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Electroanalytical Ventures at Nanoscale Interfaces Between Immiscible Liquids. 纳米级不混溶液体界面的电分析研究。
IF 8 2区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2016-06-15 DOI: 10.1146/annurev-anchem-071015-041415
D. Arrigan, Yang Liu
Ion transfer at the interface between immiscible electrolyte solutions offers many benefits to analytical chemistry, including the ability to detect nonredox active ionized analytes, to detect ions whose redox electrochemistry is accompanied by complications, and to separate ions based on electrocontrolled partition. Nanoscale miniaturization of such interfaces brings the benefits of enhanced mass transport, which in turn leads to improved analytical performance in areas such as sensitivity and limits of detection. This review discusses the development of such nanoscale interfaces between immiscible liquids and examines the analytical advances that have been made to date, including prospects for trace detection of ion concentrations.
不混溶电解质溶液界面上的离子转移为分析化学提供了许多好处,包括检测非氧化还原活性电离分析物的能力,检测氧化还原电化学伴随并发症的离子,以及基于电控分区分离离子的能力。这种界面的纳米级小型化带来了增强质量传递的好处,这反过来又导致了灵敏度和检测极限等领域的分析性能的提高。本文讨论了不混溶液体之间的纳米级界面的发展,并检查了迄今为止所取得的分析进展,包括离子浓度痕量检测的前景。
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引用次数: 11
Mass Spectrometry Applied to Bottom-Up Proteomics: Entering the High-Throughput Era for Hypothesis Testing. 质谱法应用于自下而上的蛋白质组学:进入假说检验的高通量时代。
IF 8 2区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2016-06-15 DOI: 10.1146/annurev-anchem-071015-041535
Ludovic C. Gillet, A. Leitner, R. Aebersold
Proteins constitute a key class of molecular components that perform essential biochemical reactions in living cells. Whether the aim is to extensively characterize a given protein or to perform high-throughput qualitative and quantitative analysis of the proteome content of a sample, liquid chromatography coupled to tandem mass spectrometry has become the technology of choice. In this review, we summarize the current state of mass spectrometry applied to bottom-up proteomics, the approach that focuses on analyzing peptides obtained from proteolytic digestion of proteins. With the recent advances in instrumentation and methodology, we show that the field is moving away from providing qualitative identification of long lists of proteins to delivering highly consistent and accurate quantification values for large numbers of proteins across large numbers of samples. We believe that this shift will have a profound impact for the field of proteomics and life science research in general.
蛋白质构成了在活细胞中执行基本生化反应的一类关键分子成分。无论目的是广泛表征给定蛋白质,还是对样品的蛋白质组含量进行高通量定性和定量分析,液相色谱耦合串联质谱法已成为首选技术。在这篇综述中,我们总结了质谱法应用于自下而上蛋白质组学的现状,这种方法主要用于分析蛋白质水解消化获得的肽。随着仪器和方法的最新进展,我们表明该领域正在从提供长蛋白质列表的定性鉴定转向为大量样品中的大量蛋白质提供高度一致和准确的定量值。我们相信这一转变将对蛋白质组学和生命科学研究领域产生深远的影响。
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引用次数: 243
Plant Molecular Farming: Much More than Medicines. 植物分子农业:远不止药物。
IF 5.9 2区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2016-06-12 Epub Date: 2016-03-30 DOI: 10.1146/annurev-anchem-071015-041706
Marc Tschofen, Dietmar Knopp, Elizabeth Hood, Eva Stöger

Plants have emerged as commercially relevant production systems for pharmaceutical and nonpharmaceutical products. Currently, the commercially available nonpharmaceutical products outnumber the medical products of plant molecular farming, reflecting the shorter development times and lower regulatory burden of the former. Nonpharmaceutical products benefit more from the low costs and greater scalability of plant production systems without incurring the high costs associated with downstream processing and purification of pharmaceuticals. In this review, we explore the areas where plant-based manufacturing can make the greatest impact, focusing on commercialized products such as antibodies, enzymes, and growth factors that are used as research-grade or diagnostic reagents, cosmetic ingredients, and biosensors or biocatalysts. An outlook is provided on high-volume, low-margin proteins such as industrial enzymes that can be applied as crude extracts or unprocessed plant tissues in the feed, biofuel, and papermaking industries.

植物已经成为医药和非医药产品的商业相关生产系统。目前,商业上可获得的非制药产品数量超过了植物分子农业的医疗产品,反映出前者的开发时间更短,监管负担更低。非制药产品更多地受益于工厂生产系统的低成本和更大的可扩展性,而不会产生与药物的下游加工和纯化相关的高成本。在这篇综述中,我们探索了植物制造可以产生最大影响的领域,重点是商业化产品,如抗体、酶和生长因子,这些产品被用作研究级或诊断试剂、化妆品成分以及生物传感器或生物催化剂。展望了可作为粗提取物或未加工植物组织应用于饲料、生物燃料和造纸行业的高产量、低利润蛋白质,如工业酶。
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引用次数: 0
Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation. 蛋白质基因组学:整合新一代测序和质谱技术,描述人类蛋白质组变异的特征。
IF 8 2区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2016-06-12 Epub Date: 2016-03-30 DOI: 10.1146/annurev-anchem-071015-041722
Gloria M Sheynkman, Michael R Shortreed, Anthony J Cesnik, Lloyd M Smith

Mass spectrometry-based proteomics has emerged as the leading method for detection, quantification, and characterization of proteins. Nearly all proteomic workflows rely on proteomic databases to identify peptides and proteins, but these databases typically contain a generic set of proteins that lack variations unique to a given sample, precluding their detection. Fortunately, proteogenomics enables the detection of such proteomic variations and can be defined, broadly, as the use of nucleotide sequences to generate candidate protein sequences for mass spectrometry database searching. Proteogenomics is experiencing heightened significance due to two developments: (a) advances in DNA sequencing technologies that have made complete sequencing of human genomes and transcriptomes routine, and (b) the unveiling of the tremendous complexity of the human proteome as expressed at the levels of genes, cells, tissues, individuals, and populations. We review here the field of human proteogenomics, with an emphasis on its history, current implementations, the types of proteomic variations it reveals, and several important applications.

基于质谱的蛋白质组学已成为检测、定量和表征蛋白质的主要方法。几乎所有的蛋白质组学工作流程都依赖于蛋白质组学数据库来识别肽和蛋白质,但这些数据库通常包含一组通用的蛋白质,缺乏特定样本特有的变异,因此无法对其进行检测。幸运的是,蛋白质基因组学能够检测此类蛋白质组变异,其广义定义是利用核苷酸序列生成候选蛋白质序列,供质谱数据库搜索使用。由于以下两个方面的发展,蛋白质组学正变得越来越重要:(a) DNA 测序技术的进步使人类基因组和转录组的完整测序成为例行公事,(b) 人类蛋白质组在基因、细胞、组织、个体和群体水平上的巨大复杂性被揭示出来。我们在此回顾人类蛋白质组学领域,重点是其历史、当前的实施情况、所揭示的蛋白质组变异类型以及几种重要的应用。
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引用次数: 0
Applications of Optical Microcavity Resonators in Analytical Chemistry. 光学微腔谐振器在分析化学中的应用。
IF 8 2区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2016-06-12 Epub Date: 2016-03-30 DOI: 10.1146/annurev-anchem-071015-041742
James H Wade, Ryan C Bailey

Optical resonator sensors are an emerging class of analytical technologies that use recirculating light confined within a microcavity to sensitively measure the surrounding environment. Bolstered by advances in microfabrication, these devices can be configured for a wide variety of chemical or biomolecular sensing applications. We begin with a brief description of optical resonator sensor operation, followed by discussions regarding sensor design, including different geometries, choices of material systems, methods of sensor interrogation, and new approaches to sensor operation. Throughout, key developments are highlighted, including advancements in biosensing and other applications of optical sensors. We discuss the potential of alternative sensing mechanisms and hybrid sensing devices for more sensitive and rapid analyses. We conclude with our perspective on the future of optical microcavity sensors and their promise as versatile detection elements within analytical chemistry.

光学谐振器传感器是一种新兴的分析技术,它使用限制在微腔内的循环光来灵敏地测量周围环境。由于微加工技术的进步,这些设备可以配置为各种各样的化学或生物分子传感应用。我们首先简要介绍了光学谐振器传感器的工作原理,然后讨论了传感器的设计,包括不同的几何形状、材料系统的选择、传感器的检测方法和传感器工作的新方法。在整个过程中,重点发展,包括生物传感和光学传感器的其他应用的进步。我们讨论了替代传感机制和混合传感装置的潜力,以获得更灵敏和快速的分析。最后,我们对光学微腔传感器的未来及其作为分析化学中多功能检测元件的前景进行了展望。
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引用次数: 52
Advances in Magnetic Resonance Imaging Contrast Agents for Biomarker Detection. 用于生物标记检测的磁共振成像对比剂的进展。
IF 8 2区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2016-06-12 Epub Date: 2016-03-30 DOI: 10.1146/annurev-anchem-071015-041514
Sanhita Sinharay, Mark D Pagel

Recent advances in magnetic resonance imaging (MRI) contrast agents have provided new capabilities for biomarker detection through molecular imaging. MRI contrast agents based on the T2 exchange mechanism have more recently expanded the armamentarium of agents for molecular imaging. Compared with T1 and T2* agents, T2 exchange agents have a slower chemical exchange rate, which improves the ability to design these MRI contrast agents with greater specificity for detecting the intended biomarker. MRI contrast agents that are detected through chemical exchange saturation transfer (CEST) have even slower chemical exchange rates. Another emerging class of MRI contrast agents uses hyperpolarized (13)C to detect the agent with outstanding sensitivity. These hyperpolarized (13)C agents can be used to track metabolism and monitor characteristics of the tissue microenvironment. Together, these various MRI contrast agents provide excellent opportunities to develop molecular imaging for biomarker detection.

磁共振成像(MRI)造影剂的最新进展为通过分子成像检测生物标记物提供了新的能力。基于 T2 交换机制的磁共振成像造影剂最近扩大了分子成像的制剂范围。与 T1 和 T2*造影剂相比,T2 交换造影剂的化学交换速率较慢,这就提高了设计这些磁共振成像造影剂的能力,使其具有更高的特异性来检测预期的生物标记物。通过化学交换饱和转移(CEST)检测的磁共振成像造影剂的化学交换率更慢。另一类新兴的核磁共振成像造影剂使用超极化 (13)C 来检测造影剂,灵敏度极高。这些超极化 (13)C 剂可用于跟踪新陈代谢和监测组织微环境的特征。这些不同的磁共振成像造影剂共同为开发用于生物标记物检测的分子成像提供了绝佳的机会。
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引用次数: 0
Molecular Plasmonics. 分子等离子。
IF 8 2区 化学 Q1 CHEMISTRY, ANALYTICAL Pub Date : 2016-01-01 DOI: 10.1146/annurev-anchem-071015-041612
Andrew J Wilson, K. Willets
In this review, we survey recent advances in the field of molecular plasmonics beyond the traditional sensing modality. Molecular plasmonics is explored in the context of the complex interaction between plasmon resonances and molecules and the ability of molecules to support plasmons self-consistently. First, spectroscopic changes induced by the interaction between molecular and plasmonic resonances are discussed, followed by examples of how tuning molecular properties leads to active molecular plasmonic systems. Next, the role of the position and polarizability of a molecular adsorbate on surface-enhanced Raman scattering signals is examined experimentally and theoretically. Finally, we introduce recent research focused on using molecules as plasmonic materials. Each of these examples is intended to highlight the role of molecules as integral components in coupled molecule-plasmon systems, as well as to show the diversity of applications in molecular plasmonics.
本文综述了分子等离子体学在传统传感模式之外的研究进展。分子等离子体是在等离子体共振和分子之间复杂的相互作用以及分子支持等离子体自洽的能力的背景下探索的。首先,讨论了分子和等离子体共振之间相互作用引起的光谱变化,然后举例说明了分子性质的调整如何导致活跃的分子等离子体系统。其次,通过实验和理论研究了分子吸附物的位置和极化率对表面增强拉曼散射信号的影响。最后,我们介绍了利用分子作为等离子体材料的最新研究。这些例子中的每一个都旨在突出分子作为耦合分子-等离子体系统中不可或缺的组成部分的作用,以及显示分子等离子体应用的多样性。
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引用次数: 3
期刊
Annual Review of Analytical Chemistry
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