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Epigenetic reprogramming in mouse and human primordial germ cells 小鼠和人类原始生殖细胞的表观遗传重编程。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-13 DOI: 10.1038/s12276-024-01359-z
Sun-Min Lee, M. Azim Surani
Primordial germ cells (PGCs) are the precursors of sperm and eggs. They undergo genome-wide epigenetic reprogramming to erase epigenetic memory and reset the genomic potential for totipotency. Global DNA methylation erasure is a crucial part of epigenetic resetting when DNA methylation levels decrease across the genome to <5%. However, certain localized regions exhibit slower demethylation or resistance to reprogramming. Since DNA methylation plays a crucial role in transcriptional regulation, this depletion in PGCs requires mechanisms independent of DNA methylation to regulate transcriptional control during PGC reprogramming. Histone modifications are predicted to compensate for the loss of DNA methylation in gene regulation. Different histone modifications exhibit distinct patterns in PGCs undergoing epigenetic programming at the genomic level during PGC development in conjunction with changes in DNA methylation. Together, they contribute to PGC-specific genomic regulation. Recent findings related to these processes provide a comprehensive overview of germline epigenetic reprogramming and its importance in mouse and human PGC development. Additionally, we evaluated the extent to which in vitro culture techniques have replicated the development processes of human PGCs. Primordial germ cells (PGCs), which eventually become eggs or sperm, undergo unique and important changes early in their development that are crucial for forming a complete organism after fertilization. Recent studies have advanced our understanding of these changes. This review explains how certain processes, such as adding chemical markers to DNA (DNA methylation) and modifying proteins around DNA (histone modifications), control the development of PGCs in humans and mice. It also explores the replication of these processes in the lab using human stem cells. This review provides important insights into the impact of these changes on reproduction and offers potential new avenues for treating infertility. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
原始生殖细胞(PGC)是精子和卵子的前身。它们会进行全基因组表观遗传重编程,以清除表观遗传记忆并重置基因组潜能,从而获得全能性。当整个基因组的DNA甲基化水平降低到以下程度时,全局DNA甲基化清除是表观遗传重置的关键部分
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引用次数: 0
Essential role of Card11 in airway hyperresponsiveness in high-fat diet-induced obese mice Card11 在高脂饮食诱导的肥胖小鼠气道高反应性中的重要作用
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-13 DOI: 10.1038/s12276-024-01367-z
Hyun-Seung Lee, Byung-Keun Kim, Suh-Young Lee, Hyuktae Kwon, Heung-Woo Park
A high-fat diet (HFD) can induce airway hyperresponsiveness (AHR) in obese mice, independent of allergic sensitization. This study aimed to identify the key molecules related to AHR in HFD-induced obese mice. In a cluster analysis of time series gene expression in the adipose and lung tissues of HFD-induced obese mice, we identified the Caspase Recruitment Domain Family Member 11 (Card11) gene as an essential molecule. We measured CARD11 expression in peripheral blood mononuclear cells (PBMCs) from obese individuals with asthma and performed Card11 signal inhibition in HFD-induced obese mice via Card11 siRNA. Card11 expression was significantly increased in M1 macrophages (IL-1β+CD11c+CD206- in CD11b+) in adipose tissue and in ILC3s (RORγt+ in IL7R+ of Lin-) in lung tissue from HFD-induced obese mice. In addition, CARD11+ populations among ILC3s and LPS-stimulated IL-1β+CD16+ monocytes from the PBMCs of obese individuals with asthma were significantly greater than those from obese controls or nonobese individuals with asthma. AHR in HFD-induced obese mice disappeared when we inhibited the Card11 signaling pathway by administering Card11 siRNA during the first or last seven weeks of the 13-week HFD feeding. Finally, we confirmed that Card11 siRNA decreased the number of M1 macrophages in adipose tissue and the number of ILC3s in lung tissue in vitro. Card11 significantly contributes to the development of AHR in HFD-induced obese mice by affecting immune cells in both adipose and lung tissues. The middle stage of HFD feeding seemed to be critical for these processes. Obesity is a metabolic disease and a major risk factor for several non-communicable diseases. The link between obesity and asthma is not fully understood. The study used a murine model to investigate how obesity affects asthma. Researchers fed mice a high-fat diet and analyzed gene expression in their adipose and lung tissues. They identified the Card11 gene as a key player in airway hyperresponsiveness in obese mice. This was an experimental study involving mice. Results showed that Card11 expression increased in immune cells from both adipose and lung tissues of obese mice. Inhibiting Card11 reduced AHR and inflammation. Researchers concluded that Card11 is crucial in obesity-related asthma. Future studies could explore Card11 as a therapeutic target for asthma in obese individuals. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
高脂肪饮食(HFD)可以诱导肥胖小鼠气道高反应性(AHR),独立于过敏致敏。本研究旨在确定hfd诱导肥胖小鼠AHR相关的关键分子。通过对hfd诱导的肥胖小鼠脂肪和肺组织中基因时间序列表达的聚类分析,我们发现Caspase募集结构域家族成员11 (Card11)基因是一个重要分子。我们测量了肥胖哮喘患者外周血单个核细胞(PBMCs)中CARD11的表达,并通过CARD11 siRNA对hfd诱导的肥胖小鼠进行了CARD11信号抑制。脂肪组织中M1巨噬细胞(IL-1β+CD11c+ CD11b+中的CD206-)和肺组织中ILC3s (Lin-中IL7R+中的rorγ - t+)中Card11的表达显著升高。此外,肥胖哮喘患者PBMCs中ILC3s和lps刺激的IL-1β+CD16+单核细胞中的CARD11+群体显著高于肥胖对照或非肥胖哮喘患者。当我们在13周HFD喂养的前7周或后7周通过给药Card11 siRNA抑制Card11信号通路时,HFD诱导的肥胖小鼠AHR消失。最后,我们在体外证实了Card11 siRNA降低了脂肪组织中M1巨噬细胞的数量和肺组织中ILC3s的数量。Card11通过影响脂肪和肺组织中的免疫细胞,显著促进hfd诱导的肥胖小鼠AHR的发展。HFD饲喂的中期似乎对这些过程至关重要。
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引用次数: 0
GRIM-19-mediated induction of mitochondrial STAT3 alleviates systemic sclerosis by inhibiting fibrosis and Th2/Th17 cells grim -19介导的线粒体STAT3通过抑制纤维化和Th2/Th17细胞减轻系统性硬化症。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-06 DOI: 10.1038/s12276-024-01366-0
Ha Yeon Jeong, Jin-Sil Park, Jeong Won Choi, Kun Hee Lee, Seung Cheon Yang, Hye Yeon Kang, Sang Hee Cho, Seon-Yeong Lee, A Ram Lee, Youngjae Park, Sung-Hwan Park, Mi-La Cho
The gene associated with the retinoid–IFN-induced mortality-19 (GRIM-19) protein is a regulator of a cell death regulatory protein that inhibits STAT3, which is a critical transcription factor for interleukin (IL)-17-producing T (Th17) cells and a key integrator of extracellular matrix accumulation in systemic sclerosis (SSc). This protein is also a component of mitochondrial complex I, where it directly binds to STAT3 and recruits STAT3 to the mitochondria via the mitochondrial importer Tom20. In this study, the role of GRIM19 and its relationship with STAT3 in SSc development was investigated using a murine model of SSc. We observed a decrease in the level of GRIM-19 in the lesional skin of mice with bleomycin-induced SSc, which was negatively correlated with the level of STAT3. Overexpression of GRIM-19 reduced dermal thickness and fibrosis and the frequency of Th2 and Th17 cells in SSc mice. Mitophagic dysfunction promoted fibrosis in mice lacking PINK1, which is a mitophagy inducer. In an in vitro system, the overexpression of GRIM-19 increased the level of mitochondrial STAT3 (mitoSTAT3), induced mitophagy, and alleviated fibrosis progression. MitoSTAT3 overexpression hindered the development of bleomycin-induced SSc by reducing fibrosis. These results suggest that GRIM-19 is an effective therapeutic target for alleviating the development of SSc by increasing mitophagy. Systemic sclerosis is an autoimmune disease causing skin and organ fibrosis. The exact cause is unknown, but inflammation plays a key role. Researchers found a gap in understanding how the GRIM-19 protein affects SSc. Ha Yeon Jeong and colleagues conducted experiments on mice to explore this. The study involved injecting mice with a substance to induce SSc and then treating them with a GRIM-19 plasmid (a small DNA molecule). This experiment aimed to see if GRIM-19 could reduce fibrosis. The study type was an experiment involving 8-week-old male mice. Results showed that overexpression of GRIM-19 reduced skin thickness and inflammation in SSc mice. The researchers concluded that GRIM-19 helps control fibrosis by interacting with mitochondrial STAT3 (a protein involved in cell signaling). Future research could explore GRIM-19 as a potential treatment for SSc. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
与类维生素a - ifn诱导的死亡-19 (GRIM-19)蛋白相关的基因是抑制STAT3的细胞死亡调节蛋白的调控因子,STAT3是产生白细胞介素(IL)-17的T (Th17)细胞的关键转录因子,也是系统性硬化症(SSc)细胞外基质积累的关键整合子。该蛋白也是线粒体复合体I的一个组成部分,它直接与STAT3结合,并通过线粒体进口蛋白Tom20将STAT3招募到线粒体。在本研究中,我们利用小鼠SSc模型研究了GRIM19在SSc发育中的作用及其与STAT3的关系。我们观察到,在博莱霉素诱导的SSc小鼠病变皮肤中,GRIM-19水平下降,与STAT3水平呈负相关。GRIM-19的过表达减少了SSc小鼠真皮厚度和纤维化以及Th2和Th17细胞的频率。在缺乏PINK1的小鼠中,线粒体自噬功能障碍促进了纤维化,PINK1是一种线粒体自噬诱导因子。在体外系统中,GRIM-19的过表达增加了线粒体STAT3 (mitoSTAT3)的水平,诱导了线粒体自噬,减轻了纤维化的进展。MitoSTAT3过表达通过减少纤维化阻碍了博莱霉素诱导的SSc的发展。这些结果表明,GRIM-19是通过增加线粒体自噬来缓解SSc发展的有效治疗靶点。
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引用次数: 0
Author Correction: Renal fibroblasts are involved in fibrogenic changes in kidney fibrosis associated with dysfunctional telomeres 作者更正:肾成纤维细胞参与与端粒功能障碍相关的肾纤维化的成纤维性改变。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-04 DOI: 10.1038/s12276-024-01370-4
Sarita Saraswati, Paula Martínez, Rosa Serrano, Diego Mejías, Osvaldo Graña-Castro, Ruth Álvarez Díaz, Maria A. Blasco
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引用次数: 0
TIGAR coordinates senescence-associated secretory phenotype via lysosome repositioning and α-tubulin deacetylation TIGAR通过溶酶体重新定位和α-微管蛋白去乙酰化来协调衰老相关的分泌表型。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-04 DOI: 10.1038/s12276-024-01362-4
Hae Yun Nam, Seung-Ho Park, Geun-Hee Lee, Eun-Young Kim, SangEun Lee, Hyo Won Chang, Eun-Ju Chang, Kyung-Chul Choi, Seong Who Kim
TP53-induced glycolysis and apoptosis regulator (TIGAR) regulates redox homeostasis and provides the intermediates necessary for cell growth by reducing the glycolytic rate. During cellular senescence, cells undergo metabolic rewiring towards the glycolytic pathway, along with the development of the senescence-associated secretory phenotype (SASP), also known as the secretome. We observed that TIGAR expression increased during replicative senescence following the in vitro expansion of human mesenchymal stromal cells (MSCs) and that TIGAR knockout (KO) decreased SASP factors and triggered premature senescence with decelerated progression. Additionally, TIGAR KO impaired flexible lysosomal movement to the perinuclear region and decreased the autophagic flux of MSCs. Research on the mechanism of lysosomal movement revealed that, while native senescent MSCs presented low levels of Ac-α-tubulin (lysine 40) and increased sirtuin 2 (SIRT2) activity compared with those in growing cells, TIGAR KO-MSCs maintained Ac-α-tubulin levels and exhibited decreased SIRT2 activity despite being in a senescent state. The overexpression of SIRT2 reduced Ac-α-tubulin as a protein target of SIRT2 and induced the positioning of lysosomes at the perinuclear region, restoring the cytokine secretion of TIGAR KO-MSCs. Furthermore, TIGAR expression was positively correlated with SIRT2 activity, indicating that TIGAR affects SIRT2 activity partly by modulating the NAD+ level. Thus, our study demonstrated that TIGAR provides a foundation that translates the regulation of energy metabolism into lysosome positioning, affecting the secretome for senescence development. Considering the functional value of the cell-secretome in aging-related diseases, these findings suggest the feasibility of TIGAR for the regulation of secretory phenotypes. Cellular senescence is a process where cells stop dividing due to stress. Researchers found that the protein TIGAR plays a role in this process, but its exact function was unclear. In this study, researchers explored how TIGAR affects cellular senescence. They used mesenchymal stromal cells from human umbilical cord blood and conducted experiments to knock out TIGAR using CRISPR-Cas9 technology. They found that knocking out TIGAR led to early onset but slower progression of senescence. TIGAR knockout cells showed changes in lysosome positioning, reduced autophagic flux, and altered secretion of cytokines. These changes were linked to the acetylation of α-tubulin, a protein that helps in cell structure and transport. The results suggest that TIGAR regulates cellular senescence by affecting lysosome positioning and autophagy through SIRT2, an enzyme that deacetylates α-tubulin. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
tp53诱导的糖酵解和凋亡调节剂(TIGAR)通过降低糖酵解速率来调节氧化还原稳态,并提供细胞生长所需的中间体。在细胞衰老过程中,随着衰老相关分泌表型(SASP),也称为分泌组的发展,细胞向糖酵解途径进行代谢重组。我们观察到,随着人间充质间质细胞(MSCs)的体外扩增,在复制性衰老过程中,TIGAR的表达增加,TIGAR敲除(KO)会降低SASP因子,引发提前衰老,并减缓衰老进程。此外,TIGAR - KO损害了向核周区域的柔性溶酶体运动,并降低了间充质干细胞的自噬通量。对溶酶体运动机制的研究表明,与生长细胞相比,天然衰老MSCs的Ac-α-微管蛋白(赖氨酸40)水平较低,SIRT2活性升高,而TIGAR KO-MSCs虽然处于衰老状态,但仍保持Ac-α-微管蛋白水平,SIRT2活性降低。SIRT2的过表达降低了作为SIRT2蛋白靶点的Ac-α-微管蛋白,诱导溶酶体在核周区域定位,恢复TIGAR KO-MSCs的细胞因子分泌。此外,TIGAR表达与SIRT2活性呈正相关,表明TIGAR通过调节NAD+水平部分影响SIRT2活性。因此,我们的研究表明,TIGAR为将能量代谢的调节转化为溶酶体的定位,影响分泌组的衰老发展提供了基础。考虑到细胞分泌组在衰老相关疾病中的功能价值,这些发现提示TIGAR调节分泌表型的可行性。
{"title":"TIGAR coordinates senescence-associated secretory phenotype via lysosome repositioning and α-tubulin deacetylation","authors":"Hae Yun Nam,&nbsp;Seung-Ho Park,&nbsp;Geun-Hee Lee,&nbsp;Eun-Young Kim,&nbsp;SangEun Lee,&nbsp;Hyo Won Chang,&nbsp;Eun-Ju Chang,&nbsp;Kyung-Chul Choi,&nbsp;Seong Who Kim","doi":"10.1038/s12276-024-01362-4","DOIUrl":"10.1038/s12276-024-01362-4","url":null,"abstract":"TP53-induced glycolysis and apoptosis regulator (TIGAR) regulates redox homeostasis and provides the intermediates necessary for cell growth by reducing the glycolytic rate. During cellular senescence, cells undergo metabolic rewiring towards the glycolytic pathway, along with the development of the senescence-associated secretory phenotype (SASP), also known as the secretome. We observed that TIGAR expression increased during replicative senescence following the in vitro expansion of human mesenchymal stromal cells (MSCs) and that TIGAR knockout (KO) decreased SASP factors and triggered premature senescence with decelerated progression. Additionally, TIGAR KO impaired flexible lysosomal movement to the perinuclear region and decreased the autophagic flux of MSCs. Research on the mechanism of lysosomal movement revealed that, while native senescent MSCs presented low levels of Ac-α-tubulin (lysine 40) and increased sirtuin 2 (SIRT2) activity compared with those in growing cells, TIGAR KO-MSCs maintained Ac-α-tubulin levels and exhibited decreased SIRT2 activity despite being in a senescent state. The overexpression of SIRT2 reduced Ac-α-tubulin as a protein target of SIRT2 and induced the positioning of lysosomes at the perinuclear region, restoring the cytokine secretion of TIGAR KO-MSCs. Furthermore, TIGAR expression was positively correlated with SIRT2 activity, indicating that TIGAR affects SIRT2 activity partly by modulating the NAD+ level. Thus, our study demonstrated that TIGAR provides a foundation that translates the regulation of energy metabolism into lysosome positioning, affecting the secretome for senescence development. Considering the functional value of the cell-secretome in aging-related diseases, these findings suggest the feasibility of TIGAR for the regulation of secretory phenotypes. Cellular senescence is a process where cells stop dividing due to stress. Researchers found that the protein TIGAR plays a role in this process, but its exact function was unclear. In this study, researchers explored how TIGAR affects cellular senescence. They used mesenchymal stromal cells from human umbilical cord blood and conducted experiments to knock out TIGAR using CRISPR-Cas9 technology. They found that knocking out TIGAR led to early onset but slower progression of senescence. TIGAR knockout cells showed changes in lysosome positioning, reduced autophagic flux, and altered secretion of cytokines. These changes were linked to the acetylation of α-tubulin, a protein that helps in cell structure and transport. The results suggest that TIGAR regulates cellular senescence by affecting lysosome positioning and autophagy through SIRT2, an enzyme that deacetylates α-tubulin. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.","PeriodicalId":50466,"journal":{"name":"Experimental and Molecular Medicine","volume":"56 12","pages":"2726-2738"},"PeriodicalIF":9.5,"publicationDate":"2024-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.nature.com/articles/s12276-024-01362-4.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142781746","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The anticancer effect of metformin targets VDAC1 via ER-mitochondria interactions-mediated autophagy in HCC 二甲双胍在HCC中的抗癌作用是通过er -线粒体相互作用介导的自噬作用靶向VDAC1。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-03 DOI: 10.1038/s12276-024-01357-1
Minjeong Ko, Jiho Kim, Raudah Lazim, Ju Yeon Lee, Jin Young Kim, Vijayakumar Gosu, Yoonji Lee, Sun Choi, Ho Jeong Kwon
Metformin (MetF) is used worldwide as a first-line therapy for type 2 diabetes. Recently, interest in the pleiotropic effects of MetF, such as its anticancer and antiaging properties, has increased. However, the molecular target of MetF and the detailed mechanism underlying its ability to inhibit cell growth through autophagy induction remain incompletely understood. In this study, using an innovative label-free drug affinity responsive target stability (DARTS)-LC-MS/MS method, we discovered that mitochondrial voltage-dependent anion channel 1 (VDAC1) is a novel binding protein involved in the induction of autophagy-related cell death by high-dose MetF in hepatocellular carcinoma (HCC). Computational alanine scanning mutagenesis revealed that MetF and VDAC1 (D9, E203) interact electrostatically. MetF disrupts the IP3R-GRP75-VDAC1 complex, which plays a key role in stabilizing mitochondria-associated ER membranes (MAMs), by binding to VDAC1. This disruption leads to increased cytosolic calcium levels, thereby contributing to autophagy induction. MetF also decreased the AMP/ATP ratio and activated the AMPK pathway. Cells with genetic knockdown of VDAC1 mimicked the activity of MetF. In conclusion, this study provides new insights into the involvement of MetF in ionic interactions with VDAC1, contributing to its anticancer effects in HCC. These findings help elucidate the diverse biological and pharmacological effects of MetF, particularly its influence on autophagy, as well as the potential of MetF as a therapeutic agent for diseases characterized by VDAC1 overexpression. Metformin, a common type 2 diabetes drug, is known for its glucose-lowering effects. The study used several cell lines and advanced techniques to investigate how Metformin induces cancer cell death. This experimental research included cell cultures and molecular analysis. They found that Metformin targets a mitochondrial protein called VDAC1. This interaction disrupts energy production and increases autophagy, leading to cancer cell death. The results showed that Metformin binds to VDAC1, reducing mitochondrial calcium and ATP levels, which activates autophagy and kills cancer cells. The researchers concluded that the ionic interaction of Metformin with VDAC1 is critical for its anticancer effects. Future studies could explore Metformin as a treatment for cancers with high VDAC1 expression. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
二甲双胍(MetF)在世界范围内被用作2型糖尿病的一线治疗药物。最近,人们对MetF的多效性,如抗癌和抗衰老的特性,越来越感兴趣。然而,MetF的分子靶点及其通过诱导自噬抑制细胞生长的能力的详细机制仍不完全清楚。在这项研究中,我们使用一种创新的无标记药物亲和力响应靶标稳定性(DARTS)-LC-MS/MS方法,发现线粒体电压依赖性负离子通道1 (VDAC1)是一种新的结合蛋白,参与高剂量MetF诱导肝细胞癌(HCC)自噬相关细胞死亡。计算丙氨酸扫描诱变发现MetF与VDAC1 (D9, E203)之间存在静电相互作用。MetF通过与VDAC1结合,破坏IP3R-GRP75-VDAC1复合物,该复合物在稳定线粒体相关ER膜(MAMs)中起关键作用。这种破坏导致细胞质钙水平增加,从而促进自噬诱导。MetF还降低了AMP/ATP比值,激活了AMPK通路。基因敲低VDAC1的细胞模仿MetF的活性。总之,本研究为MetF参与与VDAC1的离子相互作用提供了新的见解,有助于其在HCC中的抗癌作用。这些发现有助于阐明MetF的多种生物学和药理学作用,特别是其对自噬的影响,以及MetF作为以VDAC1过表达为特征的疾病的治疗剂的潜力。
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引用次数: 0
Neddylation steers the fate of cellular receptors 类黄酮化控制着细胞受体的命运。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-02 DOI: 10.1038/s12276-024-01358-0
Jun Bum Park, Min Young Lee, Jooseung Lee, Geon Ho Moon, Sung Joon Kim, Yang-Sook Chun
Cellular receptors regulate physiological responses by interacting with ligands, thus playing a crucial role in intercellular communication. Receptors are categorized on the basis of their location and engage in diverse biochemical mechanisms, which include posttranslational modifications (PTMs). Considering the broad impact and diversity of PTMs on cellular functions, we focus narrowly on neddylation, a modification closely resembling ubiquitination. We systematically organize its canonical and noncanonical roles in modulating proteins associated with cellular receptors with the goal of providing a more detailed perspective on the intricacies of both intracellular and cell-surface receptors. Proteins undergo posttranslational modifications (PTMs) to maintain physiological balance. Neddylation, a type of PTM, involves attaching a small ubiquitin-like molecule, NEDD8, to target proteins. In this study, J.B.P. and colleagues explore the role of neddylation role in cellular receptors. The researchers conducted a review to understand how neddylation affects different types of receptors, including membrane and intracellular receptors. They examined both canonical (cullin-dependent) and noncanonical pathways regulated by neddylation. The study systematically analyzes the impact of neddylation on receptor stability, signaling, and function. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
细胞受体通过与配体的相互作用来调节生理反应,因此在细胞间通讯中起着至关重要的作用。受体根据其位置进行分类,并参与多种生化机制,其中包括翻译后修饰(PTMs)。考虑到ptm对细胞功能的广泛影响和多样性,我们将重点放在类化修饰上,这是一种与泛素化非常相似的修饰。我们系统地组织了它在调节与细胞受体相关的蛋白质中的规范和非规范作用,目的是为细胞内和细胞表面受体的复杂性提供更详细的视角。
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引用次数: 0
Diet-induced obesity and aging-induced upregulation of Trib3 interfere with energy homeostasis by downregulating the thermogenic capacity of BAT 饮食诱导的肥胖和衰老诱导的Trib3上调通过下调BAT的产热能力来干扰能量稳态。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-02 DOI: 10.1038/s12276-024-01361-5
Hyejin Yeo, Ji-Hye Lim, Ji Eom, MinJeong Kim, Hyeji Kwon, Sang-Wook Kang, Youngsup Song
Characterized by UCP1 expression and abundant mitochondria, brown adipose tissue (BAT) plays a crucial role in energy balance by converting chemical energy into heat through the cost of ATP production. In this study, it was demonstrated that Trib3 is a critical determinant of BAT-mediated energy expenditure and whole-body energy homeostasis. Under 60% high-fat diet conditions, Trib3 expression in BAT was elevated. Mice deficient in Trib3 are resistant to diet-induced obesity and exhibit improved glucose homeostasis due to enhanced BAT activity. Furthermore, brown adipocyte progenitor cells (APCs) lacking Trib3 exhibited increased proliferation and promoted brown adipocyte differentiation and mitochondrial biogenesis, contributing to the increase in the maximal thermogenic capacity of BAT in Trib3-deficient mice. Mechanistically, it was discovered that Trib3 expression is upregulated by free fatty acids at the transcriptional level and synergistically upregulated by DAG-PKC at the posttranslational level. This occurs through the modulation of COP1-mediated Trib3 protein turnover. Interestingly, the level of Trib3 expression in BAT increased with age. Trib3 knockout mice were protected from aging-related weight gain and impaired glucose homeostasis. These results suggest that Trib3 acts as an obesity- and aging-associated factor that negatively regulates BAT activity and that the loss of Trib3 may provide a beneficial approach to prevent obesity and aging-associated metabolic syndrome by increasing the thermogenic capacity of BAT. The study investigates how the Trib3 gene influences energy balance and obesity. Researchers discovered that Trib3 knockout mice, which lack the Trib3 gene, are resistant to diet and aging-induced obesity. This study fills a gap in understanding Trib3’s role in brown adipose tissue, a type of fat that generates heat. Researchers conducted experiments on Trib3 KO mice to examine their resistance to obesity using methods like glucose tolerance tests, indirect calorimetry, and PET imaging to analyze the mice. Results showed that Trib3 KO mice had lower body weight and better glucose metabolism compared to control mice. They concluded that Trib3 KO mice have increased energy expenditure due to enhanced BAT activity. This suggests that targeting Trib3 could help treat obesity and related metabolic disorders. Future research could explore Trib3’s role in other tissues and its potential as a therapeutic target. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
棕色脂肪组织(BAT)以UCP1的表达和丰富的线粒体为特征,通过ATP的生产成本将化学能转化为热量,在能量平衡中起着至关重要的作用。在这项研究中,证明了Trib3是bat介导的能量消耗和全身能量稳态的关键决定因素。在60%高脂饮食条件下,BAT中Trib3表达升高。缺乏Trib3的小鼠对饮食引起的肥胖有抵抗力,并且由于BAT活性增强而表现出改善的葡萄糖稳态。此外,缺乏Trib3的棕色脂肪细胞祖细胞(APCs)增殖增加,促进棕色脂肪细胞分化和线粒体生物发生,导致Trib3缺乏小鼠BAT的最大产热能力增加。机制上,我们发现游离脂肪酸在转录水平上调Trib3的表达,DAG-PKC在翻译后水平协同上调Trib3的表达。这是通过调节cop1介导的Trib3蛋白周转而发生的。有趣的是,BAT中Trib3的表达水平随着年龄的增长而增加。Trib3基因敲除小鼠免受衰老相关的体重增加和葡萄糖稳态受损的影响。这些结果表明,Trib3是一种与肥胖和衰老相关的因子,可以负向调节BAT活性,而Trib3的缺失可能通过增加BAT的产热能力,为预防肥胖和衰老相关代谢综合征提供了有益的途径。
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引用次数: 0
EPRS1-mediated fibroblast activation and mitochondrial dysfunction promote kidney fibrosis eprs1介导的成纤维细胞活化和线粒体功能障碍促进肾纤维化。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-02 DOI: 10.1038/s12276-024-01360-6
Seung Seob Son, Hee Seul Jeong, Seong-Woo Lee, Eun Soo Lee, Jeong Geon Lee, Ji-Hye Lee, Jawoon Yi, Mi Ju Park, Min Sun Choi, Donghyeong Lee, Sin Young Choi, Jiheon Ha, Jeong Suk Kang, Nam-Jun Cho, Samel Park, Hyo-Wook Gil, Choon Hee Chung, Joon Seok Park, Myung Hee Kim, Jihwan Park, Eun Young Lee
Kidney fibrosis causes irreversible structural damage in chronic kidney disease and is characterized by aberrant extracellular matrix (ECM) accumulation. Although glutamyl-prolyl-tRNA synthetase 1 (EPRS1) is a crucial enzyme involved in proline-rich protein synthesis, its role in kidney fibrosis remains unclear. The present study revealed that EPRS1 expression levels were increased in the fibrotic kidneys of patients and mice, especially in fibroblasts and proximal tubular epithelial cells, on the basis of single-cell analysis and immunostaining of fibrotic kidneys. Moreover, C57BL/6 EPRS1tm1b heterozygous knockout (Eprs1+/−) and pharmacological EPRS1 inhibition with the first-in-class EPRS1 inhibitor DWN12088 protected against kidney fibrosis and dysfunction by preventing fibroblast activation and proximal tubular injury. Interestingly, in vitro assays demonstrated that EPRS1-mediated nontranslational pathways in addition to translational pathways under transforming growth factor β-treated conditions by phosphorylating SMAD family member 3 in fibroblasts and signal transducers and activators of transcription 3 in injured proximal tubules. EPRS1 knockdown and catalytic inhibition suppressed these pathways, preventing fibroblast activation, proliferation, and subsequent collagen production. Additionally, we revealed that EPRS1 caused mitochondrial damage in proximal tubules but that this damage was attenuated by EPRS1 inhibition. Our findings suggest that the EPRS1-mediated ECM accumulation induces kidney fibrosis via fibroblast activation and mitochondrial dysfunction. Therefore, targeting EPRS1 could be a potential therapeutic target for alleviating fibrotic injury in chronic kidney disease. Kidney fibrosis, a common result of chronic kidney disease, leads to irreversible kidney dysfunction. Researchers found that the enzyme EPRS1 plays a key role in this process. Researchers discovered elevated EPRS1 levels in fibrotic kidneys of both patients and mice. The study involved patients, mice, and in vitro cells such as NRK-49F, NIH3T3, and HK-2 cells. The researchers used multiple techniques, including immunohistochemistry, western blot, electron microscopy and single-cell RNA sequencing, to identify EPRS1’s role. They found that EPRS1 promotes fibrosis by activating fibroblasts and causing mitochondrial dysfunction. Single-cell RNA sequencing and western blotting identified the pathophysiological molecular pathways. Inhibiting EPRS1 by genetic and pharmacological methods reduced kidney fibrosis and improved function, suggesting it could be a new treatment for kidney fibrosis. Future research may explore EPRS1 inhibitors as potential therapies for chronic kidney disease. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
肾纤维化在慢性肾脏疾病中引起不可逆的结构损伤,其特征是异常的细胞外基质(ECM)积累。尽管谷氨酰脯氨酸trna合成酶1 (EPRS1)是参与富含脯氨酸的蛋白质合成的关键酶,但其在肾纤维化中的作用尚不清楚。本研究在纤维化肾脏单细胞分析和免疫染色的基础上发现,EPRS1在患者和小鼠的纤维化肾脏中表达水平升高,尤其是在成纤维细胞和近端小管上皮细胞中表达水平升高。此外,C57BL/6 EPRS1tm1b杂合敲除(Eprs1+/-)和Eprs1抑制剂DWN12088对Eprs1的药理学抑制通过防止成纤维细胞活化和近端肾小管损伤来保护肾脏纤维化和功能障碍。有趣的是,体外实验表明,在转化生长因子β处理的条件下,eprs1介导的非翻译途径除了翻译途径外,还通过磷酸化成纤维细胞中的SMAD家族成员3和损伤近端小管中的信号转导和转录激活因子3。EPRS1的敲除和催化抑制抑制了这些途径,阻止了成纤维细胞的激活、增殖和随后的胶原生成。此外,我们发现EPRS1引起近端小管的线粒体损伤,但这种损伤通过抑制EPRS1而减弱。我们的研究结果表明,eprs1介导的ECM积累通过成纤维细胞激活和线粒体功能障碍诱导肾纤维化。因此,靶向EPRS1可能是减轻慢性肾脏疾病纤维化损伤的潜在治疗靶点。
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引用次数: 0
ErbB4 precludes the occurrence of PTSD-like fear responses by supporting the bimodal activity of the central amygdala ErbB4通过支持中央杏仁核的双峰活动来排除ptsd样恐惧反应的发生。
IF 9.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-12-02 DOI: 10.1038/s12276-024-01365-1
Kibong Sung, Min-Jae Jeong, Taesik Yoo, Jung Hoon Jung, Sumin Kang, Jong-Yeon Yoo, Hyun Jin Kim, Kyunghyun Park, Jung Hyun Pyo, Hyun-Yong Lee, Noah Koo, Soo-Hee Choi, Joung-Hun Kim
Post-traumatic stress disorder (PTSD) often arises after exposure to traumatic events and is characterized by dysregulated fear responses. Although the associations of erb-b2 receptor tyrosine kinase 4 (ErbB4) with various neuropsychiatric diseases, including schizophrenia and bipolar disorder, have been widely examined, the physiological roles of ErbB4 in PTSD and fear responses remain unclear. Using Cre-dependent ErbB4 knockout (KO) mice, we observed that PTSD-like fear behaviors emerged in ErbB4-deficient mice, particularly in inhibitory neurons. Specifically, the loss of ErbB4 in somatostatin-expressing (SST+) neurons was sufficient to induce PTSD-like fear responses. We also adopted the CRISPR/Cas9 system for region-specific KO of ErbB4, which revealed that ErbB4 deletion in SST+ neurons of the lateral division of the amygdala (CeL) caused elevated anxiety and PTSD-like fear generalization. Consistent with its physiological role, ErbB4 expression was diminished in CeLSST neurons from mice that exhibited PTSD-like phenotypes. While fear On and Off cells identified in the CeL displayed distinct responses to conditioned and novel cues, as previously shown, the selectivity of those On and Off cells was compromised in SSTErbB4-/- and stressed mice, which displayed strong fear generalization. Therefore, the bimodal activity that CeL On/Off cells display is likely required for proper discrimination of fearful stimuli from ambient stimuli, which should be sustained by the presence of ErbB4. Taken together, our data substantiate the correlation between PTSD-like fear responses and ErbB4 expression in CeLSST neurons and further underscore the functional effects of ErbB4 in CeLSST neurons, supporting the bimodal responses of CeL neurons. Post-traumatic stress disorder is a mental health condition that can develop after experiencing traumatic events. Researchers tried to understand the biological basis of PTSD using animal models. The researchers investigated the role of a protein called ErbB4 in fear responses related to PTSD. They used mice to study how deleting ErbB4 in specific brain cells affects fear behavior. They focused on somatostatin(SST)-expressing neurons in a brain region called the central amygdala, which is involved in processing fear. The study involved genetic modification, behavioral tests, and in vivo recording to observe changes in fear responses. The findings showed that removing ErbB4 from SST+ neurons led to increased anxiety and generalized fear, like PTSD symptoms, with specific alteration of neuronal activity. This suggests that ErbB4 helps regulate fear responses, and its absence may contribute to PTSD-like behaviors. This summary was initially drafted using artificial intelligence, then revised and fact-checked by the author.
创伤后应激障碍(PTSD)通常在暴露于创伤性事件后出现,其特征是恐惧反应失调。尽管erb-b2受体酪氨酸激酶4 (ErbB4)与各种神经精神疾病(包括精神分裂症和双相情感障碍)的关联已被广泛研究,但ErbB4在创伤后应激障碍和恐惧反应中的生理作用仍不清楚。使用cre依赖性ErbB4敲除(KO)小鼠,我们观察到ErbB4缺陷小鼠出现了类似ptsd的恐惧行为,特别是在抑制性神经元中。具体来说,生长抑素表达(SST+)神经元中ErbB4的缺失足以诱导ptsd样恐惧反应。我们还采用CRISPR/Cas9系统对ErbB4的区域特异性KO进行了检测,结果显示,杏仁核外侧分裂(CeL) SST+神经元的ErbB4缺失导致焦虑升高和ptsd样恐惧泛化。与其生理作用一致,ErbB4在表现出ptsd样表型的小鼠CeLSST神经元中的表达减少。虽然在CeL中发现的恐惧开关细胞对条件和新线索表现出不同的反应,但如前所述,在SSTErbB4-/-和应激小鼠中,这些开关细胞的选择性受到损害,表现出强烈的恐惧泛化。因此,CeL On/Off细胞显示的双峰活动可能是正确区分恐惧刺激和环境刺激所必需的,这应该由ErbB4的存在来维持。综上所述,我们的数据证实了ptsd样恐惧反应与CeLSST神经元中ErbB4表达之间的相关性,并进一步强调了ErbB4在CeLSST神经元中的功能作用,支持了CeL神经元的双峰反应。
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Experimental and Molecular Medicine
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