC、损害葡萄糖调控的转录、损害 DNA 合成、上调细胞凋亡以及刺激免疫反应途径,使 HCC 细胞对免疫疗法产生免疫反应。总之,我们的数据表明,新型 HDACi STR-V-53 是一种有效的抗 HCC 药物,与标准免疫疗法相结合可诱导深远的反应。
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引用次数: 0
PEGylation-Dependent Cell Uptake of Lipid Nanoparticles Revealed by Spatiotemporal Correlation Spectroscopy 时空相关光谱学揭示 PEG 化依赖细胞对脂质纳米颗粒的吸收
Pub Date : 2024-09-05 DOI: 10.1021/acsptsci.4c00419
Luca Digiacomo, Serena Renzi, Andrea Pirrottina, Heinz Amenitsch, Valentina De Lorenzi, Daniela Pozzi, Francesco Cardarelli, Giulio Caracciolo
Polyethylene glycol (PEG) is a common surface modification for lipid nanoparticles (LNPs) to improve their stability and in vivo circulation time. However, the impact of PEGylation on LNP cellular uptake remains poorly understood. To tackle this issue, we systematically compared plain and PEGylated LNPs by combining dynamic light scattering, electrophoretic light scattering, and synchrotron small-angle X-ray scattering (SAXS) that unveils a striking similarity in size and core structure but a significant reduction in surface charge. Upon administration to human embryonic kidney (HEK 293) cells, plain and PEGylated LNPs were internalized through different endocytic routes, as revealed by spatiotemporal correlation spectroscopy. An imaging-derived mean square displacement (iMSD) analysis shows that PEGylated LNPs exhibit a significantly stronger preference for caveolae-mediated endocytosis (CAV) and clathrin-mediated endocytosis (CME) pathways compared to plain LNPs, with these latter being better tailored to MCR-dependent internalization and trafficking. This suggests that PEG plays a crucial role in directing LNPs toward specific cellular uptake routes. Further studies should explore how PEG-mediated endocytosis impacts intracellular trafficking and ultimately translates to therapeutic efficacy, guiding the design of next-generation LNP delivery systems.
聚乙二醇(PEG)是一种常见的脂质纳米颗粒(LNPs)表面改性剂,可提高其稳定性和体内循环时间。然而,人们对 PEG 化对 LNP 细胞摄取的影响仍知之甚少。为了解决这个问题,我们结合动态光散射、电泳光散射和同步辐射小角 X 射线散射 (SAXS),系统地比较了普通 LNPs 和 PEG 化 LNPs。通过时空相关光谱法发现,在人胚胎肾脏(HEK 293)细胞中给药后,纯LNPs和PEG化LNPs通过不同的内细胞途径被内化。成像衍生均方位移(iMSD)分析表明,与普通 LNPs 相比,PEG 化 LNPs 对洞穴介导的内吞(CAV)和凝胶酶介导的内吞(CME)途径的偏好明显更强,后者更适合 MCR 依赖性内化和贩运。这表明,PEG 在引导 LNPs 进入特定的细胞摄取途径方面起着至关重要的作用。进一步的研究应探讨 PEG 介导的内吞作用如何影响细胞内的转运并最终转化为疗效,从而为下一代 LNP 递送系统的设计提供指导。
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引用次数: 0
The Ubiquitin Tale: Current Strategies and Future Challenges 泛素的故事:当前战略与未来挑战
Pub Date : 2024-09-04 DOI: 10.1021/acsptsci.4c00278
Arun Upadhyay, Vibhuti Joshi
Ubiquitin (Ub) is often considered a structurally conserved protein. Ubiquitination plays a prominent role in the regulation of physiological pathways. Since the first mention of Ub in protein degradation pathways, a plethora of nonproteolytic functions of this post-translational modification have been identified and investigated in detail. In addition, several other structurally and functionally related proteins have been identified and investigated for their Ub-like structures and functions. Ubiquitination and Ub-like modifications play vital roles in modulating the pathways involved in crucial biological processes and thus affect the global proteome. In this Review, we provide a snapshot of pathways, substrates, diseases, and novel therapeutic targets that are associated with ubiquitination or Ub-like modifications. In the past few years, a large number of proteomic studies have identified pools of ubiquitinated proteins (ubiquitylomes) involved or induced in healthy or stressed conditions. These comprehensive studies involving identification of new ubiquitination substrates and sites contribute enormously to our understanding of ubiquitination in more depth. However, with the current tools, there are certain limitations that need to be addressed. We review recent technological advancements in ubiquitylomic studies and their limitations and challenges. Overall, large-scale ubiquitylomic studies contribute toward understanding global ubiquitination in the contexts of normal and disease conditions.
泛素(Ub)通常被认为是一种结构保守的蛋白质。泛素化在生理途径的调控中发挥着重要作用。自从首次提到 Ub 在蛋白质降解途径中的作用以来,人们已经发现并详细研究了这种翻译后修饰的大量非蛋白水解功能。此外,还发现了其他几种结构和功能相关的蛋白质,并对其类似 Ub 的结构和功能进行了研究。泛素化和类 Ub 修饰在调节参与关键生物过程的途径方面发挥着重要作用,从而影响着全球蛋白质组。在本综述中,我们将简要介绍与泛素化或 Ub 类修饰相关的途径、底物、疾病和新型治疗靶点。在过去几年中,大量蛋白质组学研究发现了在健康或受压条件下参与或诱导泛素化的蛋白质池(泛素簇)。这些涉及鉴定新泛素化底物和位点的综合研究极大地促进了我们对泛素化的深入了解。然而,目前的工具还存在一定的局限性,需要加以解决。我们回顾了泛素组学研究的最新技术进展及其局限性和挑战。总体而言,大规模泛素组学研究有助于了解正常和疾病情况下的全局泛素化。
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引用次数: 0
Analysis of Biogenic Amines and Small Molecule Metabolites in Human Diabetic Wound Ulcer Exudate 人体糖尿病伤口溃疡渗出物中的生物胺和小分子代谢物分析
Pub Date : 2024-09-04 DOI: 10.1021/acsptsci.4c00418
Lisa Gould, Morteza Mahmoudi
Diabetic foot ulcers (DFUs) pose a significant challenge in wound care due to their chronic nature and impaired healing processes. This study examines the biogenic amines and small molecule metabolites present in DFU wound exudates to identify their potential roles in wound healing. Under an IRB-approved protocol, wound fluid samples were collected from 25 diabetic patients and analyzed using ultrahigh-pressure liquid chromatography coupled with electrospray ionization quadrupole time-of-flight tandem mass spectrometry. The analysis identified 721 metabolites, with 402 confirmed through stringent criteria. Key metabolites significantly contributing to the wound exudates include betaine, lactic acid, carnitine, choline, creatine, and metformin (a widely used first-line treatment for type 2 diabetes). These molecules are known to influence wound healing processes, such as collagen synthesis, angiogenesis, inflammation modulation, and energy metabolism. Notably, the presence of drugs such as metformin and beclomethasone in the exudates suggests significant pharmacodynamic interactions that could influence wound healing. Specifically, we discovered that the combined use of insulin and metformin administered systemically significantly increased the concentration of metformin in the wound exudates (from 0.3% ± 0.0 to 3.1% ± 3.4; p = 0.00 49). This study highlights the complexity of DFU exudate composition and underscores the potential for targeted metabolic profiling to develop personalized wound care strategies.
糖尿病足溃疡(DFU)由于其慢性性质和愈合过程受损,给伤口护理带来了巨大挑战。本研究对 DFU 伤口渗出物中的生物胺和小分子代谢物进行了研究,以确定它们在伤口愈合中的潜在作用。根据 IRB 批准的方案,研究人员收集了 25 名糖尿病患者的伤口渗出液样本,并使用超高压液相色谱法和电喷雾四极杆飞行时间串联质谱法进行了分析。分析确定了 721 种代谢物,其中 402 种经过严格标准确认。对伤口渗出物有重大影响的主要代谢物包括甜菜碱、乳酸、肉碱、胆碱、肌酸和二甲双胍(一种广泛用于治疗 2 型糖尿病的一线药物)。众所周知,这些分子会影响伤口愈合过程,如胶原蛋白合成、血管生成、炎症调节和能量代谢。值得注意的是,渗出液中含有二甲双胍和倍氯米松等药物,这表明药效学相互作用可能会影响伤口愈合。具体来说,我们发现联合使用胰岛素和二甲双胍系统给药会显著增加伤口渗出液中二甲双胍的浓度(从 0.3% ± 0.0 到 3.1% ± 3.4; p = 0.00 49)。这项研究凸显了DFU渗出液成分的复杂性,并强调了有针对性的代谢分析在制定个性化伤口护理策略方面的潜力。
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引用次数: 0
Beauvericin Reverses Epithelial-to-Mesenchymal Transition in Triple-Negative Breast Cancer Cells through Regulation of Notch Signaling and Autophagy 蒲公英通过调控Notch信号和自噬逆转三阴性乳腺癌细胞的上皮-间质转化
Pub Date : 2024-09-03 DOI: 10.1021/acsptsci.4c00370
Arupam Patra, Arisha Arora, Siddhartha Sankar Ghosh, Gurvinder Kaur Saini
Metastasis stands as a prime contributor to triple-negative breast cancer (TNBC) associated mortality worldwide, presenting heightened severity and significant challenges due to limited treatment options. Addressing TNBC metastasis necessitates innovative approaches and novel therapeutics to specifically target its propensity for dissemination to distant organs. Targeted therapies capable of reversing epithelial-to-mesenchymal transition (EMT) play a crucial role in suppressing metastasis and enhancing the treatment response. Beauvericin, a promising fungal secondary metabolite, exhibits significant potential in diminishing the viability of EMT-induced TNBC cells by triggering intracellular oxidative stress, as evidenced by an enhanced reactive oxygen species level and reduced mitochondrial transmembrane potential. In monolayer cultures, it has exhibited an IC50 of 2.3 μM in both MDA-MB-468 and MDA-MB-231 cells, while in 3D spheroids, the IC50 values are 9.7 and 7.1 μM, respectively. Beauvericin has also reduced the migratory capability of MDA-MB-468 and MDA-MB-231 cells by 1.5- and 1.7-fold, respectively. Both qRT-PCR and Western blot analysis have shown significant upregulation in the expression of epithelial marker (E-cadherin) and downregulation in the expression of mesenchymal markers (N-cadherin, vimentin, Snail, Slug, and β-catenin), following treatment, indicating reversal of EMT. Furthermore, beauvericin has suppressed the Notch signaling pathway by substantially downregulating Notch-1, Notch-3, Hes-1, and cyclinD3 expression and induced autophagy as observed by elevated expression of autophagy markers LC3 and Beclin-1. In conclusion, beauvericin has successfully downregulated TNBC cell survival by inducing oxidative stress and suppressed their migratory potential by reversing EMT through the inhibition of Notch signaling and activation of autophagy.
在全球范围内,转移是导致三阴性乳腺癌(TNBC)相关死亡率的主要因素,由于治疗方案有限,转移的严重性和挑战性也随之增加。解决 TNBC 转移问题需要创新方法和新型疗法,以专门针对其向远处器官扩散的倾向。能够逆转上皮细胞向间质转化(EMT)的靶向疗法在抑制转移和增强治疗反应方面发挥着至关重要的作用。Beauvericin 是一种很有前景的真菌次生代谢产物,它通过引发细胞内氧化应激,在降低 EMT 诱导的 TNBC 细胞的活力方面表现出巨大的潜力,活性氧水平的提高和线粒体跨膜电位的降低就是证明。在单层培养中,它对 MDA-MB-468 和 MDA-MB-231 细胞的 IC50 值均为 2.3 μM,而在三维球状培养中,IC50 值分别为 9.7 和 7.1 μM。蒲公英还能使 MDA-MB-468 和 MDA-MB-231 细胞的迁移能力分别降低 1.5 倍和 1.7 倍。qRT-PCR和Western印迹分析表明,处理后上皮标志物(E-cadherin)的表达明显上调,而间充质标志物(N-cadherin、vimentin、Snail、Slug和β-catenin)的表达则明显下调,这表明EMT发生了逆转。此外,蒲公英苷还通过大幅下调Notch-1、Notch-3、Hes-1和cyclinD3的表达来抑制Notch信号通路,并通过提高自噬标记物LC3和Beclin-1的表达来诱导自噬。总之,蒲公英苷通过诱导氧化应激成功地降低了TNBC细胞的存活率,并通过抑制Notch信号传导和激活自噬逆转了EMT,从而抑制了TNBC细胞的迁移潜力。
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ACS Pharmacology & Translational Science
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