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Ubiquitin-independent proteasomal degradation of Spindlin-1 by the E3 ligase HACE1 contributes to cell-cell adhesion. E3连接酶HACE1对Spindlin-1的非泛素依赖性蛋白酶体降解有助于细胞-细胞粘附。
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-02-01 Epub Date: 2021-02-02 DOI: 10.1002/1873-3468.14031
Vivek Reddy Palicharla, Devanshi Gupta, Debjani Bhattacharya, Subbareddy Maddika

HECT-E3 ligases play an essential role in catalyzing the transfer of ubiquitin to protein substrates. The noncatalytic roles of HECT-E3 ligases in cells are unknown. Here, we report that a HECT-E3 ligase, HACE1, functions as an adaptor independent of its E3 ligase activity. We identified Spindlin-1, a histone reader, as a new HACE1-associated protein. Interestingly, we found that HACE1 promotes Spindlin-1 degradation via the proteasome in an ubiquitination-independent manner. Functionally, we demonstrated that the loss of HACE1 results in weak cell-cell adhesion due to Spindlin-1-mediated accumulation of GDNF, a negative regulator of cell adhesion. Together, our data suggest that HACE1 acts as a molecular adaptor and plays an important noncatalytic role in presenting selected substrates directly to the proteasome for degradation.

HECT-E3连接酶在催化泛素转移到蛋白质底物中起着至关重要的作用。HECT-E3连接酶在细胞中的非催化作用尚不清楚。在这里,我们报道了HECT-E3连接酶HACE1作为一个独立于其E3连接酶活性的适配器发挥作用。我们鉴定出组蛋白解读器Spindlin-1是一种新的hace1相关蛋白。有趣的是,我们发现HACE1以不依赖泛素化的方式通过蛋白酶体促进Spindlin-1的降解。在功能上,我们证明HACE1的缺失会导致细胞粘附减弱,这是由于spindlin -1介导的GDNF积累,GDNF是细胞粘附的负调节因子。总之,我们的数据表明,HACE1作为一个分子接头,在将选定的底物直接呈现给蛋白酶体进行降解方面起着重要的非催化作用。
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引用次数: 3
Front Cover 前盖
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-02-01 DOI: 10.1002/1873-3468.13821
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引用次数: 0
Identification and characterization of the hemoglobin-binding domain of hemoglobin receptor in Leishmania. 利什曼原虫血红蛋白受体血红蛋白结合区域的鉴定与表征。
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-02-01 Epub Date: 2021-01-02 DOI: 10.1002/1873-3468.14027
Ruchir Rastogi, Jitender Kumar Verma, Vijay Singh, Ganga Krishnamurthy, Chandni Sood, Anjali Kapoor, Kamal Kumar, Irshad Ansari, Amitabha Mukhopadhyay

Leishmania internalize hemoglobin (Hb) via a specific receptor (HbR) for their survival. To identify the Hb-binding domain of HbR, we cloned and expressed several truncated proteins of HbR and determined their ability to bind Hb. Our findings reveal that 90% of Hb-binding activity is retained in HbR41-80 in comparison with HbR1-471 . We synthesized a 40 amino acid peptide (SSEKMKQLTMYMIHEMVEGLEGRPSTVRMLPSFVYTSDPA) corresponding to HbR41-80 and found that it specifically binds Hb. Subsequently, we found that the HbR41-80 peptide completely blocks Hb uptake in both promastigote and amastigote forms of Leishmania and, thereby, inhibits the growth of the parasite. These results demonstrate that HbR41-80 is the Hb-binding domain of HbR, which might be used as a potential therapeutic agent to inhibit the growth of Leishmania.

利什曼原虫通过特定受体(HbR)内化血红蛋白(Hb)以维持生存。为了确定HbR的Hb结合结构域,我们克隆并表达了几个HbR的截断蛋白,并确定了它们与Hb的结合能力。我们的研究结果显示,与HbR1-471相比,HbR41-80中保留了90%的hb结合活性。我们合成了一个与HbR41-80对应的40个氨基酸的肽(SSEKMKQLTMYMIHEMVEGLEGRPSTVRMLPSFVYTSDPA),发现它特异性结合Hb。随后,我们发现HbR41-80肽完全阻断利什曼原虫promastigote和amastigote形式的Hb摄取,从而抑制寄生虫的生长。这些结果表明,HbR41-80是HbR的hb结合结构域,可能作为抑制利什曼原虫生长的潜在治疗剂。
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引用次数: 3
Cytosolic PINK1 orchestrates protein translation during proteasomal stress by phosphorylating the translation elongation factor eEF1A1. 胞浆PINK1通过磷酸化翻译延伸因子eEF1A1调控蛋白酶体应激过程中的蛋白翻译。
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-02-01 Epub Date: 2021-01-06 DOI: 10.1002/1873-3468.14030
Siyue Qin, Ling Ye, Youshi Zheng, Ju Gao

Mutations in PINK1 (PTEN-induced putative kinase 1) are associated with autosomal recessive early-onset Parkinson's disease. Full-length PINK1 (PINK1-l) has been extensively studied in mitophagy; however, the functions of the short form of PINK1 (PINK1-s) remain poorly understood. Here, we report that PINK1-s is recruited to ribosome fractions after short-term inhibition of proteasomes. The expression of PINK1-s greatly inhibits protein synthesis even without proteasomal stress. Mechanistically, PINK1-s phosphorylates the translation elongation factor eEF1A1 during proteasome inhibition. The expression of the phosphorylation mimic mutation eEF1A1S396E rescues protein synthesis defects and cell viability caused by PINK1 knockout. These findings implicate an important role for PINK1-s in protecting cells against proteasome stress through inhibiting protein synthesis.

PINK1 (pten诱导的推定激酶1)突变与常染色体隐性早发性帕金森病相关。全长PINK1 (PINK1- 1)在线粒体自噬中被广泛研究;然而,人们对PINK1的简写形式(PINK1-s)的功能知之甚少。在这里,我们报告了PINK1-s在蛋白酶体的短期抑制后被招募到核糖体部分。即使在没有蛋白酶体应激的情况下,PINK1-s的表达也能极大地抑制蛋白合成。在机制上,PINK1-s在蛋白酶体抑制过程中磷酸化翻译延伸因子eEF1A1。磷酸化模拟突变eEF1A1S396E的表达挽救了PINK1敲除引起的蛋白质合成缺陷和细胞活力。这些发现暗示了PINK1-s通过抑制蛋白质合成在保护细胞免受蛋白酶体应激中的重要作用。
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引用次数: 8
mTORC1-mediated amino acid signaling is critical for cell fate determination under transplant-induced stress. mtorc1介导的氨基酸信号是移植诱导应激下细胞命运决定的关键。
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-02-01 Epub Date: 2020-12-08 DOI: 10.1002/1873-3468.14008
Xiaoyan Cheng, Maolin Ge, Shouhai Zhu, Dan Li, Ruiheng Wang, Qiongyu Xu, Zhihong Chen, Shufeng Xie, Han Liu

Transplantation of in vitro-manipulated cells is widely used in hematology. While transplantation is well recognized to impose severe stress on transplanted cells, the nature of transplant-induced stress remains elusive. Here, we propose that the lack of amino acids in serum is the major cause of transplant-induced stress. Mechanistically, amino acid deficiency decreases protein synthesis and nutrient consummation. However, in cells with overactive AKT and ERK, mTORC1 is not inhibited and protein synthesis remains relatively high. This impaired signaling causes nutrient depletion, cell cycle block, and eventually autophagy and cell death, which can be inhibited by cycloheximide or mTORC1 inhibitors. Thus, mTORC1-mediated amino acid signaling is critical in cell fate determination under transplant-induced stress, and protein synthesis inhibition can improve transplantation efficiency.

体外操作细胞移植在血液学中有着广泛的应用。虽然移植被认为对移植细胞施加了严重的压力,但移植诱导的压力的性质仍然是难以捉摸的。在这里,我们提出血清中氨基酸的缺乏是移植诱导应激的主要原因。从机制上讲,氨基酸缺乏会减少蛋白质合成和营养物质的消耗。然而,在AKT和ERK过度活跃的细胞中,mTORC1不受抑制,蛋白质合成仍然相对较高。这种信号通路受损导致营养物质消耗,细胞周期阻滞,最终自噬和细胞死亡,可被环己亚胺或mTORC1抑制剂抑制。因此,mtorc1介导的氨基酸信号在移植诱导应激下决定细胞命运的过程中起着至关重要的作用,抑制蛋白质合成可以提高移植效率。
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引用次数: 1
Adhesion-dependent Caveolin-1 Tyrosine-14 phosphorylation is regulated by FAK in response to changing matrix stiffness. 粘附依赖性Caveolin-1酪氨酸-14磷酸化受FAK调节,以响应基质刚度的变化。
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-02-01 Epub Date: 2021-01-17 DOI: 10.1002/1873-3468.14025
Natasha Buwa, Nivedhika Kannan, Shaunak Kanade, Nagaraj Balasubramanian

Integrin-mediated adhesion regulates cellular responses to changes in the mechanical and biochemical properties of the extracellular matrix. Cell-matrix adhesion regulates caveolar endocytosis, dependent on caveolin 1 (Cav1) Tyr14 phosphorylation (pY14Cav1), to control anchorage-dependent signaling. We find that cell-matrix adhesion regulates pY14Cav1 levels in mouse fibroblasts. Biochemical fractionation reveals endogenous pY14Cav1 to be present in caveolae and focal adhesions (FA). Adhesion does not affect caveolar pY14Cav1, supporting its regulation at FA, in which PF-228-mediated inhibition of focal adhesion kinase (FAK) disrupts. Cell adhesion on 2D polyacrylamide matrices of increasing stiffness stimulates Cav1 phosphorylation, which is comparable to the phosphorylation of FAK. Inhibition of FAK across varying stiffnesses shows it regulates pY14Cav1 more prominently at higher stiffness. Taken together, these studies reveal the presence of FAK-pY14Cav1 crosstalk at FA, which is regulated by cell-matrix adhesion.

整合素介导的粘附调节细胞对细胞外基质机械和生化特性变化的反应。细胞-基质粘附调节腔泡内吞作用,依赖于腔泡蛋白1 (Cav1) Tyr14磷酸化(pY14Cav1),以控制锚定依赖性信号。我们发现细胞-基质粘附调节小鼠成纤维细胞中pY14Cav1的水平。生化分离显示内源性pY14Cav1存在于小泡和局灶粘连(FA)中。粘附不影响空泡pY14Cav1,支持其在FA的调控,其中pf -228介导的局灶粘附激酶(FAK)抑制被破坏。细胞粘附在刚度增加的二维聚丙烯酰胺基质上刺激Cav1磷酸化,这与FAK的磷酸化相当。FAK在不同刚度下对pY14Cav1的抑制作用表明,FAK在高刚度下对pY14Cav1的调节作用更为显著。综上所述,这些研究揭示了FA中存在FAK-pY14Cav1串扰,该串扰受细胞-基质粘附调节。
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引用次数: 2
Defining the architecture of the human TIM22 complex by chemical crosslinking. 通过化学交联确定人体TIM22复合物的结构。
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-01-01 Epub Date: 2020-11-13 DOI: 10.1002/1873-3468.13978
Anusha Valpadashi, Sylvie Callegari, Andreas Linden, Piotr Neumann, Ralf Ficner, Henning Urlaub, Markus Deckers, Peter Rehling

The majority of mitochondrial proteins are nuclear encoded and imported into mitochondria as precursor proteins via dedicated translocases. The translocase of the inner membrane 22 (TIM22) is a multisubunit molecular machine specialized for the translocation of hydrophobic, multi-transmembrane-spanning proteins with internal targeting signals into the inner mitochondrial membrane. Here, we undertook a crosslinking-mass spectrometry (XL-MS) approach to determine the molecular arrangement of subunits of the human TIM22 complex. Crosslinking of the isolated TIM22 complex using the BS3 crosslinker resulted in the broad generation of crosslinks across the majority of TIM22 components, including the small TIM chaperone complex. The crosslinking data uncovered several unexpected features, opening new avenues for a deeper investigation into the steps required for TIM22-mediated translocation in humans.

大多数线粒体蛋白是核编码的,并通过专门的转座作为前体蛋白导入线粒体。内膜转位酶22 (TIM22)是一种多亚基分子机器,专门用于将具有内部靶向信号的疏水、多跨膜跨越蛋白易位到线粒体内膜。在这里,我们采用了交联质谱(XL-MS)方法来确定人TIM22复合物亚基的分子排列。使用BS3交联剂对分离的TIM22复合物进行交联,导致TIM22大部分组分广泛产生交联,包括小的TIM伴侣复合物。交联数据揭示了几个意想不到的特征,为深入研究tim22介导的人类易位所需的步骤开辟了新的途径。
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引用次数: 4
Front Cover 封面
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2021-01-01 DOI: 10.1002/1873-3468.13819
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引用次数: 0
A multicentre, randomised controlled clinical study of drug-coated balloons for the treatment of coronary in-stent restenosis. 药物涂层球囊治疗冠状动脉支架内再狭窄的多中心随机对照临床研究。
IF 7.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2020-07-17 DOI: 10.4244/EIJ-D-19-00051
Christian W Hamm, Oliver Dörr, Jochen Woehrle, Florian Krackhardt, Hüseyin Ince, Tobias Zeus, Jacques Berland, Christophe Piot, Francois Roubille, Ingolf Schult, Dominic J Allocco, Holger Nef

Aims: Treatment of in-stent restenosis of coronary stents is challenging. The use of drug-coated balloons (DCB) is a promising technique to treat in-stent restenosis without adding another metal layer. The aim of the AGENT ISR randomised trial is to evaluate angiographic and clinical outcomes in patients with ISR of a previously treated lesion who were treated with either a DCB with a new coating formulation (Agent) or a standard DCB (SeQuent Please).

Methods and results: AGENT ISR is a multicentre, randomised, open-label, non-inferiority study comparing the Agent and SeQuent Please DCB. A total of 125 patients (mean age ~68 years, 18% female) with in-stent restenosis of a previously treated lesion <28 mm in length were randomised at 11 sites in Europe to Agent (n=65) or SeQuent Please (n=60). The primary endpoint, six-month in-stent late lumen loss, in the Agent group (0.397±0.43 mm [n=51]) was non-inferior to that of the SeQuent Please group (0.393±0.536 mm [n=49]), as the two-sided upper 95% confidence boundary for the difference between groups was less than the pre-specified non-inferiority margin of 0.20 (difference 0.004, 95% CI [-0.189, 0.196]; pnon-inferiority=0.046). At one year, mortality was 3.1% in Agent and 1.7% in SeQuent Please patients (p>0.99), target lesion revascularisation 7.7% versus 10.0% (p=0.89), and stent thrombosis 0% versus 3.3% (p=0.44). Similar improvements in quality of life were seen in the two groups.

Conclusions: In this head-to-head comparison of two DCB, Agent proved to be non-inferior to SeQuent Please for in-stent late lumen loss at six months.

Clinical trials registration: NCT02151812 (http://clinicaltrials.gov/).

目的:冠状动脉支架内再狭窄的治疗具有挑战性。使用药物涂层球囊(DCB)是一种治疗支架内再狭窄而无需增加另一层金属的有前途的技术。AGENT ISR 随机试验的目的是评估曾接受过治疗的病变 ISR 患者接受新型涂层配方 DCB(Agent)或标准 DCB(SeQuent Please)治疗后的血管造影和临床效果:AGENT ISR是一项比较Agent和SeQuent Please DCB的多中心、随机、开放标签、非劣效性研究。共有 125 名患者(平均年龄约 68 岁,18% 为女性)接受了这项研究,他们的支架内再狭窄率为 0.99,靶病变血运重建率为 7.7% 对 10.0%(P=0.89),支架血栓形成率为 0% 对 3.3%(P=0.44)。两组患者的生活质量改善情况相似:结论:在这一两种DCB的头对头比较中,Agent在6个月的支架内晚期管腔损失方面证明不劣于SeQuent Please:临床试验注册:NCT02151812 (http://clinicaltrials.gov/)。
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引用次数: 0
Structural characterization of an Arf dimer interface: molecular mechanism of Arf-dependent membrane scission. Arf二聚体界面的结构表征:Arf依赖膜断裂的分子机制。
IF 3.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2020-07-01 Epub Date: 2020-05-31 DOI: 10.1002/1873-3468.13808
Petra Diestelkoetter-Bachert, Rainer Beck, Inge Reckmann, Andrea Hellwig, Ana Garcia-Saez, Monika Zelman-Hopf, Anton Hanke, Ariane Nunes Alves, Rebecca C Wade, Matthias P Mayer, Felix Wieland

Dimerization of the small GTPase Arf is prerequisite for the scission of COPI-coated transport vesicles. Here, we quantify the monomer/dimer equilibrium of Arf within the membrane and show that after membrane scission, Arf dimers are restricted to donor membranes. By hydrogen exchange mass spectrometry, we define the interface of activated dimeric Arf within its switch II region. Single amino acid exchanges in this region reduce the propensity of Arf to dimerize. We suggest a mechanism of membrane scission by which the dimeric form of Arf is segregated to the donor membrane. Our data are consistent with the previously reported absence of dimerized Arf in COPI vesicles and could explain the presence of one single scar-like noncoated region in each COPI vesicle.

小GTPase Arf的二聚化是copi包被转运囊泡分裂的先决条件。在这里,我们量化了膜内Arf的单体/二聚体平衡,并表明在膜断裂后,Arf二聚体被限制在供体膜上。通过氢交换质谱法,我们确定了活化二聚体Arf在其开关II区的界面。该区域的单氨基酸交换降低了Arf二聚化的倾向。我们提出了一种膜分裂机制,通过这种机制,二聚体形式的Arf被分离到供体膜上。我们的数据与先前报道的COPI囊泡中不存在二聚化的Arf一致,并且可以解释每个COPI囊泡中存在单个疤痕样非包被区域。
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引用次数: 9
期刊
FEBS Letters
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