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Impact of diffusion mechanisms on persistence and spreading. 扩散机制对持续和扩散的影响。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-22 DOI: 10.1007/s00285-025-02301-1
Nathanaël Boutillon, Yong-Jung Kim, Lionel Roques

We examine a generalized KPP equation with a "q-diffusion", which is a framework that unifies various standard linear diffusion regimes: Fickian diffusion ( q = 0 ), Stratonovich diffusion ( q = 1 / 2 ), Fokker-Planck diffusion ( q = 1 ), and nonstandard diffusion regimes for general q R . Using both analytical methods and numerical simulations, we explore how the ability of persistence (measured by some principal eigenvalue) and how the asymptotic spreading speed depend on the parameter q and on the phase shift between the growth rate r(x) and the diffusion coefficient D(x). Our results demonstrate that persistence and spreading properties generally depend on q: for example, appropriate configurations of r(x) and D(x) can be constructed such that q-diffusion either enhances or diminishes the ability of persistence and the spreading speed with respect to the traditional Fickian diffusion. We show that the spatial arrangement of r(x) with respect to D(x) has markedly different effects depending on whether q > 0 , q = 0 , or q < 0 . The case where r is constant is an exception: persistence becomes independent of q, while the spreading speed displays a symmetry around q = 1 / 2 . This work underscores the importance of carefully selecting diffusion models in ecological and epidemiological contexts, highlighting their potential implications for persistence, spreading, and control strategies.

我们研究了一个具有“q-扩散”的广义KPP方程,它是一个统一各种标准线性扩散机制的框架:Fickian扩散(q = 0), Stratonovich扩散(q = 1 / 2), Fokker-Planck扩散(q = 1),以及一般q∈R的非标准扩散机制。利用解析方法和数值模拟,我们探讨了持续能力(由某些主特征值测量)和渐近扩散速度如何依赖于参数q和增长率r(x)与扩散系数D(x)之间的相移。我们的结果表明,持续和扩散特性通常取决于q:例如,可以构造适当的r(x)和D(x)的配置,使得q扩散相对于传统的菲克扩散增强或减弱持续能力和传播速度。我们证明了r(x)相对于D(x)的空间排列有明显不同的影响,这取决于q > 0, q = 0,还是q 0。r为常数的情况是个例外:持久性与q无关,而传播速度在q = 1 / 2附近呈现对称性。这项工作强调了在生态和流行病学背景下仔细选择扩散模型的重要性,强调了它们对持久性、传播和控制策略的潜在影响。
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引用次数: 0
The work of Pierre Magal on differential equations, functional analysis and mathematical biology. 皮埃尔·马加尔在微分方程、泛函分析和数学生物学方面的工作。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-18 DOI: 10.1007/s00285-025-02273-2
Jacques Demongeot, Thomas Hillen, Shigui Ruan, Glenn Webb

Pierre Magal (1967-2024) was a leading researcher at the interface of differential equations, functional analysis, and mathematical biology. He made substantial contributions to both theoretical and applied aspects of these subjects. He published a dozen monographs, proceedings, and special issues and more than 125 journal articles. In this article we provide an introduction to Pierre's contributions in some topics, including discrete population dynamics, integrated semigroup theory and abstract Cauchy problems with nondense domain, traveling waves in biological systems, uniform persistence and global attractors, cell-to-cell P-glycoprotein transfer in breast cancers, transfer problems in population dynamics and economics, and modeling of various epidemic problems, in particular his recent and extensive work on modeling COVID-19.

皮埃尔·马加尔(Pierre Magal, 1967-2024)是微分方程、泛函分析和数学生物学领域的主要研究者。他在这些学科的理论和应用方面都做出了重大贡献。他出版了十几部专著、论文集、特刊和125多篇期刊文章。在这篇文章中,我们将介绍皮埃尔在一些领域的贡献,包括离散种群动力学、集成半群理论和非密集域的抽象柯西问题、生物系统中的行波、均匀持久性和全局吸引子、乳腺癌中的细胞间p -糖蛋白转移、种群动力学和经济学中的转移问题,以及各种流行病问题的建模。特别是他最近在COVID-19建模方面的广泛工作。
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引用次数: 0
Go-or-grow models in biology: a monster on a leash. 生物学中的“去或成长”模型:拴着皮带的怪物。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-16 DOI: 10.1007/s00285-025-02243-8
Ryan Thiessen, Martina Conte, Tracy L Stepien, Thomas Hillen

Go-or-grow approaches represent a specific class of mathematical models used to describe populations where individuals either migrate or reproduce, but not both simultaneously. These models have a wide range of applications in biology and medicine, chiefly among those the modeling of brain cancer spread. The analysis of go-or-grow models has inspired new mathematics, and it is the purpose of this review to highlight interesting and challenging mathematical properties of reaction-diffusion models of the go-or-grow type. We provide a detailed review of biological and medical applications before focusing on key results concerning solution existence and uniqueness, pattern formation, critical domain size problems, and traveling waves. We present new results related to the critical domain size and traveling wave problems, and we connect these findings to the existing literature. Moreover, we demonstrate the high level of instability inherent in go-or-grow models. We argue that there is currently no accurate numerical solver for these models, and emphasize that special care must be taken when dealing with the "monster on a leash".

“去或成长”方法代表了一类特定的数学模型,用于描述个体要么迁移要么繁殖,但不能同时迁移和繁殖的种群。这些模型在生物学和医学中有着广泛的应用,其中主要是脑癌扩散的模型。对发展或成长模型的分析激发了新的数学,本文的目的是突出发展或成长类型的反应扩散模型的有趣和具有挑战性的数学性质。我们详细回顾了生物和医学应用,然后重点介绍了解决方案的存在性和唯一性,模式形成,关键域大小问题和行波的关键结果。我们提出了与临界域尺寸和行波问题相关的新结果,并将这些发现与现有文献联系起来。此外,我们还证明了“去或成长”模型中固有的高度不稳定性。我们认为,目前还没有准确的数值解算器用于这些模型,并强调在处理“拴在皮带上的怪物”时必须特别小心。
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引用次数: 0
Adaptive dynamics of diverging fitness optima. 发散适应度最优的自适应动力学。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-13 DOI: 10.1007/s00285-025-02270-5
Manh Hong Duong, Fabian Spill, Blaine Van Rensburg

We study the long time behaviour of a non-local parabolic integro-differential equation modelling the evolutionary dynamics of a phenotypically-structured population in a changing environment. Such models can arise in variety of contexts from climate change to chemotherapy to the ageing body. The main novelty is that there are two locally optimal traits, each of which shifts at a possibly different linear velocity. We determine sufficient conditions to guarantee extinction or persistence of the population in terms of associated eigenvalue problems. When the population does not go extinct, we study the behaviour of long time solutions in the case of rare mutations: the long time solution concentrates as a sum of Dirac masses on a point set of "lagged optima" which are strictly behind the true shifting optima as the mutation rate goes to zero. If we further assume the shift velocities are different, we show the solution concentrates specifically on the positive lagged optimum with maximum lagged fitness. Our results imply that for populations undergoing competition in temporally changing environments, both the true optimal fitness and the required rate of adaptation for each of the diverging optimal traits determine the eventual dominance of one trait.

我们研究了一个非局部抛物型积分微分方程的长时间行为,该方程模拟了表型结构种群在变化环境中的进化动力学。从气候变化到化学疗法,再到人体老化,这些模型可以在各种情况下出现。主要的新奇之处在于有两个局部最优特征,每一个都可能以不同的线性速度变化。我们根据相关的特征值问题确定了保证种群灭绝或持续存在的充分条件。当种群未灭绝时,我们研究了在罕见突变情况下的长时间解的行为:长时间解集中为“滞后最优”点集上的狄拉克质量和,当突变率趋于零时,这些点集严格落后于真正的移动最优。如果我们进一步假设移位速度是不同的,我们证明了解决方案特别集中于具有最大滞后适应度的正滞后最优。我们的研究结果表明,对于在时间变化的环境中进行竞争的种群来说,真正的最佳适应度和每个分散的最佳性状所需的适应率决定了一个性状的最终优势。
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引用次数: 0
Effects and biological consequences of the predator-mediated apparent competition II: PDE models. 捕食者介导的表观竞争的影响和生物学后果II: PDE模型。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-13 DOI: 10.1007/s00285-025-02278-x
Yuan Lou, Weirun Tao, Zhi-An Wang

In Lou et al. (Lou Y, Tao W, Wang Z-A. Effects and biological consequences of the predator-mediated apparent competition I: ODE models. J. Math. Biol. 91 (2025), 47, 37 pages), the authors investigated the effects and biological consequences of the predator-mediated apparent competition using a temporal (ODE) system consisting of one predator and two prey species (one is native and the other is invasive) with Holling type I and II functional responses. This paper is a sequel to Lou et al. (Lou Y, Tao W, Wang Z-A. Effects and biological consequences of the predator-mediated apparent competition I: ODE models. J. Math. Biol. 91 (2025), 47, 37 pages.), by including spatial movements (diffusion and prey-taxis) into the ODE system and examining the spatial effects on the population dynamics under the predator-mediated apparent competition. We establish the global boundedness of solutions in a two-dimensional bounded domain with Neumann boundary conditions and the global stability of constant steady states in certain parameter regimes, by which we find a threshold dynamics in terms of the predator's death rate. For the parameters outside the global stability regimes, we conduct a linear stability analysis to show that diffusion and/or prey-taxis can induce instability by both steady-state and Hopf bifurcations. We further use numerical simulations to illustrate that various spatial patterns are all possible, including stable spatial aggregation patterns, spatially homogeneous but time-periodic patterns, and spatially inhomogeneous and time-oscillatory patterns. It comes with a surprise that either of diffusion and prey-taxis can induce steady-state or Hopf bifurcations to generate intricate spatial patterns in the one predator-two prey system, which is sharply different from the one predator-one prey system for which neither diffusion nor prey-taxis can induce spatial patterns. These results show that spatial movements play profound roles in the emerging properties for predator-prey systems with multiple prey species. We also find that prey-taxis may play dual roles (stabilization and destabilization) and facilitate the predator-mediated apparent competition to eliminate the native prey species under the moderate initial mass of invasive prey species.

[1]刘勇,陶伟,王志安。捕食者介导的表观竞争的影响和生物学后果I: ODE模型。j .数学。作者利用一个由一个捕食者和两个猎物物种(一个是本地物种,另一个是入侵物种)组成的时间(ODE)系统,研究了具有Holling I型和II型功能反应的捕食者介导的表观竞争的影响和生物学后果。本文是Lou et al.(娄毅,陶伟,王志安。)捕食者介导的表观竞争的影响和生物学后果I: ODE模型。j .数学。生物学报,91(2025),47,37页),通过将空间运动(扩散和猎物趋向性)纳入ODE系统,并在捕食者介导的表观竞争下研究空间对种群动态的影响。在具有Neumann边界条件的二维有界域上建立了解的全局有界性,并在一定参数范围内建立了常稳态的全局稳定性,由此得到了捕食者死亡率的阈值动力学。对于全局稳定区外的参数,我们进行了线性稳定性分析,以表明扩散和/或猎物趋向性可以通过稳态和Hopf分岔诱导不稳定性。我们进一步使用数值模拟来说明各种空间模式都是可能的,包括稳定的空间聚集模式,空间均匀但时间周期模式,空间非均匀但时间振荡模式。令人惊讶的是,在一个捕食者-两个猎物系统中,扩散和猎物趋向性都可以诱导稳态或Hopf分岔,从而产生复杂的空间模式,这与一个捕食者-一个猎物系统中,扩散和猎物趋向性都不能诱导空间模式有很大的不同。这些结果表明,空间运动在具有多种猎物的捕食者-猎物系统的新特性中起着深刻的作用。研究还发现,捕食趋向性可能具有稳定和不稳定的双重作用,并在入侵猎物初始质量适中的情况下,促进了捕食者介导的表观竞争,从而消除了本地猎物。
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引用次数: 0
Dynamical modeling and data analysis of HIV infection with infection-age, CTLs immune response and delayed antibody immune response. HIV感染与感染年龄、ctl免疫反应和延迟抗体免疫反应的动态建模和数据分析。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-13 DOI: 10.1007/s00285-025-02285-y
Yong Li, Lianyun Zhang, Jinhui Zhang, Sanhong Liu, Zhihang Peng

HIV infection, a leading cause of AIDS, continues to impose a substantial global health burden. This study investigates the mechanisms of HIV infection and immune responses through a delayed infection-age structured model that integrates viral target cell infection, CTLs-mediated immunity, and delayed antibody immune responses. We rigorously analyze the existence, uniqueness, and boundedness of the model's solution semi-flow, followed by detailed examinations of equilibrium states coexistence and local stability. Using clinical HIV case data from Jiangsu Province, we estimate model parameters and assess fitting accuracy. The model successfully replicates key clinical manifestations in four ART-treated patients, underscoring its medical relevance. Our findings suggest that ART efficacy primarily manifests in reduced infection rates and viral release rates. Notably, reverse transcriptase inhibitors, fusion inhibitors, and entry inhibitors demonstrate significantly superior therapeutic efficacy compared to protease inhibitors and treatments targeting drug-resistant viral strains. Moreover, ART exhibits significantly stronger enhancement of cellular immunity (particularly CD8+ T cell responses) than modulation of humoral immunity, viral reservoirs persist despite potent antiretroviral suppression.

艾滋病毒感染是艾滋病的主要原因,继续给全球健康造成沉重负担。本研究通过整合病毒靶细胞感染、ctl介导的免疫和延迟抗体免疫应答的延迟感染-年龄结构模型来研究HIV感染和免疫应答的机制。我们严格地分析了模型解半流的存在性、唯一性和有界性,然后详细地检验了平衡态共存和局部稳定性。利用江苏省HIV临床病例数据,估计模型参数并评估拟合精度。该模型成功地复制了四名接受art治疗的患者的关键临床表现,强调了其医学相关性。我们的研究结果表明,抗逆转录病毒治疗的疗效主要表现在降低感染率和病毒释放率。值得注意的是,与蛋白酶抑制剂和针对耐药病毒株的治疗相比,逆转录酶抑制剂、融合抑制剂和进入抑制剂显示出明显更好的治疗效果。此外,抗逆转录病毒疗法对细胞免疫(尤其是CD8+ T细胞应答)的增强作用明显强于对体液免疫的调节,尽管抗逆转录病毒疗法对病毒的抑制作用很强,但病毒库仍然存在。
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引用次数: 0
Global bifurcation dynamics in an SIRS model with nonlinear incidence and double exposure. 具有非线性入射和双重曝光的SIRS模型的全局分岔动力学。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-06 DOI: 10.1007/s00285-025-02289-8
Yancong Xu, Yue Yang, Malay Banerjee, Libin Rong

Mathematical modeling is essential for understanding infectious disease dynamics and guiding public health strategies. We study the global dynamics of a susceptible-infectious-recovered-susceptible (SIRS) model with a generalized nonlinear incidence function, revealing a rich array of bifurcation phenomena, including saddle-node, cusp, forward and backward bifurcations, Bogdanov-Takens bifurcations, saddle-node bifurcation of limit cycles, subcritical and supercritical Hopf bifurcations, generalized Hopf bifurcations, homoclinic and degenerate homoclinic bifurcations, as well as isola bifurcation. Using normal form theory, we show that the Hopf bifurcation reaches codimension three, resulting in up to three small-amplitude limit cycles. The involvement of the recovered population enables coexistence of these limit cycles, leading to bistable and tristable dynamics. We employ a one-step transformation method to analyze codimension two and three Bogdanov-Takens bifurcations, confirming a maximum codimension of three. In particular, we identify isolas of limit cycles in an SIRS model involving double exposure, introducing a mechanism for generating limit cycles centered on the isola. The findings may have important public health implications, highlighting how nonlinearities in transmission and immunity can produce recurrent outbreaks or persistent infection despite interventions. The existence of multiple limit cycles suggests that small changes in transmission rates or immune response could cause abrupt shifts in outbreak patterns, emphasizing the need for adaptive and flexible intervention strategies.

数学建模对于理解传染病动态和指导公共卫生战略至关重要。本文研究了一类具有广义非线性关联函数的易感-感染-恢复-易感(SIRS)模型的全局动力学,揭示了一系列丰富的分岔现象,包括鞍节点分岔、尖端分岔、正向分岔和后向分岔、Bogdanov-Takens分岔、极限环的鞍节点分岔、亚临界和超临界Hopf分岔、广义Hopf分岔、同斜分岔和简并同斜分岔以及孤立分岔。利用范式理论,我们证明了Hopf分岔达到余维三,导致最多三个小振幅极限环。恢复种群的参与使这些极限环共存,导致双稳态和三稳态动力学。我们采用一步变换方法分析了余维2和三个波格丹诺夫- takens分岔,证实了最大余维为3。特别是,我们在涉及双重暴露的SIRS模型中确定了极限环的隔离点,并引入了以隔离点为中心产生极限环的机制。这些发现可能具有重要的公共卫生意义,强调了尽管采取了干预措施,但传播和免疫的非线性如何产生复发性暴发或持续性感染。多个极限环的存在表明,传播率或免疫反应的微小变化可能导致暴发模式的突然转变,强调需要适应性和灵活的干预战略。
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引用次数: 0
50 Years Journal of Mathematical Biology. 数学生物学50年杂志。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-06 DOI: 10.1007/s00285-025-02259-0
Thomas Hillen, Anna Marciniak-Czochra

The year 2024 marked the 50th anniversary of the Journal of Mathematical Biology. The journal was founded in 1974 with the vision to build a platform for advanced mathematical methods as they are applied and developed for biological problems. What began as a small journal for a specialized group of experts has grown into a flag-ship journal of a large and ever expanding field. We celebrate this occasion with a Special Collection of papers from our Associate Editors and our past and present Editors in Chief to showcase the state of the art and stimulate interesting new research directions in Mathematical Biology.

2024年是《数学生物学杂志》创刊50周年。该杂志创刊于1974年,其愿景是为先进的数学方法在生物学问题上的应用和发展建立一个平台。它最初是一个专门的专家小组的小型期刊,现在已经发展成为一个大的、不断扩大的领域的旗舰期刊。为了庆祝这一时刻,我们特别收集了我们的副编辑和我们过去和现在的主编的论文,以展示数学生物学的艺术状态,并激发有趣的新研究方向。
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引用次数: 0
Stabilising spatiotemporal dynamics of mussel-algae coupled map lattices model via proportional-differential control. 利用比例微分控制稳定贻贝-藻类耦合地图格模型的时空动态。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-06 DOI: 10.1007/s00285-025-02292-z
Yanhua Zhu, Xiangyi Ma, Jinliang Wang, Federico Frascoli, Tonghua Zhang

The mussel-algae (M-A) system plays a crucial role in maintaining the balance of marine aquaculture ecosystems. Mussels filter algae from the water as a food source, while algae produce oxygen through photosynthesis and contribute to nutrient cycling. Fluctuations in the density and spatial distribution of algae populations can significantly impact the growth and reproduction of mussels, and conversely, mussels can influence algae dynamics, thereby potentially altering the equilibrium of the system. This study adopts a practical perspective, simultaneously considering the effects of self-diffusion and cross-diffusion, and establishes a spatiotemporally discretised coupled map lattices (CMLs) model for the M-A system. Utilising linear stability analysis, bifurcation theory, and the centre manifold theorem, we explore the stability and classification of fixed points within the CMLs model, as well as the parameter conditions that give rise to flip and Turing bifurcations. Numerical simulations demonstrate the rich temporal dynamics and spatiotemporal patterns induced by five different mechanisms. Notably, we introduce a proportional-differential (PD) control into the CMLs model for the first time. Through numerical simulations, we validate that the PD control can delay the occurrence of the flip bifurcation, thereby preventing multi-period oscillations and chaos in algal population density, which could lead to system instability. Moreover, the PD control can reduce the Turing instability region and adjust the Turing pattern types induced by the five mechanisms, thus ensuring a uniform spatiotemporal distribution of the algal population and contributing to the stability of the ecosystem.

贻贝-藻类系统在维持海洋养殖生态系统平衡中起着至关重要的作用。贻贝从水中过滤藻类作为食物来源,而藻类通过光合作用产生氧气,有助于养分循环。藻类种群密度和空间分布的波动会显著影响贻贝的生长和繁殖,反过来,贻贝也会影响藻类的动态,从而可能改变系统的平衡。本文从实际出发,同时考虑自扩散和交叉扩散的影响,建立了M-A系统的时空离散耦合映射格(cml)模型。利用线性稳定性分析、分岔理论和中心流形定理,我们探讨了cml模型中不动点的稳定性和分类,以及引起翻转和图灵分岔的参数条件。数值模拟结果表明,五种不同的机制诱发了丰富的时间动态和时空格局。值得注意的是,我们首次在cml模型中引入了比例微分(PD)控制。通过数值模拟,我们验证了PD控制可以延迟翻转分岔的发生,从而防止可能导致系统不稳定的藻群密度的多周期振荡和混沌。PD控制可以减小图灵不稳定区,调节五种机制引起的图灵模式类型,从而保证藻类种群的时空分布均匀,有利于生态系统的稳定。
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引用次数: 0
Optimization and variability analysis of a pharmacokinetic model with dual-randomness caused by medication non-adherence. 非依从性双随机药代动力学模型的优化与变异性分析。
IF 2.3 4区 数学 Q2 BIOLOGY Pub Date : 2025-10-06 DOI: 10.1007/s00285-025-02290-1
Peiyao Wang, Xiaotian Wu, Sanyi Tang

Non-adherence to prescribed medications, typically manifested as random dosing times and variable dosages, is a significant obstacle in disease treatment. Existing model-based studies often rely on assumptions as dose omissions or random dosing times, which fails to represent the multifaceted nature of non-adherence. In this study, we propose a one-compartment stochastic pharmacokinetic model incorporating dual-randomness in dosing times and dosages. Our objective is to analyze how dual-randomness affects drug concentration variability, and to develop dosage adjustment strategies for the desired concentration. Leveraging the renewal process, the law of total expectation, and the theory of second-type Volterra integral equations, the statistical properties of drug concentrations under general distributions in dosing times and dosages are derived, including characteristic function, expectation, variance, and so on. Given specific uniform and exponential distributions of inter-dose time intervals, the explicit expressions of statistical characteristics are obtained, and the dosage adjustment strategies to acquire the desired concentration are theoretically proposed. Our findings establish a theoretical foundation for understanding drug concentration variability within a dual-randomness framework, thereby providing critical insights for risk prevention and process control in drug therapy during disease treatment.

不遵守处方药物,通常表现为随机给药时间和可变剂量,是疾病治疗的一个重大障碍。现有的基于模型的研究往往依赖于假设,如剂量遗漏或随机给药时间,这不能代表不依从性的多面性。在这项研究中,我们提出了一个单室随机药代动力学模型,该模型结合了给药时间和剂量的双重随机性。我们的目标是分析双随机性如何影响药物浓度变异性,并制定所需浓度的剂量调整策略。利用更新过程、总期望定律和第二类Volterra积分方程理论,推导了药物浓度在给药时间和剂量的一般分布下的统计性质,包括特征函数、期望、方差等。在给定剂量间时间间隔的均匀分布和指数分布的情况下,得到了统计特性的显式表达式,并从理论上提出了获得所需浓度的剂量调整策略。我们的研究结果为理解双随机框架下的药物浓度变异性奠定了理论基础,从而为疾病治疗期间药物治疗的风险预防和过程控制提供了重要见解。
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引用次数: 0
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Journal of Mathematical Biology
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