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Persistence and neutrality in interacting replicator dynamics. 相互作用复制因子动力学中的持久性和中立性。
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2025-01-03 DOI: 10.1007/s00285-024-02174-w
Leonardo Videla, Mauricio Tejo, Cristóbal Quiñinao, Pablo A Marquet, Rolando Rebolledo

We study the large-time behavior of an ensemble of entities obeying replicator-like stochastic dynamics with mean-field interactions as a model for a primordial ecology. We prove the propagation-of-chaos property and establish conditions for the strong persistence of the N-replicator system and the existence of invariant distributions for a class of associated McKean-Vlasov dynamics. In particular, our results show that, unlike typical models of neutral ecology, fitness equivalence does not need to be assumed but emerges as a condition for the persistence of the system. Further, neutrality is associated with a unique Dirichlet invariant probability measure. We illustrate our findings with some simple case studies, provide numerical results, and discuss our conclusions in the light of Neutral Theory in ecology.

我们研究了具有平均场相互作用的服从复制器类随机动力学的实体集合的大时间行为,作为原始生态的模型。我们证明了一类相关McKean-Vlasov动力学的混沌传播性质,并建立了n复制子系统的强持久性和不变量分布的存在性条件。特别是,我们的结果表明,与典型的中性生态模型不同,适应度等效不需要假设,而是作为系统持续存在的条件。此外,中立性与唯一的狄利克雷不变概率测度相关联。我们用一些简单的案例研究来说明我们的发现,提供数值结果,并根据生态学中的中性理论讨论我们的结论。
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引用次数: 0
Increase maximum economic yield in a patchy environment. 在不均匀的环境中提高最大经济产量。
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-29 DOI: 10.1007/s00285-024-02178-6
Bilel Elbetch, Ali Moussaoui, Pierre Auger

In this work, we study the model of a fish species growing logistically exploited by a fishing fleet in a heterogeneous environment. The environment is made up of a network of fishing patches connected by fish migrations taking place on a fast time scale. We are interested in the maximum economic yield (MEY) which corresponds to the maximum profit made by the fishing fleet. We show that the total MEY profit of the fishery made up of all the connected fishing patches can be greater than the sum of the MEY profits of isolated patches in the absence of migration. We study the general case with any number of connected patches then focus on the case of a system composed of two patches. In the latter case, we show that asymmetry in fish migration plays an important role in increasing the total profit at the MEY by connecting patches. We illustrate our results with numerical simulations allowing us to compare the MEY fishery system with connected patches compared to the system with isolated patches.

在这项工作中,我们研究了在异质环境中由渔船队进行物流开发的鱼类生长模型。环境是由一个渔网组成的,这些渔网由快速洄游的鱼类连接在一起。我们感兴趣的是最大经济产量(MEY),它与捕鱼船队的最大利润相对应。我们发现,在没有迁徙的情况下,由所有连通的渔场组成的渔场的总经济效益可以大于孤立渔场的经济效益之和。我们研究了任意数量的连接补丁的一般情况,然后重点研究了由两个补丁组成的系统的情况。在后一种情况下,我们发现通过连接斑块,鱼类洄游的不对称性对增加最大经济产量的总利润起着重要作用。我们用数值模拟来说明我们的结果,使我们能够将具有连通斑块的MEY渔业系统与具有孤立斑块的系统进行比较。
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引用次数: 0
A spatial multiscale mathematical model of Plasmodium vivax transmission. 间日疟原虫传播的空间多尺度数学模型。
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-24 DOI: 10.1007/s00285-024-02166-w
Shoshana Elgart, Mark B Flegg, Somya Mehra, Jennifer A Flegg

The epidemiological behavior of Plasmodium vivax malaria occurs across spatial scales including within-host, population, and metapopulation levels. On the within-host scale, P. vivax sporozoites inoculated in a host may form latent hypnozoites, the activation of which drives secondary infections and accounts for a large proportion of P. vivax illness; on the metapopulation level, the coupled human-vector dynamics characteristic of the population level are further complicated by the migration of human populations across patches with different malaria forces of (re-)infection. To explore the interplay of all three scales in a single two-patch model of Plasmodium vivax dynamics, we construct and study a system of eight integro-differential equations with periodic forcing (arising from the single-frequency sinusoidal movement of a human sub-population). Under the numerically-informed ansatz that the limiting solutions to the system are closely bounded by sinusoidal ones for certain regions of parameter space, we derive a single nonlinear equation from which all approximate limiting solutions may be drawn, and devise necessary and sufficient conditions for the equation to have only a disease-free solution. Our results illustrate the impact of movement on P. vivax transmission and suggest a need to focus vector control efforts on forest mosquito populations. The three-scale model introduced here provides a more comprehensive framework for studying the clinical, behavioral, and geographical factors underlying P. vivax malaria endemicity.

间日疟的流行病学行为跨越空间尺度,包括宿主内、种群和超种群水平。在宿主内,间日疟原虫孢子子在宿主内接种可形成潜伏的催眠子,其激活可驱动继发感染,占间日疟原虫疾病的很大比例;在元种群水平上,种群在具有不同疟疾(再)感染力的斑块间的迁移使种群水平的人病媒耦合动力学特征进一步复杂化。为了在间日疟原虫动力学的单一双斑块模型中探索所有三个尺度的相互作用,我们构建并研究了具有周期强迫(由人类亚种群的单频正弦运动引起)的八个积分微分方程系统。在参数空间的某些区域,系统的极限解与正弦解紧密有界的数值条件下,我们导出了一个单一的非线性方程,该方程可以得到所有的近似极限解,并给出了方程只有无病解的充分必要条件。我们的研究结果说明了运动对间日疟原虫传播的影响,并建议将媒介控制工作重点放在森林蚊子种群上。本文介绍的三尺度模型为研究间日疟原虫疟疾流行的临床、行为和地理因素提供了一个更全面的框架。
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引用次数: 0
Age-structured modeling of COVID-19 dynamics: the role of treatment and vaccination in controlling the pandemic. COVID-19动态的年龄结构建模:治疗和疫苗接种在控制大流行中的作用
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-24 DOI: 10.1007/s00285-024-02168-8
Shuanglin Jing, Ling Xue, Xuezhi Li, Fanqin Zeng, Junyuan Yang

In addition to non-pharmaceutical interventions, antiviral drugs and vaccination are considered as the optimal solutions to control and eliminate the COVID-19 pandemic. It is necessary to couple within-host and between-host models to investigate the impact of treatment and vaccination. Hence, we propose an age-structured model, where the infection age is used to link the within-host viral dynamics and the disease dynamics at the population level. We conduct a detailed analysis of the local and global dynamics of the model, and the threshold dynamics are completely determined by the basic reproduction number R 0 . Thus, the disease-free equilibrium is globally asymptotically stable and the disease eventually dies out when R 0 < 1 ; the disease-free equilibrium is globally attractive when R 0 = 1 ; the disease is uniformly persistent, and the unique endemic equilibrium is globally asymptotically stable when R 0 > 1 . The numerical simulation quantitatively studies the impact of the within-host viral dynamics on between-host transmission dynamics. The results show that the combination of antiviral drugs and vaccines can play a key role in mitigating the spread of COVID-19, but it is challenging to eliminate COVID-19 alone. To achieve the complete elimination of COVID-19, we need highly effective antiviral drugs and near-universal vaccine coverage.

除非药物干预措施外,抗病毒药物和疫苗接种被认为是控制和消除COVID-19大流行的最佳解决方案。有必要结合宿主内和宿主间模型来调查治疗和疫苗接种的影响。因此,我们提出了一个年龄结构模型,其中感染年龄用于连接宿主内病毒动力学和种群水平的疾病动力学。我们对模型的局部和全局动力学进行了详细的分析,阈值动力学完全由基本再现数r0决定。因此,无病平衡点是全局渐近稳定的,当R为0时,疾病最终消失;当r0 = 1时,无病平衡具有全局吸引力;该病具有均匀持续性,且当r0 - 0时唯一的地方性平衡全局渐近稳定。数值模拟定量研究了宿主内病毒动力学对宿主间传播动力学的影响。研究结果表明,抗病毒药物和疫苗联合使用可以在缓解COVID-19的传播方面发挥关键作用,但单独消灭COVID-19具有挑战性。为了完全消除COVID-19,我们需要高效抗病毒药物和几乎普遍的疫苗覆盖。
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引用次数: 0
Duration of transients in outbreaks: when can infectiousness be estimated? 疫情的短暂持续时间:何时可以估计传染性?
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-20 DOI: 10.1007/s00285-024-02175-9
Adam Mielke, Lasse Engbo Christiansen

We investigate sub-leading orders of the classic SEIR-model using contact matrices from modeling of the Omicron and Delta variants of COVID-19 in Denmark. The goal of this is to illustrate when the growth rate, and by extension the infection transmission potential (basic or initial reproduction number), can be estimated in a new outbreak, e.g. after introduction of a new variant of a virus. In particular, we look at the time scale on which this happens in a realistic outbreak to guide future data collection. We find that as long as susceptible depletion is a minor effect, the transients are gone within around 3 weeks corresponding to about 4-5 times the incubation time. We also argue that this result generalizes to other airborne diseases in a fully mixed population.

我们利用来自丹麦新冠病毒欧米克隆和德尔塔变体模型的接触矩阵,研究了经典seir模型的次导阶。这样做的目的是说明在一次新的暴发中,例如在引入一种新的病毒变体之后,何时可以估计生长速度,进而可以估计感染传播潜力(基本或初始繁殖数)。特别是,我们研究了这种情况在实际爆发中发生的时间尺度,以指导未来的数据收集。我们发现,只要易感耗竭的影响很小,瞬态就会在大约3周内消失,相当于大约4-5倍的潜伏期。我们还认为,这一结果可以推广到完全混合人群中的其他空气传播疾病。
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引用次数: 0
Optimal vaccination policy to prevent endemicity: a stochastic model. 预防地方病的最佳疫苗接种政策:一个随机模型。
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-19 DOI: 10.1007/s00285-024-02171-z
Félix Foutel-Rodier, Arthur Charpentier, Hélène Guérin

We examine here the effects of recurrent vaccination and waning immunity on the establishment of an endemic equilibrium in a population. An individual-based model that incorporates memory effects for transmission rate during infection and subsequent immunity is introduced, considering stochasticity at the individual level. By letting the population size going to infinity, we derive a set of equations describing the large scale behavior of the epidemic. The analysis of the model's equilibria reveals a criterion for the existence of an endemic equilibrium, which depends on the rate of immunity loss and the distribution of time between booster doses. The outcome of a vaccination policy in this context is influenced by the efficiency of the vaccine in blocking transmissions and the distribution pattern of booster doses within the population. Strategies with evenly spaced booster shots at the individual level prove to be more effective in preventing disease spread compared to irregularly spaced boosters, as longer intervals without vaccination increase susceptibility and facilitate more efficient disease transmission. We provide an expression for the critical fraction of the population required to adhere to the vaccination policy in order to eradicate the disease, that resembles a well-known threshold for preventing an outbreak with an imperfect vaccine. We also investigate the consequences of unequal vaccine access in a population and prove that, under reasonable assumptions, fair vaccine allocation is the optimal strategy to prevent endemicity.

我们在这里检查反复接种疫苗和免疫力减弱对人群中建立地方病平衡的影响。考虑到个体水平的随机性,引入了一个基于个体的模型,该模型结合了感染期间传播率和随后免疫的记忆效应。通过让人口规模趋于无穷大,我们推导出一组描述流行病大规模行为的方程。对模型平衡的分析揭示了地方性平衡存在的一个标准,该标准取决于免疫丧失的速率和两次加强剂量之间的时间分布。在这种情况下,疫苗接种政策的结果受疫苗阻断传播的效率和人群中加强剂量的分布模式的影响。事实证明,与间隔不规则的加强疫苗相比,在个人层面采用间隔均匀的加强疫苗的策略在预防疾病传播方面更为有效,因为不接种疫苗的间隔较长会增加易感性,并促进更有效的疾病传播。我们提供了一个表达式,表示遵守疫苗接种政策以根除该疾病所需的人口的临界比例,这类似于用不完善的疫苗预防疾病爆发的众所周知的阈值。我们还调查了人群中疫苗获取不平等的后果,并证明,在合理的假设下,公平的疫苗分配是预防地方病的最佳策略。
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引用次数: 0
Model-based conceptualization of thyroid hormone equilibrium via set point and stability behavior. 基于模型的甲状腺激素平衡的设定点和稳定性行为概念化。
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-18 DOI: 10.1007/s00285-024-02176-8
Corinna Modiz, Andreas Körner

The HPT complex, consisting of the hypothalamus, pituitary and thyroid, functions as a regulated system controlled by the respective hormones. This system maintains an intrinsic equilibrium, called the set point, which is unique to each individual. In order to optimize the treatment of thyroid patients and understand the dynamics of the system, a validated theoretical representation of this set point is required. Therefore, the research field of mathematical modeling of the HPT complex is significant as it provides insights into the interactions between hormones and the determination of this endogenous equilibrium. In literature, two mathematical approaches are presented for the theoretical determination of the set point in addition to a time-dependent model. The two approaches are based on the maximum curvature of the pituitary response function and the optimal gain factor in the representation of the HPT complex as a closed feedback system. This paper demonstrates that all hormone curves described by the model converge to the derived set point with increasing time. This result establishes a clear correlation between the physiological equilibrium described by the set point and the mathematical equilibrium with respect to autonomous systems of differential equations. It thus substantiates the validity of the theoretical set point approaches.

HPT复合体由下丘脑、垂体和甲状腺组成,作为一个受各自激素控制的调节系统发挥作用。这个系统保持一个内在的平衡,称为设定点,这对每个个体来说都是独一无二的。为了优化甲状腺患者的治疗和了解系统的动力学,需要这个设定点的一个经过验证的理论表示。因此,HPT复合物的数学建模研究领域具有重要意义,因为它为激素之间的相互作用和这种内源性平衡的确定提供了见解。在文献中,除了时间依赖模型外,还提出了两种数学方法来确定设定点的理论。这两种方法基于垂体响应函数的最大曲率和HPT复合体作为封闭反馈系统的最佳增益因子的表示。证明了该模型所描述的所有激素曲线都随着时间的增加收敛于所导出的设定点。这一结果在由设定点所描述的生理平衡和关于微分方程自治系统的数学平衡之间建立了明确的相关性。因此,它证实了理论设定点方法的有效性。
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引用次数: 0
An integral renewal equation approach to behavioural epidemic models with information index. 带信息指数的行为流行病模型的积分更新方程方法。
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-17 DOI: 10.1007/s00285-024-02172-y
Bruno Buonomo, Eleonora Messina, Claudia Panico, Antonia Vecchio

We propose an integral model describing an epidemic of an infectious disease. The model is behavioural in the sense that the force of infection includes the information index that describes the opinion-driven human behavioural changes. The information index contains a memory kernel to mimic how the individuals maintain memory of the past values of the infection. We obtain sufficient conditions for the endemic equilibrium to be locally stable. In particular, we show that when the infectivity function is represented by an exponential distribution, stability is guaranteed by the weak Erlang memory kernel. However, through numerical simulations, we show that oscillations, possibly self-sustained, may arise when the memory is more focused in the disease's past history, as exemplified by the strong Erlang kernel. We also show the model solutions in cases of different infectivity functions taken from studies where specific diseases like Influenza and SARS are considered.

我们提出了一个描述传染病流行的整体模型。该模型是行为模型,即感染力包括信息指数,信息指数描述了由舆论驱动的人类行为变化。信息指数包含一个记忆内核,用于模拟个体如何保持对过去感染值的记忆。我们获得了地方性均衡局部稳定的充分条件。我们特别指出,当感染率函数由指数分布表示时,弱二郎记忆核可以保证稳定性。然而,通过数值模拟,我们表明,当记忆更集中于疾病的过去历史时,可能会出现振荡,而且可能是自我维持的振荡。我们还展示了在不同感染率函数情况下的模型解决方案,这些感染率函数来自对流感和 SARS 等特定疾病的研究。
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引用次数: 0
Exchangeable coalescents beyond the Cannings class. 坎宁类以外的可交换聚结物。
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-17 DOI: 10.1007/s00285-024-02173-x
Arno Siri-Jégousse, Alejandro H Wences

We propose a general framework for the study of the genealogy of neutral discrete-time populations. We remove the standard assumption of exchangeability of offspring distributions appearing in Cannings models, and replace it by a less restrictive condition of non-heritability of reproductive success. We provide a general criterion for the weak convergence of their genealogies to Ξ -coalescents, and apply it to a simple parametrization of our scenario (which, under mild conditions, we also prove to essentially include the general case). We provide examples for such populations, including models with highly-asymmetric offspring distributions and populations undergoing random but recurrent bottlenecks. Finally we study the limit genealogy of a new exponential model which, as previously shown for related models and in spite of its built-in (fitness) inheritance mechanism, can be brought into our setting.

我们提出了中性离散种群谱系研究的一般框架。我们去掉了坎宁模型中出现的后代分布的可交换性的标准假设,代之以生殖成功的非遗传性这一限制性较小的条件。我们提供了它们的谱系弱收敛到Ξ -coalescents的一般准则,并将其应用于我们的场景的简单参数化(在温和的条件下,我们也证明了基本上包括一般情况)。我们为这样的种群提供了例子,包括具有高度不对称后代分布的模型和经历随机但周期性瓶颈的种群。最后,我们研究了一种新的指数模型的极限谱系,正如前面对相关模型所展示的那样,尽管它具有内置的(适应度)遗传机制,但它可以引入我们的设置。
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引用次数: 0
Replicator dynamics generalized for evolutionary matrix games under time constraints. 时间限制下进化矩阵博弈的复制器动力学。
IF 2.2 4区 数学 Q2 BIOLOGY Pub Date : 2024-12-15 DOI: 10.1007/s00285-024-02170-0
Tamás Varga

One of the central results of evolutionary matrix games is that a state corresponding to an evolutionarily stable strategy (ESS) is an asymptotically stable equilibrium point of the standard replicator dynamics. This relationship is crucial because it simplifies the analysis of dynamic phenomena through static inequalities. Recently, as an extension of classical evolutionary matrix games, matrix games under time constraints have been introduced (Garay et al. in J Theor Biol 415:1-12, 2017; Křivan and Cressman in J Theor Biol 416:199-207, 2017). In this model, after an interaction, players do not only receive a payoff but must also wait a certain time depending on their strategy before engaging in another interaction. This waiting period can significantly impact evolutionary outcomes. We found that while the aforementioned classical relationship holds for two-dimensional strategies in this model (Varga et al. in J Math Biol 80:743-774, 2020), it generally does not apply for three-dimensional strategies (Varga and Garay in Dyn Games Appl, 2024). To resolve this problem, we propose a generalization of the replicator dynamics that considers only individuals in active state, i.e., those not waiting, can interact and gain resources. We prove that using this generalized dynamics, the classical relationship holds true for matrix games under time constraints in any dimension: a state corresponding to an ESS is asymptotically stable. We believe this generalized replicator dynamics is more naturally aligned with the game theoretical model under time constraints than the classical form. It is important to note that this generalization reduces to the original replicator dynamics for classical matrix games.

演化矩阵博弈的核心结果之一是,与演化稳定策略(ESS)相对应的状态是标准复制器动力学的渐近稳定均衡点。这一关系至关重要,因为它简化了通过静态不等式对动态现象的分析。最近,作为经典进化矩阵博弈的扩展,人们引入了时间约束下的矩阵博弈(Garay 等人,载于《J Theor Biol》415:1-12,2017 年;Křivan 和 Cressman,载于《J Theor Biol》416:199-207,2017 年)。在这一模型中,互动之后,参与者不仅会获得报酬,还必须根据自己的策略等待一段时间,然后才能进行另一次互动。这个等待时间会对进化结果产生重大影响。我们发现,虽然上述经典关系适用于该模型中的二维策略(Varga 等人,发表于 J Math Biol 80:743-774, 2020),但一般不适用于三维策略(Varga 和 Garay,发表于 Dyn Games Appl, 2024)。为了解决这个问题,我们提出了一种广义的复制器动力学,认为只有处于活跃状态的个体,即那些没有等待的个体,才能相互作用并获得资源。我们证明,使用这种广义动态,经典关系在任何维度的时间约束下对矩阵博弈都是成立的:对应于 ESS 的状态是渐进稳定的。我们认为,与经典形式相比,这种广义复制器动力学与时间约束下的博弈理论模型更自然地吻合。值得注意的是,这种广义的复制器动力学还原了经典矩阵博弈的原始复制器动力学。
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引用次数: 0
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Journal of Mathematical Biology
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